Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 1939, 2371 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1078 |
| AccBSI | CCGCTC | 1 cut(s) | 2099 |
| AccI | GTMKAC | 1 cut(s) | 1421 |
| AciI | CCGC | 3 cut(s) | 150, 2099, 2797 |
| AclI | AACGTT | 1 cut(s) | 1865 |
| AclWI | GGATC | 4 cut(s) | 838, 976, 1837, 2771 |
| AcoI | YGGCCR | 2 cut(s) | 3, 2057 |
| AcsI | RAATTY | 7 cut(s) | 128, 325, 504, 1211, 1220, 1706, 2350 |
| AcuI | CTGAAG | 2 cut(s) | 1177, 2721 |
| AcyI | GRCGYC | 1 cut(s) | 2791 |
| AfaI | GTAC | 6 cut(s) | 585, 988, 1019, 1359, 1767, 2276 |
| AfeI | AGCGCT | 1 cut(s) | 1485 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 12, 73, 457, 638, 775, 1078, 2572 |
| AflII | CTTAAG | 1 cut(s) | 1283 |
| AflIII | ACRYGT | 2 cut(s) | 1416, 2614 |
| AjiI | CACGTC | 2 cut(s) | 1940, 2459 |
| AjnI | CCWGG | 4 cut(s) | 450, 463, 1596, 2652 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 234, 266 |
| Alw21I | GWGCWC | 1 cut(s) | 210 |
| Alw26I | GTCTC | 9 cut(s) | 167, 191, 283, 731, 1037, 1795, 2312, 2470, 2605 |
| AlwI | GGATC | 4 cut(s) | 838, 976, 1837, 2771 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 833, 1520 |
| Aor51HI | AGCGCT | 1 cut(s) | 1485 |
| AoxI | GGCC | 6 cut(s) | 3, 359, 1141, 1154, 2057, 2650 |
| ApeKI | GCWGC | 8 cut(s) | 304, 785, 821, 1907, 1910, 2390, 2542, 2713 |
| ApoI | RAATTY | 7 cut(s) | 128, 325, 504, 1211, 1220, 1706, 2350 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1707, 1739 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1278, 2239, 2684 |
| AspLEI | GCGC | 2 cut(s) | 105, 1486 |
| AspS9I | GGNCC | 7 cut(s) | 359, 526, 548, 608, 1141, 1951, 2333 |
| AsuHPI | GGTGA | 5 cut(s) | 791, 888, 1454, 1715, 2687 |
| AsuNHI | GCTAGC | 1 cut(s) | 1199 |
| AvaII | GGWCC | 5 cut(s) | 526, 548, 608, 1951, 2333 |
| AxyI | CCTNAGG | 1 cut(s) | 72 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 798, 831 |
| BalI | TGGCCA | 2 cut(s) | 5, 2059 |
| BanII | GRGCYC | 1 cut(s) | 210 |
| BauI | CACGAG | 1 cut(s) | 2311 |
| BbsI | GAAGAC | 2 cut(s) | 1281, 2552 |
| Bbv12I | GWGCWC | 1 cut(s) | 210 |
| BbvI | GCAGC | 8 cut(s) | 291, 772, 808, 1894, 1897, 2377, 2529, 2700 |
| BccI | CCATC | 5 cut(s) | 370, 1231, 1553, 2102, 2164 |
| BceAI | ACGGC | 2 cut(s) | 83, 320 |
| BciT130I | CCWGG | 4 cut(s) | 452, 465, 1598, 2654 |
| BclI | TGATCA | 1 cut(s) | 1458 |
