Rroxscaffold_4G00314420
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
38398464 .. 38401993
3530 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00314420.1

Sequence Viewer

Length: 3282 bp
ATGGAGATCTTATCCATGGGTGTGAGGATTTGGTCAGTAGTCATGCAACTGTTTCCCCTGATGATCATCACTTTGGCCTCTTCAAATCTGAGAGGAAATGAGGTGGAAAGACTATCCTTGCTTGCCTTTAAATCTGAAGTAGTCAGTGATCCTCTGGGCATCCTTAGCTCCTGGAATGATTCCTCCAACTTATGTGATGAGTGGCGAGGGATTATTTGCGGCCGAAGACACCAGCGAGTCACGGTTCTGGACCTCCAATCCAGCCAGCTGGAGGGTATTCTATGTCCACACATCGGAAACTTGAGCTTTCTCAGGACATTAAATCTCCAAAACAATAACTTCACCGGCACCATCCCTCAAGAAATTGGTCGATTATCCCGGCTGCAACGATTACACCTCGGGGACAACTCATTCGAAGGTGATATCCCCATCAATATATCTCATTGTTTTAATCTCCAATATCTTGTCTTGGCTAATAACACTCTTAGTGGGAAACTTCCAATGGTACTTGGCTCATTGTTCAAGCTTCAAGTACTTACTTTGCGTAGGAACAAATTAGTTGGGGAAATTCCATCTTCTTTTGGAAATCTTTCTTCCCTTCAGTCTCTTTCTGTGGAAGAAAATAATCTGTATGGTGGTCTCATGAATAGCCGCCTTGGGGAATTGAAAAGCTTAAGATATCTTGCATTGGGTACAAATAGATTGACTGGTACCATCCCTCTCTCCATATACAACCTTTCTTCCATTGAACACATTTCTGTGATTGGAAACCAATTTCATGGAACTCTTCCTTCTGGGTTGGGCTGCACAATATTTCCAAACCTTCAAGCCTTTCATTTCCAAATGAACAGATTCAGCGGACCAATTCCATTTACAATCTCAAACGCATCCCACCTTTCACAGTTTTTGATCTCTAATAATAATTTTACCGGAAAAGTTCCTAGTCTGGCAAGAGTTTCCAATCTGTTTCGGTTGGAAATGGGTGATAATAATCTTATAAATGAGGATGGTGACTTGGATTTTCTCTCTTCTCTGGTTAATTGTACCAATTTAGAACGTGTAAATATTAGTGGGAATAATTTTCAAGGAGTGCTACCTGAATCTATCAGCAATTTCTCAAGAAAGCTCAAGGTAATGAGCTTAGGAAGGAATCAGCTACGTGGAAGCATTCCCACAGGGATAGGAAATTTCATCAACTTGTTTGAATTGAGCTTCGAGGAAAACCTATTGAGGGGCCCTATACCGAGCTCAATATGTAAGCCAAGTAAACTGTACAATCTGCTTATAAACCATAATCAGTTATCAGGTTCTATCCCATCTTGTTTGGGAAATCTAACTTTGTTAAGCAGATTAGATCTCATGTCAAACAACTTAAAAGGAGGCATACCAAAAAGTCTTGGTCGATGCAAGTATTTGCAATCTTTGGTTCTTTCTCAAAATAAACTCAACGGTTCTATTCCGCAAGAAGTCATCGGTTCATCAGCTTTATCACAAGTTTTGGATTTGGATTTATCCAATAACCAATTTACTGGTAACATTCCCATTGAAGTAGGTTCTTTGTCTAATCTTGCTTCTTTGAATCTTTCTGGAAATAGGTTATCTGGTGAGATTCCAGCAGAAAGCTTAAGGGGATGCGGACAATTGAAAAGTTTGGACCTCTCTCGTAACAACTTTTCAGGAACAATTCTTGATTATTTGCCGAATTTAACCTTGCAGAATTTAGACCTCTCTCGTAACAACTTTTCAGGAACAATTCCTGATTATTTGTTGCGCGTCTGGCAGAATTTAGACCTCTCATTTAATGATTTTGAAGGTGAAGTACCAAATGAAGGAGTTTTCAGGAATACAAGTGCGGTTTCCCTCATGGGAAACAAAAGACTTTGTGGAGGTGTACCTCAGTTGAACTTGCCTAAATGTATCTCCAATCGATCTAACTCAAATTCCAATCTATCCAATTCAAATAAGCCAAAATCATTTTCCAAGTTGAAACCAATTATCTCATTCTTTTGTGGGGTAATTGGAGTTTTCTTAGTGGCGGCCGTGTGCTTTGTGCTCCTCTATAGATCAAGAAAAGCAAGAGTTGAGCTAAGAAAAGCAAGAGTTGAGCCAAGAAAAGCAAGAGTTGAGCGAAGAAAAGCAAGAGTTGAGCGAAGAAAAGCAAGAGTTGAGCTAAGAAAAGCAAGAGTACTTGAGCCAAGAAAAGCAAGAGTTCAGTCAACTTCAGAACTATCATTGGATATTTCATTCTTAAAGTTGTCATATGGAGATCTACTTCAAGCAACTGATGGGTTCTCTTCTTGGAATTTGATTGGTGCTGGTAGTTCTGGTTCTGTGTACTGGGGAGTTCTCAATCAGCCAAAAGAAAGAATTGTTGCCGTCAAAGTACTCAATCTTCAAAAGGCAACTACTGCTAATAGTTTCATAGCTGAATGTCAATTCTTGAAAAACATTAGGCACCGAAATCTTGTCAAACTAGTGACTGCTTGCTCAAGTATTGATTTTCAAGGAAATGAGTTCAAAGCTTTGGTTTTTGAGTACATGATGCATGGAAATCTAGATGAGTGGCTGCATGATTCAGCTGACAGAGTTGTTGAGCTACCCATTGTGGAGGTGCATTTGAATCTTATCCAAAGGGTAACTATTGCCATTGACATAGCTAGTGCTTTGGATTATTTGCACAATTATTTTCACATCCCAATAGTTCATTGTGATTTAAAGCCCAGTAATGTTCTCTTAGAAAAAGGCATGACTGCCTGTGTTTGTGACTTTGGTTTGGCAAGTTACCTCCCAAACACTTCTTGTCCGGTTTCTTCACTAGAACGCACTTCCAATTCAATAATGGGTTCCATTGGCTATATTGCCCCAGAGTACGGCATGGGAAATGAGGTGTCAACCTACGGAGACGTGTATAGCTATGGAATCCTATTACTGGAGATGCTTACTGGTAAGAGGCCAACAGATGATATGTTTGCAGATGACATGAACTTGCACAATTTTGTGCTGATGGCTTTGCCTGAACGTGTGAAAGAAATATGTGATCCGGTGCTTCTTCAAGGACAAGAAAGCAGCACTAGTACAAATCCCACAAGCACTAGGAATAATGTCCAAAATGAAACATACAGAGTTGAAGAGTGCCTTATTTCCATTGCTAGGATAGGAGTTGCTTGTTCGGCGCAATTGCCCAAAGAGCGAATGGAGATTGGGAAAGTTTTAGCAGAACTACGTGTAATCATGGATGTACTGACTGGAACCAGGAGTCCAGGATGCCTAGAGAGAACATGA

Protein Analysis

1093

Amino Acids

120.94

Weight (kDa)

8.8

Isoelectric Point (pI)

37.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 73 2e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 78 - 138 1.2e-06 Leucine-rich repeat region
LRR_14 PF23598 146 - 208 4.9e-07 Leucine-rich repeat region
LRR_8 PF13855 502 - 558 2.6e-06 Leucine rich repeat
Pkinase PF00069 768 - 991 8e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 769 - 994 5.1e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 998, 1286
Acc65I GGTACC 1 cut(s) 710
AccB1I GGYRCC 3 cut(s) 347, 710, 2454
AccII CGCG 1 cut(s) 1773
AciI CCGC 7 cut(s) 219, 652, 858, 1460, 1635, 1853, 2036
AclWI GGATC 2 cut(s) 143, 3032
AcoI YGGCCR 2 cut(s) 220, 2037
AcsI RAATTY 7 cut(s) 567, 1186, 1702, 1717, 1783, 1939, 2302
AcuI CTGAAG 3 cut(s) 156, 584, 2205
