RchiOBHm_Chr1g0336031
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
27778065 .. 27780436
2372 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56406

Sequence Viewer

Length: 2019 bp
ATGGGGGGAGCTTTGGTTATGAAATTGGTTTTGATATACTCATTAGTTTTAAATTCCATGTCCATTTTCTATTGTAGCTCCATGCAATTGAACCATCCGAGACTCGAAGGGAATGAGATGGATAGGCTGGCACTGCTAGCAATCAAAGCTCAGATACAACACGATCCGAATCGGGTCACAAGCTCATGGAATGAAACCCTTCACTTTTGCCTGTGGCATGGCGTCACCTGCAGTCGACGACATCGCCGTTCAACAATTTTAACAGGAGAGATCCCACCTTCTTTGGGGAACCTTTCGTCTCTCGAGAGATTTGATGCTACTCAGAATAATTTTGAAGGAAGCATCCCTAGTTCTCTATGCCAGTTGAAAAAATTAACTGTCTTCTATTTCGGGATAAATAGGTTGTCTAGTATCATCCCTTCATGTATTTATAACCTCTCTAGTATAGTTGAATTCAAGGTATCACAAAACCAATTTCAAGGAAGTCTTCCATCAAACTTGAGCAATGCTTTTCCTAATCTTCAATTCTTTTCCGTTGCCGAAAATCAATTTATTGGGGCCATCCCTTGGTCAATATCCAATGCAACAAATCTTGTGTGGTTTCAATGTTCATCAAACAAACTCACTGGACAAGTGCCTAATTTACAAAATCTTCATAACCTTATGATATTTAGTGTCTATGATAATAATCTTGGAAGCGGTAAACATGGTGACTTGAGTTTTGTCTTAGAATTGATCAATGCCAAACAGCTTACTTTGTTGGACTTCGGCCGGAACAATTTTGGAGGGACATTGCCCAAATCAATATCCAATCTCTCAACCAATCTCCAACTATTCATGGTTGATGAAAACCAACTACATGGAAGCATCCCAACTGGATTAGGGAATTTTGTCAACCTGCAAGTACTCGCTATGGAAAGAAACTCCTTCACAGGTAACATCCCCACTAACATTGGGAAGGTTTCAGGGCTTGGGGAGTTGTTTCTTAACAACAACCAATTATCAAGGAGCATTCCATCATCTCTTGGAAATTTAACATTGTTAACACTTTTGGTATTGGATGAAAATAATCTAGAGGGTAGCATTATCCCTTCCGGCCTATGGAATTACCGTTACTTGCTAGGACTGGATCTTTCTAGAAACAATCTAAATGGCACGATACCTACTCAAGTTTTTGGCCTTTCATCTGTATCAAGATATTTGAGATTGGATAGAAACTATTTCACTGGTTCCCTTCCCATGGAGATTGGAAATTTAAAGAATCTAGGTATACTAGACATTTCTAACAACTTGTTATCAGGACAACTTCCCAGTAGCCTTGGCAGTTGCGAGAGCTTAGAAGAACTATACTTGCAAGGAAACTTCTTCTTGGGACCCATTCCTTCATCTATGAAGGAATTGAGAGGGATTCGAGATTTAGACCTTTCTCGTAACAATTTGTCAGGAGATATTCCACAATTTCTTGAGAATCTAAACTTGGAGTACCTGAACCTCTCCTTCAACCAATTTTGGGGAGCAGTACCAACTAGCGGTGTTTTTAAGAATGCAAGTGCGACTACAGTTGCTGGAAATGCTAAACTTTGTGGAGGTATGGCTAGTCTTCGACCTCCTAATGAAACTGATGATCTCTTTAGTCTCAGGGTCCACTCTTTTGGGACTGGTTATGTGCTGTCTCTTTTACTTCTTGGTAAGAAAAGGAAAGAAACTAATTTAAGCACTTTGGGGAACTCTGTTTTGCAAGTTTCATATGCGACACTCCTCAAAGCTACCGAGGGTTTTTCTTCAGCTAATTTGATCGGTGTGGGTGCTTTTGGGTCTGTGTACAAAGGAATCCTTGCTGATGATAGAGTTGTTGTCGCTGTGAAGGTGCTTAACATGTTACACAGGGGAGTAGCTAAGAGTTTCATGGCCAAATATGAGGCATTCAGAAATATCAGACATAGAAATTTGGTCAAGATCTTAACTACATGTTCAAATATTGATTTTGGCGGCAATGATTTCAAGGCTCTTGTTTACTAG

