Rorug01G0247500
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
35488426 .. 35489794
1369 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0247500.1

Sequence Viewer

Length: 1083 bp
ATGACATGCAGACACACCGCCAGGCGGGCTACAGCCCCAACGTCGGACCACCTCCACATCGCCGCCGACGCGCCGCCACGCGCCGCGCCAAGATGGCATCAGAAGCTTCTGAAACTGGGAACTGAAGCATATCAGTCCCACATCGAAAACAAAGAGCAGATCAACCTCTTCATCACCTATAAAAGGTCCTCTCCTCTCTCCTCATTAATTACGCATTCAATACTTACCTACTGTTACTTTGTCAACATAAATACATTGACTAACTTAGGCATCGGAGAGTGGAAGACCGCCCAACGCGGTCTCCCTCTGACGCCCTTTGTATTTTACTTGACAGGTAGCGGAGGCTTTGAGAACGTCACAAGTATCGATCCGCCCACCGGATCAGCTACCGCCGAACTTTTAGACATTAACATTGCTTTTGACCTACGTAAGGACCGCAACAAAGTCTTGAAGGGAGGACCATGGCGTTTTCATCAGGCTCCGGTTGTGCTTCAGGAGTATGATGGCATCACGCCAGTTGCAGAAGTGGATCTGACCTTACTCTTCTTCTGGGTTCGGATTAGTAATATATCGCAGCTGTTTGAGGAACCAGACATAATCCGAAACATTGCTTCGGTGGCGGGTAAGTTCCTTGAATTGGATGATAAGCTTTTTGCAAATACGGGCAAGGGTGTTCAAACACCTATTCTCCCATCTATTTGCAGGGCTCTCTTCCAACCCAAGGAAGCAGGTAGGGCATGCAAACCGGTCATACTGCGTGACAGAACTCTGGATCCGAAAGAAAAGGAGGAAGAGGTACACCCCTTGGCGCTGGCATTGCTTGCAGCTCCGGACTCGGAGGTACCAAACCCTATACATGCAGGTACAACTGCACACATGGAGCTGGAGAAAGAGTTGGTGCTTGAACATGCTAGCAATACCCAAGAGCTAAATGCTTCTGAGGATAAAAGTGAAACTGCACAGATTAATGAAGGCAAAAAAGAGCATAGAGGTGACAAGCGTCAGCTTCCTCCCTCGAAGCTAAAGTTCCTGCTGCCAGAGTTATTCAAACCGCTTCTCCATGATATTCAAGCAAAGAAGTAG

Protein Analysis

360

Amino Acids

40.25

Weight (kDa)

6.9

Isoelectric Point (pI)