| BcoDI | GTCTC | 9 cut(s) | 167, 191, 283, 731, 1037, 1795, 2312, 2470, 2605 |
| BfaI | CTAG | 6 cut(s) | 156, 435, 516, 1200, 1743, 1820 |
| BfmI | CTRYAG | 3 cut(s) | 612, 825, 1162 |
| BfoI | RGCGCY | 1 cut(s) | 1487 |
| BfrI | CTTAAG | 1 cut(s) | 1283 |
| BfuAI | ACCTGC | 2 cut(s) | 1939, 2371 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 341 |
| BisI | GCNGC | 8 cut(s) | 305, 786, 822, 1908, 1911, 2391, 2543, 2714 |
| BlsI | GCNGC | 8 cut(s) | 306, 787, 823, 1909, 1912, 2392, 2544, 2715 |
| BmcAI | AGTACT | 2 cut(s) | 988, 2276 |
| Bme1390I | CCNGG | 4 cut(s) | 452, 465, 1598, 2654 |
| Bme18I | GGWCC | 5 cut(s) | 526, 548, 608, 1951, 2333 |
| BmgBI | CACGTC | 2 cut(s) | 1940, 2459 |
| BmgT120I | GGNCC | 7 cut(s) | 359, 526, 548, 608, 1141, 1951, 2333 |
| BmiI | GGNNCC | 4 cut(s) | 58, 462, 630, 1142 |
| BmrFI | CCNGG | 4 cut(s) | 452, 465, 1598, 2654 |
| BmrI | ACTGGG | 1 cut(s) | 129 |
| BmsI | GCATC | 3 cut(s) | 364, 903, 2425 |
| BmtI | GCTAGC | 1 cut(s) | 1203 |
| BmuI | ACTGGG | 1 cut(s) | 129 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2956 |
| BpiI | GAAGAC | 2 cut(s) | 1281, 2552 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 550, 582 |
| BpmI | CTGGAG | 4 cut(s) | 447, 1580, 2322, 2675 |
| Bpu10I | CCTNAGC | 1 cut(s) | 552 |
| BpuEI | CTTGAG | 1 cut(s) | 526 |
| BsaAI | YACGTR | 1 cut(s) | 1091 |
| BsaHI | GRCGYC | 1 cut(s) | 2791 |
| BsaJI | CCNNGG | 4 cut(s) | 6, 241, 464, 2954 |
| BsaWI | WCCGGW | 1 cut(s) | 1335 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 12, 73, 457, 638, 775, 1078, 2572 |
| Bse1I | ACTGG | 4 cut(s) | 58, 135, 330, 528 |
| Bse21I | CCTNAGG | 1 cut(s) | 72 |
| Bse3DI | GCAATG | 3 cut(s) | 277, 294, 1011 |
| BseBI | CCWGG | 4 cut(s) | 452, 465, 1598, 2654 |
| BseDI | CCNNGG | 4 cut(s) | 6, 241, 464, 2954 |
| BseGI | GGATG | 4 cut(s) | 1564, 1696, 2043, 2113 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 12, 73, 457, 638, 775, 1078, 2572 |
| BseMI | GCAATG | 3 cut(s) | 277, 294, 1011 |
| BseNI | ACTGG | 4 cut(s) | 58, 135, 330, 528 |
| BseRI | GAGGAG | 3 cut(s) | 59, 475, 574 |
| BseXI | GCAGC | 8 cut(s) | 291, 772, 808, 1894, 1897, 2377, 2529, 2700 |
| BseYI | CCCAGC | 2 cut(s) | 117, 2769 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1340 |
| BshFI | GGCC | 6 cut(s) | 5, 361, 1143, 1156, 2059, 2652 |
| BsiEI | CGRYCG | 1 cut(s) | 1340 |
