MD00G1012100.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
1486932 .. 1490423
3492 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1012100.v1.1.491

Sequence Viewer

Length: 3063 bp
ATGGTTCCAGTCAGCTCCTGGAATCAAGTGTTCGTTTGCTGTTGGAGCTCCCTACAATCGGGACTCGGAGGGAATGCGACGGATAGGTTGGCGTTGCTTGCCATCAAAGCTCAAATAAAGCAAGATCTCCATAATTACAACGTGATGAGCTCCTGGAACGAATCCACGCACTTTTGCATGTGGCATGGTGTGGCGTGCAGTCGACGACATCACCAAAGGGTCACTAAGCTGGACCTGCAATCTCAAAATCTGGTAGGGAAACTATCCCCAAACATAGGAAATCTAAGTTTTCTAAGGGAGCTGTGGCTCCAAAACAACAGCTTCAGTCATGAAATTCCTCCACAAATTGGGAATTTGCATAGATTGCATGTATTGCGATTAGACGTTAACTCGTTTAGTGGCAGTATTCCTCACAATATATCATATTGCTTCAACCTTATCCATGTGAATTTCTCTCGCAACAAGTTGGTGGGTAAAATTCCTTCAAAAATTGGATTGTTGTCGAAGCTGCAAAAATTTTCATTAATCTTTAATAATATAACGGGACAGGTCCCTCCTTCTTTTGGGAACCTTTCGTCTCTATGGGGACTAGATATTGTTAATAATAACTTGATGGGAAACATCCCCAGTTCTCTTGGCCAATTGAAAAAATTAACCTTCTTGGGATTGGGGTTAAATCAGTTGTCTGGTAGCATCCCTTCCTCCATTTATAACCTCTCTTCTCTTGGTACATTTTCCATGCCATTTAACCAAATTCAAGGAAGTATTCCATCAGATATTGGCAGAAGTCTTCCTAATCTCGAAATCTTCAACTTCGGCAGCAACCAACTCACTGGGTCCATACCTCCCTCAATATTCAACGTCACTAGTGTTTGGTTATTTGAAGTTGAGGGTAACAACCTAATCGGACAGGTGCCGAATCTCCAAAAGCTTCACAACCTCCTGTATTTCAACATTCAATTTAATAATATTGGAAGCGGTAAAGATGGTGACTTATGTTTTCTCTCGGACTTGACCAATGCCACGCAGTTAAAAGACTTGGTGATTAACAGCAACAATTTTGGAGGGACATTGCCTATGTCAGTATGCAATCTCTCAACCAAACTTGAATTGTTTTGGGTTGGCGGTAACCAAATATATGGAAGCATCCCATCTGGGATAGGGAATCTGGTGAGCTTGCAATCGTTGTATTTGGGGAATAATAGCTTCACAGGTAACATCCCCTCTGACATGGGTAAGCTTTCAAACCTTGGAAGATTAGATATTTTCATGACCAAATTATCCGGAAATATTCCGTCTTCCTTAGGAAATTTAACCAGGTTATACTATCTTGGGTTGGATGGAAATTATCTTGAGGGCAGCATTCCTTCAGGTCTGGGTGAATGCCATGGGTTGCAAGCGTTGAATCTTTCTTATAACCTTCTTAACGGCACAATACCCAAACAAGTTTTTAGACTCTCCTCCTTATCGATTTCTTTGGACTTGTCTAATAACCTCTTCACAGGTTCCCTTTCCCCGGAGGTTGGGAATTTCCATAGTCTAAGTGAACTGGATCTTTCTGATAACATGTTATCTGGAGAACTCCCCAGTAGCCTTGGTGGTTGTGAGAGTTTAGAAGTCCTGCATTTGCAAGGAAACTTCTTCAACGGGTCCATTCCTTTGTCTATGAGTTCAGTGAGAGGGATTCGAGATCTAGACCTTTCTCGCAATAATTTTTCAGGTGAAATTCCAAATTTTTTAGAAGGCTTTAGAATCCTGAGTAATCTGAACTTATCATTCAATCAATTTTGGGGAGTGGTACCAACTGGAGGTGTTTTCAAAAATGCGAGTGCTATTTCAGTTGTTGGCAACACTAATCTGTGCAGCCATGTTGCTAATTTAAAGCTTCCCAAGTGCAAGTCTAAAGAGACCAAGAAACGAAGATTGTCTCGTAGCTTGAAACTAATACTCCCTTTAGTATTTGGACTTGCTCTTCTAGGAATAGCCATGGTGTTCTCCTATTTCTTTCTTTGTTCGTCAAGGAAGAAAAGGAAAGAAATTTCATTAAGCACTTTGGGGAACACTATTTTGCAAGTGTCATATGCTACTCTACTCAAAGTTACTGATGGGTTCTCAGAGGCTAATTTAATTGGTGCTGGTAGTTTTGGGTCTGTGTACAAAGGAGTTCTTGATGAGGATGATAAAGCTCAACTTGTTGCCGTGAAGGTGTTTAACTTGTTACGCCATGGAGCTTCGAGGAGTTTCATAGCCGAATGTGAAGCTTTGAGAAATATTAGGCACCGAAATCTCGTCAAGATTATAACCGTGTGTTCAAGTGTTGATTTTCGTGGTAATGATTTCAAAGCTCTAGTTTATGAATTCATGGACAACGGGAGCTTAGAGGAGTGGCTGCATCCACCTACTGGAACTGAAGAGTTAAGAGATCATGTACCCAAGAATTTACGTCTTCTTCAGAGGCTAGAAATTGCCATTGGTGTTGCTTGTGCACTGGATTATCTTCATAATCATTGTGAAATGCCAATAGTTCATTGTGATCTCAAGCCAAGCAACGTTCTCTTGGACAACGAATTGACTGGGCATGTTTCAGACTTTGGATTAGTAAGGTTTCTCTCACAATTAACGAGTAATGTTTCAGCAATTCAGAGTCAGACAAGTTCCGTTGGAATAAGAGGAACGGTTGGTTATGCAGCTCCAGAGTATGGCATGGGGAGTGAGGTGTCAACGAATGGTGATGTCTACAGCTTTGGCATTCTTTTGTTGGAGATGTTTACAGGGAAGAGACCAACTGACAACATGTTTGGTGATAACTTGAACCTTCATAATTTTGTCAAGATGGCTTTCCCCGGGCAAATTACTGAGATTGCAGACGCACCACTTCTCGAAGGAGGCACGAACAAGAATCCCAATCAATGCAGTGGGAGAACTCATAAAGTTGAGGTGTGCTTAAGTTCAATATTTAGAATTGGAATTGCTTGTTCTGCTGAATCCGCAACAGATCGACTGAAGAATATCAATGACGCTGCATCTGAACTTCATTCCATTAGGAATACTTTTCTTGGATAG

Protein Analysis

1021

Amino Acids

111.5

Weight (kDa)

8.26

Isoelectric Point (pI)

38.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 67 1e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 73 - 176 3.4e-07 Leucine-rich repeat region
Pkinase PF00069 706 - 944 6.6e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 708 - 937 3.8e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 711, 1416, 2300
Acc36I ACCTGC 1 cut(s) 243
Acc65I GGTACC 1 cut(s) 1798
AccB1I GGYRCC 3 cut(s) 913, 1798, 2277
AccB7I CCANNNNNTGG 3 cut(s) 347, 2402, 2699
AccI GTMKAC 2 cut(s) 202, 2736
AccIII TCCGGA 1 cut(s) 1283
AciI CCGC 3 cut(s) 978, 1125, 2988
AclI AACGTT 1 cut(s) 2550
AclWI GGATC 1 cut(s) 1560
AcoI YGGCCR 1 cut(s) 637
AcuI CTGAAG 5 cut(s) 307, 1353, 2430, 2435, 3023
AfaI GTAC 4 cut(s) 730, 1800, 2156, 2430
AfiI CCNNNNNNNGG 9 cut(s) 58, 275, 347, 563, 1516, 1523, 1808, 2402, 2699
AflII CTTAAG 1 cut(s) 2944
AflIII ACRYGT 2 cut(s) 1566, 2793
AhlI ACTAGT 1 cut(s) 866