Protein Analysis

672

Amino Acids

73.9

Weight (kDa)

8.82

Isoelectric Point (pI)

27.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 78 2.4e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 367 - 498 2.9e-10 Leucine-rich repeat region
Pkinase PF00069 595 - 659 8.2e-06 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 597 - 658 1.5e-07 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 432
AarI CACCTGC 1 cut(s) 236
Acc36I ACCTGC 2 cut(s) 236, 906
AccB7I CCANNNNNTGG 1 cut(s) 567
AccI GTMKAC 2 cut(s) 235, 1270
AciI CCGC 3 cut(s) 699, 1530, 1989
AclWI GGATC 3 cut(s) 158, 265, 1137
AcoI YGGCCR 2 cut(s) 769, 1908
AcsI RAATTY 6 cut(s) 52, 452, 886, 1030, 1252, 1945
AcuI CTGAAG 1 cut(s) 1767
AcyI GRCGYC 1 cut(s) 222
AfaI GTAC 4 cut(s) 906, 1484, 1521, 1823
AfiI CCNNNNNNNGG 6 cut(s) 284, 567, 1101, 1240, 1510, 1529
AflIII ACRYGT 2 cut(s) 1875, 1967
AjuI GAANNNNNNNTTGG 2 cut(s) 1460, 1492
AluBI AGCT 9 cut(s) 11, 78, 149, 183, 751, 1335, 1766, 1787, 1895
AluI AGCT 9 cut(s) 11, 78, 149, 183, 751, 1335, 1766, 1787, 1895
Alw26I GTCTC 4 cut(s) 94, 303, 1640, 1677
AlwI GGATC 3 cut(s) 158, 265, 1137
AlwNI CAGNNNCTG 1 cut(s) 1565
Ama87I CYCGRG 1 cut(s) 302
AoxI GGCC 5 cut(s) 558, 769, 1096, 1177, 1908
ApoI RAATTY 6 cut(s) 52, 452, 886, 1030, 1252, 1945
ArsI GACNNNNNNTTYG 2 cut(s) 704, 736
Asp700I GAANNNNTTC 1 cut(s) 198
AspS9I GGNCC 3 cut(s) 558, 1373, 1642
AsuHPI GGTGA 2 cut(s) 217, 722
AsuNHI GCTAGC 1 cut(s) 136
AvaI CYCGRG 1 cut(s) 302
AvaII GGWCC 2 cut(s) 1373, 1642
BalI TGGCCA 1 cut(s) 1910
BarI GAAGNNNNNNTAC 2 cut(s) 403, 435
BbsI GAAGAC 3 cut(s) 373, 479, 1592
BccI CCATC 5 cut(s) 102, 112, 499, 569, 1024
BceAI ACGGC 1 cut(s) 231
BclI TGATCA 1 cut(s) 735
BcoDI GTCTC 4 cut(s) 94, 303, 1640, 1677
BfmI CTRYAG 2 cut(s) 229, 1557
BfuAI ACCTGC 2 cut(s) 236, 906
BglII AGATCT 1 cut(s) 1956
BisI GCNGC 1 cut(s) 1990
BlsI GCNGC 1 cut(s) 1991
BmcAI AGTACT 1 cut(s) 906
Bme18I GGWCC 2 cut(s) 1373, 1642
