MD01G1150300.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
25890625 .. 25895355
4731 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1150300.v1.1.491

Sequence Viewer

Length: 1620 bp
ATGCTTAAAATAATTGGTGAAATTGCAAAGATCATGTGCGTTTCTGGGTCATCTGTGCATATGTTGGTTTATGGGCATTTGCATTTGGAAGACAAGAGAGTGCCAAGATTCTACATTTCTGGTATTCTGCCTTTGGTTCTTGACTCGAGCTTTACTTTGCAGAGCGCATACATGGGATTCTCGAGTATCATTAATATTATCTGGCCAATTCTTATGCAACTGTTTCTCCTGATGAGTACTTCATCCTCCTTACATCTAGAAGGGAATGAGACGGATAGACAGTCCTTGCTTGCATTTAAAGCTAAAATCGTGAACGATCCACTGGGCATTCTTAGCTCCTGGAATGAATCCCTCCACTTCTGTCAGTGGCAAGGCATTGCTTGTGGCCGTAGGCACCAGAGAGTCACCGTGCTGGACCTTCAATCAAGCCGGCTGGACGGTCAGCTATCTACCCACATTGGGAACTTGAGCTTTCTTAGAATTTTAAACCTCCAAAACAACAGCTTCAACAACACCATCCCTCAAGAAATTGATCGTTTGTTCCGTCTGCAACAATTACTCCTTGAAAACAACTCCTTCAGTGGTGATATTCCATTCAACATATCACGTTGCTCTAACCTCCAAATACTTGGCATAGCTAGAAACCATCTTATGGGTAAAATTCCAATTGAAATTGGTTCCTTGTCCAAGCTTCAGGTACTTAAATTAGCCAAAACCAATTTAAGTGGGGAAATCCCACCTTCTTTGGGAAATCTTTCTTCTCTCCAGGTGTTAGATGTGAAAGAAAATAATCTGCGTGGAGGCATTCCGAATAGCCTTGGCCAGTTGAAAAGACTAACATATCTTTCATTGGGTGAAAATTATTTGAATGGTACCATCCCTCCCTCCATATACAACCTCTCATCAATTACAGTCATTTCCGTGCTTCTAAACGAACTGCATGGAACTCTTCCTCCTGGGTTGGGCCACACTATATTTCCAAACCTCCAAGAATTTTATTTCTCTTCCAACCAATTCAGTGGACCGATACCAAATTCAATCTCCAATGCCTCAAGCCTTTCACTTTTTTCAATCTTATTCAATGAGTTTACAGGAAAAGTGCCTAGTCTAGCACGCCTGTCAAATTTGTATTTGTTAACACTTGCCAAAAACAGTCTTGGAAATGATGAGGAAGGTGACTTGGATTTCATCTCTTCTCTAGTTAATTGCACCAAATTAACATACTTTACTTTTAATTACAATAATTTTGGAGGAGTGCTACCTGAATCCATCAGCAATCTCTCAACAGAGCTCAACCTACTGCAATTAGGTCGTAACCAGATACGCGGAAGAATTCCCATTGGGGTCGGAAATCTAATCAACTTGGAGGTACTAGCCTTTGAGGGAAACCTATTGACAGGCACAATACCAAGTTCTATTGGTAATCTGAAAAGGTTGGATGCTCTGTATCTGAACGAGAATAAACTATCAGGTATCATCCCATCTTCGCTTGGAAATCTAACTTCATTAACCATGTTGCTTCTTATGTCAAACAAGTTAGAAGGAAACATGCCACAAAGTCTCGGAGAATGCATGAATCTTCTACCTTTAGATCTTTCCCAAAATAATCTTCGCGGTTAA

Protein Analysis

540

Amino Acids

59.34

Weight (kDa)

7.14

Isoelectric Point (pI)

