MD10G1304200.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
39046225 .. 39049413
3189 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1304200.v1.1.491

Sequence Viewer

Length: 3084 bp
ATGGGGGTTTTGGTTTTGAAATTGATCTTAATATACTTGCTTTTCAGTGCAGTGTTCGTTTGTTGTTGGAGCTCTCTGCAATGGGGACTCGGAGGGAATGCGATGGATAGGCTGGCTCTGCTTGCCATCAAAGCTCAAATAAAGCAAGATCTCCATAATTACAACGTGATGAGCTCCTGGAACGAATCCACGCACTTTTGCATGTGGCATGGTGTGACGTGCAGTCGACGACATCACCAAAGGGTCACTAAGCTGGACCTGCAATCTCAAAATCTGGTAGGGAAATTATCCCCAAACATAGGAAATCTGAGTTTTCTAAGAGAGCTGTGGCTGCAAAACAACAGCTTTAGTCAAGAAATTCCTCCGCAAATTGGGAATTTGCGTAGATTGCAAGTATTGCGATTAGATCTGAACTCATTTAGTGGCAGTATTCCACACAATATATCATATTGCTTCAACCTTATCCTTGTGAATTTCACTCGCAACAAGTTGGTGGGTAAAATTCCTTCAGAAATTGGATTGCTGTCGAAACTGCAAAAAATTTCATTACAAGATACTACTGTAACGGGACAGGTCCCTCCTTCCTTGGGGAACCTTTCGTCTCTCCAATTACTAGCTCTTGGTAGTAATGACTTGATGGGCAACATCCCCAGTTCTCTTGGCCAATTGAAAAAATTAGCCATCTTGGGATTGGCGATAAATCAGTTGTCTGGTAGCATCCCTTCCTCAATTTATAACCTCTCTTCTCTTGTTACATTTTCCATGCCATTTAACCAATTTGAAGGGAGTATTCCATCAGATATTGGCAAAACTCTTCCTAATCTCGAAGTCTTCAACGTCAACTCAAACCAACTCACTGGGTCCATACCTTCCTCAATATTCAACGTCACAAGTGTTTGGTATTTTGATGTTGGGCATAACAACCTAATCGGACGGGTACCGAATCTCCAAAAGCTTCACAACCTCGTGCAGTTCAACATTCAATATAACAATATTGGAAGCGGTAAAGATGGTGACTTAAGTTTTCTCTCGGACTTGACCAATGCCACCCAGTTACAAAGGCTGGGTATTAGCAGCAACAATTTTGGAGGGACATTGCCCATGTCAATAGCCAATCTCTCAACCAAACTCGAATGGTTTTGGGTTCAACATAACCAAATATATGGAAGCATCCCATCTGGGATAGGGAATCTGGTGAGCTTGGAAAGGTTGCTTTGGGGGAATAATAGCTTCACAGGTAACATCCCCTCTGACATGGGTAAGCTTTCAAACCTTGGATCATTAGAAATTTTCATGAACAAATTATCAGGAAATATTCCGTCTTCCTTAAGAAATTTAACCAAGTTATACCATCTTGAGTTGGATGGAAATTATCTTGAGGGCCCCATTCCTTCAGGTCTGGGGGAATGCCATGGGTTGCAATTGTTGGATCTTTCTGATAACCTCCTAAATGGCACAATACCCAAACAAGTTTTTAGACTCTCCTCCTTATCGATTTCTTTGAACTTGTCTAATAACCTCTTCACAGGTTCCCTTCCCCCGGAGGTTGGGAATTTCCATAGTCTAAGTGAACTGGATCTTTCTGATAACATGTTATCTGGAGAACTCCCCAGTGGCCTTGGTGGTTGTGAGAGTTTAGAAGTCCTGCATTTGCAAGGAAACTTCTTCCACGGGTCCATTCCTTTGTCTATGAGTTCAGTTAGAGGGATTCAAGAACTAGACCTTTCTCACAATAATTTTTCAGGTGAAATTCCACATTTTTTAGAAGGCTTTAGAATCCTTAATAATCTGAACTTATCATTCAATCAATTTTGGGGAGTGGTACCAACTGGAGGTGTTTTCAAAAATGCGAGTGCTATTTCAGTTGTTGGCAACACTAATCTGTGCAGCCCTGTTGCTAATTTAAACCTTCCCAAGTGCAAGTCTAAAGAGACCAAGAAACGAAGATTGTCTCGTAGCTTGAAACTAATACTCCCTTTAGTATTTGGACTTACTCTTCTAGGAATAGCCATGGTGTTCTATTTTTTTCTTTGTTCTTTAAGGAAGAAAAGGAAAGAAATTTCATTGAGCACTTTGGGGAACACTATTTTGCAAGTGTCATATGCTACTCTACTCAAAGCTACTGACAGGTTCTCAGAGGCTAATTTAATTGGTGCTGGCAGTTTTGGGTCTGTGTACAAAGGAGTTCTTGATGAGGATGATAAAGCTCAACTTGTTGCCGTGAAGGTGTTTAACTTGTTACGCCATGGAGCTTCGAGGAGTTTCATAGCCGAGTGTGAAGCTTTGAGAAATATTAGGCACCGAAATCTCGTCAAGATTATAACCGTGTGTTCAAGTGTTGATTTTAATGGTAAAGATTTCAAGGCTTTAGTTTATGAGTTCATGGACAACGGGAGCTTAGAGGAGTGGCTGCATCCACCTACTGGAACTGAAGACTTAAGAGATCATGTACCCAAGAAGTTAAGTCTTCTTCAGAGGCTAGAAATTGCCATTGGTGTTGCTTGTGCATTGGATTATCTTCATAATCATTGTGAAACGCCAATAGTTCATTGTGATCTCAAGCCAAGCAACGTTCTCTTGGACAATGAATTGAATGGCCATGTTTCTGACTTTGGATTAGCAAGGTTTCTCTCACAAGTAACGAGTAATGTTTCAACAATTCATAGTCAGACAAGTTCCGTTGGAATAAGAGGAACAATTGGTTATGCAGCTCCAGAGTATGGAATGGGGAGTGAGGTGTCAACGAGTGGTGATGTATACAGCTTTGGCATTCTCTTGTTGGAGATGTTTACAGGGAAGAGACCCACTGACATGATGTTTGGTGATAGCTTGAACCTTCATAATTTTGTCAAGATGGCTCTCACTGGGCAAGTTACTGAGATTGCTGACGCACCACTTCTTCAAGGAGGCACGAACGAGAATCCCAATCATTGCAGTGCGAGAATTCATAAAGTTGAGGTGTGCTTGAGTTTAATATTTAGAATTGGAATTGCTTGTTCTGCTGAATCCGCAACAGATCGACTAAAGAATATCAATGATGCTGCATCTGAACTTCATTCCATTAGGAATACTTTTCTTGGATAG

Protein Analysis

1028

Amino Acids

112.54

Weight (kDa)

7.6

Isoelectric Point (pI)

38.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 75 2.4e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 85 - 185 2.1e-07 Leucine-rich repeat region
LRR_14 PF23598 171 - 253 4.3e-07 Leucine-rich repeat region
LRR_14 PF23598 351 - 500 5.5e-09 Leucine-rich repeat region
Pkinase PF00069 713 - 953 1e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 715 - 939 3.6e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 735, 2321
Acc36I ACCTGC 1 cut(s) 267
Acc65I GGTACC 2 cut(s) 937, 1822
AccB1I GGYRCC 3 cut(s) 937, 1822, 2298
AccB7I CCANNNNNTGG 2 cut(s) 2423, 2720
AccI GTMKAC 2 cut(s) 226, 2757
AciI CCGC 3 cut(s) 365, 1002, 3009
AclI AACGTT 1 cut(s) 2571
AclWI GGATC 3 cut(s) 1285, 1437, 1584
AcoI YGGCCR 2 cut(s) 661, 2596
