MD01G1132300.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
24236601 .. 24239146
2546 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1132300.v1.1.491

Sequence Viewer

Length: 1950 bp
ATGATTGGTCCTTCTGTCAAATTTGTTTTTTTTACCCGTCAAATTTGTCTTCTTACTTGCGGCCAAAGACACCATAGAGTCACGGTGCTGGACCTCCGATCATCCGCGCTGGAAGGTCAGCTATCCCCCCACATTGGAAACTTGAGCTTCCTCAGGACATTGCGCCTTGAAAACAATAGCTTCGGCCACACCATTCCTTCAGAAATTGGTCGTTTGTTCCGCCTGCAACAAATACGCCTTCACAACAACTCCTTCAACAGCGCTATTCCATCAACATATCGTGTTGCTCCAACCTCCAATACCTTCTCTTATATGGAAACAATCCTACTTTATCTGGATCACAATAATCTGCATGGAGGTATTCCAAATAGCCTTGGCCAGTTGAAGAACTTAGCATATCTTGTATTGGGTACTAATAATTTGAATGGTACCATACCTCCTTCAATATACAACCTCTCTTCGATCACATATTTTTCCATGCTTATAAACCAACTTTGCGGAACCCTTCCACCTAGCTTGGGCCACACTATATTTCCAAACATCGAAAAGTTTTATTGCCATATGAACCAATTCAGTGGACCGATACCAGTTTCAGTCGCCAATGCCAACCTTATGCGATTTGTGATCTTAGACAACAAGTTTACAGGCAAAGTGCCTAGTTTGGCAGGCATGTCGAATTTGGTCTGGTTAGGAATCTCGAATAACAGTCTTGGATATAACCAGGAAGGTGACTTGGATTTCCTCTCTTCCCTAGTTAATTGTACAAATCTACAAATTTTATCAATCAGTGACAATAATTTTGGAGGAGTGCTACCTGAGTCTCTCGGAAATCTCTCAACAACGGTCAAGCAAATGATATTCGGAAGGAATTGGATGCGCGGAAACATTCCTGTCAGGGTTGGAAATCTCTTCAACTTGGAGGTACCAGCGTTTGATGCAAACCTATTGACAGGAACTATACCAAGTTCAGTAGCCATATTGGTTCTCATGTCAAACAACTTAGGGAGTTGTACAAGTTTGACAACTCTGTATCTGAGTGGAAACTCATTGGGGGTTTCACTTCTGAAATTGTCCTACGGAGATCTCCTTAAAGCAACTGATGGGTTCTCTGCAGCCAATTTGATTGGTGCTGGTAGTTTTGGGTCCATATATAAGGGAATACTCGATCAGCATGAAGGAAGAGTTGTTGCAGTGAAAGTACTCAATCTTCAAACTTCAAGAGCCACCAAAAGTTTCATTGCTGAATGTGAAGCTCTGAGAACCGTTAGGCACCGAAACCTTGTCAAGCTACTGACCGCCTGTTCAAGCATCGATTTTCAAGGGAATGACTTCAAAGCTTTGGTTTATGATTTCATGGTGAACGGAAGCCTCGAAGAATGGCTGCATAATTCAGCTCAACAGGGTGACAATCGAACCAATCTGCAGAAAAATCTGGATCTTATTCAGAGAGTAAACATTGCAATCGACATAGCAAGTGCTCTGGATTATTTGCACAACGGCTCTGACATGCCAATAGTTCATTGCGATTTAAAGCCGAGCAACATTCTCTTGGATGGTGACATGACTGGATGTGTTGGTGATTTTGGTTTGGCAATGTTCCTCCCAGATGCTTCTCGTCCATTTACTACACAAGAAAGCTCTTCCAATGCAATAAAAGGCACCATAGAGTACGGCAGTGGAACCGCAGTGTCAACATATGGCAACGTGTATAGCTTCAGAATCCTGCTACTGGAGATGTTAACAGGCAAGAGGCGGACTGATGACATGTTTAAAGATGGTCTGGACCTGCACCACTTTGTCTTGACGGCTCTGCCCGAACGTGTGAAAGAAATATGCGATCCCCGGCTCCTTCACACAGAAGAAAGTGGAATTACTACTGCCACGGACAACAGGGGCGATCTGGGCCAAGATGATCAAAGGCAAAGAGCTGACTACTGCCACGGACAATAG

Protein Analysis

650