| BsiHKAI | GWGCWC | 1 cut(s) | 210 |
| BsiSI | CCGG | 1 cut(s) | 1336 |
| BslFI | GGGAC | 1 cut(s) | 2503 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 12, 73, 457, 638, 775, 1078, 2572 |
| BsmAI | GTCTC | 9 cut(s) | 167, 191, 283, 731, 1037, 1795, 2312, 2470, 2605 |
| BsmBI | CGTCTC | 1 cut(s) | 191 |
| BsmFI | GGGAC | 1 cut(s) | 2503 |
| BsmI | GAATGC | 1 cut(s) | 249 |
| BsnI | GGCC | 6 cut(s) | 5, 361, 1143, 1156, 2059, 2652 |
| Bsp1286I | GDGCHC | 1 cut(s) | 210 |
| Bsp1407I | TGTACA | 1 cut(s) | 1017 |
| Bsp143I | GATC | 8 cut(s) | 698, 830, 919, 968, 1458, 1771, 1829, 2776 |
| BspACI | CCGC | 3 cut(s) | 150, 2099, 2797 |
| BspANI | GGCC | 6 cut(s) | 5, 361, 1143, 1156, 2059, 2652 |
| BspHI | TCATGA | 2 cut(s) | 1966, 2395 |
| BspLI | GGNNCC | 4 cut(s) | 58, 462, 630, 1142 |
| BspMI | ACCTGC | 2 cut(s) | 1939, 2371 |
| BspOI | GCTAGC | 1 cut(s) | 1203 |
| BspPI | GGATC | 4 cut(s) | 838, 976, 1837, 2771 |
| BspQI | GCTCTTC | 1 cut(s) | 2178 |
| BspTI | CTTAAG | 1 cut(s) | 1283 |
| BsrBI | CCGCTC | 1 cut(s) | 2099 |
| BsrDI | GCAATG | 3 cut(s) | 277, 294, 1011 |
| BsrGI | TGTACA | 1 cut(s) | 1017 |
| BsrI | ACTGG | 4 cut(s) | 58, 135, 330, 528 |
| BssECI | CCNNGG | 4 cut(s) | 6, 241, 464, 2954 |
| BssMI | GATC | 8 cut(s) | 698, 830, 919, 968, 1458, 1771, 1829, 2776 |
| BssNAI | GTATAC | 1 cut(s) | 1422 |
| BssNI | GRCGYC | 1 cut(s) | 2791 |
| BssSI | CACGAG | 1 cut(s) | 2311 |
| BssT1I | CCWWGG | 3 cut(s) | 6, 241, 2954 |
| Bst1107I | GTATAC | 1 cut(s) | 1422 |
| Bst2BI | CACGAG | 1 cut(s) | 2311 |
| Bst2UI | CCWGG | 4 cut(s) | 452, 465, 1598, 2654 |
| Bst4CI | ACNGT | 5 cut(s) | 82, 991, 1505, 2526, 2908 |
| Bst6I | CTCTTC | 2 cut(s) | 183, 2178 |
| BstACI | GRCGYC | 1 cut(s) | 2791 |
| BstAFI | CTTAAG | 1 cut(s) | 1283 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 95, 1247, 2000 |
| BstAUI | TGTACA | 1 cut(s) | 1017 |
| BstBAI | YACGTR | 1 cut(s) | 1091 |
| BstC8I | GCNNGC | 6 cut(s) | 936, 958, 1201, 2199, 2729, 2795 |
| BstF5I | GGATG | 4 cut(s) | 1564, 1696, 2043, 2113 |
| BstH2I | RGCGCY | 1 cut(s) | 1487 |
| BstHHI | GCGC | 2 cut(s) | 105, 1486 |
| BstKTI | GATC | 8 cut(s) | 701, 833, 922, 971, 1461, 1774, 1832, 2779 |
| BstMAI | GTCTC | 9 cut(s) | 167, 191, 283, 731, 1037, 1795, 2312, 2470, 2605 |
| BstMBI | GATC | 8 cut(s) | 698, 830, 919, 968, 1458, 1771, 1829, 2776 |
| BstMCI | CGRYCG | 1 cut(s) | 1340 |