AcuI CTGAAG 4 cut(s) 492, 1377, 2451, 2456
AfaI GTAC 4 cut(s) 939, 1824, 2177, 2451
AfiI CCNNNNNNNGG 8 cut(s) 299, 371, 587, 1540, 1547, 1832, 2423, 2720
AflII CTTAAG 3 cut(s) 1018, 1327, 2437
AflIII ACRYGT 1 cut(s) 1590
AhdI GACNNNNNGTC 1 cut(s) 222
AjiI CACGTC 1 cut(s) 219
AjnI CCWGG 1 cut(s) 176
AjuI GAANNNNNNNTTGG 2 cut(s) 2475, 2507
Alw21I GWGCWC 3 cut(s) 74, 176, 2072
Alw26I GTCTC 4 cut(s) 606, 1925, 1956, 2794
AlwI GGATC 3 cut(s) 1285, 1437, 1584
AoxI GGCC 4 cut(s) 661, 1381, 1615, 2596
ApaI GGGCCC 1 cut(s) 1385
ApeKI GCWGC 6 cut(s) 331, 1074, 1887, 2410, 2708, 3041
ArsI GACNNNNNNTTYG 2 cut(s) 2801, 2833
Asp718I GGTACC 2 cut(s) 937, 1822
AspS9I GGNCC 6 cut(s) 256, 574, 861, 1381, 1382, 1674
AsuC2I CCSGG 1 cut(s) 1541
AsuHPI GGTGA 6 cut(s) 227, 1025, 1207, 1757, 2762, 2834
AvaII GGWCC 4 cut(s) 256, 574, 861, 1674
BaeGI GKGCMC 1 cut(s) 1385
BaeI ACNNNNGTAYC 2 cut(s) 546, 579
BalI TGGCCA 2 cut(s) 663, 2598
BanI GGYRCC 3 cut(s) 937, 1822, 2298
BanII GRGCYC 3 cut(s) 74, 176, 1385
BarI GAAGNNNNNNTAC 4 cut(s) 490, 522, 706, 738
BauI CACGAG 1 cut(s) 965
BbsI GAAGAC 4 cut(s) 823, 1314, 2439, 2459
Bbv12I GWGCWC 3 cut(s) 74, 176, 2072
BbvI GCAGC 6 cut(s) 318, 1086, 1899, 2397, 2720, 3028
BceAI ACGGC 1 cut(s) 2204
BciT130I CCWGG 1 cut(s) 178
BcnI CCSGG 1 cut(s) 1541
BcoDI GTCTC 4 cut(s) 606, 1925, 1956, 2794
BfaI CTAG 4 cut(s) 614, 1718, 2000, 2480
BfrI CTTAAG 3 cut(s) 1018, 1327, 2437
BfuAI ACCTGC 1 cut(s) 267
BglII AGATCT 2 cut(s) 148, 406
BisI GCNGC 6 cut(s) 332, 1075, 1888, 2411, 2709, 3042
BlsI GCNGC 6 cut(s) 333, 1076, 1889, 2412, 2710, 3043
Bme1390I CCNGG 2 cut(s) 178, 1541
Bme18I GGWCC 4 cut(s) 256, 574, 861, 1674
BmeRI GACNNNNNGTC 1 cut(s) 222
BmgBI CACGTC 1 cut(s) 219
BmgT120I GGNCC 6 cut(s) 256, 574, 861, 1381, 1382, 1674
BmrFI CCNGG 2 cut(s) 178, 1541
BmrI ACTGGG 5 cut(s) 645, 867, 1045, 1605, 2874
BmsI GCATC 5 cut(s) 726, 1179, 2422, 3028, 3053
BmuI ACTGGG 5 cut(s) 645, 867, 1045, 1605, 2874
BpiI GAAGAC 4 cut(s) 823, 1314, 2439, 2459
BpmI CTGGAG 3 cut(s) 1620, 1851, 2697
BpuEI CTTGAG 4 cut(s) 1376, 1397, 2543, 2986
