MD07G1218900.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
29634872 .. 29638076
3205 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1218900.v1.1.491

Sequence Viewer

Length: 3009 bp
ATGGAGTTGTCAAGTATTCATATTAGCATTTGGTTTATTTTCATGCAACCACTCTTTCTTCTCTTTCTTTTTAGCTTTGCCTCCTCCTCACATTTAGCGGGAAACGAGGTGGATAGGCTTTCCTTGCTTGCCTTTCAAGCTGAAATCGTGAACGATACCTTGGGCATCCTTAGCTCTTGGAATGAATCGCTCCACTTCTGTCATTGGCCAGGCATTACTTGTGGCCGCAAACACCAGAGGGTTACAGTGCTCAACCTCCAATCAAGCGGGCTGGCCGGCCACCTATCTCCCCACATTGGAAACTTGAGCTTTCTGAGGATTTTACGCCTCCAAAACAATGGCTTCAGCCACACCATTCCTCCAGAAATTGGTCGTTTGTTTCGCTTGGAAACACTAGTCCTTGATAACAACTCCTTCAGTGGTCATATCCCATTCAACATATCACGTTGCTCTAACCTCCAATACCTTTACTTATTTCGCAACACTCTTAGTGGCGAACTTCCAACTGAAATTACATCATTGTCCAAGCTTCAGGAACTTGATTTTGGCAGGAACAATTTTTATGGGAAAATCCCACCTTCTTTTGGGAATTTTTCTTCTCTTCAAGTGCTATATGCATCTGAAAACAATCTGCATGGAGGTATTCCAAAAAGGTTTGGCCAGTTGAGAAGCTTAATGATTTTTTCATTGGCTTCAAATTATTTGAATGGTACCATCCCTCTCTCTATATACAACCTCTCGTCAATTAAAGAGATTTATATGTTTCAAAACAACCTTCATGGAACTCTTCTTCCTGGCTTGGGCCACACTATATTTCCAAACCTCGAAACGTTTGGTTTCCATACCAACCAATTCACTGGACCAGTACCAGCTTCAATCTCCAATGCCTCAAACCTTTCACTATTTTCTATCGCAGGCAATAAGTTTACTGGGAAAGTGCCTAGTCTGGCACGTCTGTCAAATTTGGATTTGCTTGAACTTGATCAAAACAATCTTGGAAATAATGAGGTAGGTGACTTAGATTTCATCTCTTCTCTTGTTAATTGCACCAATTTAGAAGTTTTATCTGTCGGCCTCAATAATTTTGGAGGAGTGCTGCCTGAATCTATCAGCAATCTCTCAACAAAGCTCACGGAAATATCTTTTCATGAGAATCAGATATGCGGAAACATTCCCATCGGGGTTGGAAATCTTATCAACGTGGAGAGACTAGGCTTTTTTGCGAATTTATTGGCAGGCACTATACCGAGTTCAATAGGTAAACTGAATAAGCTTTACGACCTATATCTAGATTCCAATGAATTGTCAGGTGATGTTCCATCATCTCTAGGAAATCTAACTTCATTAAGCAGATTGACTCTCAACTCAAACAAATTAAATGGAAGCATACCACAAAGTCTCGGAGACTGTATGTTTATGTTAGAGTTGGATCTTTCCCACAACAATCTTAGCGGTCCAATTCCAAAGCAAGTCATCAGTTTACCTGTTTACTTGAATCTATCTGGAAACCAACTTACTCAATCCATTCCCTTGGAAGTAGGTAACTTAGAGCATCTTGTTTTCTTGGATGTTTCTGAAAACAAGTTATCTGGTGAGATTCCACAAAGCTTAGGGAGTTGCACAAGTTTGATGACTCTGTCTCTGAGAGAAAATTTATTGCAGGGGACAATTCATAAATCCTTGAGCTCTTTGAGAGGAATTGAAGATTTTGACCTCTCTCGCAACAACTTGATTGGCATAATTCCCAACTACTTGGGGAGTTTCCCCTTCTTGCAAAATTTGAACCTTTCATTTAACGATTTTGAAGGTGCAGTACCAAACCAAGGAGTTTTTAAGAATGCAAGTGCGGTATATGTTGTGGGAAACACACGGCTTTGTGGAGGTATACCTCACTTAAGATTGCCTAAATGCATCTCTACGCAATCCAAGCGAGCGTTATCTCCTAAGCTGAACTTAATTATCTCAGTTTCATGTGGGGTTGTCGGCTTGGTCTTGGTGTCGTTACTTGCGCTTCTTTATCGATCAAGAAAGGCTAGAGCGCTTAAGTCAACTGCAGGATCATCACTGGGGGTTTCACTCTTGAAACTGTCCTATGGAGATCTCCTCAAAGCAACTGATGGTTTCTCTGCTTCGAATCTAATTGGTGCTGGAAGTTTCGGGTTGGTGTACAAGGGAGTTCTTAATCAACATGAAGAAAGAAATGTTGCGGTGAAACTACTGACTGCTTGTTCAAGCATTGATTTTCAAGGAAACAATTTCAAAGCCCTGGTGTATGAGTTCATGGTGAATGGAAGCCTAGATGAGTGGCTACACATATCAGCTCAAGGAGTAGATAGGCTAGCCAATTTTCCAAAGAATCTGAATCTCACTCAAAGAGTTAACATTGCCATCGATGTAGCGTGTGCTCTGGATTATTTGCACAACCGCTCCCACATGCCAATAGTTCATTGTGATATAAAGCCCAGCAACATTTTGTTAGACAGTGACATGACTGCTTGTGTTGGTGATTTCGGTTTAGCAAGGTACCTCAGGGATGATTCTTGCCCATCTCATTTGCACAATAGCAGTTCCAATGTCATAAAAGGCACCATAGGCTATACTCCACCAGGCGAGGTGTCAACATATGGCGACGTGTATAGCTACGGAATACTGTTGTTGGAGATGTTAACTGGCAAAAGGCCAACAGATGACATGTTTAAAGGTGGTATGGACCTGCACAATTTTGTTATGATGGCTCTACCAGAACGTGTGGAAGAAATATGTGATCCACTACTTGTTCAAATAGAAGAAAGCAACAGCAGTACTAATCCCAGAAGTAATAGAGGGAATCATTCCCCAAATGATCGAATAAAAAGGGTTGTGGAGTGCTTGACTTCCATTGCAAGAGTAGGAGTTGCTTGTTCTGTAGCGATGTCAAGAGAGCGAAAAGACATGAGCAATGTGGTAGCTGAATTGAGTCTAATAAGGGATGTGCTAACTGGAACTAGGATGCCTAGAGAGTATCCGTGA

Protein Analysis

1003

Amino Acids

109.69

Weight (kDa)

6.46

Isoelectric Point (pI)

39.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 38 - 74 6.3e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 79 - 181 4.7e-11 Leucine-rich repeat region
LRR_14 PF23598 147 - 232 1.6e-08 Leucine-rich repeat region
LRR_14 PF23598 497 - 600 1.3e-07 Leucine-rich repeat region
LRR_8 PF13855 542 - 601 4.9e-06 Leucine rich repeat
Pkinase PF00069 752 - 896 1.1e-20 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 755 - 899 1.7e-21 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2721
Acc65I GGTACC 2 cut(s) 710, 2523
AccB1I GGYRCC 3 cut(s) 710, 2523, 2585
AccB7I CCANNNNNTGG 1 cut(s) 368
AccBSI CCGCTC 1 cut(s) 2427
AccI GTMKAC 1 cut(s) 1885
AciI CCGC 8 cut(s) 98, 226, 267, 1164, 1452, 1847, 2207, 2425
AclI AACGTT 1 cut(s) 830
AclWI GGATC 3 cut(s) 1437, 2065, 2759
AcoI YGGCCR 5 cut(s) 206, 223, 273, 277, 658
AcsI RAATTY 5 cut(s) 589, 961, 1225, 1651, 1777
AcuI CTGAAG 3 cut(s) 328, 400, 515
AfaI GTAC 6 cut(s) 712, 867, 1815, 2168, 2525, 2803
