MD07G1218300.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
29584650 .. 29586700
2051 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1218300.v1.1.491

Sequence Viewer

Length: 1806 bp
ATGCTTTTTGGACATGTGTGCCAAGTGTTTGAACCTCTTTACAAAGTTTTACGGATCGTTGACACAGAAGTGTATCCTACCATCAGCAATTGCACCAAATTAGAAGTTTTATCTGTCGGCCTCAATAATTTTGGAGGAGTGCTGCCTGAATCTATCAGCAATCTCTCAACAAAGCTCAGGAAAATAAATTTTCATGACAATCAAATACGCGGAAACATTCCCAACGGGGTTGGAAATCTCATCAACTTGGAGAGACTGGGCTTTTCAACAAATTTATTGGCAGGCACTATACCGAATTCAATAGGTAAATTGAATAAGCTTTATGAAATATATCTACATTTAAATGAATTGTCAGGTAATGTTCCATCATCTCTAGGAAATCTCACTTCCTTAAGCAATTTGTATCTCCAATCAAACCAGTTAAATGGAAGCATACCACAAAGTCTCGGAGACTGCAGGTTTATGATATATTTGGATCTTTCTCATAACAATCTTAGCGGTCCAATTCCAAAACAAGTCATCAATTTACCTATTTACTTGAATCTATCTGGAAACCAACTTACTGAATCTATTCCCATGGAAGTAGGCAACGTACAACTTCTTGCTTTCTTGGATGTTTCTGAAAACAAGCTATCTGGTGAGATTCCACAAAGCTTAGGGAGTTGCACAAGTTTGACGACTCTGTCCCTGAGAGAAAATTTATTGCAGGGGACAATTCCTAAATCCTTGAGCTCTTTGAGAGGAATTGAAGATTTTGACCTCTCTCGCAACAACTTGTCTGGCATAATTCCTAACTACTTGGGGAGTTTCCCCTTCTTGCAGAATTTGAACCTTTCATTTAACGATTTTGAAGGTGCAGTACCAATCCAAGGAGTTTTTAAGAATCCAAGTGTGGTATCTGTTGTGGGAAACACGCGGCTTTGTGGAGGTATACCTCACTTAAGATTGCCTAAATGCATCTCCAAGCAATCTAAGCGCGGGTTATCTCCTAAGTTGAACTTAATTATCTCAGTTTCCTGTGGGGTTGTCGGCGTGGTCTTGGTGTTGTTACTTGCCCTTCTTTATCGATCAAGAAAGGCTAGAGAGCTTAAGTCAACTTCAGGATCATCACTGGGGGTTTCACTCTTGAAACTGTCCTATGGAGATCTCCTCAAAGCAACTGATGGGTTCTCTGCTTCGAATCTGATTGGTTCTGGAAGTTTCGGGTCCGTGTACAAGGGAGTTCTCAATCAGCATGAAGAAAGAAATGTTGCGGTGAAAGTACTCAATCTTCAAACTTCAAGAGCTTCTAAAAGTTTCATATCTGAATGTGAAGCCTTGAAAAGCATTAGGCATCGAAATCTTGTCAAGCTACTGACTGCTTGTTCAAGCATTGATTTTCAAGGAAACGATTTCAAAGCCCTGGTGTATGAGTTCATGGTGAATGGAAGCCTAGATGAGTCATTGCACATATCAGCTCAAGGAGTAGATAGGCCAGCCAATCTGCCAAAGAATCTGAATCTCACTCAAAGAGTTAACATTGCCATCGATGTAGCATGCGCTCTGGATTATTTGCACAACCACTCCCACATGCCAATAGTTCATTGTGATATAAAGCCCAGCAACATTTTGTTAGCATATGGAATGGGAGGCGAGCTGTCAACATATGGCGATGTGTATAACTACGGAATACTGTTGTTGGAGATGTTAACTGGCAAGAGGCCGACATATGACATGTTTAAAGGTGGTATGGACCTGCACAATTTTGTTATAACGGCTCTACCAGACATGTGGAAGAAATATGTGATCCACTACTTGTTCAAATAG

Protein Analysis

602

Amino Acids

65.8

Weight (kDa)

8.78

Isoelectric Point (pI)

32.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 22 - 138 4.5e-08 Leucine-rich repeat region