BpuMI CCSGG 1 cut(s) 1541
Bsa29I ATCGAT 1 cut(s) 1493
BsaI GGTCTC 2 cut(s) 1925, 2794
BsaJI CCNNGG 8 cut(s) 585, 1273, 1411, 1539, 1618, 1669, 2010, 2245
BsaXI ACNNNNNCTCC 4 cut(s) 930, 960, 1956, 1986
Bsc4I CCNNNNNNNGG 8 cut(s) 299, 371, 587, 1540, 1547, 1832, 2423, 2720
Bse1I ACTGG 8 cut(s) 651, 862, 1051, 1578, 1611, 1834, 2428, 2869
Bse3DI GCAATG 3 cut(s) 86, 1094, 2929
BseBI CCWGG 1 cut(s) 178
BseCI ATCGAT 1 cut(s) 1493
BseDI CCNNGG 8 cut(s) 585, 1273, 1411, 1539, 1618, 1669, 2010, 2245
BseGI GGATG 7 cut(s) 645, 717, 1170, 1242, 1369, 2203, 2413
BseLI CCNNNNNNNGG 8 cut(s) 299, 371, 587, 1540, 1547, 1832, 2423, 2720
BseMI GCAATG 3 cut(s) 86, 1094, 2929
BseMII CTCAG 3 cut(s) 299, 2148, 2868
BseNI ACTGG 8 cut(s) 651, 862, 1051, 1578, 1611, 1834, 2428, 2869
BseRI GAGGAG 3 cut(s) 1474, 2272, 2417
BseSI GKGCMC 1 cut(s) 1385
BseXI GCAGC 6 cut(s) 318, 1086, 1899, 2397, 2720, 3028
BseYI CCCAGC 1 cut(s) 1063
BsgI GTGCAG 4 cut(s) 69, 241, 989, 1906
BshFI GGCC 4 cut(s) 663, 1383, 1617, 2598
BshNI GGYRCC 3 cut(s) 937, 1822, 2298
BshVI ATCGAT 1 cut(s) 1493
BsiHKAI GWGCWC 3 cut(s) 74, 176, 2072
BsiSI CCGG 1 cut(s) 1541
BslFI GGGAC 4 cut(s) 99, 560, 582, 1105
BslI CCNNNNNNNGG 8 cut(s) 299, 371, 587, 1540, 1547, 1832, 2423, 2720
BsmAI GTCTC 4 cut(s) 606, 1925, 1956, 2794
BsmBI CGTCTC 1 cut(s) 606
BsmFI GGGAC 4 cut(s) 99, 560, 582, 1105
BsmI GAATGC 3 cut(s) 103, 1412, 2769
BsnI GGCC 4 cut(s) 663, 1383, 1617, 2598
Bso31I GGTCTC 2 cut(s) 1925, 2794
Bsp120I GGGCCC 1 cut(s) 1381
Bsp1286I GDGCHC 4 cut(s) 74, 176, 1385, 2072
Bsp1407I TGTACA 1 cut(s) 2175
Bsp143I GATC 9 cut(s) 24, 148, 406, 1277, 1429, 1576, 2443, 2554, 3016
Bsp19I CCATGG 3 cut(s) 1411, 2010, 2245
BspACI CCGC 3 cut(s) 365, 1002, 3009
BspANI GGCC 4 cut(s) 663, 1383, 1617, 2598
BspCNI CTCAG 3 cut(s) 300, 2147, 2869
BspDI ATCGAT 1 cut(s) 1493
BspHI TCATGA 1 cut(s) 1293
BspMI ACCTGC 1 cut(s) 267
BspPI GGATC 3 cut(s) 1285, 1437, 1584
BspT107I GGYRCC 3 cut(s) 937, 1822, 2298
BspTI CTTAAG 3 cut(s) 1018, 1327, 2437
BspTNI GGTCTC 2 cut(s) 1925, 2794
BsrDI GCAATG 3 cut(s) 86, 1094, 2929
