RchiOBHm_Chr1g0356561
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
49005778 .. 49008357
2580 bp
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UTR
Exon/CDS
Intron
PRQ58191

Sequence Viewer

Length: 2286 bp
ATGAAATCAACATATCATATACATTCCCCTCTAGTTAATATACCAATCAATCAGCAATTCGAAATGGGGGTTTTGGTTGTCAAATTGATCCTACTACACTCACTCTTCACTGCAACGTTCATCTTATGCAGTAGCTCCATGCACTTGAACCACTATCCCTTAACCGGGCGACTCCAAGGGAATGAAACGGATTGGCTGGCATTACTTGCAATCAAAGCTCAAATACAACATGATCCCAACAAGGTCACAAGCTCATGGAATGACTCCCTTCATTTTTGCATGTGGCATGGCGTCACCTGCAGTCGACGACATCGCCAAAGAGTGACAAAGCTGGAGCTGGGTTCTCTAGCGTTGGTGGGATCCATATCTCCGCACATAGGAAATCTAAGCTTCTTACGAGGGCTAAATCTCAAGAACAACAGCTTCACTCATCAAATCCCTCCTCAAATTGGGAATTTGCACAGATTGCAGGTATTGGCTTTAAACAATAACTCACTTAATGGTACTATTCCTGCCAACATATCCAATTGCTTCAAACTCACCATTCTCATTCTAATTAGAAACAATCTAGTGGGTAAAATTCCTCCCCAACTCAGTTCCTTGTCAAAGCTTCAAGTTTTAAGTTTGCAATGGAACAATTTAACAAGAGAGATCCCTGCTTCTTTTGGGAACCTTTCATCTCTCGAGGCATTTGCTGTAACTTCTAATAACTTAGAAGGAAGCATTCCTAGTTCTCTATGCCAGTTGAAAAAATTAACATTTTTTGCTTCTGACGTAAATAGGTTGTCTGGTATCATCCCTTCCTGCATTTATAACCTCTCCGGTATAGTTCAATTCGTGGTATCAGTAAACCAAATTCAAGGAACTCTTCCATCAAACTTGAGCAATGGTTTTCCCAACCTTCAATTATTTTCTATTGCCGAGAATCAATTTACCGGGCCCATCCCTTGGTCAATATCCAATGCAATAAATCTTGTGTCGTTTCACTGTGCAAGAAACAAACTCACTGGACATGTCCCAAATATACAAAATCTTCATAACCTTAGAATATTCTTTGTTGATGATAATAATCTTGGAAGTGGTAAACAAGGTGACTTGAGTTTTGTCTCAGAATTGATCAATGCCACACTACTTACTCGATTGGTTTTCAGCCACAACAATTTTGGAGGGACGTTGCCCAAATCAGTATCCAATCTCTCAACCAATCTAGATACACTTTGGTTTTCAGGAAACCAACTACATGGAAGCATCCCAGTTGGATTAGGGAATCTTGTCAACTTGCAAATACTTGTTACGGAGGAAAACTCCTTCACAGGTACCATCCCCACAGACATTGGGAGGCTTTCAAGTCTTAAGGCATTGTATCTTAACAACAACCAGTTATCAGGAAGAATTCCAACTTCTCTAGGAAACTTAACATTGTTAACAATACTTTATTTGCAAGAAAATAATCTAGAGGGTAGCATCCCTTCCAGCCTAGGGAAGTACCATTGGTTATTAGAATTGGTTCTTTCTGGAAACAATCTGAATGGTACGATACCTCCTCAGGTTTTTGGCCTCTCATCTTTATCAACAATTCTGGCATTGGATAGAAACAATTTGACCGGTTCCCTTCCAATGGAGATTGGAGAATTGAAGAATCTAGGGGTATTGAACGTTTCCAATAACTTTTTATCAGGAGAACTTCCCAATAGCCTCGGCAATTGCGAGAGCTTAGAAGCTTTACATTTGCAAGGCAACTCATTCAACGGGCTCATCCCTTCATCTATGAAGGAATTGAGAGGGATTCGAGATTTAGACATCTCTCGCAACAATTTTTCAGGAGAAATTCCACAGTTTTTCGAGCGCTTTGGAAACATGGAGAATCTAAACATATCCTTCAATCAGTTTTGGGGAGCATTACCAACTGGTGGTATTTTTAAAAATGCAAGTGCGACTTCAGTTACTGGAAATGCTAGACTCTGCGGCGGTATTGCTAATTTTCGACTTCCTGTGTGCAAGTCTAACAAATCTAAAGGAGGAGGATTATCCCGTAGAATGAAACTAATGATCTCTCTAGTTTCCGGGTTCACTCTTTTGGGACTAGCTGTGGTGCTATCTCTTTTTTTTCTTGGTAAGAAAAGGAAAGAAAGTGAATTGAGCACTATGGGGAAATCTATGCTGCAACTTTCATATGCTACTATTCTAAAAGCTACTGATGGGTTCTCTTCAATCAAATTGGTGTGGGTGCTTTTGGATCTGTATACAAAGGAATACTTGCTGAAAATAGCATTACTGTTGCTGTGA

Protein Analysis

761

Amino Acids

83.29

Weight (kDa)

9.44

Isoelectric Point (pI)

31.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 62 - 101 3e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 121 - 209 1.2e-09 Leucine-rich repeat region
LRR_14 PF23598 421 - 501 9.6e-06 Leucine-rich repeat region
LRR_14 PF23598 535 - 624 3.1e-07 Leucine-rich repeat region
LRR_8 PF13855 571 - 630 6.5e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 813
AarI CACCTGC 1 cut(s) 305
Acc36I ACCTGC 2 cut(s) 305, 460
Acc65I GGTACC 1 cut(s) 1316
AccB1I GGYRCC 1 cut(s) 1316
AccB7I CCANNNNNTGG 2 cut(s) 948, 1910
AccI GTMKAC 2 cut(s) 304, 2243
AciI CCGC 3 cut(s) 371, 1965, 1968
AclI AACGTT 2 cut(s) 116, 1656
AclWI GGATC 6 cut(s) 82, 227, 354, 367, 646, 2244
AcsI RAATTY 5 cut(s) 454, 579, 855, 1392, 1827
AcuI CTGAAG 1 cut(s) 1923
AcyI GRCGYC 1 cut(s) 291
AfaI GTAC 4 cut(s) 505, 1318, 1487, 1534
AfeI AGCGCT 1 cut(s) 1847
AfiI CCNNNNNNNGG 8 cut(s) 164, 165, 377, 449, 948, 1479, 1618, 1910
AflII CTTAAG 1 cut(s) 1352
AflIII ACRYGT 1 cut(s) 1012
AgeI ACCGGT 1 cut(s) 1604
Alw21I GWGCWC 1 cut(s) 2144
Alw26I GTCTC 1 cut(s) 1111
AlwI GGATC 6 cut(s) 82, 227, 354, 367, 646, 2244
AlwNI CAGNNNCTG 1 cut(s) 1946
Ama87I CYCGRG 1 cut(s) 683
Aor51HI AGCGCT 1 cut(s) 1847
AoxI GGCC 2 cut(s) 938, 1555
ApaI GGGCCC 1 cut(s) 942
ApeKI GCWGC 1 cut(s) 2161
ApoI RAATTY 5 cut(s) 454, 579, 855, 1392, 1827
ArsI GACNNNNNNTTYG 2 cut(s) 1085, 1117
AsiGI ACCGGT 1 cut(s) 1604
Asp700I GAANNNNTTC 1 cut(s) 1506
Asp718I GGTACC 1 cut(s) 1316
AspA2I CCTAGG 1 cut(s) 1477
AspLEI GCGC 1 cut(s) 1848
AspS9I GGNCC 2 cut(s) 938, 939
AsuC2I CCSGG 3 cut(s) 166, 937, 2065
AsuHPI GGTGA 3 cut(s) 286, 532, 1103
AsuII TTCGAA 1 cut(s) 60