Amino Acids

71.26

Weight (kDa)

6.52

Isoelectric Point (pI)

38.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 9 - 92 3.7e-06 Leucine-rich repeat region
Pkinase PF00069 372 - 585 4.9e-28 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 373 - 589 1.3e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 485
Acc36I ACCTGC 1 cut(s) 1794
Acc65I GGTACC 2 cut(s) 428, 922
AccB1I GGYRCC 4 cut(s) 428, 922, 1269, 1658
AccII CGCG 2 cut(s) 107, 879
AciI CCGC 8 cut(s) 60, 105, 220, 498, 879, 1296, 1683, 1753
AclWI GGATC 3 cut(s) 345, 1443, 1832
AcoI YGGCCR 3 cut(s) 61, 184, 376
AcsI RAATTY 4 cut(s) 20, 42, 676, 774
AcuI CTGAAG 2 cut(s) 183, 1699
AfaI GTAC 7 cut(s) 412, 430, 763, 924, 1012, 1200, 1670
AfeI AGCGCT 1 cut(s) 262
AfiI CCNNNNNNNGG 3 cut(s) 134, 518, 1729
AflIII ACRYGT 3 cut(s) 1704, 1764, 1819
AjnI CCWGG 1 cut(s) 720
Alw21I GWGCWC 1 cut(s) 1480
Alw26I GTCTC 1 cut(s) 825
AlwI GGATC 3 cut(s) 345, 1443, 1832
Aor51HI AGCGCT 1 cut(s) 262
AoxI GGCC 5 cut(s) 61, 184, 376, 520, 1903
ApeKI GCWGC 2 cut(s) 1112, 1381
ApoI RAATTY 4 cut(s) 20, 42, 676, 774
ArsI GACNNNNNNTTYG 2 cut(s) 782, 814
Asp700I GAANNNNTTC 2 cut(s) 569, 1328
Asp718I GGTACC 2 cut(s) 428, 922
AspLEI GCGC 4 cut(s) 109, 165, 263, 879
AspS9I GGNCC 7 cut(s) 8, 91, 520, 578, 1143, 1783, 1903
AsuC2I CCSGG 1 cut(s) 1843
AsuHPI GGTGA 5 cut(s) 740, 1369, 1415, 1568, 1589
AvaII GGWCC 5 cut(s) 8, 91, 578, 1143, 1783
AxyI CCTNAGG 1 cut(s) 152
BaeI ACNNNNGTAYC 2 cut(s) 914, 947
BalI TGGCCA 1 cut(s) 378
BanI GGYRCC 4 cut(s) 428, 922, 1269, 1658
BarI GAAGNNNNNNTAC 2 cut(s) 1191, 1223
BbsI GAAGAC 1 cut(s) 41
Bbv12I GWGCWC 1 cut(s) 1480
BbvI GCAGC 2 cut(s) 1124, 1368
BccI CCATC 4 cut(s) 277, 1094, 1547, 1769
BceAI ACGGC 3 cut(s) 1513, 1687, 1821
BcgI CGANNNNNNTGC 2 cut(s) 654, 688
BciT130I CCWGG 1 cut(s) 722
BclI TGATCA 1 cut(s) 1912
BcnI CCSGG 1 cut(s) 1843
BcoDI GTCTC 1 cut(s) 825
BfaI CTAG 3 cut(s) 513, 657, 752
BfmI CTRYAG 2 cut(s) 1110, 1421
BfoI RGCGCY 1 cut(s) 264
BfuAI ACCTGC 1 cut(s) 1794
BglII AGATCT 1 cut(s) 1081
BisI GCNGC 3 cut(s) 61, 1113, 1382
BlsI GCNGC 3 cut(s) 62, 1114, 1383
BmcAI AGTACT 1 cut(s) 1200
Bme1390I CCNGG 2 cut(s) 722, 1843
Bme18I GGWCC 5 cut(s) 8, 91, 578, 1143, 1783