AfeI AGCGCT 1 cut(s) 2040
AfiI CCNNNNNNNGG 5 cut(s) 296, 368, 584, 800, 1823
AflII CTTAAG 2 cut(s) 1894, 2042
AflIII ACRYGT 3 cut(s) 2631, 2691, 2746
AhlI ACTAGT 1 cut(s) 394
AjiI CACGTC 2 cut(s) 953, 2632
AjnI CCWGG 4 cut(s) 208, 793, 2265, 2605
AjuI GAANNNNNNNTTGG 4 cut(s) 143, 175, 528, 560
AloI GAACNNNNNNTCC 2 cut(s) 775, 807
Alw21I GWGCWC 3 cut(s) 252, 1688, 2407
Alw26I GTCTC 4 cut(s) 1201, 1398, 1403, 1644
AlwI GGATC 3 cut(s) 1437, 2065, 2759
Aor51HI AGCGCT 1 cut(s) 2040
AoxI GGCC 8 cut(s) 206, 223, 273, 277, 658, 802, 1072, 2678
ApeKI GCWGC 1 cut(s) 1096
ApoI RAATTY 5 cut(s) 589, 961, 1225, 1651, 1777
Asp718I GGTACC 2 cut(s) 710, 2523
AspLEI GCGC 2 cut(s) 2011, 2041
AspS9I GGNCC 4 cut(s) 802, 860, 1454, 2710
AsuHPI GGTGA 6 cut(s) 1025, 1322, 1604, 2221, 2296, 2516
AsuII TTCGAA 1 cut(s) 2132
AsuNHI GCTAGC 1 cut(s) 2338
AvaII GGWCC 3 cut(s) 860, 1454, 2710
AxyI CCTNAGG 1 cut(s) 2528
BalI TGGCCA 2 cut(s) 208, 660
BanI GGYRCC 3 cut(s) 710, 2523, 2585
BanII GRGCYC 1 cut(s) 1688
BarI GAAGNNNNNNTAC 2 cut(s) 1797, 1829
Bbv12I GWGCWC 3 cut(s) 252, 1688, 2407
BbvI GCAGC 1 cut(s) 1083
BccI CCATC 7 cut(s) 722, 1184, 1327, 2111, 2396, 2554, 2725
BceAI ACGGC 1 cut(s) 1886
BciT130I CCWGG 4 cut(s) 210, 795, 2267, 2607
BclI TGATCA 1 cut(s) 982
BcoDI GTCTC 4 cut(s) 1201, 1398, 1403, 1644
BcuI ACTAGT 1 cut(s) 394
BfmI CTRYAG 2 cut(s) 2052, 2904
BfoI RGCGCY 1 cut(s) 2042
BfrI CTTAAG 2 cut(s) 1894, 2042
BfuAI ACCTGC 1 cut(s) 2721
BglII AGATCT 1 cut(s) 2098
BisI GCNGC 2 cut(s) 226, 1097
BlsI GCNGC 2 cut(s) 227, 1098
BmcAI AGTACT 1 cut(s) 2803
Bme1390I CCNGG 4 cut(s) 210, 795, 2267, 2607
Bme18I GGWCC 3 cut(s) 860, 1454, 2710
BmgBI CACGTC 2 cut(s) 953, 2632
BmgT120I GGNCC 4 cut(s) 802, 860, 1454, 2710
BmiI GGNNCC 3 cut(s) 712, 2525, 2587
BmrFI CCNGG 4 cut(s) 210, 795, 2267, 2607
BmrI ACTGGG 2 cut(s) 939, 2075
BmsI GCATC 5 cut(s) 174, 626, 1561, 1920, 2979
BmtI GCTAGC 1 cut(s) 2342
BmuI ACTGGG 2 cut(s) 939, 2075
BplI GAGNNNNNCTC 2 cut(s) 2088, 2120
BpmI CTGGAG 1 cut(s) 345
Bpu10I CCTNAGC 3 cut(s) 170, 1609, 1944
Bpu14I TTCGAA 1 cut(s) 2132
BpuEI CTTGAG 3 cut(s) 325, 1702, 2307