AjnI CCWGG 3 cut(s) 17, 152, 1316
AjuI GAANNNNNNNTTGG 2 cut(s) 2454, 2486
Alw21I GWGCWC 3 cut(s) 50, 152, 2488
Alw26I GTCTC 4 cut(s) 582, 1901, 1932, 2773
Alw44I GTGCAC 1 cut(s) 2484
AlwI GGATC 1 cut(s) 1560
AlwNI CAGNNNCTG 1 cut(s) 18
Ama87I CYCGRG 1 cut(s) 2843
Aor13HI TCCGGA 1 cut(s) 1283
AoxI GGCC 1 cut(s) 637
ApaLI GTGCAC 1 cut(s) 2484
ApeKI GCWGC 7 cut(s) 508, 819, 1359, 1863, 2389, 2687, 3020
ArsI GACNNNNNNTTYG 2 cut(s) 2780, 2812
AseI ATTAAT 1 cut(s) 524
Asp718I GGTACC 1 cut(s) 1798
AspS9I GGNCC 4 cut(s) 232, 550, 837, 1650
AsuC2I CCSGG 3 cut(s) 1517, 2844, 2845
AsuHPI GGTGA 8 cut(s) 203, 1001, 1054, 1183, 1391, 1733, 2741, 2813
AvaI CYCGRG 1 cut(s) 2843
AvaII GGWCC 4 cut(s) 232, 550, 837, 1650
AxyI CCTNAGG 1 cut(s) 1303
BaeGI GKGCMC 1 cut(s) 2488
BalI TGGCCA 1 cut(s) 639
BanI GGYRCC 3 cut(s) 913, 1798, 2277
BanII GRGCYC 2 cut(s) 50, 152
BarI GAAGNNNNNNTAC 4 cut(s) 466, 498, 682, 714
BbsI GAAGAC 3 cut(s) 782, 1290, 2438
Bbv12I GWGCWC 3 cut(s) 50, 152, 2488
BbvI GCAGC 7 cut(s) 495, 831, 1371, 1875, 2376, 2699, 3007
BccI CCATC 8 cut(s) 110, 607, 778, 980, 1159, 1334, 2099, 2827
BceAI ACGGC 2 cut(s) 1444, 2183
BciT130I CCWGG 3 cut(s) 19, 154, 1318
BcnI CCSGG 3 cut(s) 1517, 2844, 2845
BcoDI GTCTC 4 cut(s) 582, 1901, 1932, 2773
BcuI ACTAGT 1 cut(s) 866
BfaI CTAG 6 cut(s) 590, 867, 1694, 1976, 2348, 2459
BfmI CTRYAG 1 cut(s) 2737
BfrI CTTAAG 1 cut(s) 2944
BfuAI ACCTGC 1 cut(s) 243
BglII AGATCT 2 cut(s) 124, 1690
BisI GCNGC 7 cut(s) 509, 820, 1360, 1864, 2390, 2688, 3021
BlsI GCNGC 7 cut(s) 510, 821, 1361, 1865, 2391, 2689, 3022
Bme1390I CCNGG 6 cut(s) 19, 154, 1318, 1517, 2844, 2845
Bme18I GGWCC 4 cut(s) 232, 550, 837, 1650
BmeT110I CYCGRG 1 cut(s) 2843
BmgT120I GGNCC 4 cut(s) 232, 550, 837, 1650
BmrFI CCNGG 6 cut(s) 19, 154, 1318, 1517, 2844, 2845
BmrI ACTGGG 4 cut(s) 621, 843, 1581, 2583
BmsI GCATC 4 cut(s) 702, 1155, 2401, 3032
BmuI ACTGGG 4 cut(s) 621, 843, 1581, 2583
BpiI GAAGAC 3 cut(s) 782, 1290, 2438
BpmI CTGGAG 3 cut(s) 1596, 1827, 2676
BpuEI CTTGAG 2 cut(s) 1373, 2522
BpuMI CCSGG 3 cut(s) 1517, 2844, 2845
Bsa29I ATCGAT 1 cut(s) 1469
BsaI GGTCTC 2 cut(s) 1901, 2773
