Rroxscaffold_4G00299480
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
19421782 .. 19428811
7030 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00299480.1

Sequence Viewer

Length: 3189 bp
ATGACGCTCGGAGGGAACGAGACGGATAGGCTTGCATTGCTAGCCATCAAAGCTAACATACAGCACGATCCCAACCAGGTCATGAGCACGTGGAATGAGTCCATTCACTTCTGCTCGTGGTACGGTGTAACCTGCAGTCGAAGGCATCACCAGAGGGTCACAATGCTGGACCTCAAATCACAAGGCTTGTCCGGCTTCATATCCCCACACATAGGAAATCTAAGTTTCCTAAGGGAGATGTACCTATATAGCAATAACTTCACTCATGAAATTCCTCCAGAAATTGGGCGTTTGCGTAGGTTGCAGGTATTACATCTAGCTAATAATTCATTTACTGGCCATATTCCTACCAACATATCCAATTGCTTCAATCTTATCTATCTCAGTTTCGGGTTCAACAAGCTGATTGGTGAAATTCCTTCCCAACTCGGTTTCTTGTCTAAGCTTCAGACAATTGATTTCGACCATAATAATTTTACTGGAGAATTCCCTCCTTCCTTTGGGAATCTTTCATCTCTTACGCAGCTCGGTGCAACCGTTAACAACTTGGTGGGTAGCATCCCTACGTCTTTAGGGCAATTGAAAAAATTAACTTTCTTTTCGTTGGGCGGTAATATGTTGTCTGGTTCCATGCCTCCCTCCATTTTTAACCTATCTGCCATTGTTTCTTTTTCCATACTACAAAACCAAATTCAAGGAAATCTTCCCTTAAACTTCAGTGATGCTTTTCCAGTCATCAAGGTCTTTAGCATTTCGGGAAACAAATTTATTGGAGGCATTCCAGTGTCAATATCCAATGCAACAAGTCTAGTGTCCTTCGATGTCTCCCGGAACAATCTAACAGGACAAGTGCCCAGTTTGCTACTACTTCATAACCTCATGGTTTTCTCAGTTGCAGATAATCATCTTGGAAGTGGTAAAGATGGTGACTTGAGTTTTGTCTCGGAAATGATCAATGCCACACAATTAATGTGGGTGTTTTTAGCCTACAACAATTTCGGAGGGACATTGCCCACATCAGTATCCAATCTCTCAACCAATCTTGAACAGCTTTGGGTTCAAGGAAACAACCTACATGGTAGCATCCCAAAGTTAGGGAATCTTGTCAACTTGCAATCATTGTCTATGGAGGAAAACTCCTTCACAGGTAACATCCCCACTGACATTGGGAAGCTTATAAGGCTTGGGGCATTGTTTCTTAATAGCAACAAACTATCAGGGAGCCTTCCATCCTCTCTTGGAAATTTAACCATGTTAACCCTTCTTTACTTGCAAAGAAATAATCTTAATGGCACCATCCCTTTAAGCCTTGGGCAATGCCAGGGGTTACTAGAGTTGGATCTTTCTCAAAATAACATTGATGGCACAATACCCCAACAACTGCCTATTGGCCTCCCTTTTTTATCAATTTCTTTGAACTTGTCAAAAAATCACTTTTATGGTTCTCTCCCATTGGAGATAGGAAATTTGAAGAATCTAGGTGCATTGGATGTTTCAGACAACTTGTTATCTGGAGAACTTCCTCCTAGCCTCGGCAGTTGTAAGAGTTTAGAAGTCTTACACTTGCAAGGTAACTTATTCCATGGGCTCATTCCTTCATCTATGAGTGAGTTGAGAGGGATTCAAGATTTAGACCTTTCTCGCAACAATTTTTCAGGAGATATTCCACATTTCCTAGAGGGCCTTGGTAACTTGCAGAATCTGAATTTGTCCTTCAATGATTTTTGGGGAGCAGTACCAATTGGGGGTGTTTTTAAGAATGTAAGTGCCAGTTCAGTTGTGGGAAACATTGGGCTCTGCAGCGTCACTGCTAATCTTCAACTTCCTTTGTGCAAGTCTAAGGAGTCTACAGGAGGAGGATTGTCTCGTAGAATGAAAATAATGATCTCTTTAGTATCCGGGTTTACTCTTTTGGGAATTGTTGTGGTGATCTATATTCTATTTCGTTGTTCAAGAAAGAAAATGAAAGGAACTGAATTGAGCACTTTGGGGAACTCTATGTTGCAAGTTTCATATGCTAGTCTCCTAAACGCTACTAATGGGTTCTCTTCAACTAATTTAATTGGCATTGGCGCTTTTGGGTCCGTGTACAAAGGAATTCTTGATGATGATGCAGCTATTGTTGCTGTGAAGGTGTTTAACATGTTACATCGGGGTGCTTCTAAGAGTTTCATCTCCGAATGTGAGGCATTAAGAAACATCAGACATCGAAATCTGGTAAAGATTTTAACTGCATGCTCAAGTATTGATTTCAATGGCAATGATTTTAAGGCTCTTGTTTACGAGTTCATGGACAATGGGAGCTTAGAGGATTGGTTGCATCCATCTACTGGAACTGAAGAGCTACCAGAAGCACCCAAAAGTTTAAATCTAGTTCAAAGGGTCGACATCGCCATTGATGTTGCTAGTGCATTGGATTATCTTCACAACCACTGTGAAACACCGATTGTTCATTGTGATCTCAAGCCAAGTAATGTTCTTTTGGACAGTGATCTGACTGGACATGTTTCTGACTTTGGGCTGTCAAGGTTTCTAACAGCACCAACCACTAATGTGCCTGAAAATCAGTCAAGCTCCATTGGAATCAGAGGATCGGTTGGTTATGCTGCACCAGAGTATGGTATGGGAAGTGAGGTATCTGTGTATGGGGATGTCTACAGCTTTGGCATTCTTTTGTTAGAAATGTTTACTGGGAAGAGACCTACTGATCACATGTTCAGTGATGGCTTGAATCTTCATAATTATGTGAAGACAGCTCTCCCTGAATGTGTTTCAGAGATTTCAGAATCACTAGTTCTTCAAGAAGGCACCGCCAGTGTCGTTGAAGCTCATAGACAATTGAGTGTAACACCACAGAAAATTGAAGAGTGCTTGACTTTGATATTTGGAATTGGGATTGCATGTTCTACTGACTCCCCAACAAACCGAAAGGATATGAGTAATGTTGCAGCTGAATTGAAGTCCATTAGAGCTCTCCCTGAACATGTTTCGAAGATTTCAAAATCACTTGTTCTTCAAGGCACCGACAATGTTGCTGAAGCTCACTGCCAATTGAGTGTGAGAACACGGAAAATTGAAGAGTGCTTGACTTTGATATTTGGAATTGGGATTGCGTGTTCTACCGACTCCCCAACAAGTCGAAAGGATATCATTGACGTTGCACAAACTTCTTGGTTAAGAAGGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1062

Amino Acids

115.22

Weight (kDa)

6.06

Isoelectric Point (pI)

38.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 7 - 46 9.9e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 51 - 130 2e-06 Leucine-rich repeat region
LRR_14 PF23598 117 - 200 1.4e-06 Leucine-rich repeat region
LRR_14 PF23598 359 - 450 3.1e-06 Leucine-rich repeat region
LRR_14 PF23598 472 - 569 6.9e-09 Leucine-rich repeat region
LRR_8 PF13855 516 - 575 5.7e-08 Leucine rich repeat
Pkinase PF00069 684 - 909 8.2e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 686 - 906 6.2e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1178
Acc36I ACCTGC 2 cut(s) 140, 295
AccB1I GGYRCC 3 cut(s) 1292, 2807, 3020
AccB7I CCANNNNNTGG 3 cut(s) 284, 2330, 2618
AccI GTMKAC 3 cut(s) 1847, 2385, 2655
AciI CCGC 2 cut(s) 609, 2811
AclWI GGATC 3 cut(s) 62, 1347, 2599
AcoI YGGCCR 1 cut(s) 337