44.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 90 - 128 7.7e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 133 - 239 2.4e-10 Leucine-rich repeat region
LRR_14 PF23598 224 - 308 7.7e-11 Leucine-rich repeat region
LRR_8 PF13855 230 - 289 3e-06 Leucine rich repeat
LRR_14 PF23598 430 - 532 9.9e-09 Leucine-rich repeat region
LRR_8 PF13855 454 - 513 4e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 872
AccB1I GGYRCC 2 cut(s) 393, 872
AccB7I CCANNNNNTGG 1 cut(s) 652
AccII CGCG 2 cut(s) 1326, 1614
AciI CCGC 2 cut(s) 1326, 1614
AclWI GGATC 1 cut(s) 311
AcoI YGGCCR 3 cut(s) 203, 385, 820
AcsI RAATTY 6 cut(s) 480, 660, 992, 1033, 1123, 1332
AcuI CTGAAG 2 cut(s) 562, 677
AfaI GTAC 4 cut(s) 238, 699, 874, 1371
AfiI CCNNNNNNNGG 4 cut(s) 459, 652, 746, 962
AjnI CCWGG 3 cut(s) 338, 765, 955
AjuI GAANNNNNNNTTGG 1 cut(s) 1593
AloI GAACNNNNNNTCC 2 cut(s) 937, 969
AluBI AGCT 9 cut(s) 150, 302, 336, 445, 471, 504, 638, 691, 1291
AluI AGCT 9 cut(s) 150, 302, 336, 445, 471, 504, 638, 691, 1291
Alw21I GWGCWC 1 cut(s) 1293
Alw26I GTCTC 2 cut(s) 263, 1565
AlwI GGATC 1 cut(s) 311
Ama87I CYCGRG 2 cut(s) 145, 181
AoxI GGCC 4 cut(s) 203, 385, 820, 964
ApoI RAATTY 6 cut(s) 480, 660, 992, 1033, 1123, 1332
AseI ATTAAT 1 cut(s) 192
Asp700I GAANNNNTTC 1 cut(s) 754
Asp718I GGTACC 1 cut(s) 872
AspLEI GCGC 1 cut(s) 167
AspS9I GGNCC 3 cut(s) 415, 964, 1022
AsuHPI GGTGA 5 cut(s) 29, 397, 596, 866, 1187
AvaI CYCGRG 2 cut(s) 145, 181
AvaII GGWCC 2 cut(s) 415, 1022
BalI TGGCCA 2 cut(s) 205, 822
BanI GGYRCC 2 cut(s) 393, 872
BanII GRGCYC 1 cut(s) 1293
BbsI GAAGAC 1 cut(s) 96
Bbv12I GWGCWC 1 cut(s) 1293
BccI CCATC 5 cut(s) 524, 654, 884, 1277, 1489
BceAI ACGGC 1 cut(s) 372
BcgI CGANNNNNNTGC 2 cut(s) 1292, 1326
BciT130I CCWGG 3 cut(s) 340, 767, 957
BcoDI GTCTC 2 cut(s) 263, 1565
BfaI CTAG 6 cut(s) 257, 639, 1104, 1109, 1199, 1373
BglII AGATCT 1 cut(s) 1591
BmcAI AGTACT 1 cut(s) 238
Bme1390I CCNGG 3 cut(s) 340, 767, 957
Bme18I GGWCC 2 cut(s) 415, 1022
BmeT110I CYCGRG 2 cut(s) 145, 181
BmgT120I GGNCC 3 cut(s) 415, 964, 1022
BmiI GGNNCC 3 cut(s) 395, 679, 874
BmrFI CCNGG 3 cut(s) 340, 767, 957
BmrI ACTGGG 1 cut(s) 332
BmsI GCATC 1 cut(s) 1429
BmuI ACTGGG 1 cut(s) 332
BpiI GAAGAC 1 cut(s) 96
BpmI CTGGAG 1 cut(s) 749
BpuEI CTTGAG 3 cut(s) 487, 507, 1036
BsaJI CCNNGG 2 cut(s) 817, 956
BsaXI ACNNNNNCTCC 8 cut(s) 210, 240, 543, 573, 865, 895, 937, 967
Bsc4I CCNNNNNNNGG 4 cut(s) 459, 652, 746, 962
Bse118I RCCGGY 1 cut(s) 429
Bse1I ACTGG 2 cut(s) 327, 823
Bse3DI GCAATG 1 cut(s) 375
BseBI CCWGG 3 cut(s) 340, 767, 957
BseDI CCNNGG 2 cut(s) 817, 956
