Rw1G011750
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
26253391 .. 26256802
3412 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G011750.1

Sequence Viewer

Length: 3087 bp
ATGGGAGTTTTGGTTGTGAAATTGGTTTTGATATACGCATTTTTTACTGCAATGTTCATTTTCTGTTCTAACTCCTTCATGCAACCAAACCATCCCTTAACCACTAAACCCGAAGGGAATGTGACGGATAGGCTGGCATTACTAGCAATCAAAGCTCAAATACAACACGATCCCAACCAGGTCACAAGCTCATGGAATGAATCCATTCATTTTTGCCAGTGGCACGGCATCACCTGCAGTCGACGACATGGTCAAAGGGTGACAAAGCTGGAGCTCGGGTCTCTAGCATTGGTGGGATCCATACCTCCACACATAGGAAATCTAAGCTTCTTAAGAGTGCTAAATCTCCAAAACAATAGCTTCACTCATCAAATTCCTCCTCAAATTGGGCATTTGCACAGATTGCAGGTATTGCATCTACGCAATAACTCACTTACTGGCACCATTCCTGCCAATATATCCAATTGCTTCGAACTCATCACTCTCTACCTTAGTGGAAACAATCTAGTGGGTAAAATTCCTCCCAAACTGAGTTCCTTGTCAAAGCTTCAGAGTTTTGTTTTGCAATACAATAATTTAACAGGAGAGATCCCACCTTCTTTAGGGAACCTTTCATCTCTCGAGGGGATTGGTTTTGGTTATAACAACTTAGAAGGAAGCATCCCTAGTTCTCTATGCCAGTTGAAAAAATTAACAATTTTCTCTTTGGCCATAAATAGGTTGTCTGGTGTCATCCCTTCCTGCATTTATAACCTCTCTGGTATAGTTCAATTCGAGGTATTAGTTAACCAAATTCAAGGAAGTCTTCCATCAAACTTGGGCGCTAAAGCTTTTCCCAACCTTCAAATCTTTTCCGTTGATGAGAATCAATTTACTGGAGCCATCCCTTGGTCAATATCCAATGCAACAAATCTTGTGTGGTTTCAATGTTCATCAAACAAACTCACTGGACAGATGCCAAATTTACGAAATCTTCATAACCTTGTGGTATTCAATGTCCAAGATAATAATCTTGGAAGCGGGACACATGGTCACTTGAGTTTTGTCTCAGAATTGATCAATGCCACACATCTAACTTGGTTGGGGTTCGGCGACAACAATTTTGGAGGAACGTTGCCCACATCAATATCTAATCTCTCAACCAATCTCCAAATGCTTTTTCTTCAAGGAAACCGCCTACAGGGAAGCATCCCAACTGGGTTAGGGAATCTTGTGAACTTGCAAGGACTATATATGAGCGAAAACAACTTCACAGGTAGCATCCCCACAGATATTGGGAAAGTTTTGAGGCTTGGGGCAATTAATCTTGGGAACAACAAATTATACGGGAGCATTCCATCTTCTCTTGGAAATTTAACAAAGTTAACCATTCTTCACTTGCCAGGAAATAATCTCACTGGCAGCATCCCTTCAAGCCTAGGAGAATGCCACGAGTTGCTAGACTTGGATCTTTCTCAAAATAACTTGGATGGCAGAATACCTCAACAATTACTTATTGGTCTCCTCTCTTTATCAATTTCTTTAAACTTGTCAACAAACCACTTTACCGGTTCCCTTCCCGTTGAGATTGGAAAGTTGAAGAATCTAGCTGCACTCGACGTTTCTTACAACATGTTATCAGCACAACTTCCTAGTAGCCTCGGTAGTTGTGAGAGTTTGGAAGTCCTACACTTACAAGGTAACTTTTTGGAAGGGCTCATTCCTTCATCTATGAAGGAATTGAGAGGGATTCGAGATTTAGACCTTTCACTCAATAATTTGTCAGGAGATATTCCACAGTTTTTCGAGCACTTTGGAAACCTGGAGAATCTAAACCTATCCTTTAATCAGTTTTGGGGAGTAGTACCAACAGACGGTGTTTTTAGGAATGCAAGTGCGACTTCAGTTGCTGGAAACACAAGACTCTGCGGCGGTATTGCTAATCTTCGACTTCCTGTGTGCAAGGTTAAAGAGTCTAAAGGAGGAGAATTGTCTGGTAGAATGAAGCTAATGATCCCTTTAATTTCCGGGTTCACTTTGTTGGGACTGGCTGTAGTGCTTGCTCTTTTCCTTCTTCGTAAGAAAAGGAAAGAAACTGAAGTAAGCACTTTTGAGAACTCCATCTTACAAGTTTCATATGCTACTCTTCTAAAAGCTACCGACGGGTTCACTTCAGCTAATTTGATTGGTGTGGGCGCTTTTGGGTCTGTTTACAAAGGAATTCTTGGGGATGATAGAATTGTTGTCGCTGTGAAGGTGCTTAACATGTTACACCAGGGAGCATCTAAGAGTTTCATTGCCGAATGTGAGGCATTGAGAAATATCAAGCATCGGAATCTGGTCAAGATCTTAACTGCATGTTCAAGTATTGATTTCAGTGGCAATGATTTCAAGGCTCTTGTTTACGAGTTCATGGAGAATGGTAGCTTAGAGGATTGGTTGCATCCATTCACCGGAAAGGAAAAGCTGATAGAAGCACCCAAAAGTTTAAGTCTTGTTCAGAGGCTCGACATTGCCATTGATATTGCTTGTGCATTGGATTATCTTCACAATTATTGTGAAACACCAATAGTTCATTGTGATCTCAAGCCAAGTAATGTTCTTTTGGACAAAGATTTGACTGGACATGTTTCCGACTTTGGCCTGGCAAGGTTTCTTTTGGAACCAACCAATGTTTCTAGAAATCAATCAAGCTCCATCGGAATCAGAGGATCGGTTGGCTATGCTGCTCCAGAGTATGGTATGGGAAGTGAGGTCTCAACATATGGGGATGTCTACAGCTTTGGCATTCTCTTGTTAGAAATGTTTACAAGGCAGAAACCCACTGATAACATGTTCAGTGATGGCTTCAATCTTCATTATTATGTGAAGACAGCTCTCCCTAAACGTGTTGCAGACATTGCAGATTCACTAATTCTTCAAGGAGGCAATATCAATGTTGAAGAATCTCACAACCTCTTGAGCTCGAGAGCACAGAAAATTGAAGAGTGCTTGACTTTGATATTTGGAATTGGAATTGCCTGTTCGGTTGAATCTCCAACAACCAGAAAGGATATCAGTGATGTTGCATCTGAATTGCACTCAATTAGGGGCAATCTTCTTGACTAG

Protein Analysis

1028

Amino Acids

111.87

Weight (kDa)

6.64

Isoelectric Point (pI)

31.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 42 - 80 9.7e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 103 - 237 2.5e-13 Leucine-rich repeat region
LRR_14 PF23598 316 - 485 1e-09 Leucine-rich repeat region
LRR_4 PF12799 381 - 421 9.2e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 472 - 605 1.3e-08 Leucine-rich repeat region
LRR_8 PF13855 552 - 611 1.4e-08 Leucine rich repeat
Pkinase PF00069 718 - 937 2.2e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 720 - 938 1e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 642, 750
AarI CACCTGC 1 cut(s) 242
AasI GACNNNNNNGTC 1 cut(s) 249
Acc36I ACCTGC 2 cut(s) 242, 397
AccB1I GGYRCC 1 cut(s) 440
AccB7I CCANNNNNTGG 2 cut(s) 888, 2717
AccI GTMKAC 2 cut(s) 241, 2754
AciI CCGC 4 cut(s) 1020, 1174, 1908, 1911