47.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 719, 851
Acc65I GGTACC 1 cut(s) 841
AccB1I GGYRCC 1 cut(s) 841
AccII CGCG 4 cut(s) 71, 81, 86, 297
AccIII TCCGGA 1 cut(s) 829
AclWI GGATC 5 cut(s) 362, 388, 537, 767, 780
AcuI CTGAAG 2 cut(s) 144, 476
AcyI GRCGYC 1 cut(s) 311
AfaI GTAC 3 cut(s) 798, 843, 865
AfiI CCNNNNNNNGG 7 cut(s) 24, 43, 183, 377, 430, 637, 721
AgeI ACCGGT 1 cut(s) 745
AgsI TTSAA 7 cut(s) 219, 451, 635, 677, 905, 1048, 1070
AjnI CCWGG 1 cut(s) 20
AloI GAACNNNNNNTCC 2 cut(s) 757, 789
AluBI AGCT 9 cut(s) 106, 386, 577, 649, 827, 883, 928, 1006, 1021
AluI AGCT 9 cut(s) 106, 386, 577, 649, 827, 883, 928, 1006, 1021
Alw26I GTCTC 1 cut(s) 305
AlwI GGATC 5 cut(s) 362, 388, 537, 767, 780
Aor13HI TCCGGA 1 cut(s) 829
ApeKI GCWGC 3 cut(s) 574, 824, 1033
AseI ATTAAT 2 cut(s) 206, 966
AsiGI ACCGGT 1 cut(s) 745
Asp718I GGTACC 1 cut(s) 841
AspLEI GCGC 4 cut(s) 73, 83, 88, 811
AspS9I GGNCC 4 cut(s) 46, 186, 433, 458
AsuHPI GGTGA 2 cut(s) 166, 1004
AsuNHI GCTAGC 1 cut(s) 911
AvaII GGWCC 4 cut(s) 46, 186, 433, 458
BamHI GGATCC 1 cut(s) 772
BanI GGYRCC 1 cut(s) 841
BanII GRGCYC 1 cut(s) 709
BbsI GAAGAC 1 cut(s) 290
BbvI GCAGC 3 cut(s) 586, 836, 1020
BccI CCATC 3 cut(s) 87, 497, 700
BciT130I CCWGG 1 cut(s) 22
BcoDI GTCTC 1 cut(s) 305
BfaI CTAG 1 cut(s) 912
BfmI CTRYAG 1 cut(s) 30
BfoI RGCGCY 1 cut(s) 812
BfuAI ACCTGC 2 cut(s) 719, 851
BglI GCCNNNNNGGC 2 cut(s) 26, 94
BisI GCNGC 6 cut(s) 63, 74, 84, 575, 825, 1034
BlsI GCNGC 6 cut(s) 64, 75, 85, 576, 826, 1035
Bme1390I CCNGG 1 cut(s) 22
Bme18I GGWCC 4 cut(s) 46, 186, 433, 458
BmgT120I GGNCC 4 cut(s) 46, 186, 433, 458
BmiI GGNNCC 4 cut(s) 480, 588, 774, 843
BmrFI CCNGG 1 cut(s) 22
BmrI ACTGGG 1 cut(s) 125
BmsI GCATC 3 cut(s) 106, 279, 516
BmtI GCTAGC 1 cut(s) 915
BmuI ACTGGG 1 cut(s) 125
BoxI GACNNNNGTC 1 cut(s) 999
BpiI GAAGAC 1 cut(s) 290
BpmI CTGGAG 1 cut(s) 905
Bsa29I ATCGAT 1 cut(s) 366
BsaAI YACGTR 1 cut(s) 428
BsaHI GRCGYC 1 cut(s) 311
BsaI GGTCTC 1 cut(s) 305
BsaJI CCNNGG 3 cut(s) 461, 720, 804
BsaWI WCCGGW 4 cut(s) 377, 481, 745, 829
BsaXI ACNNNNNCTCC 8 cut(s) 285, 315, 672, 702, 878, 908, 1041, 1071
Bsc4I CCNNNNNNNGG 7 cut(s) 24, 43, 183, 377, 430, 637, 721
Bse118I RCCGGY 1 cut(s) 745
Bse1I ACTGG 2 cut(s) 120, 515
Bse3DI GCAATG 3 cut(s) 411, 606, 815
BseAI TCCGGA 1 cut(s) 829
BseBI CCWGG 1 cut(s) 22
BseCI ATCGAT 1 cut(s) 366
BseDI CCNNGG 3 cut(s) 461, 720, 804
BseGI GGATG 1 cut(s) 646
BseLI CCNNNNNNNGG 7 cut(s) 24, 43, 183, 377, 430, 637, 721
BseMI GCAATG 3 cut(s) 411, 606, 815
BseMII CTCAG 1 cut(s) 930
BseNI ACTGG 2 cut(s) 120, 515
