MD01G1151000.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
25925543 .. 25927030
1488 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1151000.v1.1.491

Sequence Viewer

Length: 1407 bp
ATGTATAAACAGTATCTGGTCCTTGACTCGAGCTTTACTTCGCAGAGCGCATACATGGGGTTCTCCAGTATCATTAACATTATCTGGTCAATTCTTATGCAACTGTTTCTCCTGATGAGTACTTCATCCTCCTTACATCTAGGAGGGAATGAAACGGATAGACAGTCCTTGCTTGTATTTAAAGCTAAAATCGTGAATGATCCACTGGGCATTCTTAGCTCCTGGAATGAATCCCTCCACTTCTGTCAGTGGCAAGGTATTGTTTGTGGCCGTAGGCACCAGAGAGTCACCGTGCTGGATCTCCAATCAAGCCGGCTGTACGGTCAGCTATCTCCCCACATTGGAAACTTGAGCTTTCTCAGAAATTTAAACCTCCAAAACAACAGCTTCAACAACATCATCCCTCAAGAAATTAGCCGTTTGTTCCAACAACTACTCCTTGAAAACAACTCATTCAGTGGTGATATTCCATTCAACTTATCACGTTGCTCTAACCTCCAAATACTTCGCATAGCTAGAAACCATCTTGTGGGTAAAATTCCAATTGAAATTGGTTCCTTGTCCAAGCTTCAGGTACTTAAATTAACCAAAACCAATTTAAGTGGGGAAATCCCAGCTTCTTTGGGAAATCTTTCTTTTCTCCAGGTGTTAGATGTGAAAGAAAATAATCTGCGTGGAGGCATTCCGAATAGCCTTGGCCAGTTGAAAAGACTAACATATCTTTCATTGGGTGAAAATTATTTGAATGGTACCATCCCTCCCTGCATATACAACCTCTCATCAATTACACTCATTTCTGTGCTTCTAAACGAACTGCATGGAACTCTTCCTCCTGGGTTGGGCCACACTATATTTCCAAACCTCCAACAATTTTATTTCCGGTCCAACCAATTCAGTGGATCGATACCAAATTCAATCTCCAATGCCTCAAACCTTTCACATTTTGAAATCTCAATCACTGAGTTTACTGGAAAAGTGCCTAGTCTAGCACGCCTGTCAAATTTGTATTTGTTAGGACTTGCCGATAACAATCTTGGAAATGATGAGGAAGGTGACTTGGATTTCATCTCTTCCCTAGTTAATTGCACCAAATTAACACTGTTTGATGTTCGTGGCAATAATTTTGGAGGAGTGCTACCTGAATCCATCAGCAATCTCTCAACAGAGCTCAATCAAATGGTAATTGGTCGTAACCGGATACGCGGAAGAATTCCCATTGGGATCGGAAATCTAATCAATTTAGAGGTAGTAGCCTCTGAGGGAAATCTACTGACAGGCACAATACCAAGTTCTATTGGTAAACTAAAAAGGTTGGACTCTCTGGATCTGAAGGAGAATAAACTATCAGGTACCATCCCATCTTCTATTGGAAATCTAACTTCATTAACCAGGTTGATTCTCGAGTGA

Protein Analysis

469

Amino Acids

51.6

Weight (kDa)

8.74

Isoelectric Point (pI)