| BstNI | CCWGG | 4 cut(s) | 452, 465, 1598, 2654 |
| BstNSI | RCATGY | 5 cut(s) | 98, 1018, 1420, 2618, 2731 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2956 |
| BstSCI | CCNGG | 4 cut(s) | 450, 463, 1596, 2652 |
| BstSFI | CTRYAG | 3 cut(s) | 612, 825, 1162 |
| BstV1I | GCAGC | 8 cut(s) | 291, 772, 808, 1894, 1897, 2377, 2529, 2700 |
| BstV2I | GAAGAC | 2 cut(s) | 1281, 2552 |
| BstX2I | RGATCY | 2 cut(s) | 830, 968 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1604 |
| BstYI | RGATCY | 2 cut(s) | 830, 968 |
| BstZ17I | GTATAC | 1 cut(s) | 1422 |
| Bsu36I | CCTNAGG | 1 cut(s) | 72 |
| BsuRI | GGCC | 6 cut(s) | 5, 361, 1143, 1156, 2059, 2652 |
| BtrI | CACGTC | 2 cut(s) | 1940, 2459 |
| BtsCI | GGATG | 4 cut(s) | 1564, 1696, 2043, 2113 |
| BtsIMutI | CAGTG | 4 cut(s) | 337, 929, 1201, 1232 |
| BveI | ACCTGC | 2 cut(s) | 1939, 2371 |
| Cac8I | GCNNGC | 6 cut(s) | 936, 958, 1201, 2199, 2729, 2795 |
| CaiI | CAGNNNCTG | 2 cut(s) | 833, 1520 |
| CciI | TCATGA | 2 cut(s) | 1966, 2395 |
| CfoI | GCGC | 2 cut(s) | 105, 1486 |
| Cfr13I | GGNCC | 7 cut(s) | 359, 526, 548, 608, 1141, 1951, 2333 |
| CseI | GACGC | 1 cut(s) | 2799 |
| Csp6I | GTAC | 6 cut(s) | 584, 987, 1018, 1358, 1766, 2275 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2036, 2049, 2071, 2084 |
| CviQI | GTAC | 6 cut(s) | 584, 987, 1018, 1358, 1766, 2275 |
| DpnI | GATC | 8 cut(s) | 700, 832, 921, 970, 1460, 1773, 1831, 2778 |
| DpnII | GATC | 8 cut(s) | 698, 830, 919, 968, 1458, 1771, 1829, 2776 |
| DraI | TTTAAA | 1 cut(s) | 1209 |
| EaeI | YGGCCR | 2 cut(s) | 3, 2057 |
| Eam1104I | CTCTTC | 2 cut(s) | 183, 2178 |
| EarI | CTCTTC | 2 cut(s) | 183, 2178 |
| Ecl136II | GAGCTC | 1 cut(s) | 208 |
| Eco130I | CCWWGG | 3 cut(s) | 6, 241, 2954 |
| Eco24I | GRGCYC | 1 cut(s) | 210 |
| Eco47I | GGWCC | 5 cut(s) | 526, 548, 608, 1951, 2333 |
| Eco47III | AGCGCT | 1 cut(s) | 1485 |
| Eco53kI | GAGCTC | 1 cut(s) | 208 |
| Eco57I | CTGAAG | 2 cut(s) | 1177, 2721 |
| Eco81I | CCTNAGG | 1 cut(s) | 72 |
| EcoICRI | GAGCTC | 1 cut(s) | 208 |
| EcoRI | GAATTC | 2 cut(s) | 325, 1706 |
| EcoRII | CCWGG | 4 cut(s) | 450, 463, 1596, 2652 |
| EcoT14I | CCWWGG | 3 cut(s) | 6, 241, 2954 |
| EcoT22I | ATGCAT | 1 cut(s) | 379 |
| EcoT38I | GRGCYC | 1 cut(s) | 210 |
| ErhI | CCWWGG | 3 cut(s) | 6, 241, 2954 |
| Esp3I | CGTCTC | 1 cut(s) | 191 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 764, 796, 795, 827, 1266, 1298, 1305, 1337 |