BseRI GAGGAG 2 cut(s) 183, 190
BseXI GCAGC 3 cut(s) 586, 836, 1020
BsgI GTGCAG 2 cut(s) 855, 942
Bsh1236I CGCG 4 cut(s) 71, 81, 86, 297
BshNI GGYRCC 1 cut(s) 841
BshTI ACCGGT 1 cut(s) 745
BshVI ATCGAT 1 cut(s) 366
BsiSI CCGG 4 cut(s) 378, 482, 746, 830
BslFI GGGAC 1 cut(s) 121
BslI CCNNNNNNNGG 7 cut(s) 24, 43, 183, 377, 430, 637, 721
BsmAI GTCTC 1 cut(s) 305
BsmFI GGGAC 1 cut(s) 121
BsmI GAATGC 1 cut(s) 214
Bso31I GGTCTC 1 cut(s) 305
Bsp1286I GDGCHC 1 cut(s) 709
Bsp13I TCCGGA 1 cut(s) 829
Bsp143I GATC 5 cut(s) 159, 367, 380, 529, 772
Bsp19I CCATGG 1 cut(s) 461
BspCNI CTCAG 1 cut(s) 931
BspDI ATCGAT 1 cut(s) 366
BspEI TCCGGA 1 cut(s) 829
BspFNI CGCG 4 cut(s) 71, 81, 86, 297
BspLI GGNNCC 4 cut(s) 480, 588, 774, 843
BspMI ACCTGC 2 cut(s) 719, 851
BspOI GCTAGC 1 cut(s) 915
BspPI GGATC 5 cut(s) 362, 388, 537, 767, 780
BspT107I GGYRCC 1 cut(s) 841
BspTNI GGTCTC 1 cut(s) 305
BsrDI GCAATG 3 cut(s) 411, 606, 815
BsrFI RCCGGY 1 cut(s) 745
BsrI ACTGG 2 cut(s) 120, 515
BssAI RCCGGY 1 cut(s) 745
BssECI CCNNGG 3 cut(s) 461, 720, 804
BssMI GATC 5 cut(s) 159, 367, 380, 529, 772
BssNI GRCGYC 1 cut(s) 311
BssT1I CCWWGG 3 cut(s) 461, 720, 804
Bst2UI CCWGG 1 cut(s) 22
Bst4CI ACNGT 1 cut(s) 233
Bst6I CTCTTC 4 cut(s) 173, 548, 716, 786
BstACI GRCGYC 1 cut(s) 311
BstAPI GCANNNNNTGC 1 cut(s) 821
BstBAI YACGTR 1 cut(s) 428
BstC8I GCNNGC 5 cut(s) 27, 739, 813, 822, 913
BstDEI CTNAG 2 cut(s) 265, 939
BstDSI CCRYGG 1 cut(s) 461
BstENI CCTNNNNNAGG 2 cut(s) 181, 428
BstF5I GGATG 1 cut(s) 646
BstFNI CGCG 4 cut(s) 71, 81, 86, 297
BstH2I RGCGCY 1 cut(s) 812
BstHHI GCGC 4 cut(s) 73, 83, 88, 811
BstKTI GATC 5 cut(s) 162, 370, 383, 532, 775
BstMAI GTCTC 1 cut(s) 305
BstMBI GATC 5 cut(s) 159, 367, 380, 529, 772
BstMWI GCNNNNNNNGC 8 cut(s) 26, 68, 94, 103, 617, 734, 817, 821
BstNI CCWGG 1 cut(s) 22
BstNSI RCATGY 4 cut(s) 9, 741, 860, 911
BstPAI GACNNNNGTC 1 cut(s) 999
BstSCI CCNGG 1 cut(s) 20
BstSFI CTRYAG 1 cut(s) 30
BstSNI TACGTA 1 cut(s) 428
BstUI CGCG 4 cut(s) 71, 81, 86, 297
BstV1I GCAGC 3 cut(s) 586, 836, 1020
BstV2I GAAGAC 1 cut(s) 290
BstX2I RGATCY 2 cut(s) 529, 772
BstYI RGATCY 2 cut(s) 529, 772
Bsu15I ATCGAT 1 cut(s) 366
BsuTUI ATCGAT 1 cut(s) 366
BtgI CCRYGG 1 cut(s) 461
BtgZI GCGATG 1 cut(s) 43
BtsCI GGATG 1 cut(s) 646
BveI ACCTGC 2 cut(s) 719, 851
Cac8I GCNNGC 5 cut(s) 27, 739, 813, 822, 913
CfoI GCGC 4 cut(s) 73, 83, 88, 811
Cfr10I RCCGGY 1 cut(s) 745
Cfr13I GGNCC 4 cut(s) 46, 186, 433, 458
ClaI ATCGAT 1 cut(s) 366
CseI GACGC 3 cut(s) 77, 319, 989
Csp6I GTAC 3 cut(s) 797, 842, 864
CspAI ACCGGT 1 cut(s) 745