40.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 51 - 89 2.7e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 94 - 197 2.2e-06 Leucine-rich repeat region
LRR_14 PF23598 158 - 267 5.2e-13 Leucine-rich repeat region
LRR_8 PF13855 189 - 248 8.1e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 749, 1349
AccB1I GGYRCC 3 cut(s) 276, 749, 1349
AccB7I CCANNNNNTGG 1 cut(s) 529
AccII CGCG 1 cut(s) 1203
AciI CCGC 1 cut(s) 1203
AclWI GGATC 5 cut(s) 194, 306, 907, 1229, 1332
AcoI YGGCCR 2 cut(s) 268, 697
AcsI RAATTY 5 cut(s) 364, 537, 910, 1000, 1209
AcuI CTGAAG 2 cut(s) 554, 1349
AfaI GTAC 5 cut(s) 121, 320, 576, 751, 1351
AfiI CCNNNNNNNGG 3 cut(s) 341, 529, 839
AgsI TTSAA 8 cut(s) 391, 443, 475, 548, 706, 745, 915, 947
AjnI CCWGG 4 cut(s) 221, 642, 832, 1388
AloI GAACNNNNNNTCC 2 cut(s) 814, 846
Alw21I GWGCWC 1 cut(s) 1170
AlwI GGATC 5 cut(s) 194, 306, 907, 1229, 1332
AlwNI CAGNNNCTG 1 cut(s) 16
Ama87I CYCGRG 2 cut(s) 28, 1400
AoxI GGCC 3 cut(s) 268, 697, 841
ApoI RAATTY 5 cut(s) 364, 537, 910, 1000, 1209
Asp700I GAANNNNTTC 1 cut(s) 631
Asp718I GGTACC 2 cut(s) 749, 1349
AspLEI GCGC 1 cut(s) 50
AspS9I GGNCC 3 cut(s) 19, 841, 882
AsuHPI GGTGA 4 cut(s) 280, 473, 743, 1064
AvaI CYCGRG 2 cut(s) 28, 1400
AvaII GGWCC 2 cut(s) 19, 882
BalI TGGCCA 1 cut(s) 699
BanI GGYRCC 3 cut(s) 276, 749, 1349
BanII GRGCYC 1 cut(s) 1170
Bbv12I GWGCWC 1 cut(s) 1170
BccI CCATC 5 cut(s) 531, 761, 1154, 1361, 1366
BceAI ACGGC 2 cut(s) 255, 402
BciT130I CCWGG 4 cut(s) 223, 644, 834, 1390
BciVI GTATCC 1 cut(s) 1191
BfaI CTAG 5 cut(s) 140, 516, 981, 986, 1076
BfuI GTATCC 1 cut(s) 1191
BmcAI AGTACT 1 cut(s) 121
Bme1390I CCNGG 4 cut(s) 223, 644, 834, 1390
Bme18I GGWCC 2 cut(s) 19, 882
BmeT110I CYCGRG 2 cut(s) 28, 1400
BmgT120I GGNCC 3 cut(s) 19, 841, 882
BmiI GGNNCC 4 cut(s) 278, 556, 751, 1351
BmrFI CCNGG 4 cut(s) 223, 644, 834, 1390
BmrI ACTGGG 1 cut(s) 215
BmuI ACTGGG 1 cut(s) 215
BpmI CTGGAG 2 cut(s) 49, 626
BpuEI CTTGAG 2 cut(s) 370, 390
Bsa29I ATCGAT 1 cut(s) 902
BsaBI GATNNNNATC 1 cut(s) 1029
BsaJI CCNNGG 2 cut(s) 694, 833
BsaWI WCCGGW 2 cut(s) 879, 1194
BsaXI ACNNNNNCTCC 8 cut(s) 93, 123, 420, 450, 742, 772, 814, 844
Bsc4I CCNNNNNNNGG 3 cut(s) 341, 529, 839
Bse118I RCCGGY 1 cut(s) 312
Bse1I ACTGG 4 cut(s) 66, 210, 700, 973
Bse8I GATNNNNATC 1 cut(s) 1029
BseBI CCWGG 4 cut(s) 223, 644, 834, 1390
BseCI ATCGAT 1 cut(s) 902
BseDI CCNNGG 2 cut(s) 694, 833
BseGI GGATG 4 cut(s) 125, 399, 753, 1353
BseJI GATNNNNATC 1 cut(s) 1029
BseLI CCNNNNNNNGG 3 cut(s) 341, 529, 839