BseGI GGATG 5 cut(s) 242, 516, 876, 1444, 1476
BseLI CCNNNNNNNGG 4 cut(s) 459, 652, 746, 962
BseMI GCAATG 1 cut(s) 375
BseNI ACTGG 2 cut(s) 327, 823
BseRI GAGGAG 1 cut(s) 1266
Bsh1236I CGCG 2 cut(s) 1326, 1614
BshFI GGCC 4 cut(s) 205, 387, 822, 966
BshNI GGYRCC 2 cut(s) 393, 872
BsiHKAI GWGCWC 1 cut(s) 1293
BsiHKCI CYCGRG 2 cut(s) 145, 181
BsiSI CCGG 1 cut(s) 430
BslI CCNNNNNNNGG 4 cut(s) 459, 652, 746, 962
BsmAI GTCTC 2 cut(s) 263, 1565
BsmBI CGTCTC 1 cut(s) 263
BsmI GAATGC 3 cut(s) 327, 804, 1574
BsnI GGCC 4 cut(s) 205, 387, 822, 966
BsoBI CYCGRG 2 cut(s) 145, 181
Bsp1286I GDGCHC 1 cut(s) 1293
Bsp143I GATC 4 cut(s) 30, 316, 532, 1591
BspACI CCGC 2 cut(s) 1326, 1614
BspANI GGCC 4 cut(s) 205, 387, 822, 966
BspFNI CGCG 2 cut(s) 1326, 1614
BspLI GGNNCC 3 cut(s) 395, 679, 874
BspPI GGATC 1 cut(s) 311
BspT107I GGYRCC 2 cut(s) 393, 872
BsrDI GCAATG 1 cut(s) 375
BsrFI RCCGGY 1 cut(s) 429
BsrI ACTGG 2 cut(s) 327, 823
BssAI RCCGGY 1 cut(s) 429
BssECI CCNNGG 2 cut(s) 817, 956
BssMI GATC 4 cut(s) 30, 316, 532, 1591
BssT1I CCWWGG 1 cut(s) 817
Bst2UI CCWGG 3 cut(s) 340, 767, 957
Bst4CI ACNGT 6 cut(s) 222, 282, 409, 440, 913, 1154
Bst6I CTCTTC 3 cut(s) 954, 1009, 1198
BstC8I GCNNGC 3 cut(s) 291, 431, 1114
BstDEI CTNAG 2 cut(s) 332, 476
BstF5I GGATG 5 cut(s) 242, 516, 876, 1444, 1476
BstFNI CGCG 2 cut(s) 1326, 1614
BstHHI GCGC 1 cut(s) 167
BstKTI GATC 4 cut(s) 33, 319, 535, 1594
BstMAI GTCTC 2 cut(s) 263, 1565
BstMBI GATC 4 cut(s) 30, 316, 532, 1591
BstMWI GCNNNNNNNGC 2 cut(s) 299, 333
BstNI CCWGG 3 cut(s) 340, 767, 957
BstNSI RCATGY 1 cut(s) 1552
BstSCI CCNGG 3 cut(s) 338, 765, 955
BstUI CGCG 2 cut(s) 1326, 1614
BstV2I GAAGAC 1 cut(s) 96
BstX2I RGATCY 1 cut(s) 1591
BstXI CCANNNNNNTGG 2 cut(s) 629, 1019
BstYI RGATCY 1 cut(s) 1591
BsuRI GGCC 4 cut(s) 205, 387, 822, 966
BtsCI GGATG 5 cut(s) 242, 516, 876, 1444, 1476
BtsIMutI CAGTG 4 cut(s) 320, 371, 586, 1024
Cac8I GCNNGC 3 cut(s) 291, 431, 1114
CfoI GCGC 1 cut(s) 167
Cfr10I RCCGGY 1 cut(s) 429
Cfr13I GGNCC 3 cut(s) 415, 964, 1022
Csp6I GTAC 4 cut(s) 237, 698, 873, 1370
CspCI CAANNNNNGTGG 4 cut(s) 706, 726, 741, 761
CviAII CATG 6 cut(s) 34, 172, 941, 1513, 1549, 1573
CviQI GTAC 4 cut(s) 237, 698, 873, 1370
DdeI CTNAG 2 cut(s) 332, 476
DpnI GATC 4 cut(s) 32, 318, 534, 1593
DpnII GATC 4 cut(s) 30, 316, 532, 1591
DraI TTTAAA 2 cut(s) 298, 486
EaeI YGGCCR 3 cut(s) 203, 385, 820
Eam1104I CTCTTC 3 cut(s) 954, 1009, 1198
EarI CTCTTC 3 cut(s) 954, 1009, 1198
Ecl136II GAGCTC 1 cut(s) 1291
Eco130I CCWWGG 1 cut(s) 817
Eco24I GRGCYC 1 cut(s) 1293
Eco47I GGWCC 2 cut(s) 415, 1022