AvaI CYCGRG 1 cut(s) 683
AvrII CCTAGG 1 cut(s) 1477
AxyI CCTNAGG 1 cut(s) 1545
BaeGI GKGCMC 1 cut(s) 942
BamHI GGATCC 1 cut(s) 359
BanI GGYRCC 1 cut(s) 1316
BanII GRGCYC 2 cut(s) 942, 1755
BarI GAAGNNNNNNTAC 4 cut(s) 784, 816, 1453, 1485
Bbv12I GWGCWC 1 cut(s) 2144
BbvI GCAGC 1 cut(s) 2148
BccI CCATC 4 cut(s) 880, 950, 1328, 2192
BcgI CGANNNNNNTGC 2 cut(s) 674, 708
BciVI GTATCC 1 cut(s) 1198
BclI TGATCA 1 cut(s) 1116
BcnI CCSGG 3 cut(s) 166, 937, 2065
BcoDI GTCTC 1 cut(s) 1111
BfmI CTRYAG 1 cut(s) 298
BfoI RGCGCY 1 cut(s) 1849
BfrI CTTAAG 1 cut(s) 1352
BfuAI ACCTGC 2 cut(s) 305, 460
BfuI GTATCC 1 cut(s) 1198
BisI GCNGC 2 cut(s) 1966, 2162
BlnI CCTAGG 1 cut(s) 1477
BlsI GCNGC 2 cut(s) 1967, 2163
Bme1390I CCNGG 3 cut(s) 166, 937, 2065
BmeT110I CYCGRG 1 cut(s) 683
BmgT120I GGNCC 2 cut(s) 938, 939
BmiI GGNNCC 5 cut(s) 361, 671, 940, 1318, 1609
BmrFI CCNGG 3 cut(s) 166, 937, 2065
BmrI ACTGGG 1 cut(s) 1247
BmsI GCATC 2 cut(s) 1257, 1473
BmuI ACTGGG 1 cut(s) 1247
BplI GAGNNNNNCTC 2 cut(s) 1289, 1321
BpmI CTGGAG 1 cut(s) 353
Bpu14I TTCGAA 1 cut(s) 60
BpuEI CTTGAG 3 cut(s) 395, 901, 1117
BpuMI CCSGG 3 cut(s) 166, 937, 2065
BsaBI GATNNNNATC 2 cut(s) 364, 1068
BsaHI GRCGYC 1 cut(s) 291
BsaJI CCNNGG 4 cut(s) 175, 947, 1477, 1696
BsaWI WCCGGW 2 cut(s) 821, 1604
BsaXI ACNNNNNCTCC 2 cut(s) 1525, 1555
Bsc4I CCNNNNNNNGG 8 cut(s) 164, 165, 377, 449, 948, 1479, 1618, 1910
Bse118I RCCGGY 1 cut(s) 1604
Bse1I ACTGG 6 cut(s) 742, 1012, 1253, 1378, 1912, 1951
Bse21I CCTNAGG 1 cut(s) 1545
Bse3DI GCAATG 2 cut(s) 635, 892
Bse8I GATNNNNATC 2 cut(s) 364, 1068
BseDI CCNNGG 4 cut(s) 175, 947, 1477, 1696
BseGI GGATG 6 cut(s) 795, 942, 1248, 1320, 1464, 1755
BseJI GATNNNNATC 2 cut(s) 364, 1068
BseLI CCNNNNNNNGG 8 cut(s) 164, 165, 377, 449, 948, 1479, 1618, 1910
BseMI GCAATG 2 cut(s) 635, 892
BseMII CTCAG 3 cut(s) 607, 1122, 1559
BseNI ACTGG 6 cut(s) 742, 1012, 1253, 1378, 1912, 1951
BseRI GAGGAG 3 cut(s) 432, 1533, 2034
BseSI GKGCMC 1 cut(s) 942
BseXI GCAGC 1 cut(s) 2148
BseYI CCCAGC 1 cut(s) 337
BshFI GGCC 2 cut(s) 940, 1557
BshNI GGYRCC 1 cut(s) 1316
BshTI ACCGGT 1 cut(s) 1604
BsiHKAI GWGCWC 1 cut(s) 2144