AclI AACGTT 1 cut(s) 1112
AclWI GGATC 7 cut(s) 164, 291, 304, 583, 1455, 1987, 2698
AcoI YGGCCR 1 cut(s) 708
AcsI RAATTY 6 cut(s) 372, 516, 792, 961, 1351, 2199
AcuI CTGAAG 4 cut(s) 533, 1866, 2097, 2136
AfaI GTAC 1 cut(s) 1845
AfiI CCNNNNNNNGG 9 cut(s) 314, 386, 602, 717, 888, 1180, 1853, 2432, 2717
AflII CTTAAG 1 cut(s) 331
AflIII ACRYGT 5 cut(s) 1611, 2244, 2605, 2811, 2866
AgeI ACCGGT 1 cut(s) 1547
AhdI GACNNNNNGTC 1 cut(s) 1029
AjnI CCWGG 5 cut(s) 177, 1381, 1800, 2253, 2622
AjuI GAANNNNNNNTTGG 4 cut(s) 1143, 1175, 2638, 2670
Alw21I GWGCWC 4 cut(s) 276, 1791, 2945, 2953
Alw26I GTCTC 4 cut(s) 285, 1051, 1505, 2740
AlwI GGATC 7 cut(s) 164, 291, 304, 583, 1455, 1987, 2698
AlwNI CAGNNNCTG 1 cut(s) 1889
Ama87I CYCGRG 3 cut(s) 275, 620, 2944
AoxI GGCC 2 cut(s) 708, 2620
ApeKI GCWGC 3 cut(s) 1401, 1589, 2705
ApoI RAATTY 6 cut(s) 372, 516, 792, 961, 1351, 2199
ArsI GACNNNNNNTTYG 2 cut(s) 1085, 1117
AseI ATTAAT 1 cut(s) 1302
AsiGI ACCGGT 1 cut(s) 1547
Asp700I GAANNNNTTC 1 cut(s) 204
AspA2I CCTAGG 1 cut(s) 1417
AspLEI GCGC 2 cut(s) 824, 2177
AsuC2I CCSGG 1 cut(s) 2008
AsuHPI GGTGA 3 cut(s) 223, 271, 2422
AsuII TTCGAA 1 cut(s) 471
AvaI CYCGRG 3 cut(s) 275, 620, 2944
AvrII CCTAGG 1 cut(s) 1417
BalI TGGCCA 1 cut(s) 710
BamHI GGATCC 1 cut(s) 296
BanI GGYRCC 1 cut(s) 440
BanII GRGCYC 3 cut(s) 276, 1698, 2945
BauI CACGAG 1 cut(s) 1430
BbsI GAAGAC 2 cut(s) 797, 2855
Bbv12I GWGCWC 4 cut(s) 276, 1791, 2945, 2953
BbvI GCAGC 3 cut(s) 1413, 1576, 2692
BccI CCATC 8 cut(s) 99, 817, 890, 1345, 1463, 2108, 2684, 2816
BceAI ACGGC 1 cut(s) 241
BciT130I CCWGG 5 cut(s) 179, 1383, 1802, 2255, 2624
BclI TGATCA 1 cut(s) 1056
BcnI CCSGG 1 cut(s) 2008
BcoDI GTCTC 4 cut(s) 285, 1051, 1505, 2740
BfmI CTRYAG 4 cut(s) 235, 1178, 2031, 2755
BfoI RGCGCY 2 cut(s) 825, 2178
BfrI CTTAAG 1 cut(s) 331
BfuAI ACCTGC 2 cut(s) 242, 397
BglII AGATCT 1 cut(s) 2325
BisI GCNGC 4 cut(s) 1402, 1590, 1909, 2706
BlnI CCTAGG 1 cut(s) 1417
BlsI GCNGC 4 cut(s) 1403, 1591, 1910, 2707
Bme1390I CCNGG 6 cut(s) 179, 1383, 1802, 2008, 2255, 2624
BmeRI GACNNNNNGTC 1 cut(s) 1029