Eco53kI GAGCTC 1 cut(s) 1291
Eco57I CTGAAG 2 cut(s) 562, 677
Eco88I CYCGRG 2 cut(s) 145, 181
EcoICRI GAGCTC 1 cut(s) 1291
EcoRI GAATTC 1 cut(s) 1332
EcoRII CCWGG 3 cut(s) 338, 765, 955
EcoT14I CCWWGG 1 cut(s) 817
EcoT22I ATGCAT 1 cut(s) 1574
EcoT38I GRGCYC 1 cut(s) 1293
ErhI CCWWGG 1 cut(s) 817
Esp3I CGTCTC 1 cut(s) 263
FaeI CATG 6 cut(s) 37, 175, 944, 1516, 1552, 1576
FatI CATG 6 cut(s) 33, 171, 940, 1512, 1548, 1572
FauNDI CATATG 1 cut(s) 60
FokI GGATG 5 cut(s) 229, 503, 863, 1451, 1463
FriOI GRGCYC 1 cut(s) 1293
FspBI CTAG 6 cut(s) 257, 639, 1104, 1109, 1199, 1373
GlaI GCGC 1 cut(s) 166
GsuI CTGGAG 1 cut(s) 749
HaeIII GGCC 4 cut(s) 205, 387, 822, 966
HapII CCGG 1 cut(s) 430
HhaI GCGC 1 cut(s) 167
Hin1II CATG 6 cut(s) 37, 175, 944, 1516, 1552, 1576
Hin6I GCGC 1 cut(s) 165
HinP1I GCGC 1 cut(s) 165
HincII GTYRAC 1 cut(s) 1137
HindII GTYRAC 1 cut(s) 1137
HindIII AAGCTT 1 cut(s) 689
HinfI GANTC 7 cut(s) 108, 143, 177, 347, 402, 1265, 1576
HpaI GTTAAC 1 cut(s) 1137
HpaII CCGG 1 cut(s) 430
HphI GGTGA 5 cut(s) 29, 397, 596, 866, 1187
Hpy166II GTNNAC 4 cut(s) 313, 1022, 1089, 1137
Hpy188I TCNGA 5 cut(s) 810, 1349, 1428, 1452, 1565
Hpy188III TCNNGA 6 cut(s) 140, 181, 229, 257, 310, 524
Hpy8I GTNNAC 4 cut(s) 313, 1022, 1089, 1137
HpyAV CCTTC 6 cut(s) 254, 428, 586, 750, 1166, 1535
HpyCH4III ACNGT 6 cut(s) 222, 282, 409, 440, 913, 1154
HpyCH4IV ACGT 1 cut(s) 607
HpyF10VI GCNNNNNNNGC 2 cut(s) 299, 333
HpyF3I CTNAG 2 cut(s) 332, 476
HpySE526I ACGT 1 cut(s) 607
Hsp92II CATG 6 cut(s) 37, 175, 944, 1516, 1552, 1576
HspAI GCGC 1 cut(s) 165
KpnI GGTACC 1 cut(s) 876
KroI GCCGGC 1 cut(s) 429
KroNI GCCGGC 1 cut(s) 431
KspAI GTTAAC 1 cut(s) 1137
Kzo9I GATC 4 cut(s) 30, 316, 532, 1591
LmnI GCTCC 1 cut(s) 341
LweI GCATC 1 cut(s) 1429
MaeI CTAG 6 cut(s) 257, 639, 1104, 1109, 1199, 1373
MaeII ACGT 1 cut(s) 607
MaeIII GTNAC 3 cut(s) 403, 1175, 1313
MalI GATC 4 cut(s) 32, 318, 534, 1593
MboI GATC 4 cut(s) 30, 316, 532, 1591
MboII GAAGA 9 cut(s) 101, 750, 941, 996, 1185, 1341, 1476, 1571, 1601
MfeI CAATTG 1 cut(s) 666
MflI RGATCY 1 cut(s) 1591
MhlI GDGCHC 1 cut(s) 1293
MlsI TGGCCA 2 cut(s) 205, 822
MluNI TGGCCA 2 cut(s) 205, 822
MlyI GAGTC 2 cut(s) 137, 411
MmeI TCCRAC 3 cut(s) 1032, 1327, 1416
Mox20I TGGCCA 2 cut(s) 205, 822
Mph1103I ATGCAT 1 cut(s) 1574
MroNI GCCGGC 1 cut(s) 429
MroXI GAANNNNTTC 1 cut(s) 754
MscI TGGCCA 2 cut(s) 205, 822
MslI CAYNNNNRTG 1 cut(s) 920
Msp20I TGGCCA 2 cut(s) 205, 822
MspI CCGG 1 cut(s) 430
MspR9I CCNGG 3 cut(s) 340, 767, 957
MunI CAATTG 1 cut(s) 666
Mva1269I GAATGC 3 cut(s) 327, 804, 1574