BsiHKCI CYCGRG 1 cut(s) 683
BsiSI CCGG 5 cut(s) 165, 822, 936, 1605, 2064
BslFI GGGAC 3 cut(s) 1001, 1183, 2094
BslI CCNNNNNNNGG 8 cut(s) 164, 165, 377, 449, 948, 1479, 1618, 1910
BsmAI GTCTC 1 cut(s) 1111
BsmFI GGGAC 3 cut(s) 1001, 1183, 2094
BsmI GAATGC 1 cut(s) 723
BsnI GGCC 2 cut(s) 940, 1557
BsoBI CYCGRG 1 cut(s) 683
Bsp119I TTCGAA 1 cut(s) 60
Bsp120I GGGCCC 1 cut(s) 938
Bsp1286I GDGCHC 3 cut(s) 942, 1755, 2144
Bsp143I GATC 7 cut(s) 87, 232, 359, 651, 1116, 2049, 2236
BspACI CCGC 3 cut(s) 371, 1965, 1968
BspANI GGCC 2 cut(s) 940, 1557
BspCNI CTCAG 3 cut(s) 606, 1121, 1558
BspLI GGNNCC 5 cut(s) 361, 671, 940, 1318, 1609
BspMAI CTGCAG 1 cut(s) 302
BspMI ACCTGC 2 cut(s) 305, 460
BspPI GGATC 6 cut(s) 82, 227, 354, 367, 646, 2244
BspT104I TTCGAA 1 cut(s) 60
BspT107I GGYRCC 1 cut(s) 1316
BspTI CTTAAG 1 cut(s) 1352
BsrDI GCAATG 2 cut(s) 635, 892
BsrFI RCCGGY 1 cut(s) 1604
BsrI ACTGG 6 cut(s) 742, 1012, 1253, 1378, 1912, 1951
BssAI RCCGGY 1 cut(s) 1604
BssECI CCNNGG 4 cut(s) 175, 947, 1477, 1696
BssMI GATC 7 cut(s) 87, 232, 359, 651, 1116, 2049, 2236
BssNAI GTATAC 1 cut(s) 2244
BssNI GRCGYC 1 cut(s) 291
BssT1I CCWWGG 3 cut(s) 175, 947, 1477
Bst1107I GTATAC 1 cut(s) 2244
Bst4CI ACNGT 3 cut(s) 989, 1836, 2277
Bst6I CTCTTC 3 cut(s) 110, 873, 2212
BstACI GRCGYC 1 cut(s) 291
BstAFI CTTAAG 1 cut(s) 1352
BstAPI GCANNNNNTGC 2 cut(s) 206, 466
BstBI TTCGAA 1 cut(s) 60
BstC8I GCNNGC 1 cut(s) 198
BstDEI CTNAG 7 cut(s) 386, 593, 712, 1043, 1108, 1545, 1714
BstF5I GGATG 6 cut(s) 795, 942, 1248, 1320, 1464, 1755
BstH2I RGCGCY 1 cut(s) 1849
BstHHI GCGC 1 cut(s) 1848
BstKTI GATC 7 cut(s) 90, 235, 362, 654, 1119, 2052, 2239
BstMAI GTCTC 1 cut(s) 1111
BstMBI GATC 7 cut(s) 87, 232, 359, 651, 1116, 2049, 2236
BstMWI GCNNNNNNNGC 4 cut(s) 206, 215, 297, 466
BstNSI RCATGY 2 cut(s) 283, 1016
BstSCI CCNGG 3 cut(s) 164, 935, 2063
BstSFI CTRYAG 1 cut(s) 298
BstSLI GKGCMC 1 cut(s) 942
BstV1I GCAGC 1 cut(s) 2148
BstX2I RGATCY 3 cut(s) 359, 651, 2236
BstXI CCANNNNNNTGG 1 cut(s) 1241
BstYI RGATCY 3 cut(s) 359, 651, 2236
BstZ17I GTATAC 1 cut(s) 2244
Bsu36I CCTNAGG 1 cut(s) 1545
BsuI GTATCC 1 cut(s) 1198