BmeT110I CYCGRG 3 cut(s) 275, 620, 2944
BmiI GGNNCC 6 cut(s) 298, 442, 608, 880, 1552, 2643
BmrFI CCNGG 6 cut(s) 179, 1383, 1802, 2008, 2255, 2624
BmrI ACTGGG 1 cut(s) 1206
BmuI ACTGGG 1 cut(s) 1206
BpiI GAAGAC 2 cut(s) 797, 2855
BpmI CTGGAG 4 cut(s) 290, 897, 1823, 2694
Bpu14I TTCGAA 1 cut(s) 471
BpuEI CTTGAG 3 cut(s) 1057, 2549, 2959
BpuMI CCSGG 1 cut(s) 2008
BsaBI GATNNNNATC 2 cut(s) 864, 1008
BsaI GGTCTC 3 cut(s) 285, 1505, 2740
BsaJI CCNNGG 4 cut(s) 887, 1417, 1639, 2254
BsaWI WCCGGW 2 cut(s) 1547, 2432
BsaXI ACNNNNNCTCC 3 cut(s) 27, 263, 293
Bsc4I CCNNNNNNNGG 9 cut(s) 314, 386, 602, 717, 888, 1180, 1853, 2432, 2717
Bse118I RCCGGY 1 cut(s) 1547
Bse1I ACTGG 9 cut(s) 217, 442, 679, 880, 952, 1201, 1402, 2031, 2605
Bse3DI GCAATG 5 cut(s) 57, 2274, 2368, 2490, 2877
Bse8I GATNNNNATC 2 cut(s) 864, 1008
BseBI CCWGG 5 cut(s) 179, 1383, 1802, 2255, 2624
BseDI CCNNGG 4 cut(s) 887, 1417, 1639, 2254
BseJI GATNNNNATC 2 cut(s) 864, 1008
BseLI CCNNNNNNNGG 9 cut(s) 314, 386, 602, 717, 888, 1180, 1853, 2432, 2717
BseMI GCAATG 5 cut(s) 57, 2274, 2368, 2490, 2877
BseMII CTCAG 2 cut(s) 521, 1062
BseNI ACTGG 9 cut(s) 217, 442, 679, 880, 952, 1201, 1402, 2031, 2605
BseRI GAGGAG 3 cut(s) 369, 1493, 1977
BseXI GCAGC 3 cut(s) 1413, 1576, 2692
BsgI GTGCAG 1 cut(s) 1575
BshFI GGCC 2 cut(s) 710, 2622
BshNI GGYRCC 1 cut(s) 440
BshTI ACCGGT 1 cut(s) 1547
BsiHKAI GWGCWC 4 cut(s) 276, 1791, 2945, 2953
BsiHKCI CYCGRG 3 cut(s) 275, 620, 2944
BsiSI CCGG 3 cut(s) 1548, 2007, 2433
BslFI GGGAC 2 cut(s) 1036, 2037
BslI CCNNNNNNNGG 9 cut(s) 314, 386, 602, 717, 888, 1180, 1853, 2432, 2717
BsmAI GTCTC 4 cut(s) 285, 1051, 1505, 2740
BsmFI GGGAC 2 cut(s) 1036, 2037
BsmI GAATGC 4 cut(s) 1332, 1430, 1873, 2766
BsnI GGCC 2 cut(s) 710, 2622
Bso31I GGTCTC 3 cut(s) 285, 1505, 2740
BsoBI CYCGRG 3 cut(s) 275, 620, 2944
Bsp119I TTCGAA 1 cut(s) 471
Bsp1286I GDGCHC 5 cut(s) 276, 1698, 1791, 2945, 2953
Bsp143I GATC 9 cut(s) 169, 296, 588, 1056, 1447, 1992, 2325, 2560, 2690
BspACI CCGC 4 cut(s) 1020, 1174, 1908, 1911
BspANI GGCC 2 cut(s) 710, 2622
BspCNI CTCAG 2 cut(s) 522, 1061