LRR_14 PF23598 179 - 282 3.2e-07 Leucine-rich repeat region
LRR_8 PF13855 224 - 283 7.5e-08 Leucine rich repeat
Pkinase PF00069 392 - 539 1e-22 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 393 - 539 6.9e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1751
AasI GACNNNNNNGTC 1 cut(s) 682
Acc36I ACCTGC 2 cut(s) 447, 1743
AccI GTMKAC 1 cut(s) 931
AccII CGCG 3 cut(s) 210, 916, 978
AciI CCGC 5 cut(s) 210, 498, 916, 978, 1253
AclWI GGATC 4 cut(s) 62, 483, 1111, 1780
AcsI RAATTY 5 cut(s) 187, 271, 295, 697, 823
AcuI CTGAAG 1 cut(s) 1083
AfaI GTAC 4 cut(s) 594, 861, 1214, 1263
AfiI CCNNNNNNNGG 1 cut(s) 869
AflII CTTAAG 3 cut(s) 391, 940, 1088
AflIII ACRYGT 3 cut(s) 13, 1713, 1767
AjnI CCWGG 1 cut(s) 1401
AleI CACNNNNGTG 1 cut(s) 68
Alw21I GWGCWC 1 cut(s) 734
Alw26I GTCTC 3 cut(s) 247, 444, 449
AlwI GGATC 4 cut(s) 62, 483, 1111, 1780
AoxI GGCC 3 cut(s) 118, 1472, 1700
ApeKI GCWGC 1 cut(s) 142
ApoI RAATTY 5 cut(s) 187, 271, 295, 697, 823
Asp700I GAANNNNTTC 1 cut(s) 570
AspLEI GCGC 2 cut(s) 978, 1541
AspS9I GGNCC 3 cut(s) 500, 1206, 1732
AsuHPI GGTGA 3 cut(s) 650, 1267, 1432
AsuII TTCGAA 1 cut(s) 1178
AvaII GGWCC 3 cut(s) 500, 1206, 1732
BanII GRGCYC 1 cut(s) 734
BarI GAAGNNNNNNTAC 4 cut(s) 843, 875, 1254, 1286
Bbv12I GWGCWC 1 cut(s) 734
BbvI GCAGC 1 cut(s) 129
BccI CCATC 4 cut(s) 89, 373, 1157, 1532
BceAI ACGGC 1 cut(s) 1770
BciT130I CCWGG 1 cut(s) 1403
BciVI GTATCC 1 cut(s) 84
BcoDI GTCTC 3 cut(s) 247, 444, 449
BfaI CTAG 3 cut(s) 374, 1080, 1433
BfmI CTRYAG 1 cut(s) 454
BfrI CTTAAG 3 cut(s) 391, 940, 1088
BfuAI ACCTGC 2 cut(s) 447, 1743
BfuI GTATCC 1 cut(s) 84
BglII AGATCT 1 cut(s) 1144
BisI GCNGC 2 cut(s) 143, 917
BlsI GCNGC 2 cut(s) 144, 918
BmcAI AGTACT 1 cut(s) 1263
Bme1390I CCNGG 1 cut(s) 1403
Bme18I GGWCC 3 cut(s) 500, 1206, 1732
BmgT120I GGNCC 3 cut(s) 500, 1206, 1732
BmiI GGNNCC 1 cut(s) 1207
BmrFI CCNGG 1 cut(s) 1403
BmrI ACTGGG 2 cut(s) 266, 1121
BmsI GCATC 2 cut(s) 966, 1342
BmuI ACTGGG 2 cut(s) 266, 1121
BplI GAGNNNNNCTC 2 cut(s) 1134, 1166
Bpu10I CCTNAGC 2 cut(s) 176, 655
Bpu14I TTCGAA 1 cut(s) 1178
BpuEI CTTGAG 2 cut(s) 748, 1443
Bsa29I ATCGAT 2 cut(s) 1066, 1527
