Rmu_ssc0000067.1_g000064
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000067.1
Physical Location & Seq
Forward (+)
246484 .. 249620
3137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000067.1_g000064.1.cds

Sequence Viewer

Length: 2937 bp
atgcatttggaccaacccttcacctctaggctggaaggaaatgaaaccgataggctggcactcttatccatcaaagacaacatacatcatgatcccaaccgcgtcctgagctcctggaataactccattcacttctgcttgtggcacggtgtcacttgcagttcaaggcatcgtcagagagtcaccatgctggacctcaactcccaaggcctggctggcttcatatccccacacatcggaaatttgagctttttaagggaacttcgcctccataacaataacttcactcaagaaattcctccacaaattgggcaattgcgtaggttacaggtacttgatttagagaataactcatttactggccctattcctgtcaacacatctaattgcttcaacctcacctctctctatttcagtggcaaccagctggtgggtgaaattccttctaatcttggtttcttgtctaagcttcaaatacttgttttacaaattaataatttaaatggagaaatccctccttcattggggaacctttcatctcttaccgtacttgctgcatatgataacaacttggtggggagcatacctagttctcttggccaattgaaaatgttaacctatttctcgttgggcgataataagttgtctggtaccatccctccttccatttacaacctatctgctattgaaacattttctataacgcataaccaaattcaggggagtattccctcacacttgagcactgcatttcctaacctcaagttctttcacatttggacgaatgaatttactggggtcattcctttgtcgatatccaatgcaacgagtctattgtctttcagtgttggaggtaacaatctaacaggacaagtgcccaatttgcgaaatcttcataacctcacaaggttctctgtcatgtataatcatctcggaagtggtaaacagggagacttgagctttgtctcaaagttggtgaatgccacacagttaacacggttggttttagcctacaacaatttcggaggcacgttgcctacagcaatatgcaatctctcaaccagtctcgaaatgctttgggttcatggaaaccaactacatggaagcatcccaactggtttaggaagtcttgtgaatttgcaatcactcgctttgggggataactccttcacaggtagcatccccgctgacattgggaagcgttcaacgcttgtggaattgtatcttgaggacaaccaattatcaggaagcattccatcttctcttggaaatttaaccatgttaacccgtctatacttgctagcaaataatcttagcggcagcatcccttcgagtctagggaaatgccacgggttgttggaattggatctttctcaaaatatccttaatggtacaataccccatcaactacttagtggtctcctctccttatcaattattctcaacttgtccagaaaccactttgttggttcccttcctgtgcagatcggcaagttgagaaatctaggtgaacttgacgtttccgagaacatgttatcgggagagcttcctaatagcctcggtgattgtcagagtttagaagtcctacacttacagggaaattacttcaaggggctcattccatcatctatgaaggacttgagaggccttcgagatttagacctttctcgaaacaatttgtccggacatattccacagttctttaagggctttggaaacttggagaatctgaacctatccttcaatcacttatgggggggagtaccaattgggggtgcttttaagaatgcaagtgcaacatcagttgttggaaacaccgcactctgcggaggtattgcagagcttcgacttcctgtgtgcaaatctgaagtgtctaaagcaagaggtttgtctcgtacaataaaaatagttatggctttagtattcgggtttactctgttggtaattgctatggtgatatccttcttacttcatcgtaagaaaaggaaagcaattaagttgagcactttggggaactcttttttgcaagtctcgtatgctatgctcctaaaagcaactgacgggttttcttccactaatttgattggtgtgggtggttttggttctgtgtacaaaggaattctcgatggtgataaggttgtcgctgtaaaggtgcttaacatggtacagaggggagcttcaaagagtttcatagctgaatgtgaagcactgagaaatatcaggcatcgaaacctggtcaagattgtaactgcatgttcaagtgttgattttcgtggaaatgatttcaaggctctagtttatgaattcatggaaaatgggagcttagaagagtggttgcatccttccattggaattgaaactgtaatagatgcacccaaaactttaagtcttgtccagaggcttgatatcgccattgatgttgcttctacattggattatcttcacaatcattgtgaaacaccaatagttcattgtgatctcaaaccaagtaacgtccttttggataaagagctgactgcacatgtttccgactttggacttgcaaggtttctctcaaaattaactgataacgtttctggaaatcaatcaagctccattggaataagaggatcggttggttatactgctccagaaatgtttactgggaagagacctactgatcctatattcagtgacagcttgaatcttcataactttgtgaagatggctctacctgaacatgttgaggagattacagattcacaacttgaaggaggcatcaccacttttgatgaagctcgcaatcaacccatcataaatccacaaaaaactgaagagtgcttaaagttgatatttggaattggaattgcgagttctgctgaatccccaacaaaccgaaaggatataagtgatgttgtatctgaattgcacaccgtcaggaacaatctttttggctag

Protein Analysis

978

Amino Acids

106.45

Weight (kDa)

7.03

Isoelectric Point (pI)

34.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 650
AccB1I GGYRCC 1 cut(s) 650
AccB7I CCANNNNNTGG 3 cut(s) 211, 308, 430
AccII CGCG 1 cut(s) 102
AccIII TCCGGA 1 cut(s) 1682
AciI CCGC 5 cut(s) 100, 1185, 1317, 1818, 1827
AclI AACGTT 1 cut(s) 2571
AclWI GGATC 4 cut(s) 86, 1374, 2617, 2654
AcoI YGGCCR 1 cut(s) 598
AcsI RAATTY 9 cut(s) 241, 294, 438, 714, 788, 1135, 1270, 2118, 2303
AcuI CTGAAG 2 cut(s) 1887, 2832
AfaI GTAC 8 cut(s) 333, 549, 652, 1393, 1764, 1897, 2111, 2166
AfiI CCNNNNNNNGG 8 cut(s) 211, 236, 308, 430, 524, 718, 1772, 2348
AflIII ACRYGT 3 cut(s) 1530, 2521, 2719
AjnI CCWGG 3 cut(s) 113, 210, 2232
AloI GAACNNNNNNTCC 2 cut(s) 252, 284
Alw21I GWGCWC 3 cut(s) 113, 746, 2006
Alw26I GTCTC 7 cut(s) 945, 970, 1070, 1424, 1896, 2035, 2644
AlwI GGATC 4 cut(s) 86, 1374, 2617, 2654
Aor13HI TCCGGA 1 cut(s) 1682
AoxI GGCC 4 cut(s) 208, 361, 598, 1645
ApeKI GCWGC 2 cut(s) 554, 1320
ApoI RAATTY 9 cut(s) 241, 294, 438, 714, 788, 1135, 1270, 2118, 2303
ArsI GACNNNNNNTTYG 2 cut(s) 944, 976
AseI ATTAAT 1 cut(s) 492
Asp718I GGTACC 1 cut(s) 650
AspS9I GGNCC 3 cut(s) 10, 193, 362
AsuNHI GCTAGC 1 cut(s) 1300
AvaII GGWCC 2 cut(s) 10, 193
BaeGI GKGCMC 1 cut(s) 879
BalI TGGCCA 1 cut(s) 600
BanI GGYRCC 1 cut(s) 650
BanII GRGCYC 2 cut(s) 113, 1617
Bbv12I GWGCWC 3 cut(s) 113, 746, 2006
BbvI GCAGC 2 cut(s) 541, 1332
BccI CCATC 8 cut(s) 77, 662, 1264, 1410, 1630, 2120, 2698, 2798
BciT130I CCWGG 3 cut(s) 115, 212, 2234
BcoDI GTCTC 7 cut(s) 945, 970, 1070, 1424, 1896, 2035, 2644
BfaI CTAG 7 cut(s) 27, 588, 1301, 1337, 1505, 2294, 2935
BfmI CTRYAG 1 cut(s) 1038