AfiI CCNNNNNNNGG 8 cut(s) 271, 293, 658, 1231, 1829, 2870, 2929, 3150
AflII CTTAAG 2 cut(s) 673, 1624
AflIII ACRYGT 4 cut(s) 1057, 2904, 3019, 3223
AhlI ACTAGT 2 cut(s) 2473, 3071
AjiI CACGTC 1 cut(s) 2905
AjnI CCWGG 3 cut(s) 170, 3251, 3259
AjuI GAANNNNNNNTTGG 2 cut(s) 1960, 1992
AloI GAACNNNNNNTCC 2 cut(s) 3241, 3273
Alw21I GWGCWC 2 cut(s) 1250, 2055
Alw26I GTCTC 3 cut(s) 609, 644, 2895
AlwI GGATC 2 cut(s) 143, 3032
Ama87I CYCGRG 1 cut(s) 398
AoxI GGCC 5 cut(s) 75, 220, 1234, 2037, 2951
ApaI GGGCCC 1 cut(s) 1238
ApeKI GCWGC 4 cut(s) 382, 804, 2566, 3066
ApoI RAATTY 7 cut(s) 567, 1186, 1702, 1717, 1783, 1939, 2302
ArsI GACNNNNNNTTYG 2 cut(s) 395, 427
Asp700I GAANNNNTTC 2 cut(s) 589, 851
Asp718I GGTACC 1 cut(s) 710
AspLEI GCGC 2 cut(s) 1773, 3175
AspS9I GGNCC 5 cut(s) 250, 860, 1234, 1235, 1654
AsuC2I CCSGG 1 cut(s) 379
AsuHPI GGTGA 6 cut(s) 334, 431, 995, 1022, 1616, 1826
AsuII TTCGAA 1 cut(s) 414
AvaI CYCGRG 1 cut(s) 398
AvaII GGWCC 3 cut(s) 250, 860, 1654
BaeGI GKGCMC 1 cut(s) 1238
BanI GGYRCC 3 cut(s) 347, 710, 2454
BanII GRGCYC 2 cut(s) 1238, 1250
BarI GAAGNNNNNNTAC 4 cut(s) 1803, 1835, 2376, 2408
BbsI GAAGAC 1 cut(s) 232
Bbv12I GWGCWC 2 cut(s) 1250, 2055
BbvI GCAGC 4 cut(s) 369, 791, 2553, 3078
BccI CCATC 8 cut(s) 359, 437, 580, 722, 1001, 1324, 2279, 2998
BceAI ACGGC 3 cut(s) 2024, 2360, 2887
BciT130I CCWGG 3 cut(s) 172, 3253, 3261
BclI TGATCA 1 cut(s) 63
BcnI CCSGG 1 cut(s) 379
BcoDI GTCTC 3 cut(s) 609, 644, 2895
BcuI ACTAGT 2 cut(s) 2473, 3071
BfaI CTAG 9 cut(s) 942, 2474, 2555, 2658, 2816, 3072, 3093, 3150, 3269
BfmI CTRYAG 1 cut(s) 2059
BfrI CTTAAG 2 cut(s) 673, 1624
BglII AGATCT 3 cut(s) 6, 1354, 2266
BisI GCNGC 7 cut(s) 220, 383, 652, 805, 2037, 2567, 3067
BlsI GCNGC 7 cut(s) 221, 384, 653, 806, 2038, 2568, 3068
BmcAI AGTACT 3 cut(s) 534, 2187, 2385
Bme1390I CCNGG 4 cut(s) 172, 379, 3253, 3261
Bme18I GGWCC 3 cut(s) 250, 860, 1654
BmeT110I CYCGRG 1 cut(s) 398
BmgBI CACGTC 1 cut(s) 2905
BmgT120I GGNCC 5 cut(s) 250, 860, 1234, 1235, 1654
BmiI GGNNCC 7 cut(s) 349, 712, 1235, 1236, 2456, 2845, 3250
BmrFI CCNGG 4 cut(s) 172, 379, 3253, 3261
BmrI ACTGGG 2 cut(s) 2347, 2715
BmsI GCATC 7 cut(s) 168, 896, 1394, 1622, 2532, 2925, 3254