BseMII CTCAG 3 cut(s) 373, 951, 1248
BseNI ACTGG 4 cut(s) 66, 210, 700, 973
BseRI GAGGAG 1 cut(s) 1143
BseYI CCCAGC 1 cut(s) 613
Bsh1236I CGCG 1 cut(s) 1203
BshFI GGCC 3 cut(s) 270, 699, 843
BshNI GGYRCC 3 cut(s) 276, 749, 1349
BshVI ATCGAT 1 cut(s) 902
BsiHKAI GWGCWC 1 cut(s) 1170
BsiHKCI CYCGRG 2 cut(s) 28, 1400
BsiSI CCGG 3 cut(s) 313, 880, 1195
BslI CCNNNNNNNGG 3 cut(s) 341, 529, 839
BsmI GAATGC 2 cut(s) 210, 681
BsnI GGCC 3 cut(s) 270, 699, 843
BsoBI CYCGRG 2 cut(s) 28, 1400
Bsp1286I GDGCHC 1 cut(s) 1170
Bsp143I GATC 5 cut(s) 199, 298, 899, 1221, 1324
BspACI CCGC 1 cut(s) 1203
BspANI GGCC 3 cut(s) 270, 699, 843
BspCNI CTCAG 3 cut(s) 372, 952, 1249
BspDI ATCGAT 1 cut(s) 902
BspFNI CGCG 1 cut(s) 1203
BspLI GGNNCC 4 cut(s) 278, 556, 751, 1351
BspPI GGATC 5 cut(s) 194, 306, 907, 1229, 1332
BspT107I GGYRCC 3 cut(s) 276, 749, 1349
BsrFI RCCGGY 1 cut(s) 312
BsrI ACTGG 4 cut(s) 66, 210, 700, 973
BssAI RCCGGY 1 cut(s) 312
BssECI CCNNGG 2 cut(s) 694, 833
BssMI GATC 5 cut(s) 199, 298, 899, 1221, 1324
BssT1I CCWWGG 1 cut(s) 694
Bst2UI CCWGG 4 cut(s) 223, 644, 834, 1390
Bst4CI ACNGT 6 cut(s) 12, 105, 165, 292, 323, 1101
Bst6I CTCTTC 2 cut(s) 831, 1075
BstC8I GCNNGC 2 cut(s) 314, 991
BstDEI CTNAG 4 cut(s) 215, 359, 960, 1257
BstF5I GGATG 4 cut(s) 125, 399, 753, 1353
BstFNI CGCG 1 cut(s) 1203
BstHHI GCGC 1 cut(s) 50
BstKTI GATC 5 cut(s) 202, 301, 902, 1224, 1327
BstMBI GATC 5 cut(s) 199, 298, 899, 1221, 1324
BstMWI GCNNNNNNNGC 1 cut(s) 216
BstNI CCWGG 4 cut(s) 223, 644, 834, 1390
BstSCI CCNGG 4 cut(s) 221, 642, 832, 1388
BstUI CGCG 1 cut(s) 1203
BstX2I RGATCY 2 cut(s) 298, 1324
BstXI CCANNNNNNTGG 1 cut(s) 896
BstYI RGATCY 2 cut(s) 298, 1324
Bsu15I ATCGAT 1 cut(s) 902
BsuI GTATCC 1 cut(s) 1191
BsuRI GGCC 3 cut(s) 270, 699, 843
BsuTUI ATCGAT 1 cut(s) 902
BtsCI GGATG 4 cut(s) 125, 399, 753, 1353
BtsIMutI CAGTG 6 cut(s) 203, 254, 463, 901, 957, 1097
Cac8I GCNNGC 2 cut(s) 314, 991
CaiI CAGNNNCTG 1 cut(s) 16
CfoI GCGC 1 cut(s) 50
Cfr10I RCCGGY 1 cut(s) 312
Cfr13I GGNCC 3 cut(s) 19, 841, 882
ClaI ATCGAT 1 cut(s) 902
CsiI ACCWGGT 1 cut(s) 1388
Csp6I GTAC 5 cut(s) 120, 319, 575, 750, 1350
CspCI CAANNNNNGTGG 2 cut(s) 583, 618
CviAII CATG 2 cut(s) 55, 818
CviQI GTAC 5 cut(s) 120, 319, 575, 750, 1350
DdeI CTNAG 4 cut(s) 215, 359, 960, 1257
DpnI GATC 5 cut(s) 201, 300, 901, 1223, 1326
DpnII GATC 5 cut(s) 199, 298, 899, 1221, 1324
DraI TTTAAA 2 cut(s) 181, 369
EaeI YGGCCR 2 cut(s) 268, 697
Eam1104I CTCTTC 2 cut(s) 831, 1075
EarI CTCTTC 2 cut(s) 831, 1075