BsaJI CCNNGG 3 cut(s) 576, 868, 1401
BsaXI ACNNNNNCTCC 2 cut(s) 1547, 1577
Bsc4I CCNNNNNNNGG 1 cut(s) 869
Bse1I ACTGG 4 cut(s) 261, 418, 1116, 1696
Bse3DI GCAATG 2 cut(s) 1442, 1518
BseBI CCWGG 1 cut(s) 1403
BseCI ATCGAT 2 cut(s) 1066, 1527
BseDI CCNNGG 3 cut(s) 576, 868, 1401
BseGI GGATG 1 cut(s) 619
BseLI CCNNNNNNNGG 1 cut(s) 869
BseMI GCAATG 2 cut(s) 1442, 1518
BseMII CTCAG 3 cut(s) 190, 680, 1023
BseNI ACTGG 4 cut(s) 261, 418, 1116, 1696
BseRI GAGGAG 2 cut(s) 150, 1139
BseXI GCAGC 1 cut(s) 129
BseYI CCCAGC 1 cut(s) 1598
BsgI GTGCAG 2 cut(s) 876, 1721
Bsh1236I CGCG 3 cut(s) 210, 916, 978
BshFI GGCC 3 cut(s) 120, 1474, 1702
BshVI ATCGAT 2 cut(s) 1066, 1527
BsiHKAI GWGCWC 1 cut(s) 734
BslFI GGGAC 2 cut(s) 670, 724
BslI CCNNNNNNNGG 1 cut(s) 869
BsmAI GTCTC 3 cut(s) 247, 444, 449
BsmFI GGGAC 2 cut(s) 670, 724
BsnI GGCC 3 cut(s) 120, 1474, 1702
Bsp119I TTCGAA 1 cut(s) 1178
Bsp1286I GDGCHC 1 cut(s) 734
Bsp1407I TGTACA 1 cut(s) 1212
Bsp143I GATC 6 cut(s) 54, 475, 1067, 1103, 1144, 1785
Bsp19I CCATGG 1 cut(s) 576
BspACI CCGC 5 cut(s) 210, 498, 916, 978, 1253
BspANI GGCC 3 cut(s) 120, 1474, 1702
BspCNI CTCAG 3 cut(s) 189, 681, 1022
BspDI ATCGAT 2 cut(s) 1066, 1527
BspFNI CGCG 3 cut(s) 210, 916, 978
BspHI TCATGA 1 cut(s) 193
BspLI GGNNCC 1 cut(s) 1207
BspMAI CTGCAG 1 cut(s) 458
BspMI ACCTGC 2 cut(s) 447, 1743
BspPI GGATC 4 cut(s) 62, 483, 1111, 1780
BspT104I TTCGAA 1 cut(s) 1178
BspTI CTTAAG 3 cut(s) 391, 940, 1088
BsrDI GCAATG 2 cut(s) 1442, 1518
BsrGI TGTACA 1 cut(s) 1212
BsrI ACTGG 4 cut(s) 261, 418, 1116, 1696
BssECI CCNNGG 3 cut(s) 576, 868, 1401
BssMI GATC 6 cut(s) 54, 475, 1067, 1103, 1144, 1785
BssNAI GTATAC 1 cut(s) 932
BssT1I CCWWGG 2 cut(s) 576, 868
Bst1107I GTATAC 1 cut(s) 932
Bst2UI CCWGG 1 cut(s) 1403
Bst4CI ACNGT 2 cut(s) 1134, 1674
BstAFI CTTAAG 3 cut(s) 391, 940, 1088
BstAUI TGTACA 1 cut(s) 1212
BstBI TTCGAA 1 cut(s) 1178
BstC8I GCNNGC 4 cut(s) 283, 1476, 1537, 1634
BstDEI CTNAG 7 cut(s) 176, 494, 655, 689, 972, 990, 1009
BstDSI CCRYGG 1 cut(s) 576
BstF5I GGATG 1 cut(s) 619
BstFNI CGCG 3 cut(s) 210, 916, 978
BstHHI GCGC 2 cut(s) 978, 1541
BstKTI GATC 6 cut(s) 57, 478, 1070, 1106, 1147, 1788
BstMAI GTCTC 3 cut(s) 247, 444, 449