Bsa29I ATCGAT 2 cut(s) 2020, 2391
BsaJI CCNNGG 4 cut(s) 159, 1530, 1822, 2265
BsaXI ACNNNNNCTCC 4 cut(s) 343, 373, 2411, 2441
Bsc4I CCNNNNNNNGG 5 cut(s) 296, 368, 584, 800, 1823
Bse118I RCCGGY 1 cut(s) 275
Bse1I ACTGG 7 cut(s) 661, 862, 863, 934, 2070, 2674, 2983
Bse21I CCTNAGG 1 cut(s) 2528
Bse3DI GCAATG 3 cut(s) 2382, 2877, 2944
BseBI CCWGG 4 cut(s) 210, 795, 2267, 2607
BseCI ATCGAT 2 cut(s) 2020, 2391
BseDI CCNNGG 4 cut(s) 159, 1530, 1822, 2265
BseGI GGATG 6 cut(s) 165, 714, 1573, 2539, 2974, 2994
BseLI CCNNNNNNNGG 5 cut(s) 296, 368, 584, 800, 1823
BseMI GCAATG 3 cut(s) 2382, 2877, 2944
BseMII CTCAG 4 cut(s) 305, 1634, 1977, 2542
BseNI ACTGG 7 cut(s) 661, 862, 863, 934, 2070, 2674, 2983
BseRI GAGGAG 4 cut(s) 73, 76, 1104, 2093
BseXI GCAGC 1 cut(s) 1083
BseYI CCCAGC 1 cut(s) 2462
BsgI GTGCAG 2 cut(s) 1830, 2699
BshFI GGCC 8 cut(s) 208, 225, 275, 279, 660, 804, 1074, 2680
BshNI GGYRCC 3 cut(s) 710, 2523, 2585
BshVI ATCGAT 2 cut(s) 2020, 2391
BsiHKAI GWGCWC 3 cut(s) 252, 1688, 2407
BsiSI CCGG 1 cut(s) 276
BslFI GGGAC 1 cut(s) 1678
BslI CCNNNNNNNGG 5 cut(s) 296, 368, 584, 800, 1823
BsmAI GTCTC 4 cut(s) 1201, 1398, 1403, 1644
BsmFI GGGAC 1 cut(s) 1678
BsmI GAATGC 1 cut(s) 1843
BsnI GGCC 8 cut(s) 208, 225, 275, 279, 660, 804, 1074, 2680
Bsp119I TTCGAA 1 cut(s) 2132
Bsp1286I GDGCHC 3 cut(s) 252, 1688, 2407
Bsp1407I TGTACA 1 cut(s) 2166
Bsp143I GATC 7 cut(s) 982, 1429, 2021, 2057, 2098, 2764, 2842
BspACI CCGC 8 cut(s) 98, 226, 267, 1164, 1452, 1847, 2207, 2425
BspANI GGCC 8 cut(s) 208, 225, 275, 279, 660, 804, 1074, 2680
BspCNI CTCAG 4 cut(s) 306, 1635, 1976, 2541
BspDI ATCGAT 2 cut(s) 2020, 2391
BspHI TCATGA 1 cut(s) 1147
BspLI GGNNCC 3 cut(s) 712, 2525, 2587
BspMAI CTGCAG 1 cut(s) 2056
BspMI ACCTGC 1 cut(s) 2721
BspOI GCTAGC 1 cut(s) 2342
BspPI GGATC 3 cut(s) 1437, 2065, 2759
BspT104I TTCGAA 1 cut(s) 2132
BspT107I GGYRCC 3 cut(s) 710, 2523, 2585
BspTI CTTAAG 2 cut(s) 1894, 2042
BsrBI CCGCTC 1 cut(s) 2427
BsrDI GCAATG 3 cut(s) 2382, 2877, 2944
BsrFI RCCGGY 1 cut(s) 275
BsrGI TGTACA 1 cut(s) 2166
BsrI ACTGG 7 cut(s) 661, 862, 863, 934, 2070, 2674, 2983
BssAI RCCGGY 1 cut(s) 275
BssECI CCNNGG 4 cut(s) 159, 1530, 1822, 2265
