pycom01g16820
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
16293809 .. 16295039
1231 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g16820.2

Sequence Viewer

Length: 1131 bp
ATGGGGAGTAGCCCAAGACCATATAAGCACATAGCAAACATTGTCCCTCACCGATGTGGGACAACTCTCAACAGAGATCTCCTCAAAGCAACTAATGGGTTTTCTTCTCGGAATTTGATTGGTGCTGGTAGCTTCGGGTCTGTGTACAGGGGAATTATCAATCAGGAAGAAAGAATTGTTGCAGTGAAAGTACTCAATGCTCATTGTTCAAGAGAAAGTTTCATAGCTGAATGTGAAGCCTTGAAAAACATTAGGCGCCGAAATCTTATCAAATTACTGACCGTGTGTTTAAGTATTGACTTTCAAGGAAACGATTTCAAAGCTTTGGTTTATGAATTCATGATGAATGGAAATCTAGAAGAGTGGCTGCATTTTTCAGCTCATAGACCACCTGGGGCACCCATTGTGCATGGGCATTTGAACCTTATTCAGAGGGTAAACATTGCCATCGACGTGGCTAATGCTCTGAATTATTTGCACAACCAATGCCACATACCAATAGTTCATTGTGATTTGAAACCCAGCAACGTTCTCTTGGAAGGCAACATGACTGCCCGTGTTGCAGATTTTGGTTTAGCAAGGTACGTCCAGGATGCTTCGTGTTCACTTCCTTCACACAGAAGCACTGCCAATGTCATAAATGGCTCCATAGGCTATATTGCCACAGAGTACGGCATGGGAAATGAGGTTTCAGCATATGGAGATGTGTATAGCTACGGAATCCTGCTGTTGGAGATGCTTACTGGAAAGAGACCGACGGATGAAATGTTCAAAGATGGTCTGACCCTCCACAACTTTGTTCAGATGGCATTGCCTGAACGCGTAGAAGAAATATGTGATCCAGTGCTTCTTCAAGTTAAAACAAGCAGCATTTGTAGTAATGCCACAAACAATAGGAACCATGTCCAAGATGATCAAAGGCAAAGAATTAGCAAGTGCTTGGTTATCATGGCCAAGATAGGAGTTGCTTGTTCCGCAGAGTTGCCGAGAGAGCGGATGGATATTGGACGTGTTGTAGAAGGATTATGCCTGGTTAGGGATGTGCTAACTGGAACCTCAATTCCTATATATCATATGATCGATCACTCACGGCCTAATCAGCCCGTAAAACATCTGCTTTTGTTCGAGTAA

Protein Analysis

377

Amino Acids

41.9

Weight (kDa)

7.98

Isoelectric Point (pI)