BspLI GGNNCC 6 cut(s) 298, 442, 608, 880, 1552, 2643
BspMAI CTGCAG 1 cut(s) 239
BspMI ACCTGC 2 cut(s) 242, 397
BspPI GGATC 7 cut(s) 164, 291, 304, 583, 1455, 1987, 2698
BspT104I TTCGAA 1 cut(s) 471
BspT107I GGYRCC 1 cut(s) 440
BspTI CTTAAG 1 cut(s) 331
BspTNI GGTCTC 3 cut(s) 285, 1505, 2740
BsrDI GCAATG 5 cut(s) 57, 2274, 2368, 2490, 2877
BsrFI RCCGGY 1 cut(s) 1547
BsrI ACTGG 9 cut(s) 217, 442, 679, 880, 952, 1201, 1402, 2031, 2605
BssAI RCCGGY 1 cut(s) 1547
BssECI CCNNGG 4 cut(s) 887, 1417, 1639, 2254
BssMI GATC 9 cut(s) 169, 296, 588, 1056, 1447, 1992, 2325, 2560, 2690
BssSI CACGAG 1 cut(s) 1430
BssT1I CCWWGG 2 cut(s) 887, 1417
Bst2BI CACGAG 1 cut(s) 1430
Bst2UI CCWGG 5 cut(s) 179, 1383, 1802, 2255, 2624
Bst4CI ACNGT 2 cut(s) 1779, 1856
Bst6I CTCTTC 2 cut(s) 2130, 2958
BstAFI CTTAAG 1 cut(s) 331
BstAPI GCANNNNNTGC 4 cut(s) 234, 403, 412, 2879
BstBI TTCGAA 1 cut(s) 471
BstC8I GCNNGC 2 cut(s) 135, 2040
BstDEI CTNAG 7 cut(s) 323, 491, 530, 649, 1048, 2265, 2407
BstENI CCTNNNNNAGG 1 cut(s) 600
BstH2I RGCGCY 2 cut(s) 825, 2178
BstHHI GCGC 2 cut(s) 824, 2177
BstKTI GATC 9 cut(s) 172, 299, 591, 1059, 1450, 1995, 2328, 2563, 2693
BstMAI GTCTC 4 cut(s) 285, 1051, 1505, 2740
BstMBI GATC 9 cut(s) 169, 296, 588, 1056, 1447, 1992, 2325, 2560, 2690
BstMWI GCNNNNNNNGC 6 cut(s) 143, 152, 234, 403, 412, 2879
BstNI CCWGG 5 cut(s) 179, 1383, 1802, 2255, 2624
BstNSI RCATGY 5 cut(s) 1615, 2248, 2340, 2609, 2815
BstSCI CCNGG 6 cut(s) 177, 1381, 1800, 2006, 2253, 2622
BstSFI CTRYAG 4 cut(s) 235, 1178, 2031, 2755
BstV1I GCAGC 3 cut(s) 1413, 1576, 2692
BstV2I GAAGAC 2 cut(s) 797, 2855
BstX2I RGATCY 4 cut(s) 296, 588, 1447, 2325
BstYI RGATCY 4 cut(s) 296, 588, 1447, 2325
BsuRI GGCC 2 cut(s) 710, 2622
BtsIMutI CAGTG 7 cut(s) 224, 945, 1395, 2362, 2802, 2824, 3043
BveI ACCTGC 2 cut(s) 242, 397
Cac8I GCNNGC 2 cut(s) 135, 2040
CaiI CAGNNNCTG 1 cut(s) 1889
CfoI GCGC 2 cut(s) 824, 2177
Cfr10I RCCGGY 1 cut(s) 1547
CsiI ACCWGGT 1 cut(s) 177
Csp6I GTAC 1 cut(s) 1844
CspAI ACCGGT 1 cut(s) 1547
CspCI CAANNNNNGTGG 2 cut(s) 1255, 1290
CviQI GTAC 1 cut(s) 1844