| FaqI | GGGAC | 1 cut(s) | 2503 |
| FauI | CCCGC | 2 cut(s) | 143, 2092 |
| FauNDI | CATATG | 2 cut(s) | 1387, 2428 |
| FbaI | TGATCA | 1 cut(s) | 1458 |
| FblI | GTMKAC | 1 cut(s) | 1421 |
| Fnu4HI | GCNGC | 8 cut(s) | 305, 786, 822, 1908, 1911, 2391, 2543, 2714 |
| FokI | GGATG | 4 cut(s) | 1571, 1703, 2030, 2120 |
| FriOI | GRGCYC | 1 cut(s) | 210 |
| Fsp4HI | GCNGC | 8 cut(s) | 305, 786, 822, 1908, 1911, 2391, 2543, 2714 |
| FspBI | CTAG | 6 cut(s) | 156, 435, 516, 1200, 1743, 1820 |
| GlaI | GCGC | 2 cut(s) | 104, 1485 |
| GluI | GCNGC | 8 cut(s) | 305, 786, 822, 1908, 1911, 2391, 2543, 2714 |
| GsaI | CCCAGC | 2 cut(s) | 121, 2773 |
| GsuI | CTGGAG | 4 cut(s) | 447, 1580, 2322, 2675 |
| HaeII | RGCGCY | 1 cut(s) | 1487 |
| HaeIII | GGCC | 6 cut(s) | 5, 361, 1143, 1156, 2059, 2652 |
| HapII | CCGG | 1 cut(s) | 1336 |
| HgaI | GACGC | 1 cut(s) | 2799 |
| HhaI | GCGC | 2 cut(s) | 105, 1486 |
| Hin1I | GRCGYC | 1 cut(s) | 2791 |
| Hin6I | GCGC | 2 cut(s) | 103, 1484 |
| HinP1I | GCGC | 2 cut(s) | 103, 1484 |
| HincII | GTYRAC | 5 cut(s) | 870, 1642, 1663, 1784, 2329 |
| HindII | GTYRAC | 5 cut(s) | 870, 1642, 1663, 1784, 2329 |
| HindIII | AAGCTT | 1 cut(s) | 907 |
| HpaI | GTTAAC | 1 cut(s) | 2329 |
| HpaII | CCGG | 1 cut(s) | 1336 |
| HphI | GGTGA | 5 cut(s) | 791, 888, 1454, 1715, 2687 |
| Hpy99I | CGWCG | 1 cut(s) | 2793 |
| HpyAV | CCTTC | 6 cut(s) | 5, 132, 766, 1620, 1897, 2097 |
| HpyCH4III | ACNGT | 5 cut(s) | 82, 991, 1505, 2526, 2908 |
| HpyCH4IV | ACGT | 5 cut(s) | 1032, 1090, 1865, 1939, 2458 |
| HpySE526I | ACGT | 5 cut(s) | 1032, 1090, 1865, 1939, 2458 |
| Hsp92I | GRCGYC | 1 cut(s) | 2791 |
| HspAI | GCGC | 2 cut(s) | 103, 1484 |
| Ksp22I | TGATCA | 1 cut(s) | 1458 |
| KspAI | GTTAAC | 1 cut(s) | 2329 |
| Kzo9I | GATC | 8 cut(s) | 698, 830, 919, 968, 1458, 1771, 1829, 2776 |
| LguI | GCTCTTC | 1 cut(s) | 2178 |
| LmnI | GCTCC | 2 cut(s) | 466, 1630 |
| Lsp1109I | GCAGC | 8 cut(s) | 291, 772, 808, 1894, 1897, 2377, 2529, 2700 |
| LweI | GCATC | 3 cut(s) | 364, 903, 2425 |
| MaeI | CTAG | 6 cut(s) | 156, 435, 516, 1200, 1743, 1820 |
| MaeII | ACGT | 5 cut(s) | 1032, 1090, 1865, 1939, 2458 |
| MaeIII | GTNAC | 1 cut(s) | 573 |
| MalI | GATC | 8 cut(s) | 700, 832, 921, 970, 1460, 1773, 1831, 2778 |
| MbiI | CCGCTC | 1 cut(s) | 2099 |