BmeT110I CYCGRG 1 cut(s) 302
BmgT120I GGNCC 3 cut(s) 558, 1373, 1642
BmiI GGNNCC 6 cut(s) 290, 559, 1231, 1374, 1375, 1643
BmrI ACTGGG 1 cut(s) 1305
BmsI GCATC 3 cut(s) 304, 351, 876
BmtI GCTAGC 1 cut(s) 140
BmuI ACTGGG 1 cut(s) 1305
BpiI GAAGAC 3 cut(s) 373, 479, 1592
BpuEI CTTGAG 4 cut(s) 520, 736, 1152, 1484
BsaBI GATNNNNATC 2 cut(s) 168, 687
BsaHI GRCGYC 1 cut(s) 222
BsaJI CCNNGG 4 cut(s) 566, 1239, 1318, 1770
BsaXI ACNNNNNCTCC 1 cut(s) 30
Bsc4I CCNNNNNNNGG 6 cut(s) 284, 567, 1101, 1240, 1510, 1529
Bse1I ACTGG 7 cut(s) 361, 631, 880, 1131, 1231, 1311, 1663
Bse3DI GCAATG 3 cut(s) 511, 791, 1999
Bse8I GATNNNNATC 2 cut(s) 168, 687
BseDI CCNNGG 4 cut(s) 566, 1239, 1318, 1770
BseGI GGATG 7 cut(s) 94, 342, 414, 561, 867, 939, 1066
BseJI GATNNNNATC 2 cut(s) 168, 687
BseLI CCNNNNNNNGG 6 cut(s) 284, 567, 1101, 1240, 1510, 1529
BseMI GCAATG 3 cut(s) 511, 791, 1999
BseMII CTCAG 3 cut(s) 164, 335, 1651
BseNI ACTGG 7 cut(s) 361, 631, 880, 1131, 1231, 1311, 1663
BseRI GAGGAG 1 cut(s) 1748
BseX3I CGGCCG 1 cut(s) 769
Bsh1285I CGRYCG 1 cut(s) 772
BshFI GGCC 5 cut(s) 560, 771, 1098, 1179, 1910
BsiEI CGRYCG 1 cut(s) 772
BsiHKCI CYCGRG 1 cut(s) 302
BsiSI CCGG 2 cut(s) 772, 1095
BslFI GGGAC 3 cut(s) 802, 1386, 1669
BslI CCNNNNNNNGG 6 cut(s) 284, 567, 1101, 1240, 1510, 1529
BsmAI GTCTC 4 cut(s) 94, 303, 1640, 1677
BsmBI CGTCTC 1 cut(s) 303
BsmFI GGGAC 3 cut(s) 802, 1386, 1669
BsmI GAATGC 3 cut(s) 1011, 1549, 1922
BsnI GGCC 5 cut(s) 560, 771, 1098, 1179, 1910
BsoBI CYCGRG 1 cut(s) 302
Bsp1407I TGTACA 1 cut(s) 1821
Bsp143I GATC 7 cut(s) 163, 270, 735, 1129, 1624, 1794, 1956
Bsp19I CCATGG 1 cut(s) 1239
BspACI CCGC 3 cut(s) 699, 1530, 1989
BspANI GGCC 5 cut(s) 560, 771, 1098, 1179, 1910
BspCNI CTCAG 3 cut(s) 163, 334, 1650
BspLI GGNNCC 6 cut(s) 290, 559, 1231, 1374, 1375, 1643
BspMAI CTGCAG 1 cut(s) 233
BspMI ACCTGC 2 cut(s) 236, 906
BspOI GCTAGC 1 cut(s) 140
BspPI GGATC 3 cut(s) 158, 265, 1137
BsrDI GCAATG 3 cut(s) 511, 791, 1999
BsrGI TGTACA 1 cut(s) 1821
BsrI ACTGG 7 cut(s) 361, 631, 880, 1131, 1231, 1311, 1663
BssECI CCNNGG 4 cut(s) 566, 1239, 1318, 1770