BglI GCCNNNNNGGC 1 cut(s) 216
BisI GCNGC 3 cut(s) 555, 1318, 1321
BlsI GCNGC 3 cut(s) 556, 1319, 1322
Bme1390I CCNGG 3 cut(s) 115, 212, 2234
Bme18I GGWCC 2 cut(s) 10, 193
BmgT120I GGNCC 3 cut(s) 10, 193, 362
BmiI GGNNCC 3 cut(s) 530, 652, 1471
BmrFI CCNGG 3 cut(s) 115, 212, 2234
BmrI ACTGGG 2 cut(s) 804, 2652
BmsI GCATC 8 cut(s) 178, 1116, 1188, 1332, 2233, 2347, 2359, 2766
BmtI GCTAGC 1 cut(s) 1304
BmuI ACTGGG 2 cut(s) 804, 2652
BplI GAGNNNNNCTC 2 cut(s) 335, 367
BpmI CTGGAG 1 cut(s) 2613
Bpu10I CCTNAGC 1 cut(s) 107
BpuEI CTTGAG 6 cut(s) 273, 746, 760, 976, 1247, 1660
BsaI GGTCTC 2 cut(s) 1424, 2644
BsaJI CCNNGG 3 cut(s) 205, 1348, 1558
BsaWI WCCGGW 1 cut(s) 1682
BsaXI ACNNNNNCTCC 6 cut(s) 185, 215, 252, 282, 643, 673
Bsc4I CCNNNNNNNGG 8 cut(s) 211, 236, 308, 430, 524, 718, 1772, 2348
Bse1I ACTGG 5 cut(s) 364, 799, 1062, 1120, 2647
BseAI TCCGGA 1 cut(s) 1682
BseBI CCWGG 3 cut(s) 115, 212, 2234
BseDI CCNNGG 3 cut(s) 205, 1348, 1558
BseGI GGATG 5 cut(s) 654, 1107, 1179, 1323, 2338
BseLI CCNNNNNNNGG 8 cut(s) 211, 236, 308, 430, 524, 718, 1772, 2348
BseMII CTCAG 2 cut(s) 98, 2201
BseNI ACTGG 5 cut(s) 364, 799, 1062, 1120, 2647
BseRI GAGGAG 2 cut(s) 1412, 2741
BseSI GKGCMC 1 cut(s) 879
BseXI GCAGC 2 cut(s) 541, 1332
BsgI GTGCAG 2 cut(s) 1502, 2502
Bsh1236I CGCG 1 cut(s) 102
BshFI GGCC 4 cut(s) 210, 363, 600, 1647
BshNI GGYRCC 1 cut(s) 650
BsiHKAI GWGCWC 3 cut(s) 113, 746, 2006
BsiSI CCGG 1 cut(s) 1683
BslI CCNNNNNNNGG 8 cut(s) 211, 236, 308, 430, 524, 718, 1772, 2348
BsmAI GTCTC 7 cut(s) 945, 970, 1070, 1424, 1896, 2035, 2644
BsmI GAATGC 3 cut(s) 985, 1251, 1792
BsnI GGCC 4 cut(s) 210, 363, 600, 1647
Bso31I GGTCTC 2 cut(s) 1424, 2644
Bsp1286I GDGCHC 5 cut(s) 113, 746, 879, 1617, 2006
Bsp13I TCCGGA 1 cut(s) 1682
Bsp1407I TGTACA 1 cut(s) 2109
Bsp143I GATC 6 cut(s) 91, 1366, 1485, 2476, 2609, 2659
BspACI CCGC 5 cut(s) 100, 1185, 1317, 1818, 1827
BspANI GGCC 4 cut(s) 210, 363, 600, 1647
BspCNI CTCAG 2 cut(s) 99, 2202
BspEI TCCGGA 1 cut(s) 1682
BspFNI CGCG 1 cut(s) 102
BspHI TCATGA 1 cut(s) 88
BspLI GGNNCC 3 cut(s) 530, 652, 1471
BspOI GCTAGC 1 cut(s) 1304
BspPI GGATC 4 cut(s) 86, 1374, 2617, 2654
BspT107I GGYRCC 1 cut(s) 650
BspTNI GGTCTC 2 cut(s) 1424, 2644
BsrGI TGTACA 1 cut(s) 2109
BsrI ACTGG 5 cut(s) 364, 799, 1062, 1120, 2647
BssECI CCNNGG 3 cut(s) 205, 1348, 1558
BssMI GATC 6 cut(s) 91, 1366, 1485, 2476, 2609, 2659
BssT1I CCWWGG 1 cut(s) 205
Bst2UI CCWGG 3 cut(s) 115, 212, 2234