BsrGI TGTACA 1 cut(s) 2175
BsrI ACTGG 8 cut(s) 651, 862, 1051, 1578, 1611, 1834, 2428, 2869
BssECI CCNNGG 8 cut(s) 585, 1273, 1411, 1539, 1618, 1669, 2010, 2245
BssMI GATC 9 cut(s) 24, 148, 406, 1277, 1429, 1576, 2443, 2554, 3016
BssNAI GTATAC 1 cut(s) 2758
BssSI CACGAG 1 cut(s) 965
BssT1I CCWWGG 6 cut(s) 585, 1273, 1411, 1618, 2010, 2245
Bst1107I GTATAC 1 cut(s) 2758
Bst2BI CACGAG 1 cut(s) 965
Bst2UI CCWGG 1 cut(s) 178
Bst4CI ACNGT 2 cut(s) 562, 2326
Bst6I CTCTTC 5 cut(s) 748, 819, 1526, 2001, 2792
BstAFI CTTAAG 3 cut(s) 1018, 1327, 2437
BstAPI GCANNNNNTGC 1 cut(s) 397
BstAUI TGTACA 1 cut(s) 2175
BstC8I GCNNGC 3 cut(s) 114, 123, 2158
BstDEI CTNAG 7 cut(s) 249, 308, 317, 1565, 2134, 2398, 2877
BstDSI CCRYGG 4 cut(s) 1411, 1669, 2010, 2245
BstF5I GGATG 7 cut(s) 645, 717, 1170, 1242, 1369, 2203, 2413
BstKTI GATC 9 cut(s) 27, 151, 409, 1280, 1432, 1579, 2446, 2557, 3019
BstMAI GTCTC 4 cut(s) 606, 1925, 1956, 2794
BstMBI GATC 9 cut(s) 24, 148, 406, 1277, 1429, 1576, 2443, 2554, 3016
BstMWI GCNNNNNNNGC 9 cut(s) 118, 122, 131, 259, 331, 388, 397, 2999, 3008
BstNI CCWGG 1 cut(s) 178
BstNSI RCATGY 2 cut(s) 205, 1594
BstSCI CCNGG 2 cut(s) 176, 1539
BstSLI GKGCMC 1 cut(s) 1385
BstV1I GCAGC 6 cut(s) 318, 1086, 1899, 2397, 2720, 3028
BstV2I GAAGAC 4 cut(s) 823, 1314, 2439, 2459
BstX2I RGATCY 4 cut(s) 148, 406, 1429, 1576
BstXI CCANNNNNNTGG 2 cut(s) 857, 1163
BstYI RGATCY 4 cut(s) 148, 406, 1429, 1576
BstZ17I GTATAC 1 cut(s) 2758
Bsu15I ATCGAT 1 cut(s) 1493
BsuRI GGCC 4 cut(s) 663, 1383, 1617, 2598
BsuTUI ATCGAT 1 cut(s) 1493
BtgI CCRYGG 4 cut(s) 1411, 1669, 2010, 2245
BtgZI GCGATG 1 cut(s) 116
BtrI CACGTC 1 cut(s) 219
BtsCI GGATG 7 cut(s) 645, 717, 1170, 1242, 1369, 2203, 2413
BtsI GCAGTG 2 cut(s) 57, 2941
BtsIMutI CAGTG 7 cut(s) 52, 57, 855, 1618, 2805, 2862, 2941
BveI ACCTGC 1 cut(s) 267
Cac8I GCNNGC 3 cut(s) 114, 123, 2158
CciI TCATGA 1 cut(s) 1293
Cfr13I GGNCC 6 cut(s) 256, 574, 861, 1381, 1382, 1674
ClaI ATCGAT 1 cut(s) 1493
CseI GACGC 1 cut(s) 2897
Csp6I GTAC 4 cut(s) 938, 1823, 2176, 2450
CviQI GTAC 4 cut(s) 938, 1823, 2176, 2450