BstMBI GATC 6 cut(s) 54, 475, 1067, 1103, 1144, 1785
BstMWI GCNNNNNNNGC 1 cut(s) 973
BstNI CCWGG 1 cut(s) 1403
BstNSI RCATGY 5 cut(s) 17, 1539, 1573, 1717, 1771
BstSCI CCNGG 1 cut(s) 1401
BstSFI CTRYAG 1 cut(s) 454
BstUI CGCG 3 cut(s) 210, 916, 978
BstV1I GCAGC 1 cut(s) 129
BstX2I RGATCY 2 cut(s) 475, 1144
BstXI CCANNNNNNTGG 2 cut(s) 425, 1770
BstYI RGATCY 2 cut(s) 475, 1144
BstZ17I GTATAC 1 cut(s) 932
Bsu15I ATCGAT 2 cut(s) 1066, 1527
BsuI GTATCC 1 cut(s) 84
BsuRI GGCC 3 cut(s) 120, 1474, 1702
BsuTUI ATCGAT 2 cut(s) 1066, 1527
BtgI CCRYGG 1 cut(s) 576
BtgZI GCGATG 1 cut(s) 1665
BtsCI GGATG 1 cut(s) 619
BtsIMutI CAGTG 1 cut(s) 1109
BveI ACCTGC 2 cut(s) 447, 1743
Cac8I GCNNGC 4 cut(s) 283, 1476, 1537, 1634
CciI TCATGA 1 cut(s) 193
CfoI GCGC 2 cut(s) 978, 1541
Cfr13I GGNCC 3 cut(s) 500, 1206, 1732
ClaI ATCGAT 2 cut(s) 1066, 1527
Csp6I GTAC 4 cut(s) 593, 860, 1213, 1262
CviAII CATG 9 cut(s) 14, 194, 577, 1235, 1417, 1536, 1570, 1714, 1768
CviQI GTAC 4 cut(s) 593, 860, 1213, 1262
DdeI CTNAG 7 cut(s) 176, 494, 655, 689, 972, 990, 1009
DpnI GATC 6 cut(s) 56, 477, 1069, 1105, 1146, 1787
DpnII GATC 6 cut(s) 54, 475, 1067, 1103, 1144, 1785
DraI TTTAAA 2 cut(s) 342, 1720
DrdI GACNNNNNNGTC 1 cut(s) 682
DseDI GACNNNNNNGTC 1 cut(s) 682
Ecl136II GAGCTC 1 cut(s) 732
Eco130I CCWWGG 2 cut(s) 576, 868
Eco24I GRGCYC 1 cut(s) 734
Eco47I GGWCC 3 cut(s) 500, 1206, 1732
Eco53kI GAGCTC 1 cut(s) 732
Eco57I CTGAAG 1 cut(s) 1083
EcoICRI GAGCTC 1 cut(s) 732
EcoRI GAATTC 1 cut(s) 295
EcoRII CCWGG 1 cut(s) 1401
EcoT14I CCWWGG 2 cut(s) 576, 868
EcoT22I ATGCAT 1 cut(s) 959
EcoT38I GRGCYC 1 cut(s) 734
ErhI CCWWGG 2 cut(s) 576, 868
FaeI CATG 9 cut(s) 17, 197, 580, 1238, 1420, 1539, 1573, 1717, 1771
FalI AAGNNNNNCTT 2 cut(s) 983, 1015
FaqI GGGAC 2 cut(s) 670, 724
FatI CATG 9 cut(s) 13, 193, 576, 1234, 1416, 1535, 1569, 1713, 1767
FauI CCCGC 1 cut(s) 971
FauNDI CATATG 3 cut(s) 1618, 1645, 1708
FblI GTMKAC 1 cut(s) 931
Fnu4HI GCNGC 2 cut(s) 143, 917
FokI GGATG 1 cut(s) 626
FriOI GRGCYC 1 cut(s) 734
Fsp4HI GCNGC 2 cut(s) 143, 917
FspBI CTAG 3 cut(s) 374, 1080, 1433
GlaI GCGC 2 cut(s) 977, 1540
GluI GCNGC 2 cut(s) 143, 917
GsaI CCCAGC 1 cut(s) 1602
HaeIII GGCC 3 cut(s) 120, 1474, 1702