BsaJI CCNNGG 8 cut(s) 1249, 1387, 1515, 1594, 1986, 2224, 2842, 2843
BsaWI WCCGGW 1 cut(s) 1283
BsaXI ACNNNNNCTCC 2 cut(s) 1932, 1962
Bsc4I CCNNNNNNNGG 9 cut(s) 58, 275, 347, 563, 1516, 1523, 1808, 2402, 2699
Bse1I ACTGG 9 cut(s) 8, 627, 838, 1554, 1587, 1810, 2407, 2493, 2578
Bse21I CCTNAGG 1 cut(s) 1303
Bse3DI GCAATG 1 cut(s) 1070
BseAI TCCGGA 1 cut(s) 1283
BseBI CCWGG 3 cut(s) 19, 154, 1318
BseCI ATCGAT 1 cut(s) 1469
BseDI CCNNGG 8 cut(s) 1249, 1387, 1515, 1594, 1986, 2224, 2842, 2843
BseGI GGATG 7 cut(s) 621, 693, 1146, 1218, 1345, 2182, 2392
BseLI CCNNNNNNNGG 9 cut(s) 58, 275, 347, 563, 1516, 1523, 1808, 2402, 2699
BseMI GCAATG 1 cut(s) 1070
BseMII CTCAG 3 cut(s) 1748, 2127, 2847
BseNI ACTGG 9 cut(s) 8, 627, 838, 1554, 1587, 1810, 2407, 2493, 2578
BseRI GAGGAG 3 cut(s) 1450, 2251, 2396
BseSI GKGCMC 1 cut(s) 2488
BseXI GCAGC 7 cut(s) 495, 831, 1371, 1875, 2376, 2699, 3007
BsgI GTGCAG 2 cut(s) 217, 1882
BshFI GGCC 1 cut(s) 639
BshNI GGYRCC 3 cut(s) 913, 1798, 2277
BshVI ATCGAT 1 cut(s) 1469
BsiHKAI GWGCWC 3 cut(s) 50, 152, 2488
BsiHKCI CYCGRG 1 cut(s) 2843
BsiSI CCGG 3 cut(s) 1284, 1517, 2844
BslFI GGGAC 5 cut(s) 75, 536, 558, 600, 1081
BslI CCNNNNNNNGG 9 cut(s) 58, 275, 347, 563, 1516, 1523, 1808, 2402, 2699
BsmAI GTCTC 4 cut(s) 582, 1901, 1932, 2773
BsmBI CGTCTC 1 cut(s) 582
BsmFI GGGAC 5 cut(s) 75, 536, 558, 600, 1081
BsmI GAATGC 4 cut(s) 79, 1362, 1388, 2748
BsnI GGCC 1 cut(s) 639
Bso31I GGTCTC 2 cut(s) 1901, 2773
BsoBI CYCGRG 1 cut(s) 2843
Bsp1286I GDGCHC 3 cut(s) 50, 152, 2488
Bsp13I TCCGGA 1 cut(s) 1283
Bsp1407I TGTACA 1 cut(s) 2154
Bsp143I GATC 6 cut(s) 124, 1552, 1690, 2422, 2533, 2995
Bsp19I CCATGG 3 cut(s) 1387, 1986, 2224
BspACI CCGC 3 cut(s) 978, 1125, 2988
BspANI GGCC 1 cut(s) 639
BspCNI CTCAG 3 cut(s) 1749, 2126, 2848
BspDI ATCGAT 1 cut(s) 1469
BspEI TCCGGA 1 cut(s) 1283
BspHI TCATGA 2 cut(s) 328, 1269
BspMI ACCTGC 1 cut(s) 243
BspPI GGATC 1 cut(s) 1560
BspQI GCTCTTC 1 cut(s) 1977
BspT107I GGYRCC 3 cut(s) 913, 1798, 2277
BspTI CTTAAG 1 cut(s) 2944
BspTNI GGTCTC 2 cut(s) 1901, 2773
BsrDI GCAATG 1 cut(s) 1070
BsrGI TGTACA 1 cut(s) 2154
BsrI ACTGG 9 cut(s) 8, 627, 838, 1554, 1587, 1810, 2407, 2493, 2578