MvaI CCWGG 3 cut(s) 340, 767, 957
MvnI CGCG 2 cut(s) 1326, 1614
MwoI GCNNNNNNNGC 2 cut(s) 299, 333
NaeI GCCGGC 1 cut(s) 431
NdeI CATATG 1 cut(s) 60
NdeII GATC 4 cut(s) 30, 316, 532, 1591
NgoMIV GCCGGC 1 cut(s) 429
NlaIII CATG 6 cut(s) 37, 175, 944, 1516, 1552, 1576
NlaIV GGNNCC 3 cut(s) 395, 679, 874
NmuCI GTSAC 2 cut(s) 403, 1175
NsiI ATGCAT 1 cut(s) 1574
NspI RCATGY 1 cut(s) 1552
PaeR7I CTCGAG 2 cut(s) 145, 181
PcsI WCGNNNNNNNCGW 1 cut(s) 541
PctI GAATGC 3 cut(s) 327, 804, 1574
PdiI GCCGGC 1 cut(s) 431
PdmI GAANNNNTTC 1 cut(s) 754
PfeI GAWTC 5 cut(s) 108, 177, 347, 1265, 1576
PflMI CCANNNNNTGG 1 cut(s) 652
PfoI TCCNGGA 1 cut(s) 338
PleI GAGTC 2 cut(s) 137, 410
PpsI GAGTC 2 cut(s) 137, 410
PshBI ATTAAT 1 cut(s) 192
Psp124BI GAGCTC 1 cut(s) 1293
Psp6I CCWGG 3 cut(s) 338, 765, 955
PspGI CCWGG 3 cut(s) 338, 765, 955
PspN4I GGNNCC 3 cut(s) 395, 679, 874
PspPI GGNCC 3 cut(s) 415, 964, 1022
PspXI VCTCGAGB 1 cut(s) 145
PsuI RGATCY 1 cut(s) 1591
RsaI GTAC 4 cut(s) 238, 699, 874, 1371
RsaNI GTAC 4 cut(s) 237, 698, 873, 1370
RseI CAYNNNNRTG 1 cut(s) 920
SacI GAGCTC 1 cut(s) 1293
Sau3AI GATC 4 cut(s) 30, 316, 532, 1591
Sau96I GGNCC 3 cut(s) 415, 964, 1022
ScaI AGTACT 1 cut(s) 238
SchI GAGTC 2 cut(s) 137, 411
ScrFI CCNGG 3 cut(s) 340, 767, 957
SduI GDGCHC 1 cut(s) 1293
SfaNI GCATC 1 cut(s) 1429
Sfr274I CTCGAG 2 cut(s) 145, 181
SinI GGWCC 2 cut(s) 415, 1022
SlaI CTCGAG 2 cut(s) 145, 181
SmiMI CAYNNNNRTG 1 cut(s) 920
SmlI CTYRAG 5 cut(s) 145, 181, 466, 522, 1051
SmoI CTYRAG 5 cut(s) 145, 181, 466, 522, 1051
SsiI CCGC 2 cut(s) 1326, 1614
SspI AATATT 1 cut(s) 196
SspMI CTAG 6 cut(s) 257, 639, 1104, 1109, 1199, 1373
SstI GAGCTC 1 cut(s) 1293
StyD4I CCNGG 3 cut(s) 338, 765, 955
StyI CCWWGG 1 cut(s) 817
TaaI ACNGT 6 cut(s) 222, 282, 409, 440, 913, 1154
TaiI ACGT 1 cut(s) 610
TaqI TCGA 2 cut(s) 146, 182
TaqII GACCGA 1 cut(s) 1039
TatI WGTACW 1 cut(s) 236
TfiI GAWTC 5 cut(s) 108, 177, 347, 1265, 1576
TscAI CASTG 4 cut(s) 327, 371, 586, 1024
TseFI GTSAC 2 cut(s) 403, 1175
Tsp45I GTSAC 2 cut(s) 403, 1175
TspDTI ATGAA 6 cut(s) 231, 360, 837, 1177, 1494, 1589
TspGWI ACGGA 3 cut(s) 287, 533, 910
TspRI CASTG 4 cut(s) 327, 371, 586, 1024
Van91I CCANNNNNTGG 1 cut(s) 652
VpaK11BI GGWCC 2 cut(s) 415, 1022
VspI ATTAAT 1 cut(s) 192
XapI RAATTY 6 cut(s) 480, 660, 992, 1033, 1123, 1332
XbaI TCTAGA 1 cut(s) 256
XceI RCATGY 1 cut(s) 1552
XhoI CTCGAG 2 cut(s) 145, 181
XmnI GAANNNNTTC 1 cut(s) 754
XspI CTAG 6 cut(s) 257, 639, 1104, 1109, 1199, 1373
ZrmI AGTACT 1 cut(s) 238
Zsp2I ATGCAT 1 cut(s) 1574
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.