BmgT120I GGNCC 7 cut(s) 8, 91, 520, 578, 1143, 1783, 1903
BmiI GGNNCC 8 cut(s) 430, 502, 924, 1144, 1271, 1660, 1681, 1847
BmrFI CCNGG 2 cut(s) 722, 1843
BmsI GCATC 4 cut(s) 864, 925, 1317, 1597
BpiI GAAGAC 1 cut(s) 41
BpmI CTGGAG 1 cut(s) 1751
BpuEI CTTGAG 1 cut(s) 163
BpuMI CCSGG 1 cut(s) 1843
Bsa29I ATCGAT 1 cut(s) 1311
BsaJI CCNNGG 4 cut(s) 373, 1841, 1881, 1939
BsaXI ACNNNNNCTCC 4 cut(s) 233, 263, 421, 451
Bsc4I CCNNNNNNNGG 3 cut(s) 134, 518, 1729
Bse1I ACTGG 4 cut(s) 379, 587, 1570, 1734
Bse21I CCTNAGG 1 cut(s) 152
Bse3DI GCAATG 5 cut(s) 158, 1236, 1455, 1519, 1599
BseBI CCWGG 1 cut(s) 722
BseCI ATCGAT 1 cut(s) 1311
BseDI CCNNGG 4 cut(s) 373, 1841, 1881, 1939
BseGI GGATG 4 cut(s) 101, 879, 1558, 1574
BseLI CCNNNNNNNGG 3 cut(s) 134, 518, 1729
BseMI GCAATG 5 cut(s) 158, 1236, 1455, 1519, 1599
BseMII CTCAG 4 cut(s) 166, 807, 1025, 1247
BseNI ACTGG 4 cut(s) 379, 587, 1570, 1734
BseRI GAGGAG 1 cut(s) 819
BseXI GCAGC 2 cut(s) 1124, 1368
BsgI GTGCAG 1 cut(s) 1772
Bsh1236I CGCG 2 cut(s) 107, 879
BshFI GGCC 5 cut(s) 63, 186, 378, 522, 1905
BshNI GGYRCC 4 cut(s) 428, 922, 1269, 1658
BshVI ATCGAT 1 cut(s) 1311
BsiHKAI GWGCWC 1 cut(s) 1480
BsiSI CCGG 1 cut(s) 1843
BslI CCNNNNNNNGG 3 cut(s) 134, 518, 1729
BsmAI GTCTC 1 cut(s) 825
BsnI GGCC 5 cut(s) 63, 186, 378, 522, 1905
Bsp1286I GDGCHC 1 cut(s) 1480
Bsp1407I TGTACA 2 cut(s) 761, 1010
BspACI CCGC 8 cut(s) 60, 105, 220, 498, 879, 1296, 1683, 1753
BspANI GGCC 5 cut(s) 63, 186, 378, 522, 1905
BspCNI CTCAG 4 cut(s) 165, 808, 1026, 1248
BspDI ATCGAT 1 cut(s) 1311
BspFNI CGCG 2 cut(s) 107, 879
BspLI GGNNCC 8 cut(s) 430, 502, 924, 1144, 1271, 1660, 1681, 1847
BspMAI CTGCAG 2 cut(s) 1114, 1425
BspMI ACCTGC 1 cut(s) 1794
BspPI GGATC 3 cut(s) 345, 1443, 1832
BspQI GCTCTTC 1 cut(s) 1645
BspT107I GGYRCC 4 cut(s) 428, 922, 1269, 1658
BsrDI GCAATG 5 cut(s) 158, 1236, 1455, 1519, 1599
BsrGI TGTACA 2 cut(s) 761, 1010
BsrI ACTGG 4 cut(s) 379, 587, 1570, 1734
BssECI CCNNGG 4 cut(s) 373, 1841, 1881, 1939
BssT1I CCWWGG 1 cut(s) 373
Bst2UI CCWGG 1 cut(s) 722
Bst4CI ACNGT 4 cut(s) 85, 707, 844, 1264
Bst6I CTCTTC 5 cut(s) 463, 751, 914, 1174, 1645
BstAUI TGTACA 2 cut(s) 761, 1010
BstC8I GCNNGC 2 cut(s) 224, 667