BmuI ACTGGG 2 cut(s) 2347, 2715
BpiI GAAGAC 1 cut(s) 232
BpmI CTGGAG 2 cut(s) 290, 2951
Bpu10I CCTNAGC 2 cut(s) 164, 1141
Bpu14I TTCGAA 1 cut(s) 414
BpuEI CTTGAG 6 cut(s) 322, 342, 1102, 1112, 2210, 2473
BpuMI CCSGG 1 cut(s) 379
Bsa29I ATCGAT 1 cut(s) 1927
BsaAI YACGTR 2 cut(s) 1160, 3224
BsaBI GATNNNNATC 2 cut(s) 65, 990
BsaI GGTCTC 1 cut(s) 644
BsaJI CCNNGG 3 cut(s) 15, 397, 655
BsaWI WCCGGW 3 cut(s) 929, 2803, 3040
Bsc4I CCNNNNNNNGG 8 cut(s) 271, 293, 658, 1231, 1829, 2870, 2929, 3150
Bse118I RCCGGY 1 cut(s) 344
Bse1I ACTGG 7 cut(s) 712, 1534, 2342, 2721, 2934, 2947, 3250
Bse3DI GCAATG 1 cut(s) 3144
Bse8I GATNNNNATC 2 cut(s) 65, 990
BseBI CCWGG 3 cut(s) 172, 3253, 3261
BseCI ATCGAT 1 cut(s) 1927
BseDI CCNNGG 3 cut(s) 15, 397, 655
BseGI GGATG 9 cut(s) 159, 351, 714, 887, 1012, 1637, 2691, 3241, 3269
BseJI GATNNNNATC 2 cut(s) 65, 990
BseLI CCNNNNNNNGG 8 cut(s) 271, 293, 658, 1231, 1829, 2870, 2929, 3150
BseMI GCAATG 1 cut(s) 3144
BseMII CTCAG 3 cut(s) 80, 325, 1910
BseNI ACTGG 7 cut(s) 712, 1534, 2342, 2721, 2934, 2947, 3250
BseRI GAGGAG 1 cut(s) 2045
BseSI GKGCMC 1 cut(s) 1238
BseX3I CGGCCG 2 cut(s) 220, 2037
BseXI GCAGC 4 cut(s) 369, 791, 2553, 3078
BsgI GTGCAG 1 cut(s) 790
Bsh1236I CGCG 1 cut(s) 1773
Bsh1285I CGRYCG 2 cut(s) 223, 2040
BshFI GGCC 5 cut(s) 77, 222, 1236, 2039, 2953
BshNI GGYRCC 3 cut(s) 347, 710, 2454
BshVI ATCGAT 1 cut(s) 1927
BsiEI CGRYCG 2 cut(s) 223, 2040
BsiHKAI GWGCWC 2 cut(s) 1250, 2055
BsiHKCI CYCGRG 1 cut(s) 398
BsiSI CCGG 5 cut(s) 345, 379, 930, 2804, 3041
BslFI GGGAC 1 cut(s) 416
BslI CCNNNNNNNGG 8 cut(s) 271, 293, 658, 1231, 1829, 2870, 2929, 3150
BsmAI GTCTC 3 cut(s) 609, 644, 2895
BsmBI CGTCTC 1 cut(s) 2895
BsmFI GGGAC 1 cut(s) 416
BsmI GAATGC 1 cut(s) 1167
BsnI GGCC 5 cut(s) 77, 222, 1236, 2039, 2953
Bso31I GGTCTC 1 cut(s) 644
BsoBI CYCGRG 1 cut(s) 398
Bsp119I TTCGAA 1 cut(s) 414
Bsp120I GGGCCC 1 cut(s) 1234
Bsp1286I GDGCHC 3 cut(s) 1238, 1250, 2055
Bsp1407I TGTACA 1 cut(s) 1272
Bsp143I GATC 9 cut(s) 6, 63, 148, 909, 1354, 1928, 2063, 2266, 3037
Bsp19I CCATGG 1 cut(s) 15
BspACI CCGC 7 cut(s) 219, 652, 858, 1460, 1635, 1853, 2036
BspANI GGCC 5 cut(s) 77, 222, 1236, 2039, 2953
BspCNI CTCAG 3 cut(s) 81, 324, 1909