DdeI CTNAG 7 cut(s) 249, 308, 317, 1565, 2134, 2398, 2877
DpnI GATC 9 cut(s) 26, 150, 408, 1279, 1431, 1578, 2445, 2556, 3018
DpnII GATC 9 cut(s) 24, 148, 406, 1277, 1429, 1576, 2443, 2554, 3016
DraI TTTAAA 1 cut(s) 1905
DriI GACNNNNNGTC 1 cut(s) 222
EaeI YGGCCR 2 cut(s) 661, 2596
Eam1104I CTCTTC 5 cut(s) 748, 819, 1526, 2001, 2792
Eam1105I GACNNNNNGTC 1 cut(s) 222
EarI CTCTTC 5 cut(s) 748, 819, 1526, 2001, 2792
Ecl136II GAGCTC 2 cut(s) 72, 174
Eco130I CCWWGG 6 cut(s) 585, 1273, 1411, 1618, 2010, 2245
Eco24I GRGCYC 3 cut(s) 74, 176, 1385
Eco31I GGTCTC 2 cut(s) 1925, 2794
Eco47I GGWCC 4 cut(s) 256, 574, 861, 1674
Eco53kI GAGCTC 2 cut(s) 72, 174
Eco57I CTGAAG 4 cut(s) 492, 1377, 2451, 2456
EcoICRI GAGCTC 2 cut(s) 72, 174
EcoO109I RGGNCCY 3 cut(s) 574, 1381, 1382
EcoRI GAATTC 1 cut(s) 2943
EcoRII CCWGG 1 cut(s) 176
EcoT14I CCWWGG 6 cut(s) 585, 1273, 1411, 1618, 2010, 2245
EcoT38I GRGCYC 3 cut(s) 74, 176, 1385
ErhI CCWWGG 6 cut(s) 585, 1273, 1411, 1618, 2010, 2245
Esp3I CGTCTC 1 cut(s) 606
FalI AAGNNNNNCTT 4 cut(s) 2172, 2204, 2196, 2228
FaqI GGGAC 4 cut(s) 99, 560, 582, 1105
FauNDI CATATG 1 cut(s) 2101
FblI GTMKAC 2 cut(s) 226, 2757
Fnu4HI GCNGC 6 cut(s) 332, 1075, 1888, 2411, 2709, 3042
FokI GGATG 7 cut(s) 632, 704, 1157, 1229, 1376, 2210, 2400
FriOI GRGCYC 3 cut(s) 74, 176, 1385
Fsp4HI GCNGC 6 cut(s) 332, 1075, 1888, 2411, 2709, 3042
FspBI CTAG 4 cut(s) 614, 1718, 2000, 2480
GluI GCNGC 6 cut(s) 332, 1075, 1888, 2411, 2709, 3042
GsaI CCCAGC 1 cut(s) 1067
GsuI CTGGAG 3 cut(s) 1620, 1851, 2697
HaeIII GGCC 4 cut(s) 663, 1383, 1617, 2598
HapII CCGG 1 cut(s) 1541
HgaI GACGC 1 cut(s) 2897
HincII GTYRAC 3 cut(s) 227, 841, 2742
HindII GTYRAC 3 cut(s) 227, 841, 2742
HindIII AAGCTT 3 cut(s) 953, 1262, 2280
HinfI GANTC 9 cut(s) 87, 185, 943, 1189, 1479, 1708, 1776, 2920, 3005
HpaII CCGG 1 cut(s) 1541
HphI GGTGA 6 cut(s) 227, 1025, 1207, 1757, 2762, 2834
Hpy166II GTNNAC 7 cut(s) 227, 841, 1571, 2176, 2742, 2758, 2790
Hpy8I GTNNAC 7 cut(s) 227, 841, 1571, 2176, 2742, 2758, 2790
Hpy99I CGWCG 1 cut(s) 231
HpyCH4III ACNGT 2 cut(s) 562, 2326