Bst4CI ACNGT 7 cut(s) 149, 547, 990, 999, 1698, 2362, 2914
Bst6I CTCTTC 3 cut(s) 2322, 2642, 2808
BstAUI TGTACA 1 cut(s) 2109
BstC8I GCNNGC 4 cut(s) 57, 217, 1302, 2779
BstDEI CTNAG 6 cut(s) 107, 465, 1313, 1412, 2210, 2323
BstDSI CCRYGG 1 cut(s) 1348
BstF5I GGATG 5 cut(s) 654, 1107, 1179, 1323, 2338
BstFNI CGCG 1 cut(s) 102
BstKTI GATC 6 cut(s) 94, 1369, 1488, 2479, 2612, 2662
BstMAI GTCTC 7 cut(s) 945, 970, 1070, 1424, 1896, 2035, 2644
BstMBI GATC 6 cut(s) 91, 1366, 1485, 2476, 2609, 2659
BstMWI GCNNNNNNNGC 5 cut(s) 108, 216, 883, 1207, 2855
BstNI CCWGG 3 cut(s) 115, 212, 2234
BstNSI RCATGY 4 cut(s) 1534, 2256, 2525, 2723
BstSCI CCNGG 3 cut(s) 113, 210, 2232
BstSFI CTRYAG 1 cut(s) 1038
BstSLI GKGCMC 1 cut(s) 879
BstUI CGCG 1 cut(s) 102
BstV1I GCAGC 2 cut(s) 541, 1332
BstX2I RGATCY 1 cut(s) 1366
BstXI CCANNNNNNTGG 2 cut(s) 1100, 1466
BstYI RGATCY 1 cut(s) 1366
BsuRI GGCC 4 cut(s) 210, 363, 600, 1647
BtgI CCRYGG 1 cut(s) 1348
BtsCI GGATG 5 cut(s) 654, 1107, 1179, 1323, 2338
BtsI GCAGTG 1 cut(s) 744
BtsIMutI CAGTG 5 cut(s) 421, 744, 850, 2207, 2677
Cac8I GCNNGC 4 cut(s) 57, 217, 1302, 2779
CciI TCATGA 1 cut(s) 88
Cfr13I GGNCC 3 cut(s) 10, 193, 362
CseI GACGC 1 cut(s) 91
CsiI ACCWGGT 1 cut(s) 2232
Csp6I GTAC 8 cut(s) 332, 548, 651, 1392, 1763, 1896, 2110, 2165
CspCI CAANNNNNGTGG 2 cut(s) 1194, 1229
CviQI GTAC 8 cut(s) 332, 548, 651, 1392, 1763, 1896, 2110, 2165
DdeI CTNAG 6 cut(s) 107, 465, 1313, 1412, 2210, 2323
DpnI GATC 6 cut(s) 93, 1368, 1487, 2478, 2611, 2661
DpnII GATC 6 cut(s) 91, 1366, 1485, 2476, 2609, 2659
DraI TTTAAA 1 cut(s) 501
EaeI YGGCCR 1 cut(s) 598
Eam1104I CTCTTC 3 cut(s) 2322, 2642, 2808
EarI CTCTTC 3 cut(s) 2322, 2642, 2808
Ecl136II GAGCTC 1 cut(s) 111
Eco130I CCWWGG 1 cut(s) 205
Eco147I AGGCCT 2 cut(s) 210, 1647
Eco24I GRGCYC 2 cut(s) 113, 1617
Eco31I GGTCTC 2 cut(s) 1424, 2644
Eco32I GATATC 3 cut(s) 816, 1959, 2407
Eco47I GGWCC 2 cut(s) 10, 193
Eco53kI GAGCTC 1 cut(s) 111
Eco57I CTGAAG 2 cut(s) 1887, 2832
EcoICRI GAGCTC 1 cut(s) 111
EcoRI GAATTC 2 cut(s) 2118, 2303
EcoRII CCWGG 3 cut(s) 113, 210, 2232
EcoRV GATATC 3 cut(s) 816, 1959, 2407
EcoT14I CCWWGG 1 cut(s) 205
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 2 cut(s) 113, 1617
ErhI CCWWGG 1 cut(s) 205
FauI CCCGC 1 cut(s) 1192
FauNDI CATATG 1 cut(s) 559
Fnu4HI GCNGC 3 cut(s) 555, 1318, 1321
FokI GGATG 5 cut(s) 641, 1094, 1166, 1310, 2325
FriOI GRGCYC 2 cut(s) 113, 1617
Fsp4HI GCNGC 3 cut(s) 555, 1318, 1321