| MboI | GATC | 8 cut(s) | 698, 830, 919, 968, 1458, 1771, 1829, 2776 |
| MfeI | CAATTG | 3 cut(s) | 1110, 1998, 2621 |
| MflI | RGATCY | 2 cut(s) | 830, 968 |
| MhlI | GDGCHC | 1 cut(s) | 210 |
| MlsI | TGGCCA | 2 cut(s) | 5, 2059 |
| MluNI | TGGCCA | 2 cut(s) | 5, 2059 |
| MlyI | GAGTC | 5 cut(s) | 169, 559, 1789, 2179, 2472 |
| MmeI | TCCRAC | 1 cut(s) | 1593 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 2059 |
| Mph1103I | ATGCAT | 1 cut(s) | 379 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1278, 2239, 2684 |
| MscI | TGGCCA | 2 cut(s) | 5, 2059 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 2059 |
| MspA1I | CMGCKG | 1 cut(s) | 2797 |
| MspCI | CTTAAG | 1 cut(s) | 1283 |
| MspI | CCGG | 1 cut(s) | 1336 |
| MspR9I | CCNGG | 4 cut(s) | 452, 465, 1598, 2654 |
| MunI | CAATTG | 3 cut(s) | 1110, 1998, 2621 |
| Mva1269I | GAATGC | 1 cut(s) | 249 |
| MvaI | CCWGG | 4 cut(s) | 452, 465, 1598, 2654 |
| NdeI | CATATG | 2 cut(s) | 1387, 2428 |
| NdeII | GATC | 8 cut(s) | 698, 830, 919, 968, 1458, 1771, 1829, 2776 |
| NheI | GCTAGC | 1 cut(s) | 1199 |
| NlaIV | GGNNCC | 4 cut(s) | 58, 462, 630, 1142 |
| NmeAIII | GCCGAG | 2 cut(s) | 1803, 2628 |
| NsiI | ATGCAT | 1 cut(s) | 379 |
| NspI | RCATGY | 5 cut(s) | 98, 1018, 1420, 2618, 2731 |
| PaeI | GCATGC | 1 cut(s) | 2731 |
| PagI | TCATGA | 2 cut(s) | 1966, 2395 |
| PciI | ACATGT | 2 cut(s) | 1416, 2614 |
| PciSI | GCTCTTC | 1 cut(s) | 2178 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2863 |
| PctI | GAATGC | 1 cut(s) | 249 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1278, 2239, 2684 |
| PfeI | GAWTC | 8 cut(s) | 22, 668, 856, 1342, 2040, 2423, 2785, 2965 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1078 |
| PfoI | TCCNGGA | 1 cut(s) | 1596 |
| PkrI | GCNGC | 8 cut(s) | 306, 787, 823, 1909, 1912, 2392, 2544, 2715 |
| PleI | GAGTC | 5 cut(s) | 169, 559, 1788, 2178, 2472 |
| PpsI | GAGTC | 5 cut(s) | 169, 559, 1788, 2178, 2472 |
| Ppu21I | YACGTR | 1 cut(s) | 1091 |
| PscI | ACATGT | 2 cut(s) | 1416, 2614 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2956 |
| Psp124BI | GAGCTC | 1 cut(s) | 210 |
| Psp1406I | AACGTT | 1 cut(s) | 1865 |
| Psp6I | CCWGG | 4 cut(s) | 450, 463, 1596, 2652 |
| PspFI | CCCAGC | 2 cut(s) | 117, 2769 |
| PspGI | CCWGG | 4 cut(s) | 450, 463, 1596, 2652 |
| PspN4I | GGNNCC | 4 cut(s) | 58, 462, 630, 1142 |