AcsI RAATTY 9 cut(s) 270, 414, 485, 690, 764, 1243, 1465, 1705, 2097
AcuI CTGAAG 4 cut(s) 431, 700, 2358, 3057
AcvI CACGTG 1 cut(s) 90
AfaI GTAC 4 cut(s) 122, 242, 1737, 2090
AfiI CCNNNNNNNGG 8 cut(s) 212, 284, 500, 1094, 1532, 1745, 2330, 2618
AflIII ACRYGT 4 cut(s) 2142, 2503, 2712, 2983
AhlI ACTAGT 1 cut(s) 2791
AjnI CCWGG 2 cut(s) 75, 1320
AleI CACNNNNGTG 1 cut(s) 2552
AloI GAACNNNNNNTCC 4 cut(s) 2887, 2919, 3100, 3132
Alw21I GWGCWC 3 cut(s) 89, 1985, 2974
Alw26I GTCTC 6 cut(s) 14, 829, 946, 1869, 2027, 2692
AlwI GGATC 3 cut(s) 62, 1347, 2599
AlwNI CAGNNNCTG 1 cut(s) 1702
AoxI GGCC 3 cut(s) 337, 1390, 1681
ApeKI GCWGC 5 cut(s) 523, 1800, 2114, 2606, 2948
ApoI RAATTY 9 cut(s) 270, 414, 485, 690, 764, 1243, 1465, 1705, 2097
ArsI GACNNNNNNTTYG 2 cut(s) 920, 952
AseI ATTAAT 1 cut(s) 968
AspLEI GCGC 1 cut(s) 2075
AspS9I GGNCC 3 cut(s) 169, 1681, 2082
AsuC2I CCSGG 2 cut(s) 829, 1900
AsuHPI GGTGA 4 cut(s) 140, 422, 938, 1939
AsuII TTCGAA 1 cut(s) 2990
AsuNHI GCTAGC 1 cut(s) 40
AvaII GGWCC 2 cut(s) 169, 2082
AxyI CCTNAGG 1 cut(s) 230
BaeGI GKGCMC 1 cut(s) 855
BaeI ACNNNNGTAYC 2 cut(s) 1005, 1038
BalI TGGCCA 1 cut(s) 339
BanI GGYRCC 3 cut(s) 1292, 2807, 3020
BanII GRGCYC 3 cut(s) 1590, 1797, 2974
BauI CACGAG 1 cut(s) 115
BbrPI CACGTG 1 cut(s) 90
BbsI GAAGAC 1 cut(s) 2756
Bbv12I GWGCWC 3 cut(s) 89, 1985, 2974
BbvI GCAGC 5 cut(s) 535, 1812, 2126, 2593, 2960
BccI CCATC 7 cut(s) 53, 917, 1237, 1304, 1355, 2332, 2717
BcgI CGANNNNNNTGC 2 cut(s) 3014, 3048
BciT130I CCWGG 2 cut(s) 77, 1322
BciVI GTATCC 2 cut(s) 1033, 1906
BclI TGATCA 2 cut(s) 951, 2707
BcnI CCSGG 2 cut(s) 829, 1900
BcoDI GTCTC 6 cut(s) 14, 829, 946, 1869, 2027, 2692
BcuI ACTAGT 1 cut(s) 2791
BfmI CTRYAG 4 cut(s) 133, 1798, 1848, 2656
BfoI RGCGCY 1 cut(s) 2076
BfuAI ACCTGC 2 cut(s) 140, 295
BfuI GTATCC 2 cut(s) 1033, 1906
BisI GCNGC 5 cut(s) 524, 1801, 2115, 2607, 2949
BlsI GCNGC 5 cut(s) 525, 1802, 2116, 2608, 2950
Bme1390I CCNGG 4 cut(s) 77, 829, 1322, 1900
Bme18I GGWCC 2 cut(s) 169, 2082
BmgT120I GGNCC 3 cut(s) 169, 1681, 2082
BmiI GGNNCC 6 cut(s) 628, 1223, 1294, 2083, 2809, 3022
BmrFI CCNGG 4 cut(s) 77, 829, 1322, 1900
BmrI ACTGGG 2 cut(s) 849, 2700