35.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 255, 397
AccBSI CCGCTC 1 cut(s) 994
AccII CGCG 1 cut(s) 822
AciI CCGC 2 cut(s) 975, 994
AclI AACGTT 1 cut(s) 528
AclWI GGATC 1 cut(s) 833
AcoI YGGCCR 1 cut(s) 951
AcsI RAATTY 2 cut(s) 112, 335
AcyI GRCGYC 1 cut(s) 256
AfaI GTAC 4 cut(s) 146, 192, 584, 671
AfiI CCNNNNNNNGG 2 cut(s) 730, 1036
AflIII ACRYGT 2 cut(s) 820, 1009
AgsI TTSAA 8 cut(s) 210, 244, 305, 319, 421, 517, 772, 854
AjiI CACGTC 2 cut(s) 454, 1010
AjnI CCWGG 3 cut(s) 391, 588, 1029
AleI CACNNNNGTG 1 cut(s) 54
AloI GAACNNNNNNTCC 4 cut(s) 752, 784, 1045, 1077
AluBI AGCT 5 cut(s) 132, 227, 323, 380, 714
AluI AGCT 5 cut(s) 132, 227, 323, 380, 714
Alw26I GTCTC 1 cut(s) 745
AlwI GGATC 1 cut(s) 833
AoxI GGCC 2 cut(s) 951, 1091
ApeKI GCWGC 2 cut(s) 367, 867
ApoI RAATTY 2 cut(s) 112, 335
AspLEI GCGC 1 cut(s) 258
AsuHPI GGTGA 1 cut(s) 41
BaeGI GKGCMC 1 cut(s) 400
BalI TGGCCA 1 cut(s) 953
BanI GGYRCC 2 cut(s) 255, 397
BbvI GCAGC 2 cut(s) 354, 879
BccI CCATC 4 cut(s) 455, 770, 799, 991
BceAI ACGGC 2 cut(s) 688, 1106
BciT130I CCWGG 3 cut(s) 393, 590, 1031
BclI TGATCA 1 cut(s) 913
BcoDI GTCTC 1 cut(s) 745
BfaI CTAG 1 cut(s) 356
BfoI RGCGCY 1 cut(s) 259
BglII AGATCT 1 cut(s) 76
BisI GCNGC 2 cut(s) 368, 868
BlsI GCNGC 2 cut(s) 369, 869
BmcAI AGTACT 1 cut(s) 192
Bme1390I CCNGG 3 cut(s) 393, 590, 1031
BmgBI CACGTC 2 cut(s) 454, 1010
BmiI GGNNCC 5 cut(s) 257, 399, 646, 899, 1054
BmrFI CCNGG 3 cut(s) 393, 590, 1031
BmsI GCATC 2 cut(s) 583, 726
BplI GAGNNNNNCTC 2 cut(s) 66, 98
Bsa29I ATCGAT 1 cut(s) 1080
BsaHI GRCGYC 1 cut(s) 256
BsaI GGTCTC 1 cut(s) 745
BsaJI CCNNGG 1 cut(s) 392
Bsc4I CCNNNNNNNGG 2 cut(s) 730, 1036
Bse1I ACTGG 3 cut(s) 748, 842, 1054
Bse3DI GCAATG 2 cut(s) 441, 809
BseBI CCWGG 3 cut(s) 393, 590, 1031
BseCI ATCGAT 1 cut(s) 1080
BseDI CCNNGG 1 cut(s) 392
BseGI GGATG 4 cut(s) 598, 766, 1002, 1045
BseLI CCNNNNNNNGG 2 cut(s) 730, 1036
BseMI GCAATG 2 cut(s) 441, 809
BseNI ACTGG 3 cut(s) 748, 842, 1054
BseRI GAGGAG 1 cut(s) 71
BseSI GKGCMC 1 cut(s) 400
BseXI GCAGC 2 cut(s) 354, 879
BseYI CCCAGC 1 cut(s) 521
Bsh1236I CGCG 1 cut(s) 822
BshFI GGCC 2 cut(s) 953, 1093
BshNI GGYRCC 2 cut(s) 255, 397
BshVI ATCGAT 1 cut(s) 1080
BslFI GGGAC 2 cut(s) 29, 73
BslI CCNNNNNNNGG 2 cut(s) 730, 1036
BsmAI GTCTC 1 cut(s) 745
BsmFI GGGAC 2 cut(s) 29, 73
BsnI GGCC 2 cut(s) 953, 1093
Bso31I GGTCTC 1 cut(s) 745
Bsp1286I GDGCHC 1 cut(s) 400
Bsp1407I TGTACA 1 cut(s) 144
Bsp143I GATC 5 cut(s) 76, 838, 913, 1077, 1081
BspACI CCGC 2 cut(s) 975, 994
BspANI GGCC 2 cut(s) 953, 1093
BspDI ATCGAT 1 cut(s) 1080
BspFNI CGCG 1 cut(s) 822
BspHI TCATGA 1 cut(s) 339
BspLI GGNNCC 5 cut(s) 257, 399, 646, 899, 1054
BspPI GGATC 1 cut(s) 833
BspT107I GGYRCC 2 cut(s) 255, 397
BspTNI GGTCTC 1 cut(s) 745
BsrBI CCGCTC 1 cut(s) 994
BsrDI GCAATG 2 cut(s) 441, 809