BssECI CCNNGG 8 cut(s) 1249, 1387, 1515, 1594, 1986, 2224, 2842, 2843
BssMI GATC 6 cut(s) 124, 1552, 1690, 2422, 2533, 2995
BssT1I CCWWGG 5 cut(s) 1249, 1387, 1594, 1986, 2224
Bst2UI CCWGG 3 cut(s) 19, 154, 1318
Bst4CI ACNGT 2 cut(s) 2305, 2677
Bst6I CTCTTC 5 cut(s) 724, 1502, 1977, 2406, 2771
BstAFI CTTAAG 1 cut(s) 2944
BstAPI GCANNNNNTGC 2 cut(s) 364, 373
BstAUI TGTACA 1 cut(s) 2154
BstC8I GCNNGC 4 cut(s) 99, 196, 1178, 1398
BstDEI CTNAG 9 cut(s) 225, 284, 293, 1303, 1541, 1757, 2113, 2377, 2856
BstDSI CCRYGG 3 cut(s) 1387, 1986, 2224
BstEII GGTNACC 1 cut(s) 1127
BstF5I GGATG 7 cut(s) 621, 693, 1146, 1218, 1345, 2182, 2392
BstKTI GATC 6 cut(s) 127, 1555, 1693, 2425, 2536, 2998
BstMAI GTCTC 4 cut(s) 582, 1901, 1932, 2773
BstMBI GATC 6 cut(s) 124, 1552, 1690, 2422, 2533, 2995
BstMWI GCNNNNNNNGC 8 cut(s) 45, 98, 107, 235, 364, 373, 2978, 2987
BstNI CCWGG 3 cut(s) 19, 154, 1318
BstNSI RCATGY 5 cut(s) 181, 371, 1570, 2582, 2797
BstPI GGTNACC 1 cut(s) 1127
BstSCI CCNGG 6 cut(s) 17, 152, 1316, 1515, 2842, 2843
BstSFI CTRYAG 1 cut(s) 2737
BstSLI GKGCMC 1 cut(s) 2488
BstV1I GCAGC 7 cut(s) 495, 831, 1371, 1875, 2376, 2699, 3007
BstV2I GAAGAC 3 cut(s) 782, 1290, 2438
BstX2I RGATCY 3 cut(s) 124, 1552, 1690
BstXI CCANNNNNNTGG 2 cut(s) 833, 1139
BstYI RGATCY 3 cut(s) 124, 1552, 1690
Bsu15I ATCGAT 1 cut(s) 1469
Bsu36I CCTNAGG 1 cut(s) 1303
BsuRI GGCC 1 cut(s) 639
BsuTUI ATCGAT 1 cut(s) 1469
BtgI CCRYGG 3 cut(s) 1387, 1986, 2224
BtsCI GGATG 7 cut(s) 621, 693, 1146, 1218, 1345, 2182, 2392
BtsI GCAGTG 1 cut(s) 2920
BtsIMutI CAGTG 4 cut(s) 831, 1680, 2486, 2920
BveI ACCTGC 1 cut(s) 243
Cac8I GCNNGC 4 cut(s) 99, 196, 1178, 1398
CaiI CAGNNNCTG 1 cut(s) 18
CciI TCATGA 2 cut(s) 328, 1269
Cfr13I GGNCC 4 cut(s) 232, 550, 837, 1650
Cfr9I CCCGGG 1 cut(s) 2843
ClaI ATCGAT 1 cut(s) 1469
CseI GACGC 2 cut(s) 2876, 3026
CsiI ACCWGGT 1 cut(s) 1316
Csp6I GTAC 4 cut(s) 729, 1799, 2155, 2429
CviQI GTAC 4 cut(s) 729, 1799, 2155, 2429
DdeI CTNAG 9 cut(s) 225, 284, 293, 1303, 1541, 1757, 2113, 2377, 2856
DpnI GATC 6 cut(s) 126, 1554, 1692, 2424, 2535, 2997
DpnII GATC 6 cut(s) 124, 1552, 1690, 2422, 2533, 2995