BmsI GCATC 6 cut(s) 154, 567, 712, 1092, 2101, 2329
BmtI GCTAGC 1 cut(s) 44
BmuI ACTGGG 2 cut(s) 849, 2700
BpiI GAAGAC 1 cut(s) 2756
BplI GAGNNNNNCTC 2 cut(s) 1121, 1153
BpmI CTGGAG 3 cut(s) 261, 501, 1533
Bpu14I TTCGAA 1 cut(s) 2990
BpuEI CTTGAG 3 cut(s) 952, 2224, 2447
BpuMI CCSGG 2 cut(s) 829, 1900
BsaAI YACGTR 1 cut(s) 90
BsaBI GATNNNNATC 1 cut(s) 903
BsaI GGTCTC 1 cut(s) 2692
BsaJI CCNNGG 5 cut(s) 1309, 1321, 1531, 1582, 1684
Bsc4I CCNNNNNNNGG 8 cut(s) 212, 284, 500, 1094, 1532, 1745, 2330, 2618
Bse21I CCTNAGG 1 cut(s) 230
Bse3DI GCAATG 4 cut(s) 35, 1007, 1322, 2266
Bse8I GATNNNNATC 1 cut(s) 903
BseBI CCWGG 2 cut(s) 77, 1322
BseDI CCNNGG 5 cut(s) 1309, 1321, 1531, 1582, 1684
BseGI GGATG 8 cut(s) 558, 1083, 1152, 1229, 1296, 1495, 2320, 2656
BseJI GATNNNNATC 1 cut(s) 903
BseLI CCNNNNNNNGG 8 cut(s) 212, 284, 500, 1094, 1532, 1745, 2330, 2618
BseMI GCAATG 4 cut(s) 35, 1007, 1322, 2266
BseMII CTCAG 2 cut(s) 397, 903
BseRI GAGGAG 1 cut(s) 1869
BseSI GKGCMC 1 cut(s) 855
BseXI GCAGC 5 cut(s) 535, 1812, 2126, 2593, 2960
BsgI GTGCAG 1 cut(s) 2592
BshFI GGCC 3 cut(s) 339, 1392, 1683
BshNI GGYRCC 3 cut(s) 1292, 2807, 3020
BsiHKAI GWGCWC 3 cut(s) 89, 1985, 2974
BsiSI CCGG 3 cut(s) 192, 829, 1899
BslFI GGGAC 1 cut(s) 1018
BslI CCNNNNNNNGG 8 cut(s) 212, 284, 500, 1094, 1532, 1745, 2330, 2618
BsmAI GTCTC 6 cut(s) 14, 829, 946, 1869, 2027, 2692
BsmBI CGTCTC 1 cut(s) 14
BsmFI GGGAC 1 cut(s) 1018
BsmI GAATGC 2 cut(s) 777, 2667
BsnI GGCC 3 cut(s) 339, 1392, 1683
Bso31I GGTCTC 1 cut(s) 2692
Bsp119I TTCGAA 1 cut(s) 2990
Bsp1286I GDGCHC 6 cut(s) 89, 855, 1590, 1797, 1985, 2974
Bsp1407I TGTACA 1 cut(s) 2088
Bsp143I GATC 9 cut(s) 67, 951, 1339, 1884, 1929, 2458, 2491, 2591, 2707
Bsp19I CCATGG 1 cut(s) 1582
BspACI CCGC 2 cut(s) 609, 2811
BspANI GGCC 3 cut(s) 339, 1392, 1683
BspCNI CTCAG 2 cut(s) 396, 902
BspHI TCATGA 2 cut(s) 81, 265
BspLI GGNNCC 6 cut(s) 628, 1223, 1294, 2083, 2809, 3022
BspMAI CTGCAG 2 cut(s) 137, 1802
BspMI ACCTGC 2 cut(s) 140, 295
BspOI GCTAGC 1 cut(s) 44
BspPI GGATC 3 cut(s) 62, 1347, 2599
BspQI GCTCTTC 1 cut(s) 2334
BspT104I TTCGAA 1 cut(s) 2990
BspT107I GGYRCC 3 cut(s) 1292, 2807, 3020
BspTNI GGTCTC 1 cut(s) 2692