BsuRI GGCC 2 cut(s) 940, 1557
BtgZI GCGATG 1 cut(s) 296
BtsCI GGATG 6 cut(s) 795, 942, 1248, 1320, 1464, 1755
BtsI GCAGTG 1 cut(s) 108
BtsIMutI CAGTG 3 cut(s) 108, 985, 1005
BveI ACCTGC 2 cut(s) 305, 460
Cac8I GCNNGC 1 cut(s) 198
CaiI CAGNNNCTG 1 cut(s) 1946
CfoI GCGC 1 cut(s) 1848
Cfr10I RCCGGY 1 cut(s) 1604
Cfr13I GGNCC 2 cut(s) 938, 939
CseI GACGC 1 cut(s) 280
Csp6I GTAC 4 cut(s) 504, 1317, 1486, 1533
CspAI ACCGGT 1 cut(s) 1604
CspCI CAANNNNNGTGG 2 cut(s) 1315, 1350
CviAII CATG 8 cut(s) 139, 230, 255, 280, 287, 1013, 1241, 1858
CviQI GTAC 4 cut(s) 504, 1317, 1486, 1533
DdeI CTNAG 7 cut(s) 386, 593, 712, 1043, 1108, 1545, 1714
DpnI GATC 7 cut(s) 89, 234, 361, 653, 1118, 2051, 2238
DpnII GATC 7 cut(s) 87, 232, 359, 651, 1116, 2049, 2236
DraI TTTAAA 2 cut(s) 483, 1921
Eam1104I CTCTTC 3 cut(s) 110, 873, 2212
EarI CTCTTC 3 cut(s) 110, 873, 2212
Eco130I CCWWGG 3 cut(s) 175, 947, 1477
Eco24I GRGCYC 2 cut(s) 942, 1755
Eco47III AGCGCT 1 cut(s) 1847
Eco57I CTGAAG 1 cut(s) 1923
Eco81I CCTNAGG 1 cut(s) 1545
Eco88I CYCGRG 1 cut(s) 683
EcoRI GAATTC 1 cut(s) 1392
EcoT14I CCWWGG 3 cut(s) 175, 947, 1477
EcoT38I GRGCYC 2 cut(s) 942, 1755
ErhI CCWWGG 3 cut(s) 175, 947, 1477
FaeI CATG 8 cut(s) 142, 233, 258, 283, 290, 1016, 1244, 1861
FalI AAGNNNNNCTT 6 cut(s) 852, 884, 1921, 1953, 2240, 2272
FaqI GGGAC 3 cut(s) 1001, 1183, 2094
FatI CATG 8 cut(s) 138, 229, 254, 279, 286, 1012, 1240, 1857
FauNDI CATATG 1 cut(s) 2173
FbaI TGATCA 1 cut(s) 1116
FblI GTMKAC 2 cut(s) 304, 2243
Fnu4HI GCNGC 2 cut(s) 1966, 2162
FokI GGATG 6 cut(s) 782, 929, 1235, 1307, 1451, 1742
FriOI GRGCYC 2 cut(s) 942, 1755
Fsp4HI GCNGC 2 cut(s) 1966, 2162
GlaI GCGC 1 cut(s) 1847
GluI GCNGC 2 cut(s) 1966, 2162
GsaI CCCAGC 1 cut(s) 341
GsuI CTGGAG 1 cut(s) 353
HaeII RGCGCY 1 cut(s) 1849
HaeIII GGCC 2 cut(s) 940, 1557
HapII CCGG 5 cut(s) 165, 822, 936, 1605, 2064
HgaI GACGC 1 cut(s) 280
HhaI GCGC 1 cut(s) 1848
Hin1I GRCGYC 1 cut(s) 291
Hin1II CATG 8 cut(s) 142, 233, 258, 283, 290, 1016, 1244, 1861
Hin6I GCGC 1 cut(s) 1846
HinP1I GCGC 1 cut(s) 1846
HincII GTYRAC 3 cut(s) 305, 1276, 1425
HindII GTYRAC 3 cut(s) 305, 1276, 1425