BssMI GATC 7 cut(s) 163, 270, 735, 1129, 1624, 1794, 1956
BssNAI GTATAC 1 cut(s) 1271
BssNI GRCGYC 1 cut(s) 222
BssT1I CCWWGG 3 cut(s) 566, 1239, 1318
Bst1107I GTATAC 1 cut(s) 1271
Bst4CI ACNGT 3 cut(s) 379, 1112, 1561
BstACI GRCGYC 1 cut(s) 222
BstAUI TGTACA 1 cut(s) 1821
BstC8I GCNNGC 2 cut(s) 129, 138
BstDEI CTNAG 6 cut(s) 150, 321, 727, 1336, 1637, 1896
BstDSI CCRYGG 1 cut(s) 1239
BstF5I GGATG 7 cut(s) 94, 342, 414, 561, 867, 939, 1066
BstKTI GATC 7 cut(s) 166, 273, 738, 1132, 1627, 1797, 1959
BstMAI GTCTC 4 cut(s) 94, 303, 1640, 1677
BstMBI GATC 7 cut(s) 163, 270, 735, 1129, 1624, 1794, 1956
BstMCI CGRYCG 1 cut(s) 772
BstMWI GCNNNNNNNGC 5 cut(s) 133, 137, 146, 228, 1571
BstNSI RCATGY 2 cut(s) 1879, 1971
BstSFI CTRYAG 2 cut(s) 229, 1557
BstV2I GAAGAC 3 cut(s) 373, 479, 1592
BstX2I RGATCY 3 cut(s) 270, 1129, 1956
BstXI CCANNNNNNTGG 2 cut(s) 860, 1652
BstYI RGATCY 3 cut(s) 270, 1129, 1956
BstZ17I GTATAC 1 cut(s) 1271
BstZI CGGCCG 1 cut(s) 769
BsuRI GGCC 5 cut(s) 560, 771, 1098, 1179, 1910
BtgI CCRYGG 1 cut(s) 1239
BtgZI GCGATG 1 cut(s) 227
BtsCI GGATG 7 cut(s) 94, 342, 414, 561, 867, 939, 1066
BtsI GCAGTG 1 cut(s) 131
BtsIMutI CAGTG 3 cut(s) 131, 624, 1224
BveI ACCTGC 2 cut(s) 236, 906
Cac8I GCNNGC 2 cut(s) 129, 138
CaiI CAGNNNCTG 1 cut(s) 1565
Cfr13I GGNCC 3 cut(s) 558, 1373, 1642
CseI GACGC 1 cut(s) 211
Csp6I GTAC 4 cut(s) 905, 1483, 1520, 1822
CspCI CAANNNNNGTGG 4 cut(s) 264, 299, 934, 969
CviQI GTAC 4 cut(s) 905, 1483, 1520, 1822
DdeI CTNAG 6 cut(s) 150, 321, 727, 1336, 1637, 1896
DpnI GATC 7 cut(s) 165, 272, 737, 1131, 1626, 1796, 1958
DpnII GATC 7 cut(s) 163, 270, 735, 1129, 1624, 1794, 1956
DraI TTTAAA 2 cut(s) 51, 1257
EaeI YGGCCR 2 cut(s) 769, 1908
EagI CGGCCG 1 cut(s) 769
EclXI CGGCCG 1 cut(s) 769
Eco130I CCWWGG 3 cut(s) 566, 1239, 1318
Eco47I GGWCC 2 cut(s) 1373, 1642
Eco52I CGGCCG 1 cut(s) 769
Eco57I CTGAAG 1 cut(s) 1767
Eco88I CYCGRG 1 cut(s) 302
EcoO109I RGGNCCY 1 cut(s) 1373
EcoRI GAATTC 1 cut(s) 452
EcoT14I CCWWGG 3 cut(s) 566, 1239, 1318
ErhI CCWWGG 3 cut(s) 566, 1239, 1318
Esp3I CGTCTC 1 cut(s) 303
FalI AAGNNNNNCTT 4 cut(s) 471, 503, 1818, 1850