BsrDI GCAATG 4 cut(s) 35, 1007, 1322, 2266
BsrGI TGTACA 1 cut(s) 2088
BssECI CCNNGG 5 cut(s) 1309, 1321, 1531, 1582, 1684
BssMI GATC 9 cut(s) 67, 951, 1339, 1884, 1929, 2458, 2491, 2591, 2707
BssSI CACGAG 1 cut(s) 115
BssT1I CCWWGG 3 cut(s) 1309, 1582, 1684
Bst2BI CACGAG 1 cut(s) 115
Bst2UI CCWGG 2 cut(s) 77, 1322
Bst4CI ACNGT 4 cut(s) 125, 538, 2435, 2489
Bst6I CTCTTC 5 cut(s) 2053, 2334, 2690, 2859, 3072
BstAUI TGTACA 1 cut(s) 2088
BstBAI YACGTR 1 cut(s) 90
BstBI TTCGAA 1 cut(s) 2990
BstC8I GCNNGC 3 cut(s) 33, 42, 2236
BstDEI CTNAG 8 cut(s) 221, 230, 383, 441, 889, 1839, 2163, 2305
BstDSI CCRYGG 1 cut(s) 1582
BstF5I GGATG 8 cut(s) 558, 1083, 1152, 1229, 1296, 1495, 2320, 2656
BstH2I RGCGCY 1 cut(s) 2076
BstHHI GCGC 1 cut(s) 2075
BstKTI GATC 9 cut(s) 70, 954, 1342, 1887, 1932, 2461, 2494, 2594, 2710
BstMAI GTCTC 6 cut(s) 14, 829, 946, 1869, 2027, 2692
BstMBI GATC 9 cut(s) 67, 951, 1339, 1884, 1929, 2458, 2491, 2591, 2707
BstMWI GCNNNNNNNGC 8 cut(s) 37, 41, 50, 192, 301, 859, 1180, 2123
BstNI CCWGG 2 cut(s) 77, 1322
BstNSI RCATGY 6 cut(s) 2146, 2238, 2507, 2716, 2904, 2987
BstSCI CCNGG 4 cut(s) 75, 827, 1320, 1898
BstSFI CTRYAG 4 cut(s) 133, 1798, 1848, 2656
BstSLI GKGCMC 1 cut(s) 855
BstV1I GCAGC 5 cut(s) 535, 1812, 2126, 2593, 2960
BstV2I GAAGAC 1 cut(s) 2756
BstX2I RGATCY 1 cut(s) 1339
BstYI RGATCY 1 cut(s) 1339
Bsu36I CCTNAGG 1 cut(s) 230
BsuI GTATCC 2 cut(s) 1033, 1906
BsuRI GGCC 3 cut(s) 339, 1392, 1683
BtgI CCRYGG 1 cut(s) 1582
BtgZI GCGATG 1 cut(s) 2374
BtsCI GGATG 8 cut(s) 558, 1083, 1152, 1229, 1296, 1495, 2320, 2656
BtsI GCAGTG 2 cut(s) 1806, 3043
BtsIMutI CAGTG 9 cut(s) 724, 789, 1158, 1806, 2431, 2494, 2725, 2821, 3043
BveI ACCTGC 2 cut(s) 140, 295
Cac8I GCNNGC 3 cut(s) 33, 42, 2236
CaiI CAGNNNCTG 1 cut(s) 1702
CciI TCATGA 2 cut(s) 81, 265
CfoI GCGC 1 cut(s) 2075
Cfr13I GGNCC 3 cut(s) 169, 1681, 2082
CseI GACGC 2 cut(s) 13, 1792
CsiI ACCWGGT 1 cut(s) 75
Csp6I GTAC 4 cut(s) 121, 241, 1736, 2089
CspCI CAANNNNNGTGG 4 cut(s) 953, 988, 1147, 1182
CviQI GTAC 4 cut(s) 121, 241, 1736, 2089
DdeI CTNAG 8 cut(s) 221, 230, 383, 441, 889, 1839, 2163, 2305
DpnI GATC 9 cut(s) 69, 953, 1341, 1886, 1931, 2460, 2493, 2593, 2709