FspBI CTAG 7 cut(s) 27, 588, 1301, 1337, 1505, 2294, 2935
GluI GCNGC 3 cut(s) 555, 1318, 1321
GsuI CTGGAG 1 cut(s) 2613
HaeIII GGCC 4 cut(s) 210, 363, 600, 1647
HapII CCGG 1 cut(s) 1683
HgaI GACGC 1 cut(s) 91
HincII GTYRAC 4 cut(s) 376, 615, 993, 1284
HindII GTYRAC 4 cut(s) 376, 615, 993, 1284
HindIII AAGCTT 1 cut(s) 467
HinfI GANTC 7 cut(s) 180, 829, 1333, 1726, 2683, 2738, 2861
HpaI GTTAAC 3 cut(s) 615, 993, 1284
HpaII CCGG 1 cut(s) 1683
Hpy166II GTNNAC 9 cut(s) 376, 615, 944, 993, 1284, 1511, 1932, 2110, 2640
Hpy8I GTNNAC 9 cut(s) 376, 615, 944, 993, 1284, 1511, 1932, 2110, 2640
HpyCH4III ACNGT 7 cut(s) 149, 547, 990, 999, 1698, 2362, 2914
HpyCH4IV ACGT 4 cut(s) 1031, 1518, 2493, 2571
HpyF10VI GCNNNNNNNGC 5 cut(s) 108, 216, 883, 1207, 2855
HpyF3I CTNAG 6 cut(s) 107, 465, 1313, 1412, 2210, 2323
HpySE526I ACGT 4 cut(s) 1031, 1518, 2493, 2571
Kpn2I TCCGGA 1 cut(s) 1682
KpnI GGTACC 1 cut(s) 654
KspAI GTTAAC 3 cut(s) 615, 993, 1284
Kzo9I GATC 6 cut(s) 91, 1366, 1485, 2476, 2609, 2659
LmnI GCTCC 7 cut(s) 116, 579, 2049, 2174, 2319, 2597, 2632
Lsp1109I GCAGC 2 cut(s) 541, 1332
LweI GCATC 8 cut(s) 178, 1116, 1188, 1332, 2233, 2347, 2359, 2766
MabI ACCWGGT 1 cut(s) 2232
MaeI CTAG 7 cut(s) 27, 588, 1301, 1337, 1505, 2294, 2935
MaeII ACGT 4 cut(s) 1031, 1518, 2493, 2571
MaeIII GTNAC 7 cut(s) 151, 181, 324, 854, 2245, 2489, 2672
MalI GATC 6 cut(s) 93, 1368, 1487, 2478, 2611, 2661
MboI GATC 6 cut(s) 91, 1366, 1485, 2476, 2609, 2659
MboII GAAGA 9 cut(s) 884, 1251, 2061, 2339, 2432, 2659, 2678, 2713, 2825
MfeI CAATTG 3 cut(s) 314, 602, 1767
MflI RGATCY 1 cut(s) 1366
MhlI GDGCHC 5 cut(s) 113, 746, 879, 1617, 2006
MlsI TGGCCA 1 cut(s) 600
MluNI TGGCCA 1 cut(s) 600
MlyI GAGTC 3 cut(s) 189, 838, 1342
MmeI TCCRAC 4 cut(s) 829, 1338, 1789, 2553
Mox20I TGGCCA 1 cut(s) 600
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 1682
MscI TGGCCA 1 cut(s) 600
Msp20I TGGCCA 1 cut(s) 600
MspA1I CMGCKG 2 cut(s) 427, 1187
MspI CCGG 1 cut(s) 1683
MspR9I CCNGG 3 cut(s) 115, 212, 2234
MunI CAATTG 3 cut(s) 314, 602, 1767
Mva1269I GAATGC 3 cut(s) 985, 1251, 1792
MvaI CCWGG 3 cut(s) 115, 212, 2234
MvnI CGCG 1 cut(s) 102
MwoI GCNNNNNNNGC 5 cut(s) 108, 216, 883, 1207, 2855
NdeI CATATG 1 cut(s) 559
NdeII GATC 6 cut(s) 91, 1366, 1485, 2476, 2609, 2659
NheI GCTAGC 1 cut(s) 1300
NlaIV GGNNCC 3 cut(s) 530, 652, 1471
NmuCI GTSAC 3 cut(s) 151, 181, 2672
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 4 cut(s) 1534, 2256, 2525, 2723