DraI TTTAAA 1 cut(s) 1881
EaeI YGGCCR 1 cut(s) 637
Eam1104I CTCTTC 5 cut(s) 724, 1502, 1977, 2406, 2771
EarI CTCTTC 5 cut(s) 724, 1502, 1977, 2406, 2771
Ecl136II GAGCTC 2 cut(s) 48, 150
Eco130I CCWWGG 5 cut(s) 1249, 1387, 1594, 1986, 2224
Eco24I GRGCYC 2 cut(s) 50, 152
Eco31I GGTCTC 2 cut(s) 1901, 2773
Eco47I GGWCC 4 cut(s) 232, 550, 837, 1650
Eco53kI GAGCTC 2 cut(s) 48, 150
Eco57I CTGAAG 5 cut(s) 307, 1353, 2430, 2435, 3023
Eco81I CCTNAGG 1 cut(s) 1303
Eco88I CYCGRG 1 cut(s) 2843
Eco91I GGTNACC 1 cut(s) 1127
EcoICRI GAGCTC 2 cut(s) 48, 150
EcoO109I RGGNCCY 1 cut(s) 550
EcoO65I GGTNACC 1 cut(s) 1127
EcoRI GAATTC 1 cut(s) 2357
EcoRII CCWGG 3 cut(s) 17, 152, 1316
EcoT14I CCWWGG 5 cut(s) 1249, 1387, 1594, 1986, 2224
EcoT38I GRGCYC 2 cut(s) 50, 152
ErhI CCWWGG 5 cut(s) 1249, 1387, 1594, 1986, 2224
Esp3I CGTCTC 1 cut(s) 582
FalI AAGNNNNNCTT 4 cut(s) 2151, 2183, 2175, 2207
FaqI GGGAC 5 cut(s) 75, 536, 558, 600, 1081
FauNDI CATATG 1 cut(s) 2080
FblI GTMKAC 2 cut(s) 202, 2736
Fnu4HI GCNGC 7 cut(s) 509, 820, 1360, 1864, 2390, 2688, 3021
FokI GGATG 7 cut(s) 608, 680, 1133, 1205, 1352, 2189, 2379
FriOI GRGCYC 2 cut(s) 50, 152
Fsp4HI GCNGC 7 cut(s) 509, 820, 1360, 1864, 2390, 2688, 3021
FspBI CTAG 6 cut(s) 590, 867, 1694, 1976, 2348, 2459
GluI GCNGC 7 cut(s) 509, 820, 1360, 1864, 2390, 2688, 3021
GsuI CTGGAG 3 cut(s) 1596, 1827, 2676
HaeIII GGCC 1 cut(s) 639
HapII CCGG 3 cut(s) 1284, 1517, 2844
HgaI GACGC 2 cut(s) 2876, 3026
HincII GTYRAC 3 cut(s) 203, 388, 2721
HindII GTYRAC 3 cut(s) 203, 388, 2721
HindIII AAGCTT 4 cut(s) 929, 1238, 1883, 2259
HpaI GTTAAC 1 cut(s) 388
HpaII CCGG 3 cut(s) 1284, 1517, 2844
HphI GGTGA 8 cut(s) 203, 1001, 1054, 1183, 1391, 1733, 2741, 2813
Hpy166II GTNNAC 8 cut(s) 203, 388, 1547, 2155, 2486, 2721, 2737, 2769
Hpy8I GTNNAC 8 cut(s) 203, 388, 1547, 2155, 2486, 2721, 2737, 2769
Hpy99I CGWCG 2 cut(s) 82, 207
HpyCH4III ACNGT 2 cut(s) 2305, 2677
HpyCH4IV ACGT 5 cut(s) 141, 384, 861, 2443, 2550
HpyF10VI GCNNNNNNNGC 8 cut(s) 45, 98, 107, 235, 364, 373, 2978, 2987
HpyF3I CTNAG 9 cut(s) 225, 284, 293, 1303, 1541, 1757, 2113, 2377, 2856
HpySE526I ACGT 5 cut(s) 141, 384, 861, 2443, 2550