BstDEI CTNAG 7 cut(s) 152, 391, 628, 816, 1000, 1034, 1256
BstDSI CCRYGG 2 cut(s) 1881, 1939
BstF5I GGATG 4 cut(s) 101, 879, 1558, 1574
BstFNI CGCG 2 cut(s) 107, 879
BstH2I RGCGCY 1 cut(s) 264
BstHHI GCGC 4 cut(s) 109, 165, 263, 879
BstMAI GTCTC 1 cut(s) 825
BstMWI GCNNNNNNNGC 2 cut(s) 935, 1902
BstNI CCWGG 1 cut(s) 722
BstNSI RCATGY 3 cut(s) 673, 1510, 1768
BstSCI CCNGG 2 cut(s) 720, 1841
BstSFI CTRYAG 2 cut(s) 1110, 1421
BstUI CGCG 2 cut(s) 107, 879
BstV1I GCAGC 2 cut(s) 1124, 1368
BstV2I GAAGAC 1 cut(s) 41
BstX2I RGATCY 2 cut(s) 1081, 1435
BstXI CCANNNNNNTGG 1 cut(s) 575
BstYI RGATCY 2 cut(s) 1081, 1435
Bsu15I ATCGAT 1 cut(s) 1311
Bsu36I CCTNAGG 1 cut(s) 152
BsuRI GGCC 5 cut(s) 63, 186, 378, 522, 1905
BsuTUI ATCGAT 1 cut(s) 1311
BtgI CCRYGG 2 cut(s) 1881, 1939
BtsCI GGATG 4 cut(s) 101, 879, 1558, 1574
BtsI GCAGTG 3 cut(s) 1197, 1681, 1692
BtsIMutI CAGTG 5 cut(s) 580, 793, 1197, 1681, 1692
BveI ACCTGC 1 cut(s) 1794
Cac8I GCNNGC 2 cut(s) 224, 667
CfoI GCGC 4 cut(s) 109, 165, 263, 879
Cfr13I GGNCC 7 cut(s) 8, 91, 520, 578, 1143, 1783, 1903
ClaI ATCGAT 1 cut(s) 1311
Csp6I GTAC 7 cut(s) 411, 429, 762, 923, 1011, 1199, 1669
CspCI CAANNNNNGTGG 2 cut(s) 498, 533
CviAII CATG 9 cut(s) 353, 478, 670, 988, 1172, 1354, 1507, 1561, 1765
CviQI GTAC 7 cut(s) 411, 429, 762, 923, 1011, 1199, 1669
DdeI CTNAG 7 cut(s) 152, 391, 628, 816, 1000, 1034, 1256
DraI TTTAAA 2 cut(s) 1530, 1771
EaeI YGGCCR 3 cut(s) 61, 184, 376
Eam1104I CTCTTC 5 cut(s) 463, 751, 914, 1174, 1645
EarI CTCTTC 5 cut(s) 463, 751, 914, 1174, 1645
EciI GGCGGA 2 cut(s) 209, 1768
Eco130I CCWWGG 1 cut(s) 373
Eco47I GGWCC 5 cut(s) 8, 91, 578, 1143, 1783
Eco47III AGCGCT 1 cut(s) 262
Eco57I CTGAAG 2 cut(s) 183, 1699
Eco81I CCTNAGG 1 cut(s) 152
EcoRII CCWGG 1 cut(s) 720
EcoT14I CCWWGG 1 cut(s) 373
ErhI CCWWGG 1 cut(s) 373
FaeI CATG 9 cut(s) 356, 481, 673, 991, 1175, 1357, 1510, 1564, 1768
FatI CATG 9 cut(s) 352, 477, 669, 987, 1171, 1353, 1506, 1560, 1764
FauNDI CATATG 2 cut(s) 561, 1696
FbaI TGATCA 1 cut(s) 1912
Fnu4HI GCNGC 3 cut(s) 61, 1113, 1382
FokI GGATG 4 cut(s) 88, 886, 1565, 1581
Fsp4HI GCNGC 3 cut(s) 61, 1113, 1382
FspBI CTAG 3 cut(s) 513, 657, 752
GlaI GCGC 4 cut(s) 108, 164, 262, 878