HhaI GCGC 2 cut(s) 978, 1541
Hin1II CATG 9 cut(s) 17, 197, 580, 1238, 1420, 1539, 1573, 1717, 1771
Hin6I GCGC 2 cut(s) 976, 1539
HinP1I GCGC 2 cut(s) 976, 1539
HincII GTYRAC 5 cut(s) 61, 1095, 1516, 1641, 1689
HindII GTYRAC 5 cut(s) 61, 1095, 1516, 1641, 1689
HindIII AAGCTT 2 cut(s) 317, 652
HpaI GTTAAC 2 cut(s) 1516, 1689
HphI GGTGA 3 cut(s) 650, 1267, 1432
Hpy166II GTNNAC 7 cut(s) 61, 932, 1095, 1213, 1516, 1641, 1689
Hpy188I TCNGA 5 cut(s) 449, 622, 1185, 1306, 1497
Hpy188III TCNNGA 9 cut(s) 178, 194, 549, 1071, 1101, 1126, 1194, 1281, 1544
Hpy8I GTNNAC 7 cut(s) 61, 932, 1095, 1213, 1516, 1641, 1689
HpyAV CCTTC 3 cut(s) 823, 845, 1067
HpyCH4III ACNGT 2 cut(s) 1134, 1674
HpyCH4IV ACGT 1 cut(s) 591
HpyF10VI GCNNNNNNNGC 1 cut(s) 973
HpyF3I CTNAG 7 cut(s) 176, 494, 655, 689, 972, 990, 1009
HpySE526I ACGT 1 cut(s) 591
Hsp92II CATG 9 cut(s) 17, 197, 580, 1238, 1420, 1539, 1573, 1717, 1771
HspAI GCGC 2 cut(s) 976, 1539
KspAI GTTAAC 2 cut(s) 1516, 1689
Kzo9I GATC 6 cut(s) 54, 475, 1067, 1103, 1144, 1785
Lsp1109I GCAGC 1 cut(s) 129
LweI GCATC 2 cut(s) 966, 1342
MaeI CTAG 3 cut(s) 374, 1080, 1433
MaeII ACGT 1 cut(s) 591
MaeIII GTNAC 1 cut(s) 1047
MalI GATC 6 cut(s) 56, 477, 1069, 1105, 1146, 1787
MboI GATC 6 cut(s) 54, 475, 1067, 1103, 1144, 1785
MboII GAAGA 4 cut(s) 761, 1250, 1262, 1786
MfeI CAATTG 1 cut(s) 88
MflI RGATCY 2 cut(s) 475, 1144
MhlI GDGCHC 1 cut(s) 734
MlyI GAGTC 2 cut(s) 673, 1448
MmeI TCCRAC 2 cut(s) 211, 1659
Mph1103I ATGCAT 1 cut(s) 959
MroXI GAANNNNTTC 1 cut(s) 570
MslI CAYNNNNRTG 2 cut(s) 68, 342
MspCI CTTAAG 3 cut(s) 391, 940, 1088
MspR9I CCNGG 1 cut(s) 1403
MunI CAATTG 1 cut(s) 88
MvaI CCWGG 1 cut(s) 1403
MvnI CGCG 3 cut(s) 210, 916, 978
MwoI GCNNNNNNNGC 1 cut(s) 973
NcoI CCATGG 1 cut(s) 576
NdeI CATATG 3 cut(s) 1618, 1645, 1708
NdeII GATC 6 cut(s) 54, 475, 1067, 1103, 1144, 1785
NlaIII CATG 9 cut(s) 17, 197, 580, 1238, 1420, 1539, 1573, 1717, 1771
NlaIV GGNNCC 1 cut(s) 1207
NsiI ATGCAT 1 cut(s) 959
NspI RCATGY 5 cut(s) 17, 1539, 1573, 1717, 1771
NspV TTCGAA 1 cut(s) 1178
OliI CACNNNNGTG 1 cut(s) 68
PaeI GCATGC 1 cut(s) 1539
PagI TCATGA 1 cut(s) 193
PciI ACATGT 3 cut(s) 13, 1713, 1767