Kpn2I TCCGGA 1 cut(s) 1283
KpnI GGTACC 1 cut(s) 1802
KspAI GTTAAC 1 cut(s) 388
Kzo9I GATC 6 cut(s) 124, 1552, 1690, 2422, 2533, 2995
LguI GCTCTTC 1 cut(s) 1977
LmnI GCTCC 9 cut(s) 20, 45, 53, 155, 298, 312, 2228, 2373, 2695
Lsp1109I GCAGC 7 cut(s) 495, 831, 1371, 1875, 2376, 2699, 3007
LweI GCATC 4 cut(s) 702, 1155, 2401, 3032
MabI ACCWGGT 1 cut(s) 1316
MaeI CTAG 6 cut(s) 590, 867, 1694, 1976, 2348, 2459
MaeII ACGT 5 cut(s) 141, 384, 861, 2443, 2550
MaeIII GTNAC 8 cut(s) 220, 862, 893, 989, 1127, 1214, 2098, 2217
MalI GATC 6 cut(s) 126, 1554, 1692, 2424, 2535, 2997
MboI GATC 6 cut(s) 124, 1552, 1690, 2422, 2533, 2995
MfeI CAATTG 1 cut(s) 641
MflI RGATCY 3 cut(s) 124, 1552, 1690
MhlI GDGCHC 3 cut(s) 50, 152, 2488
MlsI TGGCCA 1 cut(s) 639
MluNI TGGCCA 1 cut(s) 639
MlyI GAGTC 3 cut(s) 57, 1449, 2653
MmeI TCCRAC 4 cut(s) 23, 1317, 2641, 2739
Mox20I TGGCCA 1 cut(s) 639
MroI TCCGGA 1 cut(s) 1283
MscI TGGCCA 1 cut(s) 639
Msp20I TGGCCA 1 cut(s) 639
MspCI CTTAAG 1 cut(s) 2944
MspI CCGG 3 cut(s) 1284, 1517, 2844
MspR9I CCNGG 6 cut(s) 19, 154, 1318, 1517, 2844, 2845
MunI CAATTG 1 cut(s) 641
Mva1269I GAATGC 4 cut(s) 79, 1362, 1388, 2748
MvaI CCWGG 3 cut(s) 19, 154, 1318
MwoI GCNNNNNNNGC 8 cut(s) 45, 98, 107, 235, 364, 373, 2978, 2987
NciI CCSGG 3 cut(s) 1517, 2844, 2845
NcoI CCATGG 3 cut(s) 1387, 1986, 2224
NdeI CATATG 1 cut(s) 2080
NdeII GATC 6 cut(s) 124, 1552, 1690, 2422, 2533, 2995
NmuCI GTSAC 3 cut(s) 220, 862, 989
NspI RCATGY 5 cut(s) 181, 371, 1570, 2582, 2797
PagI TCATGA 2 cut(s) 328, 1269
PciI ACATGT 2 cut(s) 1566, 2793
PciSI GCTCTTC 1 cut(s) 1977
PctI GAATGC 4 cut(s) 79, 1362, 1388, 2748
PfeI GAWTC 9 cut(s) 22, 161, 919, 1165, 1405, 1684, 1752, 2899, 2984
PflMI CCANNNNNTGG 3 cut(s) 347, 2402, 2699
PfoI TCCNGGA 2 cut(s) 17, 152
PkrI GCNGC 7 cut(s) 510, 821, 1361, 1865, 2391, 2689, 3022
PleI GAGTC 3 cut(s) 57, 1449, 2652
PpsI GAGTC 3 cut(s) 57, 1449, 2652
PpuMI RGGWCCY 1 cut(s) 550
PscI ACATGT 2 cut(s) 1566, 2793
PshBI ATTAAT 1 cut(s) 524
PsiI TTATAA 3 cut(s) 711, 1416, 2300
Psp124BI GAGCTC 2 cut(s) 50, 152
Psp1406I AACGTT 1 cut(s) 2550
Psp5II RGGWCCY 1 cut(s) 550
Psp6I CCWGG 3 cut(s) 17, 152, 1316