GluI GCNGC 3 cut(s) 61, 1113, 1382
GsuI CTGGAG 1 cut(s) 1751
HaeII RGCGCY 1 cut(s) 264
HaeIII GGCC 5 cut(s) 63, 186, 378, 522, 1905
HapII CCGG 1 cut(s) 1843
HhaI GCGC 4 cut(s) 109, 165, 263, 879
Hin1II CATG 9 cut(s) 356, 481, 673, 991, 1175, 1357, 1510, 1564, 1768
Hin6I GCGC 4 cut(s) 107, 163, 261, 877
HinP1I GCGC 4 cut(s) 107, 163, 261, 877
HincII GTYRAC 2 cut(s) 1692, 1740
HindII GTYRAC 2 cut(s) 1692, 1740
HindIII AAGCTT 1 cut(s) 1335
HinfI GANTC 4 cut(s) 78, 693, 818, 1719
HpaI GTTAAC 1 cut(s) 1740
HpaII CCGG 1 cut(s) 1843
HphI GGTGA 5 cut(s) 740, 1369, 1415, 1568, 1589
Hpy166II GTNNAC 6 cut(s) 578, 642, 1360, 1453, 1692, 1740
Hpy188III TCNNGA 8 cut(s) 154, 335, 697, 1218, 1433, 1481, 1781, 1801
Hpy8I GTNNAC 6 cut(s) 578, 642, 1360, 1453, 1692, 1740
HpyCH4III ACNGT 4 cut(s) 85, 707, 844, 1264
HpyCH4IV ACGT 2 cut(s) 1704, 1819
HpyF10VI GCNNNNNNNGC 2 cut(s) 935, 1902
HpyF3I CTNAG 7 cut(s) 152, 391, 628, 816, 1000, 1034, 1256
HpySE526I ACGT 2 cut(s) 1704, 1819
Hsp92II CATG 9 cut(s) 356, 481, 673, 991, 1175, 1357, 1510, 1564, 1768
HspAI GCGC 4 cut(s) 107, 163, 261, 877
KpnI GGTACC 2 cut(s) 432, 926
Ksp22I TGATCA 1 cut(s) 1912
KspAI GTTAAC 1 cut(s) 1740
LguI GCTCTTC 1 cut(s) 1645
LmnI GCTCC 2 cut(s) 292, 1851
Lsp1109I GCAGC 2 cut(s) 1124, 1368
LweI GCATC 4 cut(s) 864, 925, 1317, 1597
MaeI CTAG 3 cut(s) 513, 657, 752
MaeII ACGT 2 cut(s) 1704, 1819
MaeIII GTNAC 5 cut(s) 79, 728, 788, 1403, 1556
MflI RGATCY 2 cut(s) 1081, 1435
MhlI GDGCHC 1 cut(s) 1480
MlsI TGGCCA 1 cut(s) 378
MluNI TGGCCA 1 cut(s) 378
MlyI GAGTC 2 cut(s) 87, 827
MmeI TCCRAC 2 cut(s) 314, 880
Mox20I TGGCCA 1 cut(s) 378
MroXI GAANNNNTTC 2 cut(s) 569, 1328
MscI TGGCCA 1 cut(s) 378
MseI TTAA 5 cut(s) 756, 1089, 1529, 1739, 1770
Msp20I TGGCCA 1 cut(s) 378
MspI CCGG 1 cut(s) 1843
MspR9I CCNGG 2 cut(s) 722, 1843
MvaI CCWGG 1 cut(s) 722
MvnI CGCG 2 cut(s) 107, 879
MwoI GCNNNNNNNGC 2 cut(s) 935, 1902
NciI CCSGG 1 cut(s) 1843
NdeI CATATG 2 cut(s) 561, 1696
NlaIII CATG 9 cut(s) 356, 481, 673, 991, 1175, 1357, 1510, 1564, 1768
NlaIV GGNNCC 8 cut(s) 430, 502, 924, 1144, 1271, 1660, 1681, 1847
NmeAIII GCCGAG 1 cut(s) 1560
NmuCI GTSAC 5 cut(s) 79, 728, 788, 1403, 1556
NspI RCATGY 3 cut(s) 673, 1510, 1768