BspDI ATCGAT 1 cut(s) 1927
BspFNI CGCG 1 cut(s) 1773
BspHI TCATGA 1 cut(s) 642
BspLI GGNNCC 7 cut(s) 349, 712, 1235, 1236, 2456, 2845, 3250
BspPI GGATC 2 cut(s) 143, 3032
BspT104I TTCGAA 1 cut(s) 414
BspT107I GGYRCC 3 cut(s) 347, 710, 2454
BspTI CTTAAG 2 cut(s) 673, 1624
BspTNI GGTCTC 1 cut(s) 644
BsrDI GCAATG 1 cut(s) 3144
BsrFI RCCGGY 1 cut(s) 344
BsrGI TGTACA 1 cut(s) 1272
BsrI ACTGG 7 cut(s) 712, 1534, 2342, 2721, 2934, 2947, 3250
BssAI RCCGGY 1 cut(s) 344
BssECI CCNNGG 3 cut(s) 15, 397, 655
BssMI GATC 9 cut(s) 6, 63, 148, 909, 1354, 1928, 2063, 2266, 3037
BssT1I CCWWGG 2 cut(s) 15, 655
Bst2UI CCWGG 3 cut(s) 172, 3253, 3261
Bst4CI ACNGT 5 cut(s) 51, 244, 903, 1272, 1451
Bst6I CTCTTC 5 cut(s) 85, 792, 1033, 2299, 3123
BstAFI CTTAAG 2 cut(s) 673, 1624
BstAPI GCANNNNNTGC 1 cut(s) 2408
BstAUI TGTACA 1 cut(s) 1272
BstBAI YACGTR 2 cut(s) 1160, 3224
BstBI TTCGAA 1 cut(s) 414
BstC8I GCNNGC 3 cut(s) 123, 266, 2485
BstDSI CCRYGG 1 cut(s) 15
BstF5I GGATG 9 cut(s) 159, 351, 714, 887, 1012, 1637, 2691, 3241, 3269
BstFNI CGCG 1 cut(s) 1773
BstHHI GCGC 2 cut(s) 1773, 3175
BstKTI GATC 9 cut(s) 9, 66, 151, 912, 1357, 1931, 2066, 2269, 3040
BstMAI GTCTC 3 cut(s) 609, 644, 2895
BstMBI GATC 9 cut(s) 6, 63, 148, 909, 1354, 1928, 2063, 2266, 3037
BstMCI CGRYCG 2 cut(s) 223, 2040
BstMWI GCNNNNNNNGC 5 cut(s) 165, 1777, 2408, 3170, 3187
BstNI CCWGG 3 cut(s) 172, 3253, 3261
BstSCI CCNGG 4 cut(s) 170, 377, 3251, 3259
BstSFI CTRYAG 1 cut(s) 2059
BstSLI GKGCMC 1 cut(s) 1238
BstUI CGCG 1 cut(s) 1773
BstV1I GCAGC 4 cut(s) 369, 791, 2553, 3078
BstV2I GAAGAC 1 cut(s) 232
BstX2I RGATCY 3 cut(s) 6, 1354, 2266
BstXI CCANNNNNNTGG 3 cut(s) 268, 779, 1529
BstYI RGATCY 3 cut(s) 6, 1354, 2266
BstZI CGGCCG 2 cut(s) 220, 2037
Bsu15I ATCGAT 1 cut(s) 1927
BsuRI GGCC 5 cut(s) 77, 222, 1236, 2039, 2953
BsuTUI ATCGAT 1 cut(s) 1927
BtgI CCRYGG 1 cut(s) 15
BtrI CACGTC 1 cut(s) 2905
BtsCI GGATG 9 cut(s) 159, 351, 714, 887, 1012, 1637, 2691, 3241, 3269
BtsIMutI CAGTG 1 cut(s) 151
Cac8I GCNNGC 3 cut(s) 123, 266, 2485
CciI TCATGA 1 cut(s) 642
CfoI GCGC 2 cut(s) 1773, 3175
Cfr10I RCCGGY 1 cut(s) 344
Cfr13I GGNCC 5 cut(s) 250, 860, 1234, 1235, 1654
ClaI ATCGAT 1 cut(s) 1927