HpyCH4IV ACGT 5 cut(s) 165, 218, 837, 885, 2571
HpyF10VI GCNNNNNNNGC 9 cut(s) 118, 122, 131, 259, 331, 388, 397, 2999, 3008
HpyF3I CTNAG 7 cut(s) 249, 308, 317, 1565, 2134, 2398, 2877
HpySE526I ACGT 5 cut(s) 165, 218, 837, 885, 2571
KpnI GGTACC 2 cut(s) 941, 1826
Kzo9I GATC 9 cut(s) 24, 148, 406, 1277, 1429, 1576, 2443, 2554, 3016
LmnI GCTCC 5 cut(s) 69, 179, 2249, 2394, 2716
Lsp1109I GCAGC 6 cut(s) 318, 1086, 1899, 2397, 2720, 3028
LweI GCATC 5 cut(s) 726, 1179, 2422, 3028, 3053
MaeI CTAG 4 cut(s) 614, 1718, 2000, 2480
MaeII ACGT 5 cut(s) 165, 218, 837, 885, 2571
MalI GATC 9 cut(s) 26, 150, 408, 1279, 1431, 1578, 2445, 2556, 3018
MboI GATC 9 cut(s) 24, 148, 406, 1277, 1429, 1576, 2443, 2554, 3016
MfeI CAATTG 3 cut(s) 665, 1421, 2697
MflI RGATCY 4 cut(s) 148, 406, 1429, 1576
MhlI GDGCHC 4 cut(s) 74, 176, 1385, 2072
MlsI TGGCCA 2 cut(s) 663, 2598
MluNI TGGCCA 2 cut(s) 663, 2598
MlyI GAGTC 2 cut(s) 81, 1473
MmeI TCCRAC 5 cut(s) 47, 1341, 1407, 2662, 2760
Mox20I TGGCCA 2 cut(s) 663, 2598
MscI TGGCCA 2 cut(s) 663, 2598
MslI CAYNNNNRTG 2 cut(s) 2810, 2934
Msp20I TGGCCA 2 cut(s) 663, 2598
MspCI CTTAAG 3 cut(s) 1018, 1327, 2437
MspI CCGG 1 cut(s) 1541
MspR9I CCNGG 2 cut(s) 178, 1541
MunI CAATTG 3 cut(s) 665, 1421, 2697
Mva1269I GAATGC 3 cut(s) 103, 1412, 2769
MvaI CCWGG 1 cut(s) 178
MwoI GCNNNNNNNGC 9 cut(s) 118, 122, 131, 259, 331, 388, 397, 2999, 3008
NciI CCSGG 1 cut(s) 1541
NcoI CCATGG 3 cut(s) 1411, 2010, 2245
NdeI CATATG 1 cut(s) 2101
NdeII GATC 9 cut(s) 24, 148, 406, 1277, 1429, 1576, 2443, 2554, 3016
NmeAIII GCCGAG 1 cut(s) 2296
NmuCI GTSAC 4 cut(s) 214, 244, 886, 1013
NspI RCATGY 2 cut(s) 205, 1594
PagI TCATGA 1 cut(s) 1293
PciI ACATGT 1 cut(s) 1590
PctI GAATGC 3 cut(s) 103, 1412, 2769
PfeI GAWTC 7 cut(s) 185, 943, 1189, 1708, 1776, 2920, 3005
PflMI CCANNNNNTGG 2 cut(s) 2423, 2720
PfoI TCCNGGA 1 cut(s) 176
PkrI GCNGC 6 cut(s) 333, 1076, 1889, 2412, 2710, 3043
PleI GAGTC 2 cut(s) 81, 1473
PpsI GAGTC 2 cut(s) 81, 1473
PpuMI RGGWCCY 1 cut(s) 574
PscI ACATGT 1 cut(s) 1590
PsiI TTATAA 2 cut(s) 735, 2321
Psp124BI GAGCTC 2 cut(s) 74, 176