DdeI CTNAG 7 cut(s) 323, 491, 530, 649, 1048, 2265, 2407
DpnI GATC 9 cut(s) 171, 298, 590, 1058, 1449, 1994, 2327, 2562, 2692
DpnII GATC 9 cut(s) 169, 296, 588, 1056, 1447, 1992, 2325, 2560, 2690
DraI TTTAAA 1 cut(s) 1524
DrdI GACNNNNNNGTC 1 cut(s) 249
DriI GACNNNNNGTC 1 cut(s) 1029
DseDI GACNNNNNNGTC 1 cut(s) 249
EaeI YGGCCR 1 cut(s) 708
Eam1104I CTCTTC 2 cut(s) 2130, 2958
Eam1105I GACNNNNNGTC 1 cut(s) 1029
EarI CTCTTC 2 cut(s) 2130, 2958
Ecl136II GAGCTC 2 cut(s) 274, 2943
Eco130I CCWWGG 2 cut(s) 887, 1417
Eco24I GRGCYC 3 cut(s) 276, 1698, 2945
Eco31I GGTCTC 3 cut(s) 285, 1505, 2740
Eco32I GATATC 1 cut(s) 3034
Eco53kI GAGCTC 2 cut(s) 274, 2943
Eco57I CTGAAG 4 cut(s) 533, 1866, 2097, 2136
Eco88I CYCGRG 3 cut(s) 275, 620, 2944
EcoICRI GAGCTC 2 cut(s) 274, 2943
EcoNI CCTNNNNNAGG 1 cut(s) 600
EcoRI GAATTC 1 cut(s) 2199
EcoRII CCWGG 5 cut(s) 177, 1381, 1800, 2253, 2622
EcoRV GATATC 1 cut(s) 3034
EcoT14I CCWWGG 2 cut(s) 887, 1417
EcoT38I GRGCYC 3 cut(s) 276, 1698, 2945
ErhI CCWWGG 2 cut(s) 887, 1417
FalI AAGNNNNNCTT 6 cut(s) 789, 821, 1864, 1896, 2187, 2219
FaqI GGGAC 2 cut(s) 1036, 2037
FauI CCCGC 1 cut(s) 1013
FauNDI CATATG 2 cut(s) 2116, 2743
FbaI TGATCA 1 cut(s) 1056
FblI GTMKAC 2 cut(s) 241, 2754
Fnu4HI GCNGC 4 cut(s) 1402, 1590, 1909, 2706
FriOI GRGCYC 3 cut(s) 276, 1698, 2945
Fsp4HI GCNGC 4 cut(s) 1402, 1590, 1909, 2706
GlaI GCGC 2 cut(s) 823, 2176
GluI GCNGC 4 cut(s) 1402, 1590, 1909, 2706
GsuI CTGGAG 4 cut(s) 290, 897, 1823, 2694
HaeII RGCGCY 2 cut(s) 825, 2178
HaeIII GGCC 2 cut(s) 710, 2622
HapII CCGG 3 cut(s) 1548, 2007, 2433
HhaI GCGC 2 cut(s) 824, 2177
Hin6I GCGC 2 cut(s) 822, 2175
HinP1I GCGC 2 cut(s) 822, 2175
HincII GTYRAC 4 cut(s) 242, 787, 1365, 1533
HindII GTYRAC 4 cut(s) 242, 787, 1365, 1533
HindIII AAGCTT 3 cut(s) 325, 545, 828
HpaI GTTAAC 2 cut(s) 787, 1365
HpaII CCGG 3 cut(s) 1548, 2007, 2433
HphI GGTGA 3 cut(s) 223, 271, 2422
Hpy188I TCNGA 8 cut(s) 552, 1051, 2313, 2481, 2614, 2681, 2687, 3052
Hpy188III TCNNGA 9 cut(s) 620, 1733, 1764, 2323, 2658, 2711, 2938, 2946, 3080
Hpy99I CGWCG 3 cut(s) 246, 1601, 2144
HpyCH4III ACNGT 2 cut(s) 1779, 1856