| PspPI | GGNCC | 7 cut(s) | 359, 526, 548, 608, 1141, 1951, 2333 |
| PstNI | CAGNNNCTG | 2 cut(s) | 833, 1520 |
| PsuI | RGATCY | 2 cut(s) | 830, 968 |
| RsaI | GTAC | 6 cut(s) | 585, 988, 1019, 1359, 1767, 2276 |
| RsaNI | GTAC | 6 cut(s) | 584, 987, 1018, 1358, 1766, 2275 |
| SacI | GAGCTC | 1 cut(s) | 210 |
| SapI | GCTCTTC | 1 cut(s) | 2178 |
| SatI | GCNGC | 8 cut(s) | 305, 786, 822, 1908, 1911, 2391, 2543, 2714 |
| Sau3AI | GATC | 8 cut(s) | 698, 830, 919, 968, 1458, 1771, 1829, 2776 |
| Sau96I | GGNCC | 7 cut(s) | 359, 526, 548, 608, 1141, 1951, 2333 |
| ScaI | AGTACT | 2 cut(s) | 988, 2276 |
| SchI | GAGTC | 5 cut(s) | 169, 559, 1789, 2179, 2472 |
| ScrFI | CCNGG | 4 cut(s) | 452, 465, 1598, 2654 |
| SduI | GDGCHC | 1 cut(s) | 210 |
| SfaNI | GCATC | 3 cut(s) | 364, 903, 2425 |
| SfcI | CTRYAG | 3 cut(s) | 612, 825, 1162 |
| SinI | GGWCC | 5 cut(s) | 526, 548, 608, 1951, 2333 |
| SmlI | CTYRAG | 2 cut(s) | 541, 1283 |
| SmoI | CTYRAG | 2 cut(s) | 541, 1283 |
| SphI | GCATGC | 1 cut(s) | 2731 |
| SsiI | CCGC | 3 cut(s) | 150, 2099, 2797 |
| SspI | AATATT | 1 cut(s) | 1050 |
| SspMI | CTAG | 6 cut(s) | 156, 435, 516, 1200, 1743, 1820 |
| SstI | GAGCTC | 1 cut(s) | 210 |
| StyD4I | CCNGG | 4 cut(s) | 450, 463, 1596, 2652 |
| StyI | CCWWGG | 3 cut(s) | 6, 241, 2954 |
| TaaI | ACNGT | 5 cut(s) | 82, 991, 1505, 2526, 2908 |
| TaiI | ACGT | 5 cut(s) | 1035, 1093, 1868, 1942, 2461 |
| TaqII | GACCGA | 1 cut(s) | 179 |
| TatI | WGTACW | 3 cut(s) | 986, 1017, 2274 |
| TfiI | GAWTC | 8 cut(s) | 22, 668, 856, 1342, 2040, 2423, 2785, 2965 |
| TscAI | CASTG | 4 cut(s) | 337, 929, 1201, 1239 |
| TseI | GCWGC | 8 cut(s) | 304, 785, 821, 1907, 1910, 2390, 2542, 2713 |
| TspGWI | ACGGA | 1 cut(s) | 2346 |
| TspRI | CASTG | 4 cut(s) | 337, 929, 1201, 1239 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1078 |
| Vha464I | CTTAAG | 1 cut(s) | 1283 |
| VpaK11BI | GGWCC | 5 cut(s) | 526, 548, 608, 1951, 2333 |
| XapI | RAATTY | 7 cut(s) | 128, 325, 504, 1211, 1220, 1706, 2350 |
| XbaI | TCTAGA | 1 cut(s) | 434 |
| XceI | RCATGY | 5 cut(s) | 98, 1018, 1420, 2618, 2731 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 542 |
| XmiI | GTMKAC | 1 cut(s) | 1421 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1278, 2239, 2684 |
| XspI | CTAG | 6 cut(s) | 156, 435, 516, 1200, 1743, 1820 |
| ZrmI | AGTACT | 2 cut(s) | 988, 2276 |
| Zsp2I | ATGCAT | 1 cut(s) | 379 |