Psp1406I AACGTT 1 cut(s) 2571
Psp5II RGGWCCY 1 cut(s) 574
Psp6I CCWGG 1 cut(s) 176
PspFI CCCAGC 1 cut(s) 1063
PspGI CCWGG 1 cut(s) 176
PspOMI GGGCCC 1 cut(s) 1381
PspPI GGNCC 6 cut(s) 256, 574, 861, 1381, 1382, 1674
PspPPI RGGWCCY 1 cut(s) 574
PsuI RGATCY 4 cut(s) 148, 406, 1429, 1576
RsaI GTAC 4 cut(s) 939, 1824, 2177, 2451
RsaNI GTAC 4 cut(s) 938, 1823, 2176, 2450
RseI CAYNNNNRTG 2 cut(s) 2810, 2934
SacI GAGCTC 2 cut(s) 74, 176
SalI GTCGAC 1 cut(s) 225
SatI GCNGC 6 cut(s) 332, 1075, 1888, 2411, 2709, 3042
Sau3AI GATC 9 cut(s) 24, 148, 406, 1277, 1429, 1576, 2443, 2554, 3016
Sau96I GGNCC 6 cut(s) 256, 574, 861, 1381, 1382, 1674
SchI GAGTC 2 cut(s) 81, 1473
ScrFI CCNGG 2 cut(s) 178, 1541
SduI GDGCHC 4 cut(s) 74, 176, 1385, 2072
SfaNI GCATC 5 cut(s) 726, 1179, 2422, 3028, 3053
SinI GGWCC 4 cut(s) 256, 574, 861, 1674
SmiMI CAYNNNNRTG 2 cut(s) 2810, 2934
SmlI CTYRAG 7 cut(s) 1018, 1327, 1355, 1376, 2437, 2558, 2965
SmoI CTYRAG 7 cut(s) 1018, 1327, 1355, 1376, 2437, 2558, 2965
SsiI CCGC 3 cut(s) 365, 1002, 3009
SspI AATATT 5 cut(s) 879, 994, 1315, 2293, 2976
SspMI CTAG 4 cut(s) 614, 1718, 2000, 2480
SstI GAGCTC 2 cut(s) 74, 176
StyD4I CCNGG 2 cut(s) 176, 1539
StyI CCWWGG 6 cut(s) 585, 1273, 1411, 1618, 2010, 2245
TaaI ACNGT 2 cut(s) 562, 2326
TaiI ACGT 5 cut(s) 168, 221, 840, 888, 2574
TaqI TCGA 7 cut(s) 226, 527, 825, 1131, 1493, 2255, 3019
TatI WGTACW 1 cut(s) 2175
TfiI GAWTC 7 cut(s) 185, 943, 1189, 1708, 1776, 2920, 3005
TscAI CASTG 7 cut(s) 52, 57, 862, 1618, 2812, 2869, 2941
TseFI GTSAC 4 cut(s) 214, 244, 886, 1013
TseI GCWGC 6 cut(s) 331, 1074, 1887, 2410, 2708, 3041
Tsp45I GTSAC 4 cut(s) 214, 244, 886, 1013
TspGWI ACGGA 2 cut(s) 1308, 2668
TspRI CASTG 7 cut(s) 52, 57, 862, 1618, 2812, 2869, 2941
Van91I CCANNNNNTGG 2 cut(s) 2423, 2720
Vha464I CTTAAG 3 cut(s) 1018, 1327, 2437
VpaK11BI GGWCC 4 cut(s) 256, 574, 861, 1674
XceI RCATGY 2 cut(s) 205, 1594
XcmI CCANNNNNNNNNTGG 1 cut(s) 688
XmiI GTMKAC 2 cut(s) 226, 2757
XspI CTAG 4 cut(s) 614, 1718, 2000, 2480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.