BssMI GATC 7 cut(s) 982, 1429, 2021, 2057, 2098, 2764, 2842
BssNAI GTATAC 1 cut(s) 1886
BssT1I CCWWGG 3 cut(s) 159, 1530, 1822
Bst1107I GTATAC 1 cut(s) 1886
Bst2UI CCWGG 4 cut(s) 210, 795, 2267, 2607
Bst4CI ACNGT 5 cut(s) 247, 1409, 2088, 2483, 2652
Bst6I CTCTTC 3 cut(s) 606, 792, 1036
BstAFI CTTAAG 2 cut(s) 1894, 2042
BstAUI TGTACA 1 cut(s) 2166
BstBI TTCGAA 1 cut(s) 2132
BstC8I GCNNGC 8 cut(s) 129, 269, 273, 277, 916, 1237, 1932, 2340
BstF5I GGATG 6 cut(s) 165, 714, 1573, 2539, 2974, 2994
BstH2I RGCGCY 1 cut(s) 2042
BstHHI GCGC 2 cut(s) 2011, 2041
BstKTI GATC 7 cut(s) 985, 1432, 2024, 2060, 2101, 2767, 2845
BstMAI GTCTC 4 cut(s) 1201, 1398, 1403, 1644
BstMBI GATC 7 cut(s) 982, 1429, 2021, 2057, 2098, 2764, 2842
BstMWI GCNNNNNNNGC 5 cut(s) 124, 137, 171, 1927, 2592
BstNI CCWGG 4 cut(s) 210, 795, 2267, 2607
BstNSI RCATGY 2 cut(s) 2437, 2695
BstSCI CCNGG 4 cut(s) 208, 793, 2265, 2605
BstSFI CTRYAG 2 cut(s) 2052, 2904
BstV1I GCAGC 1 cut(s) 1083
BstX2I RGATCY 2 cut(s) 1429, 2098
BstXI CCANNNNNNTGG 4 cut(s) 338, 857, 1531, 1753
BstYI RGATCY 2 cut(s) 1429, 2098
BstZ17I GTATAC 1 cut(s) 1886
Bsu15I ATCGAT 2 cut(s) 2020, 2391
Bsu36I CCTNAGG 1 cut(s) 2528
BsuRI GGCC 8 cut(s) 208, 225, 275, 279, 660, 804, 1074, 2680
BsuTUI ATCGAT 2 cut(s) 2020, 2391
BtgZI GCGATG 1 cut(s) 2924
BtrI CACGTC 2 cut(s) 953, 2632
BtsCI GGATG 6 cut(s) 165, 714, 1573, 2539, 2974, 2994
BtsIMutI CAGTG 5 cut(s) 252, 424, 855, 2063, 2488
BveI ACCTGC 1 cut(s) 2721
Cac8I GCNNGC 8 cut(s) 129, 269, 273, 277, 916, 1237, 1932, 2340
CciI TCATGA 1 cut(s) 1147
CfoI GCGC 2 cut(s) 2011, 2041
Cfr10I RCCGGY 1 cut(s) 275
Cfr13I GGNCC 4 cut(s) 802, 860, 1454, 2710
ClaI ATCGAT 2 cut(s) 2020, 2391
Csp6I GTAC 6 cut(s) 711, 866, 1814, 2167, 2524, 2802
CviQI GTAC 6 cut(s) 711, 866, 1814, 2167, 2524, 2802
DpnI GATC 7 cut(s) 984, 1431, 2023, 2059, 2100, 2766, 2844
DpnII GATC 7 cut(s) 982, 1429, 2021, 2057, 2098, 2764, 2842
DraI TTTAAA 1 cut(s) 2698
EaeI YGGCCR 5 cut(s) 206, 223, 273, 277, 658
Eam1104I CTCTTC 3 cut(s) 606, 792, 1036
EarI CTCTTC 3 cut(s) 606, 792, 1036
Ecl136II GAGCTC 1 cut(s) 1686
Eco130I CCWWGG 3 cut(s) 159, 1530, 1822