DpnII GATC 9 cut(s) 67, 951, 1339, 1884, 1929, 2458, 2491, 2591, 2707
DraI TTTAAA 1 cut(s) 2367
EaeI YGGCCR 1 cut(s) 337
Eam1104I CTCTTC 5 cut(s) 2053, 2334, 2690, 2859, 3072
EarI CTCTTC 5 cut(s) 2053, 2334, 2690, 2859, 3072
Ecl136II GAGCTC 1 cut(s) 2972
Eco130I CCWWGG 3 cut(s) 1309, 1582, 1684
Eco24I GRGCYC 3 cut(s) 1590, 1797, 2974
Eco31I GGTCTC 1 cut(s) 2692
Eco32I GATATC 1 cut(s) 3148
Eco47I GGWCC 2 cut(s) 169, 2082
Eco53kI GAGCTC 1 cut(s) 2972
Eco57I CTGAAG 4 cut(s) 431, 700, 2358, 3057
Eco72I CACGTG 1 cut(s) 90
Eco81I CCTNAGG 1 cut(s) 230
EcoICRI GAGCTC 1 cut(s) 2972
EcoO109I RGGNCCY 1 cut(s) 1681
EcoRI GAATTC 2 cut(s) 485, 2097
EcoRII CCWGG 2 cut(s) 75, 1320
EcoRV GATATC 1 cut(s) 3148
EcoT14I CCWWGG 3 cut(s) 1309, 1582, 1684
EcoT38I GRGCYC 3 cut(s) 1590, 1797, 2974
ErhI CCWWGG 3 cut(s) 1309, 1582, 1684
Esp3I CGTCTC 1 cut(s) 14
FalI AAGNNNNNCTT 4 cut(s) 687, 719, 2085, 2117
FaqI GGGAC 1 cut(s) 1018
FauNDI CATATG 1 cut(s) 2014
FbaI TGATCA 2 cut(s) 951, 2707
FblI GTMKAC 3 cut(s) 1847, 2385, 2655
Fnu4HI GCNGC 5 cut(s) 524, 1801, 2115, 2607, 2949
FokI GGATG 8 cut(s) 545, 1070, 1139, 1216, 1283, 1502, 2307, 2663
FriOI GRGCYC 3 cut(s) 1590, 1797, 2974
Fsp4HI GCNGC 5 cut(s) 524, 1801, 2115, 2607, 2949
GlaI GCGC 1 cut(s) 2074
GluI GCNGC 5 cut(s) 524, 1801, 2115, 2607, 2949
GsuI CTGGAG 3 cut(s) 261, 501, 1533
HaeII RGCGCY 1 cut(s) 2076
HaeIII GGCC 3 cut(s) 339, 1392, 1683
HapII CCGG 3 cut(s) 192, 829, 1899
HgaI GACGC 2 cut(s) 13, 1792
HhaI GCGC 1 cut(s) 2075
Hin6I GCGC 1 cut(s) 2073
HinP1I GCGC 1 cut(s) 2073
HincII GTYRAC 4 cut(s) 541, 1108, 1257, 2386
HindII GTYRAC 4 cut(s) 541, 1108, 1257, 2386
HindIII AAGCTT 2 cut(s) 443, 1172
HpaI GTTAAC 2 cut(s) 541, 1257
HpaII CCGG 3 cut(s) 192, 829, 1899
HphI GGTGA 4 cut(s) 140, 422, 938, 1939
HpyCH4III ACNGT 4 cut(s) 125, 538, 2435, 2489
HpyCH4IV ACGT 3 cut(s) 89, 566, 3156
HpyF10VI GCNNNNNNNGC 8 cut(s) 37, 41, 50, 192, 301, 859, 1180, 2123
HpyF3I CTNAG 8 cut(s) 221, 230, 383, 441, 889, 1839, 2163, 2305
HpySE526I ACGT 3 cut(s) 89, 566, 3156
HspAI GCGC 1 cut(s) 2073
Ksp22I TGATCA 2 cut(s) 951, 2707
KspAI GTTAAC 2 cut(s) 541, 1257
Kzo9I GATC 9 cut(s) 67, 951, 1339, 1884, 1929, 2458, 2491, 2591, 2707