HindIII AAGCTT 3 cut(s) 388, 608, 1719
HinfI GANTC 8 cut(s) 171, 263, 925, 1267, 1639, 1786, 1864, 1959
HpaI GTTAAC 1 cut(s) 1425
HpaII CCGG 5 cut(s) 165, 822, 936, 1605, 2064
HphI GGTGA 3 cut(s) 286, 532, 1103
Hpy166II GTNNAC 7 cut(s) 305, 850, 1085, 1276, 1425, 2070, 2244
Hpy188I TCNGA 3 cut(s) 772, 1111, 1527
Hpy8I GTNNAC 7 cut(s) 305, 850, 1085, 1276, 1425, 2070, 2244
Hpy99I CGWCG 1 cut(s) 309
HpyCH4III ACNGT 3 cut(s) 989, 1836, 2277
HpyCH4IV ACGT 4 cut(s) 116, 774, 1172, 1656
HpyF10VI GCNNNNNNNGC 4 cut(s) 206, 215, 297, 466
HpyF3I CTNAG 7 cut(s) 386, 593, 712, 1043, 1108, 1545, 1714
HpySE526I ACGT 4 cut(s) 116, 774, 1172, 1656
Hsp92I GRCGYC 1 cut(s) 291
Hsp92II CATG 8 cut(s) 142, 233, 258, 283, 290, 1016, 1244, 1861
HspAI GCGC 1 cut(s) 1846
KpnI GGTACC 1 cut(s) 1320
Ksp22I TGATCA 1 cut(s) 1116
KspAI GTTAAC 1 cut(s) 1425
Kzo9I GATC 7 cut(s) 87, 232, 359, 651, 1116, 2049, 2236
LmnI GCTCC 3 cut(s) 140, 334, 1895
Lsp1109I GCAGC 1 cut(s) 2148
LweI GCATC 2 cut(s) 1257, 1473
MaeII ACGT 4 cut(s) 116, 774, 1172, 1656
MaeIII GTNAC 7 cut(s) 244, 292, 322, 697, 1091, 1291, 1942
MalI GATC 7 cut(s) 89, 234, 361, 653, 1118, 2051, 2238
MboI GATC 7 cut(s) 87, 232, 359, 651, 1116, 2049, 2236
MboII GAAGA 6 cut(s) 97, 860, 1025, 1401, 1648, 2199
MfeI CAATTG 2 cut(s) 526, 1702
MflI RGATCY 3 cut(s) 359, 651, 2236
MhlI GDGCHC 3 cut(s) 942, 1755, 2144
MlyI GAGTC 3 cut(s) 165, 257, 1953
MmeI TCCRAC 2 cut(s) 1237, 1421
MroXI GAANNNNTTC 1 cut(s) 1506
MspCI CTTAAG 1 cut(s) 1352
MspI CCGG 5 cut(s) 165, 822, 936, 1605, 2064
MspR9I CCNGG 3 cut(s) 166, 937, 2065
MunI CAATTG 2 cut(s) 526, 1702
Mva1269I GAATGC 1 cut(s) 723
MwoI GCNNNNNNNGC 4 cut(s) 206, 215, 297, 466
NciI CCSGG 3 cut(s) 166, 937, 2065
NdeI CATATG 1 cut(s) 2173
NdeII GATC 7 cut(s) 87, 232, 359, 651, 1116, 2049, 2236
NlaIII CATG 8 cut(s) 142, 233, 258, 283, 290, 1016, 1244, 1861
NlaIV GGNNCC 5 cut(s) 361, 671, 940, 1318, 1609
NmeAIII GCCGAG 2 cut(s) 946, 1677
NmuCI GTSAC 4 cut(s) 244, 292, 322, 1091
NspI RCATGY 2 cut(s) 283, 1016
NspV TTCGAA 1 cut(s) 60
PaeR7I CTCGAG 1 cut(s) 683
PaqCI CACCTGC 1 cut(s) 305
PciI ACATGT 1 cut(s) 1012