CviAII CATG 7 cut(s) 6, 462, 738, 857, 877, 908, 1061
CviQI GTAC 3 cut(s) 797, 842, 864
DdeI CTNAG 2 cut(s) 265, 939
DpnI GATC 5 cut(s) 161, 369, 382, 531, 774
DpnII GATC 5 cut(s) 159, 367, 380, 529, 772
Eam1104I CTCTTC 4 cut(s) 173, 548, 716, 786
EarI CTCTTC 4 cut(s) 173, 548, 716, 786
EciI GGCGGA 1 cut(s) 360
Eco105I TACGTA 1 cut(s) 428
Eco130I CCWWGG 3 cut(s) 461, 720, 804
Eco24I GRGCYC 1 cut(s) 709
Eco31I GGTCTC 1 cut(s) 305
Eco47I GGWCC 4 cut(s) 46, 186, 433, 458
Eco57I CTGAAG 2 cut(s) 144, 476
EcoNI CCTNNNNNAGG 2 cut(s) 181, 428
EcoO109I RGGNCCY 1 cut(s) 186
EcoRII CCWGG 1 cut(s) 20
EcoT14I CCWWGG 3 cut(s) 461, 720, 804
EcoT38I GRGCYC 1 cut(s) 709
ErhI CCWWGG 3 cut(s) 461, 720, 804
FaeI CATG 7 cut(s) 9, 465, 741, 860, 880, 911, 1064
FaqI GGGAC 1 cut(s) 121
FatI CATG 7 cut(s) 5, 461, 737, 856, 876, 907, 1060
FauI CCCGC 2 cut(s) 18, 613
Fnu4HI GCNGC 6 cut(s) 63, 74, 84, 575, 825, 1034
FokI GGATG 1 cut(s) 653
FriOI GRGCYC 1 cut(s) 709
Fsp4HI GCNGC 6 cut(s) 63, 74, 84, 575, 825, 1034
FspBI CTAG 1 cut(s) 912
GlaI GCGC 4 cut(s) 72, 82, 87, 810
GluI GCNGC 6 cut(s) 63, 74, 84, 575, 825, 1034
GsuI CTGGAG 1 cut(s) 905
HaeII RGCGCY 1 cut(s) 812
HapII CCGG 4 cut(s) 378, 482, 746, 830
HgaI GACGC 3 cut(s) 77, 319, 989
HhaI GCGC 4 cut(s) 73, 83, 88, 811
Hin1I GRCGYC 1 cut(s) 311
Hin1II CATG 7 cut(s) 9, 465, 741, 860, 880, 911, 1064
Hin6I GCGC 4 cut(s) 71, 81, 86, 809
HinP1I GCGC 4 cut(s) 71, 81, 86, 809
HincII GTYRAC 1 cut(s) 244
HindII GTYRAC 1 cut(s) 244
HindIII AAGCTT 2 cut(s) 104, 647
HinfI GANTC 1 cut(s) 833
HpaII CCGG 4 cut(s) 378, 482, 746, 830
HphI GGTGA 2 cut(s) 166, 1004
Hpy166II GTNNAC 2 cut(s) 244, 799
Hpy188III TCNNGA 4 cut(s) 448, 494, 770, 830
Hpy8I GTNNAC 2 cut(s) 244, 799
Hpy99I CGWCG 2 cut(s) 46, 71
HpyAV CCTTC 2 cut(s) 445, 965
HpyCH4III ACNGT 1 cut(s) 233
HpyCH4IV ACGT 3 cut(s) 41, 354, 427
HpyCH4V TGCA 9 cut(s) 9, 521, 656, 702, 741, 824, 860, 872, 959
HpyF10VI GCNNNNNNNGC 8 cut(s) 26, 68, 94, 103, 617, 734, 817, 821
HpyF3I CTNAG 2 cut(s) 265, 939
HpySE526I ACGT 3 cut(s) 41, 354, 427
Hsp92I GRCGYC 1 cut(s) 311
Hsp92II CATG 7 cut(s) 9, 465, 741, 860, 880, 911, 1064
HspAI GCGC 4 cut(s) 71, 81, 86, 809
Kpn2I TCCGGA 1 cut(s) 829
KpnI GGTACC 1 cut(s) 845
Kzo9I GATC 5 cut(s) 159, 367, 380, 529, 772
LmnI GCTCC 3 cut(s) 484, 832, 880
Lsp1109I GCAGC 3 cut(s) 586, 836, 1020
LweI GCATC 3 cut(s) 106, 279, 516
MaeI CTAG 1 cut(s) 912
MaeII ACGT 3 cut(s) 41, 354, 427
MaeIII GTNAC 4 cut(s) 233, 355, 758, 992
MalI GATC 5 cut(s) 161, 369, 382, 531, 774
MboI GATC 5 cut(s) 159, 367, 380, 529, 772