FaqI GGGAC 3 cut(s) 802, 1386, 1669
FauNDI CATATG 1 cut(s) 1747
FbaI TGATCA 1 cut(s) 735
FblI GTMKAC 2 cut(s) 235, 1270
Fnu4HI GCNGC 1 cut(s) 1990
FokI GGATG 7 cut(s) 81, 329, 401, 548, 854, 926, 1073
Fsp4HI GCNGC 1 cut(s) 1990
GluI GCNGC 1 cut(s) 1990
HaeIII GGCC 5 cut(s) 560, 771, 1098, 1179, 1910
HapII CCGG 2 cut(s) 772, 1095
HgaI GACGC 1 cut(s) 211
Hin1I GRCGYC 1 cut(s) 222
HincII GTYRAC 3 cut(s) 236, 895, 1044
HindII GTYRAC 3 cut(s) 236, 895, 1044
HinfI GANTC 6 cut(s) 102, 169, 1261, 1408, 1468, 1830
HpaI GTTAAC 1 cut(s) 1044
HpaII CCGG 2 cut(s) 772, 1095
HphI GGTGA 2 cut(s) 217, 722
Hpy166II GTNNAC 8 cut(s) 236, 704, 895, 1044, 1271, 1645, 1822, 2014
Hpy188I TCNGA 6 cut(s) 99, 153, 168, 324, 1928, 1937
Hpy8I GTNNAC 8 cut(s) 236, 704, 895, 1044, 1271, 1645, 1822, 2014
Hpy99I CGWCG 1 cut(s) 240
HpyCH4III ACNGT 3 cut(s) 379, 1112, 1561
HpyCH4V TGCA 7 cut(s) 85, 231, 584, 901, 1354, 1547, 1738
HpyF10VI GCNNNNNNNGC 5 cut(s) 133, 137, 146, 228, 1571
HpyF3I CTNAG 6 cut(s) 150, 321, 727, 1336, 1637, 1896
Hsp92I GRCGYC 1 cut(s) 222
KflI GGGWCCC 1 cut(s) 1373
Ksp22I TGATCA 1 cut(s) 735
KspAI GTTAAC 1 cut(s) 1044
Kzo9I GATC 7 cut(s) 163, 270, 735, 1129, 1624, 1794, 1956
LmnI GCTCC 4 cut(s) 8, 83, 1008, 1514
LweI GCATC 3 cut(s) 304, 351, 876
MaeIII GTNAC 7 cut(s) 175, 223, 710, 935, 1112, 1430, 1878
MalI GATC 7 cut(s) 165, 272, 737, 1131, 1626, 1796, 1958
MboI GATC 7 cut(s) 163, 270, 735, 1129, 1624, 1794, 1956
MboII GAAGA 8 cut(s) 373, 479, 512, 644, 1352, 1357, 1592, 1773
MfeI CAATTG 1 cut(s) 86
MflI RGATCY 3 cut(s) 270, 1129, 1956
MlsI TGGCCA 1 cut(s) 1910
MluNI TGGCCA 1 cut(s) 1910
MlyI GAGTC 1 cut(s) 96
MmeI TCCRAC 2 cut(s) 741, 853
Mox20I TGGCCA 1 cut(s) 1910
MroXI GAANNNNTTC 1 cut(s) 198
MscI TGGCCA 1 cut(s) 1910
Msp20I TGGCCA 1 cut(s) 1910
MspI CCGG 2 cut(s) 772, 1095
MunI CAATTG 1 cut(s) 86
Mva1269I GAATGC 3 cut(s) 1011, 1549, 1922
MwoI GCNNNNNNNGC 5 cut(s) 133, 137, 146, 228, 1571
NcoI CCATGG 1 cut(s) 1239
NdeI CATATG 1 cut(s) 1747
NdeII GATC 7 cut(s) 163, 270, 735, 1129, 1624, 1794, 1956
NheI GCTAGC 1 cut(s) 136