PcsI WCGNNNNNNNCGW 1 cut(s) 1704
PctI GAATGC 1 cut(s) 723
PdmI GAANNNNTTC 1 cut(s) 1506
PfeI GAWTC 5 cut(s) 925, 1267, 1639, 1786, 1864
PflMI CCANNNNNTGG 2 cut(s) 948, 1910
PinAI ACCGGT 1 cut(s) 1604
PkrI GCNGC 2 cut(s) 1967, 2163
PleI GAGTC 3 cut(s) 165, 257, 1953
PpsI GAGTC 3 cut(s) 165, 257, 1953
PscI ACATGT 1 cut(s) 1012
PsiI TTATAA 1 cut(s) 813
Psp1406I AACGTT 2 cut(s) 116, 1656
PspFI CCCAGC 1 cut(s) 337
PspN4I GGNNCC 5 cut(s) 361, 671, 940, 1318, 1609
PspOMI GGGCCC 1 cut(s) 938
PspPI GGNCC 2 cut(s) 938, 939
PstI CTGCAG 1 cut(s) 302
PstNI CAGNNNCTG 1 cut(s) 1946
PsuI RGATCY 3 cut(s) 359, 651, 2236
RsaI GTAC 4 cut(s) 505, 1318, 1487, 1534
RsaNI GTAC 4 cut(s) 504, 1317, 1486, 1533
SalI GTCGAC 1 cut(s) 303
SatI GCNGC 2 cut(s) 1966, 2162
Sau3AI GATC 7 cut(s) 87, 232, 359, 651, 1116, 2049, 2236
Sau96I GGNCC 2 cut(s) 938, 939
SchI GAGTC 3 cut(s) 165, 257, 1953
ScrFI CCNGG 3 cut(s) 166, 937, 2065
SduI GDGCHC 3 cut(s) 942, 1755, 2144
SfaNI GCATC 2 cut(s) 1257, 1473
SfcI CTRYAG 1 cut(s) 298
Sfr274I CTCGAG 1 cut(s) 683
SfuI TTCGAA 1 cut(s) 60
SlaI CTCGAG 1 cut(s) 683
SmlI CTYRAG 5 cut(s) 410, 683, 880, 1096, 1352
SmoI CTYRAG 5 cut(s) 410, 683, 880, 1096, 1352
SsiI CCGC 3 cut(s) 371, 1965, 1968
SspI AATATT 1 cut(s) 1050
StyD4I CCNGG 3 cut(s) 164, 935, 2063
StyI CCWWGG 3 cut(s) 175, 947, 1477
TaaI ACNGT 3 cut(s) 989, 1836, 2277
TaiI ACGT 4 cut(s) 119, 777, 1175, 1659
TaqI TCGA 7 cut(s) 60, 304, 684, 1138, 1789, 1842, 1984
TauI GCSGC 1 cut(s) 1968
TfiI GAWTC 5 cut(s) 925, 1267, 1639, 1786, 1864
TscAI CASTG 3 cut(s) 115, 992, 1012
TseFI GTSAC 4 cut(s) 244, 292, 322, 1091
TseI GCWGC 1 cut(s) 2161
Tsp45I GTSAC 4 cut(s) 244, 292, 322, 1091
TspGWI ACGGA 2 cut(s) 203, 1310
TspRI CASTG 3 cut(s) 115, 992, 1012
Van91I CCANNNNNTGG 2 cut(s) 948, 1910
Vha464I CTTAAG 1 cut(s) 1352
XapI RAATTY 5 cut(s) 454, 579, 855, 1392, 1827
XbaI TCTAGA 2 cut(s) 1207, 1453
XceI RCATGY 2 cut(s) 283, 1016
XcmI CCANNNNNNNNNTGG 1 cut(s) 1160
XhoI CTCGAG 1 cut(s) 683
XmaJI CCTAGG 1 cut(s) 1477
XmiI GTMKAC 2 cut(s) 304, 2243
XmnI GAANNNNTTC 1 cut(s) 1506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.