LguI GCTCTTC 1 cut(s) 2334
LmnI GCTCC 4 cut(s) 1221, 1730, 2301, 2579
Lsp1109I GCAGC 5 cut(s) 535, 1812, 2126, 2593, 2960
LweI GCATC 6 cut(s) 154, 567, 712, 1092, 2101, 2329
MabI ACCWGGT 1 cut(s) 75
MaeII ACGT 3 cut(s) 89, 566, 3156
MalI GATC 9 cut(s) 69, 953, 1341, 1886, 1931, 2460, 2493, 2593, 2709
MboI GATC 9 cut(s) 67, 951, 1339, 1884, 1929, 2458, 2491, 2591, 2707
MfeI CAATTG 6 cut(s) 361, 453, 578, 1740, 2837, 3050
MflI RGATCY 1 cut(s) 1339
MhlI GDGCHC 6 cut(s) 89, 855, 1590, 1797, 1985, 2974
MlsI TGGCCA 1 cut(s) 339
MluNI TGGCCA 1 cut(s) 339
MlyI GAGTC 4 cut(s) 107, 1853, 2906, 3119
MmeI TCCRAC 1 cut(s) 1317
Mox20I TGGCCA 1 cut(s) 339
MscI TGGCCA 1 cut(s) 339
MslI CAYNNNNRTG 5 cut(s) 782, 1437, 2154, 2552, 2742
Msp20I TGGCCA 1 cut(s) 339
MspA1I CMGCKG 1 cut(s) 2951
MspI CCGG 3 cut(s) 192, 829, 1899
MspR9I CCNGG 4 cut(s) 77, 829, 1322, 1900
MunI CAATTG 6 cut(s) 361, 453, 578, 1740, 2837, 3050
Mva1269I GAATGC 2 cut(s) 777, 2667
MvaI CCWGG 2 cut(s) 77, 1322
MwoI GCNNNNNNNGC 8 cut(s) 37, 41, 50, 192, 301, 859, 1180, 2123
NciI CCSGG 2 cut(s) 829, 1900
NcoI CCATGG 1 cut(s) 1582
NdeI CATATG 1 cut(s) 2014
NdeII GATC 9 cut(s) 67, 951, 1339, 1884, 1929, 2458, 2491, 2591, 2707
NheI GCTAGC 1 cut(s) 40
NlaIV GGNNCC 6 cut(s) 628, 1223, 1294, 2083, 2809, 3022
NmeAIII GCCGAG 1 cut(s) 1512
NmuCI GTSAC 3 cut(s) 157, 926, 1804
NspI RCATGY 6 cut(s) 2146, 2238, 2507, 2716, 2904, 2987
NspV TTCGAA 1 cut(s) 2990
OliI CACNNNNGTG 1 cut(s) 2552
PaeI GCATGC 1 cut(s) 2238
PagI TCATGA 2 cut(s) 81, 265
PciI ACATGT 4 cut(s) 2142, 2503, 2712, 2983
PciSI GCTCTTC 1 cut(s) 2334
PcsI WCGNNNNNNNCGW 2 cut(s) 15, 534
PctI GAATGC 2 cut(s) 777, 2667
PfeI GAWTC 8 cut(s) 505, 1099, 1474, 1621, 1699, 2583, 2731, 2786
PflMI CCANNNNNTGG 3 cut(s) 284, 2330, 2618
PfoI TCCNGGA 1 cut(s) 827
PkrI GCNGC 5 cut(s) 525, 1802, 2116, 2608, 2950
PleI GAGTC 4 cut(s) 106, 1852, 2906, 3119
PmaCI CACGTG 1 cut(s) 90
PmlI CACGTG 1 cut(s) 90
PpsI GAGTC 4 cut(s) 106, 1852, 2906, 3119
Ppu21I YACGTR 1 cut(s) 90
PscI ACATGT 4 cut(s) 2142, 2503, 2712, 2983
PshBI ATTAAT 1 cut(s) 968
PsiI TTATAA 1 cut(s) 1178
Psp124BI GAGCTC 1 cut(s) 2974
Psp6I CCWGG 2 cut(s) 75, 1320