NlaIV GGNNCC 6 cut(s) 290, 559, 1231, 1374, 1375, 1643
NmuCI GTSAC 3 cut(s) 175, 223, 710
NspI RCATGY 2 cut(s) 1879, 1971
PaeR7I CTCGAG 1 cut(s) 302
PaqCI CACCTGC 1 cut(s) 236
PciI ACATGT 2 cut(s) 1875, 1967
PcsI WCGNNNNNNNCGW 1 cut(s) 244
PctI GAATGC 3 cut(s) 1011, 1549, 1922
PdmI GAANNNNTTC 1 cut(s) 198
PfeI GAWTC 5 cut(s) 169, 1261, 1408, 1468, 1830
PflMI CCANNNNNTGG 1 cut(s) 567
PkrI GCNGC 1 cut(s) 1991
PleI GAGTC 1 cut(s) 96
PpsI GAGTC 1 cut(s) 96
PpuMI RGGWCCY 1 cut(s) 1373
PscI ACATGT 2 cut(s) 1875, 1967
PsiI TTATAA 1 cut(s) 432
Psp5II RGGWCCY 1 cut(s) 1373
PspN4I GGNNCC 6 cut(s) 290, 559, 1231, 1374, 1375, 1643
PspPI GGNCC 3 cut(s) 558, 1373, 1642
PspPPI RGGWCCY 1 cut(s) 1373
PstI CTGCAG 1 cut(s) 233
PstNI CAGNNNCTG 1 cut(s) 1565
PsuI RGATCY 3 cut(s) 270, 1129, 1956
RsaI GTAC 4 cut(s) 906, 1484, 1521, 1823
RsaNI GTAC 4 cut(s) 905, 1483, 1520, 1822
SalI GTCGAC 1 cut(s) 234
SatI GCNGC 1 cut(s) 1990
Sau3AI GATC 7 cut(s) 163, 270, 735, 1129, 1624, 1794, 1956
Sau96I GGNCC 3 cut(s) 558, 1373, 1642
ScaI AGTACT 1 cut(s) 906
SchI GAGTC 1 cut(s) 96
SfaNI GCATC 3 cut(s) 304, 351, 876
SfcI CTRYAG 2 cut(s) 229, 1557
Sfr274I CTCGAG 1 cut(s) 302
SinI GGWCC 2 cut(s) 1373, 1642
SlaI CTCGAG 1 cut(s) 302
SmlI CTYRAG 5 cut(s) 302, 499, 715, 1167, 1463
SmoI CTYRAG 5 cut(s) 302, 499, 715, 1167, 1463
SsiI CCGC 3 cut(s) 699, 1530, 1989
SspI AATATT 1 cut(s) 1978
StyI CCWWGG 3 cut(s) 566, 1239, 1318
TaaI ACNGT 3 cut(s) 379, 1112, 1561
TaqI TCGA 5 cut(s) 105, 235, 303, 1411, 1603
TatI WGTACW 2 cut(s) 904, 1821
TauI GCSGC 1 cut(s) 1992
TfiI GAWTC 5 cut(s) 169, 1261, 1408, 1468, 1830
TscAI CASTG 3 cut(s) 138, 631, 1231
TseFI GTSAC 3 cut(s) 175, 223, 710
Tsp45I GTSAC 3 cut(s) 175, 223, 710
TspGWI ACGGA 1 cut(s) 523
TspRI CASTG 3 cut(s) 138, 631, 1231
Van91I CCANNNNNTGG 1 cut(s) 567
VpaK11BI GGWCC 2 cut(s) 1373, 1642
XapI RAATTY 6 cut(s) 52, 452, 886, 1030, 1252, 1945
XbaI TCTAGA 2 cut(s) 1072, 1136
XceI RCATGY 2 cut(s) 1879, 1971
XhoI CTCGAG 1 cut(s) 302
XmiI GTMKAC 2 cut(s) 235, 1270
XmnI GAANNNNTTC 1 cut(s) 198
ZrmI AGTACT 1 cut(s) 906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.