CseI GACGC 1 cut(s) 1762
DpnI GATC 9 cut(s) 8, 65, 150, 911, 1356, 1930, 2065, 2268, 3039
DpnII GATC 9 cut(s) 6, 63, 148, 909, 1354, 1928, 2063, 2266, 3037
DraI TTTAAA 2 cut(s) 130, 2715
EaeI YGGCCR 2 cut(s) 220, 2037
EagI CGGCCG 2 cut(s) 220, 2037
Eam1104I CTCTTC 5 cut(s) 85, 792, 1033, 2299, 3123
EarI CTCTTC 5 cut(s) 85, 792, 1033, 2299, 3123
Ecl136II GAGCTC 1 cut(s) 1248
EclXI CGGCCG 2 cut(s) 220, 2037
Eco130I CCWWGG 2 cut(s) 15, 655
Eco24I GRGCYC 2 cut(s) 1238, 1250
Eco31I GGTCTC 1 cut(s) 644
Eco32I GATATC 2 cut(s) 424, 680
Eco47I GGWCC 3 cut(s) 250, 860, 1654
Eco52I CGGCCG 2 cut(s) 220, 2037
Eco53kI GAGCTC 1 cut(s) 1248
Eco57I CTGAAG 3 cut(s) 156, 584, 2205
Eco88I CYCGRG 1 cut(s) 398
EcoICRI GAGCTC 1 cut(s) 1248
EcoO109I RGGNCCY 2 cut(s) 1234, 1235
EcoRII CCWGG 3 cut(s) 170, 3251, 3259
EcoRV GATATC 2 cut(s) 424, 680
EcoT14I CCWWGG 2 cut(s) 15, 655
EcoT22I ATGCAT 1 cut(s) 2547
EcoT38I GRGCYC 2 cut(s) 1238, 1250
ErhI CCWWGG 2 cut(s) 15, 655
Esp3I CGTCTC 1 cut(s) 2895
FalI AAGNNNNNCTT 2 cut(s) 3120, 3152
FaqI GGGAC 1 cut(s) 416
FauNDI CATATG 1 cut(s) 2260
FbaI TGATCA 1 cut(s) 63
Fnu4HI GCNGC 7 cut(s) 220, 383, 652, 805, 2037, 2567, 3067
FokI GGATG 9 cut(s) 146, 338, 701, 874, 1019, 1644, 2678, 3248, 3276
FriOI GRGCYC 2 cut(s) 1238, 1250
Fsp4HI GCNGC 7 cut(s) 220, 383, 652, 805, 2037, 2567, 3067
FspBI CTAG 9 cut(s) 942, 2474, 2555, 2658, 2816, 3072, 3093, 3150, 3269
GlaI GCGC 2 cut(s) 1772, 3174
GluI GCNGC 7 cut(s) 220, 383, 652, 805, 2037, 2567, 3067
GsuI CTGGAG 2 cut(s) 290, 2951
HaeIII GGCC 5 cut(s) 77, 222, 1236, 2039, 2953
HapII CCGG 5 cut(s) 345, 379, 930, 2804, 3041
HgaI GACGC 1 cut(s) 1762
HhaI GCGC 2 cut(s) 1773, 3175
Hin6I GCGC 2 cut(s) 1771, 3173
HinP1I GCGC 2 cut(s) 1771, 3173
HincII GTYRAC 2 cut(s) 2217, 2892
HindII GTYRAC 2 cut(s) 2217, 2892
HindIII AAGCTT 4 cut(s) 524, 670, 1621, 2520
HpaII CCGG 5 cut(s) 345, 379, 930, 2804, 3041
HphI GGTGA 6 cut(s) 334, 431, 995, 1022, 1616, 1826
Hpy166II GTNNAC 6 cut(s) 287, 1268, 1892, 2217, 2335, 2892
Hpy188I TCNGA 4 cut(s) 90, 136, 296, 2224
Hpy8I GTNNAC 6 cut(s) 287, 1268, 1892, 2217, 2335, 2892
HpyAV CCTTC 7 cut(s) 410, 608, 801, 833, 1140, 1805, 1823