PspCI CACGTG 1 cut(s) 90
PspGI CCWGG 2 cut(s) 75, 1320
PspN4I GGNNCC 6 cut(s) 628, 1223, 1294, 2083, 2809, 3022
PspPI GGNCC 3 cut(s) 169, 1681, 2082
PstI CTGCAG 2 cut(s) 137, 1802
PstNI CAGNNNCTG 1 cut(s) 1702
PsuI RGATCY 1 cut(s) 1339
PvuII CAGCTG 1 cut(s) 2951
RsaI GTAC 4 cut(s) 122, 242, 1737, 2090
RsaNI GTAC 4 cut(s) 121, 241, 1736, 2089
RseI CAYNNNNRTG 5 cut(s) 782, 1437, 2154, 2552, 2742
SacI GAGCTC 1 cut(s) 2974
SalI GTCGAC 1 cut(s) 2384
SapI GCTCTTC 1 cut(s) 2334
SatI GCNGC 5 cut(s) 524, 1801, 2115, 2607, 2949
Sau3AI GATC 9 cut(s) 67, 951, 1339, 1884, 1929, 2458, 2491, 2591, 2707
Sau96I GGNCC 3 cut(s) 169, 1681, 2082
SchI GAGTC 4 cut(s) 107, 1853, 2906, 3119
ScrFI CCNGG 4 cut(s) 77, 829, 1322, 1900
SduI GDGCHC 6 cut(s) 89, 855, 1590, 1797, 1985, 2974
SexAI ACCWGGT 1 cut(s) 75
SfaNI GCATC 6 cut(s) 154, 567, 712, 1092, 2101, 2329
SfcI CTRYAG 4 cut(s) 133, 1798, 1848, 2656
SfuI TTCGAA 1 cut(s) 2990
SinI GGWCC 2 cut(s) 169, 2082
SmiMI CAYNNNNRTG 5 cut(s) 782, 1437, 2154, 2552, 2742
SmlI CTYRAG 3 cut(s) 931, 2239, 2462
SmoI CTYRAG 3 cut(s) 931, 2239, 2462
SpeI ACTAGT 1 cut(s) 2791
SphI GCATGC 1 cut(s) 2238
SsiI CCGC 2 cut(s) 609, 2811
SstI GAGCTC 1 cut(s) 2974
StyD4I CCNGG 4 cut(s) 75, 827, 1320, 1898
StyI CCWWGG 3 cut(s) 1309, 1582, 1684
TaaI ACNGT 4 cut(s) 125, 538, 2435, 2489
TaiI ACGT 3 cut(s) 92, 569, 3159
TaqI TCGA 7 cut(s) 139, 462, 819, 2209, 2385, 2990, 3139
TatI WGTACW 1 cut(s) 2088
TfiI GAWTC 8 cut(s) 505, 1099, 1474, 1621, 1699, 2583, 2731, 2786
TscAI CASTG 9 cut(s) 724, 789, 1165, 1813, 2438, 2494, 2725, 2821, 3050
TseFI GTSAC 3 cut(s) 157, 926, 1804
TseI GCWGC 5 cut(s) 523, 1800, 2114, 2606, 2948
Tsp45I GTSAC 3 cut(s) 157, 926, 1804
TspGWI ACGGA 3 cut(s) 38, 2074, 3082
TspRI CASTG 9 cut(s) 724, 789, 1165, 1813, 2438, 2494, 2725, 2821, 3050
Van91I CCANNNNNTGG 3 cut(s) 284, 2330, 2618
VpaK11BI GGWCC 2 cut(s) 169, 2082
VspI ATTAAT 1 cut(s) 968
XapI RAATTY 9 cut(s) 270, 414, 485, 690, 764, 1243, 1465, 1705, 2097
XceI RCATGY 6 cut(s) 2146, 2238, 2507, 2716, 2904, 2987
XcmI CCANNNNNNNNNTGG 1 cut(s) 1777
XmiI GTMKAC 3 cut(s) 1847, 2385, 2655
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.