MboII GAAGA 6 cut(s) 160, 295, 535, 538, 703, 803
MflI RGATCY 2 cut(s) 529, 772
MhlI GDGCHC 1 cut(s) 709
MluCI AATT 2 cut(s) 207, 635
MlyI GAGTC 1 cut(s) 827
MmeI TCCRAC 2 cut(s) 24, 739
MroI TCCGGA 1 cut(s) 829
MseI TTAA 3 cut(s) 206, 408, 966
MslI CAYNNNNRTG 1 cut(s) 990
MspA1I CMGCKG 1 cut(s) 577
MspI CCGG 4 cut(s) 378, 482, 746, 830
MspR9I CCNGG 1 cut(s) 22
MteI GCGCNGCGC 1 cut(s) 84
Mva1269I GAATGC 1 cut(s) 214
MvaI CCWGG 1 cut(s) 22
MvnI CGCG 4 cut(s) 71, 81, 86, 297
MwoI GCNNNNNNNGC 8 cut(s) 26, 68, 94, 103, 617, 734, 817, 821
NcoI CCATGG 1 cut(s) 461
NdeII GATC 5 cut(s) 159, 367, 380, 529, 772
NheI GCTAGC 1 cut(s) 911
NlaIII CATG 7 cut(s) 9, 465, 741, 860, 880, 911, 1064
NlaIV GGNNCC 4 cut(s) 480, 588, 774, 843
NmuCI GTSAC 3 cut(s) 355, 758, 992
NspI RCATGY 4 cut(s) 9, 741, 860, 911
PaeI GCATGC 1 cut(s) 741
PctI GAATGC 1 cut(s) 214
PinAI ACCGGT 1 cut(s) 745
PkrI GCNGC 6 cut(s) 64, 75, 85, 576, 826, 1035
PleI GAGTC 1 cut(s) 827
PpsI GAGTC 1 cut(s) 827
Ppu21I YACGTR 1 cut(s) 428
PpuMI RGGWCCY 1 cut(s) 186
PshAI GACNNNNGTC 1 cut(s) 999
PshBI ATTAAT 2 cut(s) 206, 966
Psp5II RGGWCCY 1 cut(s) 186
Psp6I CCWGG 1 cut(s) 20
PspGI CCWGG 1 cut(s) 20
PspN4I GGNNCC 4 cut(s) 480, 588, 774, 843
PspPI GGNCC 4 cut(s) 46, 186, 433, 458
PspPPI RGGWCCY 1 cut(s) 186
PsuI RGATCY 2 cut(s) 529, 772
PvuII CAGCTG 1 cut(s) 577
RsaI GTAC 3 cut(s) 798, 843, 865
RsaNI GTAC 3 cut(s) 797, 842, 864
RseI CAYNNNNRTG 1 cut(s) 990
SaqAI TTAA 3 cut(s) 206, 408, 966
SatI GCNGC 6 cut(s) 63, 74, 84, 575, 825, 1034
Sau3AI GATC 5 cut(s) 159, 367, 380, 529, 772
Sau96I GGNCC 4 cut(s) 46, 186, 433, 458
SchI GAGTC 1 cut(s) 827
ScrFI CCNGG 1 cut(s) 22
SduI GDGCHC 1 cut(s) 709
SfaNI GCATC 3 cut(s) 106, 279, 516
SfcI CTRYAG 1 cut(s) 30
SinI GGWCC 4 cut(s) 46, 186, 433, 458
SmiMI CAYNNNNRTG 1 cut(s) 990
SnaBI TACGTA 1 cut(s) 428
SphI GCATGC 1 cut(s) 741
Sse9I AATT 2 cut(s) 207, 635
SspMI CTAG 1 cut(s) 912
StyD4I CCNGG 1 cut(s) 20
StyI CCWWGG 3 cut(s) 461, 720, 804
TaaI ACNGT 1 cut(s) 233
TaiI ACGT 3 cut(s) 44, 357, 430
TaqI TCGA 3 cut(s) 144, 366, 1016
TasI AATT 2 cut(s) 207, 635
TauI GCSGC 3 cut(s) 65, 76, 86
Tru1I TTAA 3 cut(s) 206, 408, 966
Tru9I TTAA 3 cut(s) 206, 408, 966
TseFI GTSAC 3 cut(s) 355, 758, 992
TseI GCWGC 3 cut(s) 574, 824, 1033
Tsp45I GTSAC 3 cut(s) 355, 758, 992
TspDTI ATGAA 3 cut(s) 160, 461, 984
VpaK11BI GGWCC 4 cut(s) 46, 186, 433, 458
VspI ATTAAT 2 cut(s) 206, 966
XagI CCTNNNNNAGG 2 cut(s) 181, 428
XceI RCATGY 4 cut(s) 9, 741, 860, 911
XspI CTAG 1 cut(s) 912
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.