HpyCH4IV ACGT 3 cut(s) 1112, 1599, 2866
HpyF10VI GCNNNNNNNGC 6 cut(s) 143, 152, 234, 403, 412, 2879
HpyF3I CTNAG 7 cut(s) 323, 491, 530, 649, 1048, 2265, 2407
HpySE526I ACGT 3 cut(s) 1112, 1599, 2866
HspAI GCGC 2 cut(s) 822, 2175
Ksp22I TGATCA 1 cut(s) 1056
KspAI GTTAAC 2 cut(s) 787, 1365
Kzo9I GATC 9 cut(s) 169, 296, 588, 1056, 1447, 1992, 2325, 2560, 2690
LmnI GCTCC 6 cut(s) 271, 878, 1329, 2258, 2678, 2713
Lsp1109I GCAGC 3 cut(s) 1413, 1576, 2692
MabI ACCWGGT 1 cut(s) 177
MaeII ACGT 3 cut(s) 1112, 1599, 2866
MaeIII GTNAC 6 cut(s) 121, 181, 259, 1031, 1679, 2247
MalI GATC 9 cut(s) 171, 298, 590, 1058, 1449, 1994, 2327, 2562, 2692
MboI GATC 9 cut(s) 169, 296, 588, 1056, 1447, 1992, 2325, 2560, 2690
MfeI CAATTG 1 cut(s) 463
MflI RGATCY 4 cut(s) 296, 588, 1447, 2325
MhlI GDGCHC 5 cut(s) 276, 1698, 1791, 2945, 2953
MlsI TGGCCA 1 cut(s) 710
MluNI TGGCCA 1 cut(s) 710
MlyI GAGTC 2 cut(s) 1896, 1961
MmeI TCCRAC 2 cut(s) 2637, 3041
Mox20I TGGCCA 1 cut(s) 710
MroXI GAANNNNTTC 1 cut(s) 204
MscI TGGCCA 1 cut(s) 710
MslI CAYNNNNRTG 1 cut(s) 2841
Msp20I TGGCCA 1 cut(s) 710
MspCI CTTAAG 1 cut(s) 331
MspI CCGG 3 cut(s) 1548, 2007, 2433
MspR9I CCNGG 6 cut(s) 179, 1383, 1802, 2008, 2255, 2624
MunI CAATTG 1 cut(s) 463
Mva1269I GAATGC 4 cut(s) 1332, 1430, 1873, 2766
MvaI CCWGG 5 cut(s) 179, 1383, 1802, 2255, 2624
MwoI GCNNNNNNNGC 6 cut(s) 143, 152, 234, 403, 412, 2879
NciI CCSGG 1 cut(s) 2008
NdeI CATATG 2 cut(s) 2116, 2743
NdeII GATC 9 cut(s) 169, 296, 588, 1056, 1447, 1992, 2325, 2560, 2690
NlaIV GGNNCC 6 cut(s) 298, 442, 608, 880, 1552, 2643
NmuCI GTSAC 4 cut(s) 121, 181, 259, 1031
NspI RCATGY 5 cut(s) 1615, 2248, 2340, 2609, 2815
NspV TTCGAA 1 cut(s) 471
PaeR7I CTCGAG 2 cut(s) 620, 2944
PaqCI CACCTGC 1 cut(s) 242
PciI ACATGT 4 cut(s) 1611, 2244, 2605, 2811
PctI GAATGC 4 cut(s) 1332, 1430, 1873, 2766
PdmI GAANNNNTTC 1 cut(s) 204
PflFI GACNNNGTC 1 cut(s) 249
PflMI CCANNNNNTGG 2 cut(s) 888, 2717
PinAI ACCGGT 1 cut(s) 1547
PkrI GCNGC 4 cut(s) 1403, 1591, 1910, 2707
PleI GAGTC 2 cut(s) 1896, 1960
PpsI GAGTC 2 cut(s) 1896, 1960
PscI ACATGT 4 cut(s) 1611, 2244, 2605, 2811