Ecl136II GAGCTC 1 cut(s) 1168
Eco130I CCWWGG 1 cut(s) 694
Eco24I GRGCYC 1 cut(s) 1170
Eco47I GGWCC 2 cut(s) 19, 882
Eco53kI GAGCTC 1 cut(s) 1168
Eco57I CTGAAG 2 cut(s) 554, 1349
Eco88I CYCGRG 2 cut(s) 28, 1400
EcoICRI GAGCTC 1 cut(s) 1168
EcoRI GAATTC 1 cut(s) 1209
EcoRII CCWGG 4 cut(s) 221, 642, 832, 1388
EcoT14I CCWWGG 1 cut(s) 694
EcoT38I GRGCYC 1 cut(s) 1170
ErhI CCWWGG 1 cut(s) 694
FaeI CATG 2 cut(s) 58, 821
FatI CATG 2 cut(s) 54, 817
FokI GGATG 4 cut(s) 112, 386, 740, 1340
FriOI GRGCYC 1 cut(s) 1170
FspBI CTAG 5 cut(s) 140, 516, 981, 986, 1076
GlaI GCGC 1 cut(s) 49
GsaI CCCAGC 1 cut(s) 617
GsuI CTGGAG 2 cut(s) 49, 626
HaeIII GGCC 3 cut(s) 270, 699, 843
HapII CCGG 3 cut(s) 313, 880, 1195
HhaI GCGC 1 cut(s) 50
Hin1II CATG 2 cut(s) 58, 821
Hin6I GCGC 1 cut(s) 48
HinP1I GCGC 1 cut(s) 48
HindIII AAGCTT 1 cut(s) 566
HinfI GANTC 6 cut(s) 26, 230, 285, 1142, 1316, 1396
HpaII CCGG 3 cut(s) 313, 880, 1195
HphI GGTGA 4 cut(s) 280, 473, 743, 1064
Hpy166II GTNNAC 2 cut(s) 966, 1301
Hpy188I TCNGA 5 cut(s) 362, 687, 1226, 1258, 1329
Hpy188III TCNNGA 5 cut(s) 112, 193, 407, 1322, 1400
Hpy8I GTNNAC 2 cut(s) 966, 1301
HpyAV CCTTC 2 cut(s) 1043, 1324
HpyCH4III ACNGT 6 cut(s) 12, 105, 165, 292, 323, 1101
HpyCH4IV ACGT 1 cut(s) 484
HpyCH4V TGCA 4 cut(s) 100, 765, 817, 1086
HpyF10VI GCNNNNNNNGC 1 cut(s) 216
HpyF3I CTNAG 4 cut(s) 215, 359, 960, 1257
HpySE526I ACGT 1 cut(s) 484
Hsp92II CATG 2 cut(s) 58, 821
HspAI GCGC 1 cut(s) 48
KpnI GGTACC 2 cut(s) 753, 1353
KroI GCCGGC 1 cut(s) 312
KroNI GCCGGC 1 cut(s) 314
Kzo9I GATC 5 cut(s) 199, 298, 899, 1221, 1324
LmnI GCTCC 1 cut(s) 224
MabI ACCWGGT 1 cut(s) 1388
MaeI CTAG 5 cut(s) 140, 516, 981, 986, 1076
MaeII ACGT 1 cut(s) 484
MaeIII GTNAC 3 cut(s) 286, 1052, 1190
MalI GATC 5 cut(s) 201, 300, 901, 1223, 1326
MboI GATC 5 cut(s) 199, 298, 899, 1221, 1324
MboII GAAGA 4 cut(s) 818, 1062, 1218, 1353
MfeI CAATTG 1 cut(s) 543
MflI RGATCY 2 cut(s) 298, 1324
MhlI GDGCHC 1 cut(s) 1170
MlsI TGGCCA 1 cut(s) 699
MluNI TGGCCA 1 cut(s) 699
MlyI GAGTC 3 cut(s) 20, 294, 1310
MmeI TCCRAC 4 cut(s) 451, 889, 909, 1293
Mox20I TGGCCA 1 cut(s) 699
MroNI GCCGGC 1 cut(s) 312
MroXI GAANNNNTTC 1 cut(s) 631
MscI TGGCCA 1 cut(s) 699
MseI TTAA 9 cut(s) 75, 180, 368, 579, 584, 599, 1080, 1094, 1385
MslI CAYNNNNRTG 1 cut(s) 797
Msp20I TGGCCA 1 cut(s) 699
MspI CCGG 3 cut(s) 313, 880, 1195
MspR9I CCNGG 4 cut(s) 223, 644, 834, 1390
MunI CAATTG 1 cut(s) 543
Mva1269I GAATGC 2 cut(s) 210, 681
MvaI CCWGG 4 cut(s) 223, 644, 834, 1390