PagI TCATGA 1 cut(s) 88
PceI AGGCCT 2 cut(s) 210, 1647
PciI ACATGT 3 cut(s) 1530, 2521, 2719
PctI GAATGC 3 cut(s) 985, 1251, 1792
PfeI GAWTC 4 cut(s) 1726, 2683, 2738, 2861
PflMI CCANNNNNTGG 3 cut(s) 211, 308, 430
PfoI TCCNGGA 1 cut(s) 113
PkrI GCNGC 3 cut(s) 556, 1319, 1322
PleI GAGTC 3 cut(s) 188, 837, 1341
PpsI GAGTC 3 cut(s) 188, 837, 1341
PscI ACATGT 3 cut(s) 1530, 2521, 2719
PshBI ATTAAT 1 cut(s) 492
Psp124BI GAGCTC 1 cut(s) 113
Psp1406I AACGTT 1 cut(s) 2571
Psp6I CCWGG 3 cut(s) 113, 210, 2232
PspGI CCWGG 3 cut(s) 113, 210, 2232
PspN4I GGNNCC 3 cut(s) 530, 652, 1471
PspPI GGNCC 3 cut(s) 10, 193, 362
PsuI RGATCY 1 cut(s) 1366
PvuII CAGCTG 1 cut(s) 427
RsaI GTAC 8 cut(s) 333, 549, 652, 1393, 1764, 1897, 2111, 2166
RsaNI GTAC 8 cut(s) 332, 548, 651, 1392, 1763, 1896, 2110, 2165
SacI GAGCTC 1 cut(s) 113
SatI GCNGC 3 cut(s) 555, 1318, 1321
Sau3AI GATC 6 cut(s) 91, 1366, 1485, 2476, 2609, 2659
Sau96I GGNCC 3 cut(s) 10, 193, 362
SchI GAGTC 3 cut(s) 189, 838, 1342
ScrFI CCNGG 3 cut(s) 115, 212, 2234
SduI GDGCHC 5 cut(s) 113, 746, 879, 1617, 2006
SexAI ACCWGGT 1 cut(s) 2232
SfaNI GCATC 8 cut(s) 178, 1116, 1188, 1332, 2233, 2347, 2359, 2766
SfcI CTRYAG 1 cut(s) 1038
SinI GGWCC 2 cut(s) 10, 193
SmiI ATTTAAAT 1 cut(s) 501
SmlI CTYRAG 6 cut(s) 288, 739, 761, 955, 1226, 1639
SmoI CTYRAG 6 cut(s) 288, 739, 761, 955, 1226, 1639
SseBI AGGCCT 2 cut(s) 210, 1647
SsiI CCGC 5 cut(s) 100, 1185, 1317, 1818, 1827
SspMI CTAG 7 cut(s) 27, 588, 1301, 1337, 1505, 2294, 2935
SstI GAGCTC 1 cut(s) 113
StuI AGGCCT 2 cut(s) 210, 1647
StyD4I CCNGG 3 cut(s) 113, 210, 2232
StyI CCWWGG 1 cut(s) 205
SwaI ATTTAAAT 1 cut(s) 501
TaaI ACNGT 7 cut(s) 149, 547, 990, 999, 1698, 2362, 2914
TaiI ACGT 4 cut(s) 1034, 1521, 2496, 2574
TaqI TCGA 8 cut(s) 812, 1068, 1331, 1651, 1669, 1846, 2124, 2227
TatI WGTACW 1 cut(s) 2109
TauI GCSGC 1 cut(s) 1320
TfiI GAWTC 4 cut(s) 1726, 2683, 2738, 2861
TscAI CASTG 5 cut(s) 421, 751, 850, 2214, 2677
TseFI GTSAC 3 cut(s) 151, 181, 2672
TseI GCWGC 2 cut(s) 554, 1320
Tsp45I GTSAC 3 cut(s) 151, 181, 2672
TspRI CASTG 5 cut(s) 421, 751, 850, 2214, 2677
Van91I CCANNNNNTGG 3 cut(s) 211, 308, 430
VpaK11BI GGWCC 2 cut(s) 10, 193
VspI ATTAAT 1 cut(s) 492
XapI RAATTY 9 cut(s) 241, 294, 438, 714, 788, 1135, 1270, 2118, 2303
XceI RCATGY 4 cut(s) 1534, 2256, 2525, 2723
XcmI CCANNNNNNNNNTGG 1 cut(s) 212
XspI CTAG 7 cut(s) 27, 588, 1301, 1337, 1505, 2294, 2935
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.