BsrGI TGTACA 1 cut(s) 144
BsrI ACTGG 3 cut(s) 748, 842, 1054
BssECI CCNNGG 1 cut(s) 392
BssMI GATC 5 cut(s) 76, 838, 913, 1077, 1081
BssNI GRCGYC 1 cut(s) 256
Bst2UI CCWGG 3 cut(s) 393, 590, 1031
Bst4CI ACNGT 1 cut(s) 283
Bst6I CTCTTC 1 cut(s) 354
BstACI GRCGYC 1 cut(s) 256
BstAUI TGTACA 1 cut(s) 144
BstF5I GGATG 4 cut(s) 598, 766, 1002, 1045
BstFNI CGCG 1 cut(s) 822
BstH2I RGCGCY 1 cut(s) 259
BstHHI GCGC 1 cut(s) 258
BstKTI GATC 5 cut(s) 79, 841, 916, 1080, 1084
BstMAI GTCTC 1 cut(s) 745
BstMBI GATC 5 cut(s) 76, 838, 913, 1077, 1081
BstMWI GCNNNNNNNGC 5 cut(s) 560, 651, 974, 991, 1099
BstNI CCWGG 3 cut(s) 393, 590, 1031
BstSCI CCNGG 3 cut(s) 391, 588, 1029
BstSLI GKGCMC 1 cut(s) 400
BstUI CGCG 1 cut(s) 822
BstV1I GCAGC 2 cut(s) 354, 879
BstX2I RGATCY 1 cut(s) 76
BstXI CCANNNNNNTGG 1 cut(s) 454
BstYI RGATCY 1 cut(s) 76
Bsu15I ATCGAT 1 cut(s) 1080
BsuRI GGCC 2 cut(s) 953, 1093
BsuTUI ATCGAT 1 cut(s) 1080
BtrI CACGTC 2 cut(s) 454, 1010
BtsCI GGATG 4 cut(s) 598, 766, 1002, 1045
BtsI GCAGTG 2 cut(s) 189, 624
BtsIMutI CAGTG 3 cut(s) 189, 624, 849
CciI TCATGA 1 cut(s) 339
CfoI GCGC 1 cut(s) 258
ClaI ATCGAT 1 cut(s) 1080
Csp6I GTAC 4 cut(s) 145, 191, 583, 670
CviAII CATG 6 cut(s) 340, 410, 547, 676, 902, 949
CviQI GTAC 4 cut(s) 145, 191, 583, 670
DinI GGCGCC 1 cut(s) 257
DpnI GATC 5 cut(s) 78, 840, 915, 1079, 1083
DpnII GATC 5 cut(s) 76, 838, 913, 1077, 1081
EaeI YGGCCR 1 cut(s) 951
Eam1104I CTCTTC 1 cut(s) 354
EarI CTCTTC 1 cut(s) 354
Eco31I GGTCTC 1 cut(s) 745
EcoRI GAATTC 1 cut(s) 335
EcoRII CCWGG 3 cut(s) 391, 588, 1029
EgeI GGCGCC 1 cut(s) 257
EheI GGCGCC 1 cut(s) 257
FaeI CATG 6 cut(s) 343, 413, 550, 679, 905, 952
FaqI GGGAC 2 cut(s) 29, 73
FatI CATG 6 cut(s) 339, 409, 546, 675, 901, 948
FauNDI CATATG 2 cut(s) 697, 1074
FbaI TGATCA 1 cut(s) 913
Fnu4HI GCNGC 2 cut(s) 368, 868
FokI GGATG 4 cut(s) 605, 773, 1009, 1052
Fsp4HI GCNGC 2 cut(s) 368, 868
FspBI CTAG 1 cut(s) 356
GlaI GCGC 1 cut(s) 257
GluI GCNGC 2 cut(s) 368, 868
GsaI CCCAGC 1 cut(s) 525
HaeII RGCGCY 1 cut(s) 259
HaeIII GGCC 2 cut(s) 953, 1093
HhaI GCGC 1 cut(s) 258
Hin1I GRCGYC 1 cut(s) 256
Hin1II CATG 6 cut(s) 343, 413, 550, 679, 905, 952
Hin6I GCGC 1 cut(s) 256
HinP1I GCGC 1 cut(s) 256
HindIII AAGCTT 1 cut(s) 321
HinfI GANTC 1 cut(s) 720
HphI GGTGA 1 cut(s) 41
Hpy166II GTNNAC 3 cut(s) 145, 439, 605
Hpy188I TCNGA 5 cut(s) 111, 432, 468, 783, 804
Hpy188III TCNNGA 4 cut(s) 164, 210, 340, 356
Hpy8I GTNNAC 3 cut(s) 145, 439, 605
Hpy99I CGWCG 2 cut(s) 455, 760
HpyAV CCTTC 3 cut(s) 533, 621, 1013
HpyCH4III ACNGT 1 cut(s) 283
HpyCH4IV ACGT 4 cut(s) 453, 528, 585, 1009
HpyCH4V TGCA 5 cut(s) 182, 370, 409, 478, 563
HpyF10VI GCNNNNNNNGC 5 cut(s) 560, 651, 974, 991, 1099
HpySE526I ACGT 4 cut(s) 453, 528, 585, 1009
Hsp92I GRCGYC 1 cut(s) 256
Hsp92II CATG 6 cut(s) 343, 413, 550, 679, 905, 952