PciI ACATGT 1 cut(s) 1764
PciSI GCTCTTC 1 cut(s) 1645
PcsI WCGNNNNNNNCGW 1 cut(s) 1368
PdmI GAANNNNTTC 2 cut(s) 569, 1328
PfeI GAWTC 2 cut(s) 693, 1719
PkrI GCNGC 3 cut(s) 62, 1114, 1383
PleI GAGTC 2 cut(s) 86, 826
PpsI GAGTC 2 cut(s) 86, 826
PscI ACATGT 1 cut(s) 1764
PsiI TTATAA 1 cut(s) 485
Psp6I CCWGG 1 cut(s) 720
PspGI CCWGG 1 cut(s) 720
PspN4I GGNNCC 8 cut(s) 430, 502, 924, 1144, 1271, 1660, 1681, 1847
PspPI GGNCC 7 cut(s) 8, 91, 520, 578, 1143, 1783, 1903
PstI CTGCAG 2 cut(s) 1114, 1425
PsuI RGATCY 2 cut(s) 1081, 1435
RsaI GTAC 7 cut(s) 412, 430, 763, 924, 1012, 1200, 1670
RsaNI GTAC 7 cut(s) 411, 429, 762, 923, 1011, 1199, 1669
SapI GCTCTTC 1 cut(s) 1645
SaqAI TTAA 5 cut(s) 756, 1089, 1529, 1739, 1770
SatI GCNGC 3 cut(s) 61, 1113, 1382
Sau96I GGNCC 7 cut(s) 8, 91, 520, 578, 1143, 1783, 1903
ScaI AGTACT 1 cut(s) 1200
SchI GAGTC 2 cut(s) 87, 827
ScrFI CCNGG 2 cut(s) 722, 1843
SduI GDGCHC 1 cut(s) 1480
SfaNI GCATC 4 cut(s) 864, 925, 1317, 1597
SfcI CTRYAG 2 cut(s) 1110, 1421
SinI GGWCC 5 cut(s) 8, 91, 578, 1143, 1783
SmlI CTYRAG 1 cut(s) 142
SmoI CTYRAG 1 cut(s) 142
SsiI CCGC 8 cut(s) 60, 105, 220, 498, 879, 1296, 1683, 1753
SspMI CTAG 3 cut(s) 513, 657, 752
StyD4I CCNGG 2 cut(s) 720, 1841
StyI CCWWGG 1 cut(s) 373
TaaI ACNGT 4 cut(s) 85, 707, 844, 1264
TaiI ACGT 2 cut(s) 1707, 1822
TaqI TCGA 9 cut(s) 461, 543, 674, 698, 1164, 1311, 1371, 1411, 1464
TaqII GACCGA 1 cut(s) 595
TatI WGTACW 3 cut(s) 761, 1010, 1198
TauI GCSGC 1 cut(s) 63
TfiI GAWTC 2 cut(s) 693, 1719
Tru1I TTAA 5 cut(s) 756, 1089, 1529, 1739, 1770
Tru9I TTAA 5 cut(s) 756, 1089, 1529, 1739, 1770
TscAI CASTG 5 cut(s) 580, 793, 1197, 1681, 1692
TseFI GTSAC 5 cut(s) 79, 728, 788, 1403, 1556
TseI GCWGC 2 cut(s) 1112, 1381
Tsp45I GTSAC 5 cut(s) 79, 728, 788, 1403, 1556
TspDTI ATGAA 5 cut(s) 578, 1188, 1225, 1342, 1508
TspGWI ACGGA 3 cut(s) 1092, 1377, 1898
TspRI CASTG 5 cut(s) 580, 793, 1197, 1681, 1692
VpaK11BI GGWCC 5 cut(s) 8, 91, 578, 1143, 1783
XapI RAATTY 4 cut(s) 20, 42, 676, 774
XceI RCATGY 3 cut(s) 673, 1510, 1768
XmnI GAANNNNTTC 2 cut(s) 569, 1328
XspI CTAG 3 cut(s) 513, 657, 752
ZrmI AGTACT 1 cut(s) 1200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.