HpyCH4III ACNGT 5 cut(s) 51, 244, 903, 1272, 1451
HpyCH4IV ACGT 5 cut(s) 1057, 1159, 2904, 3019, 3223
HpyF10VI GCNNNNNNNGC 5 cut(s) 165, 1777, 2408, 3170, 3187
HpySE526I ACGT 5 cut(s) 1057, 1159, 2904, 3019, 3223
HspAI GCGC 2 cut(s) 1771, 3173
KpnI GGTACC 1 cut(s) 714
Ksp22I TGATCA 1 cut(s) 63
Kzo9I GATC 9 cut(s) 6, 63, 148, 909, 1354, 1928, 2063, 2266, 3037
LmnI GCTCC 2 cut(s) 173, 2058
Lsp1109I GCAGC 4 cut(s) 369, 791, 2553, 3078
LweI GCATC 7 cut(s) 168, 896, 1394, 1622, 2532, 2925, 3254
MaeI CTAG 9 cut(s) 942, 2474, 2555, 2658, 2816, 3072, 3093, 3150, 3269
MaeII ACGT 5 cut(s) 1057, 1159, 2904, 3019, 3223
MaeIII GTNAC 9 cut(s) 238, 1010, 1532, 1664, 1733, 2476, 2635, 2762, 2780
MalI GATC 9 cut(s) 8, 65, 150, 911, 1356, 1930, 2065, 2268, 3039
MboI GATC 9 cut(s) 6, 63, 148, 909, 1354, 1928, 2063, 2266, 3037
MfeI CAATTG 2 cut(s) 1640, 3176
MflI RGATCY 3 cut(s) 6, 1354, 2266
MhlI GDGCHC 3 cut(s) 1238, 1250, 2055
MlyI GAGTC 2 cut(s) 246, 3265
MmeI TCCRAC 2 cut(s) 210, 954
Mph1103I ATGCAT 1 cut(s) 2547
MroXI GAANNNNTTC 2 cut(s) 589, 851
MslI CAYNNNNRTG 2 cut(s) 20, 758
MspA1I CMGCKG 3 cut(s) 268, 858, 2579
MspCI CTTAAG 2 cut(s) 673, 1624
MspI CCGG 5 cut(s) 345, 379, 930, 2804, 3041
MspR9I CCNGG 4 cut(s) 172, 379, 3253, 3261
MunI CAATTG 2 cut(s) 1640, 3176
Mva1269I GAATGC 1 cut(s) 1167
MvaI CCWGG 3 cut(s) 172, 3253, 3261
MvnI CGCG 1 cut(s) 1773
MwoI GCNNNNNNNGC 5 cut(s) 165, 1777, 2408, 3170, 3187
NciI CCSGG 1 cut(s) 379
NcoI CCATGG 1 cut(s) 15
NdeI CATATG 1 cut(s) 2260
NdeII GATC 9 cut(s) 6, 63, 148, 909, 1354, 1928, 2063, 2266, 3037
NlaIV GGNNCC 7 cut(s) 349, 712, 1235, 1236, 2456, 2845, 3250
NmuCI GTSAC 4 cut(s) 238, 1010, 2476, 2762
NsiI ATGCAT 1 cut(s) 2547
NspV TTCGAA 1 cut(s) 414
PagI TCATGA 1 cut(s) 642
PctI GAATGC 1 cut(s) 1167
PdmI GAANNNNTTC 2 cut(s) 589, 851
PfeI GAWTC 9 cut(s) 179, 852, 1100, 1150, 1579, 1609, 2573, 2620, 2919
PfoI TCCNGGA 2 cut(s) 170, 3259
PkrI GCNGC 7 cut(s) 221, 384, 653, 806, 2038, 2568, 3068
PleI GAGTC 2 cut(s) 245, 3264
PpsI GAGTC 2 cut(s) 245, 3264
Ppu21I YACGTR 2 cut(s) 1160, 3224
PsiI TTATAA 2 cut(s) 998, 1286
Psp124BI GAGCTC 1 cut(s) 1250
Psp6I CCWGG 3 cut(s) 170, 3251, 3259
PspGI CCWGG 3 cut(s) 170, 3251, 3259