PspEI GGTNACC 1 cut(s) 1127
PspGI CCWGG 3 cut(s) 17, 152, 1316
PspPI GGNCC 4 cut(s) 232, 550, 837, 1650
PspPPI RGGWCCY 1 cut(s) 550
PstNI CAGNNNCTG 1 cut(s) 18
PsuI RGATCY 3 cut(s) 124, 1552, 1690
RsaI GTAC 4 cut(s) 730, 1800, 2156, 2430
RsaNI GTAC 4 cut(s) 729, 1799, 2155, 2429
SacI GAGCTC 2 cut(s) 50, 152
SalI GTCGAC 1 cut(s) 201
SapI GCTCTTC 1 cut(s) 1977
SatI GCNGC 7 cut(s) 509, 820, 1360, 1864, 2390, 2688, 3021
Sau3AI GATC 6 cut(s) 124, 1552, 1690, 2422, 2533, 2995
Sau96I GGNCC 4 cut(s) 232, 550, 837, 1650
SchI GAGTC 3 cut(s) 57, 1449, 2653
ScrFI CCNGG 6 cut(s) 19, 154, 1318, 1517, 2844, 2845
SduI GDGCHC 3 cut(s) 50, 152, 2488
SexAI ACCWGGT 1 cut(s) 1316
SfaNI GCATC 4 cut(s) 702, 1155, 2401, 3032
SfcI CTRYAG 1 cut(s) 2737
SinI GGWCC 4 cut(s) 232, 550, 837, 1650
SmaI CCCGGG 1 cut(s) 2845
SmlI CTYRAG 3 cut(s) 1352, 2537, 2944
SmoI CTYRAG 3 cut(s) 1352, 2537, 2944
SpeI ACTAGT 1 cut(s) 866
SsiI CCGC 3 cut(s) 978, 1125, 2988
SspI AATATT 5 cut(s) 855, 970, 1291, 2272, 2955
SspMI CTAG 6 cut(s) 590, 867, 1694, 1976, 2348, 2459
SstI GAGCTC 2 cut(s) 50, 152
StyD4I CCNGG 6 cut(s) 17, 152, 1316, 1515, 2842, 2843
StyI CCWWGG 5 cut(s) 1249, 1387, 1594, 1986, 2224
TaaI ACNGT 2 cut(s) 2305, 2677
TaiI ACGT 5 cut(s) 144, 387, 864, 2446, 2553
TaqI TCGA 8 cut(s) 202, 503, 801, 1469, 1687, 2234, 2880, 2998
TatI WGTACW 1 cut(s) 2154
TfiI GAWTC 9 cut(s) 22, 161, 919, 1165, 1405, 1684, 1752, 2899, 2984
TscAI CASTG 4 cut(s) 838, 1680, 2493, 2920
TseFI GTSAC 3 cut(s) 220, 862, 989
TseI GCWGC 7 cut(s) 508, 819, 1359, 1863, 2389, 2687, 3020
Tsp45I GTSAC 3 cut(s) 220, 862, 989
TspGWI ACGGA 3 cut(s) 95, 1284, 2647
TspMI CCCGGG 1 cut(s) 2843
TspRI CASTG 4 cut(s) 838, 1680, 2493, 2920
Van91I CCANNNNNTGG 3 cut(s) 347, 2402, 2699
Vha464I CTTAAG 1 cut(s) 2944
VneI GTGCAC 1 cut(s) 2484
VpaK11BI GGWCC 4 cut(s) 232, 550, 837, 1650
VspI ATTAAT 1 cut(s) 524
XbaI TCTAGA 1 cut(s) 1693
XceI RCATGY 5 cut(s) 181, 371, 1570, 2582, 2797
XcmI CCANNNNNNNNNTGG 1 cut(s) 15
XmaI CCCGGG 1 cut(s) 2843
XmiI GTMKAC 2 cut(s) 202, 2736
XspI CTAG 6 cut(s) 590, 867, 1694, 1976, 2348, 2459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.