PdmI GAANNNNTTC 1 cut(s) 570
PfeI GAWTC 8 cut(s) 149, 541, 566, 643, 883, 1180, 1492, 1498
PflFI GACNNNGTC 1 cut(s) 682
PkrI GCNGC 2 cut(s) 144, 918
PleI GAGTC 2 cut(s) 673, 1447
PpsI GAGTC 2 cut(s) 673, 1447
PscI ACATGT 3 cut(s) 13, 1713, 1767
PsiI TTATAA 1 cut(s) 1751
Psp124BI GAGCTC 1 cut(s) 734
Psp6I CCWGG 1 cut(s) 1401
PspFI CCCAGC 1 cut(s) 1598
PspGI CCWGG 1 cut(s) 1401
PspN4I GGNNCC 1 cut(s) 1207
PspPI GGNCC 3 cut(s) 500, 1206, 1732
PstI CTGCAG 1 cut(s) 458
PsuI RGATCY 2 cut(s) 475, 1144
PsyI GACNNNGTC 1 cut(s) 682
RsaI GTAC 4 cut(s) 594, 861, 1214, 1263
RsaNI GTAC 4 cut(s) 593, 860, 1213, 1262
RseI CAYNNNNRTG 2 cut(s) 68, 342
SacI GAGCTC 1 cut(s) 734
SatI GCNGC 2 cut(s) 143, 917
Sau3AI GATC 6 cut(s) 54, 475, 1067, 1103, 1144, 1785
Sau96I GGNCC 3 cut(s) 500, 1206, 1732
ScaI AGTACT 1 cut(s) 1263
SchI GAGTC 2 cut(s) 673, 1448
ScrFI CCNGG 1 cut(s) 1403
SduI GDGCHC 1 cut(s) 734
SfaNI GCATC 2 cut(s) 966, 1342
SfcI CTRYAG 1 cut(s) 454
SfuI TTCGAA 1 cut(s) 1178
SinI GGWCC 3 cut(s) 500, 1206, 1732
SmiI ATTTAAAT 1 cut(s) 342
SmiMI CAYNNNNRTG 2 cut(s) 68, 342
SmlI CTYRAG 5 cut(s) 391, 727, 940, 1088, 1458
SmoI CTYRAG 5 cut(s) 391, 727, 940, 1088, 1458
SphI GCATGC 1 cut(s) 1539
SsiI CCGC 5 cut(s) 210, 498, 916, 978, 1253
SspMI CTAG 3 cut(s) 374, 1080, 1433
SstI GAGCTC 1 cut(s) 734
StyD4I CCNGG 1 cut(s) 1401
StyI CCWWGG 2 cut(s) 576, 868
SwaI ATTTAAAT 1 cut(s) 342
TaaI ACNGT 2 cut(s) 1134, 1674
TaiI ACGT 1 cut(s) 594
TaqI TCGA 4 cut(s) 1066, 1178, 1336, 1527
TatI WGTACW 2 cut(s) 1212, 1261
TauI GCSGC 1 cut(s) 919
TfiI GAWTC 8 cut(s) 149, 541, 566, 643, 883, 1180, 1492, 1498
TscAI CASTG 1 cut(s) 1116
TseI GCWGC 1 cut(s) 142
TspDTI ATGAA 8 cut(s) 182, 339, 360, 825, 1251, 1288, 1405, 1571
TspGWI ACGGA 3 cut(s) 67, 1198, 1680
TspRI CASTG 1 cut(s) 1116
Tth111I GACNNNGTC 1 cut(s) 682
Vha464I CTTAAG 3 cut(s) 391, 940, 1088
VpaK11BI GGWCC 3 cut(s) 500, 1206, 1732
XapI RAATTY 5 cut(s) 187, 271, 295, 697, 823
XceI RCATGY 5 cut(s) 17, 1539, 1573, 1717, 1771
XmiI GTMKAC 1 cut(s) 931
XmnI GAANNNNTTC 1 cut(s) 570
XspI CTAG 3 cut(s) 374, 1080, 1433
ZrmI AGTACT 1 cut(s) 1263
Zsp2I ATGCAT 1 cut(s) 959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.