MvnI CGCG 1 cut(s) 1203
MwoI GCNNNNNNNGC 1 cut(s) 216
NaeI GCCGGC 1 cut(s) 314
NdeII GATC 5 cut(s) 199, 298, 899, 1221, 1324
NgoMIV GCCGGC 1 cut(s) 312
NlaIII CATG 2 cut(s) 58, 821
NlaIV GGNNCC 4 cut(s) 278, 556, 751, 1351
NmuCI GTSAC 2 cut(s) 286, 1052
PaeR7I CTCGAG 2 cut(s) 28, 1400
PctI GAATGC 2 cut(s) 210, 681
PdiI GCCGGC 1 cut(s) 314
PdmI GAANNNNTTC 1 cut(s) 631
PfeI GAWTC 3 cut(s) 230, 1142, 1396
PflMI CCANNNNNTGG 1 cut(s) 529
PfoI TCCNGGA 1 cut(s) 221
PleI GAGTC 3 cut(s) 20, 293, 1310
PpsI GAGTC 3 cut(s) 20, 293, 1310
Psp124BI GAGCTC 1 cut(s) 1170
Psp6I CCWGG 4 cut(s) 221, 642, 832, 1388
PspFI CCCAGC 1 cut(s) 613
PspGI CCWGG 4 cut(s) 221, 642, 832, 1388
PspN4I GGNNCC 4 cut(s) 278, 556, 751, 1351
PspPI GGNCC 3 cut(s) 19, 841, 882
PspXI VCTCGAGB 1 cut(s) 28
PstNI CAGNNNCTG 1 cut(s) 16
PsuI RGATCY 2 cut(s) 298, 1324
RsaI GTAC 5 cut(s) 121, 320, 576, 751, 1351
RsaNI GTAC 5 cut(s) 120, 319, 575, 750, 1350
RseI CAYNNNNRTG 1 cut(s) 797
SacI GAGCTC 1 cut(s) 1170
SaqAI TTAA 9 cut(s) 75, 180, 368, 579, 584, 599, 1080, 1094, 1385
Sau3AI GATC 5 cut(s) 199, 298, 899, 1221, 1324
Sau96I GGNCC 3 cut(s) 19, 841, 882
ScaI AGTACT 1 cut(s) 121
SchI GAGTC 3 cut(s) 20, 294, 1310
ScrFI CCNGG 4 cut(s) 223, 644, 834, 1390
SduI GDGCHC 1 cut(s) 1170
SexAI ACCWGGT 1 cut(s) 1388
Sfr274I CTCGAG 2 cut(s) 28, 1400
SinI GGWCC 2 cut(s) 19, 882
SlaI CTCGAG 2 cut(s) 28, 1400
SmiMI CAYNNNNRTG 1 cut(s) 797
SmlI CTYRAG 4 cut(s) 28, 349, 405, 1400
SmoI CTYRAG 4 cut(s) 28, 349, 405, 1400
SsiI CCGC 1 cut(s) 1203
SspMI CTAG 5 cut(s) 140, 516, 981, 986, 1076
SstI GAGCTC 1 cut(s) 1170
StyD4I CCNGG 4 cut(s) 221, 642, 832, 1388
StyI CCWWGG 1 cut(s) 694
TaaI ACNGT 6 cut(s) 12, 105, 165, 292, 323, 1101
TaiI ACGT 1 cut(s) 487
TaqI TCGA 3 cut(s) 29, 902, 1401
TatI WGTACW 1 cut(s) 119
TfiI GAWTC 3 cut(s) 230, 1142, 1396
Tru1I TTAA 9 cut(s) 75, 180, 368, 579, 584, 599, 1080, 1094, 1385
Tru9I TTAA 9 cut(s) 75, 180, 368, 579, 584, 599, 1080, 1094, 1385
TscAI CASTG 6 cut(s) 210, 254, 463, 901, 964, 1104
TseFI GTSAC 2 cut(s) 286, 1052
Tsp45I GTSAC 2 cut(s) 286, 1052
TspDTI ATGAA 6 cut(s) 114, 165, 243, 714, 1054, 1371
TspGWI ACGGA 1 cut(s) 170
TspRI CASTG 6 cut(s) 210, 254, 463, 901, 964, 1104
Van91I CCANNNNNTGG 1 cut(s) 529
VpaK11BI GGWCC 2 cut(s) 19, 882
XapI RAATTY 5 cut(s) 364, 537, 910, 1000, 1209
XhoI CTCGAG 2 cut(s) 28, 1400
XmnI GAANNNNTTC 1 cut(s) 631
XspI CTAG 5 cut(s) 140, 516, 981, 986, 1076
ZrmI AGTACT 1 cut(s) 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.