HspAI GCGC 1 cut(s) 256
KasI GGCGCC 1 cut(s) 255
Ksp22I TGATCA 1 cut(s) 913
Kzo9I GATC 5 cut(s) 76, 838, 913, 1077, 1081
LmnI GCTCC 1 cut(s) 650
Lsp1109I GCAGC 2 cut(s) 354, 879
LweI GCATC 2 cut(s) 583, 726
MaeI CTAG 1 cut(s) 356
MaeII ACGT 4 cut(s) 453, 528, 585, 1009
MalI GATC 5 cut(s) 78, 840, 915, 1079, 1083
MbiI CCGCTC 1 cut(s) 994
MboI GATC 5 cut(s) 76, 838, 913, 1077, 1081
MboII GAAGA 5 cut(s) 96, 179, 371, 839, 842
MflI RGATCY 1 cut(s) 76
MhlI GDGCHC 1 cut(s) 400
MlsI TGGCCA 1 cut(s) 953
MluCI AATT 8 cut(s) 112, 153, 174, 272, 335, 469, 927, 1059
MluI ACGCGT 1 cut(s) 820
MluNI TGGCCA 1 cut(s) 953
Mly113I GGCGCC 1 cut(s) 256
MmeI TCCRAC 1 cut(s) 711
MnlI CCTC 6 cut(s) 57, 92, 426, 679, 797, 1066
Mox20I TGGCCA 1 cut(s) 953
MscI TGGCCA 1 cut(s) 953
MseI TTAA 2 cut(s) 290, 858
MslI CAYNNNNRTG 2 cut(s) 54, 452
Msp20I TGGCCA 1 cut(s) 953
MspR9I CCNGG 3 cut(s) 393, 590, 1031
MvaI CCWGG 3 cut(s) 393, 590, 1031
MvnI CGCG 1 cut(s) 822
MwoI GCNNNNNNNGC 5 cut(s) 560, 651, 974, 991, 1099
NarI GGCGCC 1 cut(s) 256
NdeI CATATG 2 cut(s) 697, 1074
NdeII GATC 5 cut(s) 76, 838, 913, 1077, 1081
NlaIII CATG 6 cut(s) 343, 413, 550, 679, 905, 952
NlaIV GGNNCC 5 cut(s) 257, 399, 646, 899, 1054
NmeAIII GCCGAG 1 cut(s) 1011
OliI CACNNNNGTG 1 cut(s) 54
PagI TCATGA 1 cut(s) 339
PfeI GAWTC 1 cut(s) 720
PfoI TCCNGGA 1 cut(s) 588
PkrI GCNGC 2 cut(s) 369, 869
PluTI GGCGCC 1 cut(s) 259
Psp1406I AACGTT 1 cut(s) 528
Psp6I CCWGG 3 cut(s) 391, 588, 1029
PspFI CCCAGC 1 cut(s) 521
PspGI CCWGG 3 cut(s) 391, 588, 1029
PspN4I GGNNCC 5 cut(s) 257, 399, 646, 899, 1054
PsuI RGATCY 1 cut(s) 76
RsaI GTAC 4 cut(s) 146, 192, 584, 671
RsaNI GTAC 4 cut(s) 145, 191, 583, 670
RseI CAYNNNNRTG 2 cut(s) 54, 452
SaqAI TTAA 2 cut(s) 290, 858
SatI GCNGC 2 cut(s) 368, 868
Sau3AI GATC 5 cut(s) 76, 838, 913, 1077, 1081
ScaI AGTACT 1 cut(s) 192
ScrFI CCNGG 3 cut(s) 393, 590, 1031
SduI GDGCHC 1 cut(s) 400
SfaNI GCATC 2 cut(s) 583, 726
SfoI GGCGCC 1 cut(s) 257
SmiMI CAYNNNNRTG 2 cut(s) 54, 452
Sse9I AATT 8 cut(s) 112, 153, 174, 272, 335, 469, 927, 1059
SsiI CCGC 2 cut(s) 975, 994
SspDI GGCGCC 1 cut(s) 255
SspMI CTAG 1 cut(s) 356
StyD4I CCNGG 3 cut(s) 391, 588, 1029
TaaI ACNGT 1 cut(s) 283
TaiI ACGT 4 cut(s) 456, 531, 588, 1012
TaqI TCGA 3 cut(s) 450, 1080, 1125
TaqII GACCGA 1 cut(s) 769
TasI AATT 8 cut(s) 112, 153, 174, 272, 335, 469, 927, 1059
TatI WGTACW 2 cut(s) 144, 190
TfiI GAWTC 1 cut(s) 720
Tru1I TTAA 2 cut(s) 290, 858
Tru9I TTAA 2 cut(s) 290, 858
TscAI CASTG 3 cut(s) 189, 631, 849
TseI GCWGC 2 cut(s) 367, 867
TspDTI ATGAA 6 cut(s) 211, 328, 348, 359, 494, 777
TspGWI ACGGA 2 cut(s) 732, 773
TspRI CASTG 3 cut(s) 189, 631, 849
XapI RAATTY 2 cut(s) 112, 335
XbaI TCTAGA 1 cut(s) 355
XspI CTAG 1 cut(s) 356
ZrmI AGTACT 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.