PshBI ATTAAT 1 cut(s) 1302
PsiI TTATAA 2 cut(s) 642, 750
Psp124BI GAGCTC 2 cut(s) 276, 2945
Psp1406I AACGTT 1 cut(s) 1112
Psp6I CCWGG 5 cut(s) 177, 1381, 1800, 2253, 2622
PspGI CCWGG 5 cut(s) 177, 1381, 1800, 2253, 2622
PspN4I GGNNCC 6 cut(s) 298, 442, 608, 880, 1552, 2643
PstI CTGCAG 1 cut(s) 239
PstNI CAGNNNCTG 1 cut(s) 1889
PsuI RGATCY 4 cut(s) 296, 588, 1447, 2325
PsyI GACNNNGTC 1 cut(s) 249
RsaI GTAC 1 cut(s) 1845
RsaNI GTAC 1 cut(s) 1844
RseI CAYNNNNRTG 1 cut(s) 2841
SacI GAGCTC 2 cut(s) 276, 2945
SalI GTCGAC 1 cut(s) 240
SatI GCNGC 4 cut(s) 1402, 1590, 1909, 2706
Sau3AI GATC 9 cut(s) 169, 296, 588, 1056, 1447, 1992, 2325, 2560, 2690
SchI GAGTC 2 cut(s) 1896, 1961
ScrFI CCNGG 6 cut(s) 179, 1383, 1802, 2008, 2255, 2624
SduI GDGCHC 5 cut(s) 276, 1698, 1791, 2945, 2953
SexAI ACCWGGT 1 cut(s) 177
SfcI CTRYAG 4 cut(s) 235, 1178, 2031, 2755
Sfr274I CTCGAG 2 cut(s) 620, 2944
SfuI TTCGAA 1 cut(s) 471
SlaI CTCGAG 2 cut(s) 620, 2944
SmiMI CAYNNNNRTG 1 cut(s) 2841
SmlI CTYRAG 6 cut(s) 331, 620, 1036, 2564, 2938, 2944
SmoI CTYRAG 6 cut(s) 331, 620, 1036, 2564, 2938, 2944
SsiI CCGC 4 cut(s) 1020, 1174, 1908, 1911
SstI GAGCTC 2 cut(s) 276, 2945
StyD4I CCNGG 6 cut(s) 177, 1381, 1800, 2006, 2253, 2622
StyI CCWWGG 2 cut(s) 887, 1417
TaaI ACNGT 2 cut(s) 1779, 1856
TaiI ACGT 3 cut(s) 1115, 1602, 2869
TauI GCSGC 1 cut(s) 1911
TscAI CASTG 7 cut(s) 224, 952, 1402, 2362, 2809, 2824, 3043
TseFI GTSAC 4 cut(s) 121, 181, 259, 1031
TseI GCWGC 3 cut(s) 1401, 1589, 2705
Tsp45I GTSAC 4 cut(s) 121, 181, 259, 1031
TspGWI ACGGA 2 cut(s) 140, 844
TspRI CASTG 7 cut(s) 224, 952, 1402, 2362, 2809, 2824, 3043
Tth111I GACNNNGTC 1 cut(s) 249
Van91I CCANNNNNTGG 2 cut(s) 888, 2717
Vha464I CTTAAG 1 cut(s) 331
VspI ATTAAT 1 cut(s) 1302
XagI CCTNNNNNAGG 1 cut(s) 600
XapI RAATTY 6 cut(s) 372, 516, 792, 961, 1351, 2199
XbaI TCTAGA 1 cut(s) 2657
XceI RCATGY 5 cut(s) 1615, 2248, 2340, 2609, 2815
XhoI CTCGAG 2 cut(s) 620, 2944
XmaJI CCTAGG 1 cut(s) 1417
XmiI GTMKAC 2 cut(s) 241, 2754
XmnI GAANNNNTTC 1 cut(s) 204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.