PspN4I GGNNCC 7 cut(s) 349, 712, 1235, 1236, 2456, 2845, 3250
PspOMI GGGCCC 1 cut(s) 1234
PspPI GGNCC 5 cut(s) 250, 860, 1234, 1235, 1654
PsrI GAACNNNNNNTAC 2 cut(s) 2311, 2343
PsuI RGATCY 3 cut(s) 6, 1354, 2266
PvuII CAGCTG 2 cut(s) 268, 2579
RseI CAYNNNNRTG 2 cut(s) 20, 758
SacI GAGCTC 1 cut(s) 1250
SatI GCNGC 7 cut(s) 220, 383, 652, 805, 2037, 2567, 3067
Sau3AI GATC 9 cut(s) 6, 63, 148, 909, 1354, 1928, 2063, 2266, 3037
Sau96I GGNCC 5 cut(s) 250, 860, 1234, 1235, 1654
ScaI AGTACT 3 cut(s) 534, 2187, 2385
SchI GAGTC 2 cut(s) 246, 3265
ScrFI CCNGG 4 cut(s) 172, 379, 3253, 3261
SduI GDGCHC 3 cut(s) 1238, 1250, 2055
SfaNI GCATC 7 cut(s) 168, 896, 1394, 1622, 2532, 2925, 3254
SfcI CTRYAG 1 cut(s) 2059
SfuI TTCGAA 1 cut(s) 414
SinI GGWCC 3 cut(s) 250, 860, 1654
SmiMI CAYNNNNRTG 2 cut(s) 20, 758
SmlI CTYRAG 8 cut(s) 301, 357, 673, 1117, 1127, 1624, 2189, 2488
SmoI CTYRAG 8 cut(s) 301, 357, 673, 1117, 1127, 1624, 2189, 2488
SpeI ACTAGT 2 cut(s) 2473, 3071
SsiI CCGC 7 cut(s) 219, 652, 858, 1460, 1635, 1853, 2036
SspI AATATT 2 cut(s) 813, 1066
SspMI CTAG 9 cut(s) 942, 2474, 2555, 2658, 2816, 3072, 3093, 3150, 3269
SstI GAGCTC 1 cut(s) 1250
StyD4I CCNGG 4 cut(s) 170, 377, 3251, 3259
StyI CCWWGG 2 cut(s) 15, 655
TaaI ACNGT 5 cut(s) 51, 244, 903, 1272, 1451
TaiI ACGT 5 cut(s) 1060, 1162, 2907, 3022, 3226
TaqI TCGA 5 cut(s) 370, 414, 1215, 1402, 1927
TatI WGTACW 8 cut(s) 532, 1272, 2185, 2334, 2383, 2535, 3074, 3238
TauI GCSGC 3 cut(s) 222, 654, 2039
TfiI GAWTC 9 cut(s) 179, 852, 1100, 1150, 1579, 1609, 2573, 2620, 2919
TscAI CASTG 1 cut(s) 151
TseFI GTSAC 4 cut(s) 238, 1010, 2476, 2762
TseI GCWGC 4 cut(s) 382, 804, 2566, 3066
Tsp45I GTSAC 4 cut(s) 238, 1010, 2476, 2762
TspGWI ACGGA 1 cut(s) 2913
TspRI CASTG 1 cut(s) 151
Vha464I CTTAAG 2 cut(s) 673, 1624
VpaK11BI GGWCC 3 cut(s) 250, 860, 1654
XapI RAATTY 7 cut(s) 567, 1186, 1702, 1717, 1783, 1939, 2302
XbaI TCTAGA 1 cut(s) 2554
XcmI CCANNNNNNNNNTGG 2 cut(s) 2836, 3190
XmnI GAANNNNTTC 2 cut(s) 589, 851
XspI CTAG 9 cut(s) 942, 2474, 2555, 2658, 2816, 3072, 3093, 3150, 3269
ZrmI AGTACT 3 cut(s) 534, 2187, 2385
Zsp2I ATGCAT 1 cut(s) 2547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.