Eco24I GRGCYC 1 cut(s) 1688
Eco47I GGWCC 3 cut(s) 860, 1454, 2710
Eco47III AGCGCT 1 cut(s) 2040
Eco53kI GAGCTC 1 cut(s) 1686
Eco57I CTGAAG 3 cut(s) 328, 400, 515
Eco81I CCTNAGG 1 cut(s) 2528
EcoICRI GAGCTC 1 cut(s) 1686
EcoRII CCWGG 4 cut(s) 208, 793, 2265, 2605
EcoT14I CCWWGG 3 cut(s) 159, 1530, 1822
EcoT22I ATGCAT 2 cut(s) 619, 1913
EcoT38I GRGCYC 1 cut(s) 1688
ErhI CCWWGG 3 cut(s) 159, 1530, 1822
FalI AAGNNNNNCTT 2 cut(s) 1937, 1969
FaqI GGGAC 1 cut(s) 1678
FauI CCCGC 2 cut(s) 91, 260
FauNDI CATATG 1 cut(s) 2623
FbaI TGATCA 1 cut(s) 982
FblI GTMKAC 1 cut(s) 1885
Fnu4HI GCNGC 2 cut(s) 226, 1097
FokI GGATG 6 cut(s) 152, 701, 1580, 2546, 2981, 3001
FriOI GRGCYC 1 cut(s) 1688
FseI GGCCGGCC 1 cut(s) 279
Fsp4HI GCNGC 2 cut(s) 226, 1097
GlaI GCGC 2 cut(s) 2010, 2040
GluI GCNGC 2 cut(s) 226, 1097
GsaI CCCAGC 1 cut(s) 2466
GsuI CTGGAG 1 cut(s) 345
HaeII RGCGCY 1 cut(s) 2042
HaeIII GGCC 8 cut(s) 208, 225, 275, 279, 660, 804, 1074, 2680
HapII CCGG 1 cut(s) 276
HhaI GCGC 2 cut(s) 2011, 2041
Hin6I GCGC 2 cut(s) 2009, 2039
HinP1I GCGC 2 cut(s) 2009, 2039
HincII GTYRAC 4 cut(s) 2049, 2380, 2619, 2667
HindII GTYRAC 4 cut(s) 2049, 2380, 2619, 2667
HindIII AAGCTT 4 cut(s) 527, 670, 1271, 1606
HpaI GTTAAC 2 cut(s) 2380, 2667
HpaII CCGG 1 cut(s) 276
HphI GGTGA 6 cut(s) 1025, 1322, 1604, 2221, 2296, 2516
Hpy188I TCNGA 7 cut(s) 315, 622, 1158, 1403, 1576, 1644, 2361
Hpy99I CGWCG 1 cut(s) 2633
HpyAV CCTTC 5 cut(s) 424, 588, 785, 1777, 1799
HpyCH4III ACNGT 5 cut(s) 247, 1409, 2088, 2483, 2652
HpyCH4IV ACGT 6 cut(s) 445, 830, 952, 1200, 2631, 2746
HpyF10VI GCNNNNNNNGC 5 cut(s) 124, 137, 171, 1927, 2592
HpySE526I ACGT 6 cut(s) 445, 830, 952, 1200, 2631, 2746
HspAI GCGC 2 cut(s) 2009, 2039
KpnI GGTACC 2 cut(s) 714, 2527
KroI GCCGGC 1 cut(s) 275
KroNI GCCGGC 1 cut(s) 277
Ksp22I TGATCA 1 cut(s) 982
KspAI GTTAAC 2 cut(s) 2380, 2667
Kzo9I GATC 7 cut(s) 982, 1429, 2021, 2057, 2098, 2764, 2842
LmnI GCTCC 2 cut(s) 195, 2432
Lsp1109I GCAGC 1 cut(s) 1083
LweI GCATC 5 cut(s) 174, 626, 1561, 1920, 2979
MaeII ACGT 6 cut(s) 445, 830, 952, 1200, 2631, 2746
MaeIII GTNAC 5 cut(s) 241, 1013, 1541, 2001, 2483
MalI GATC 7 cut(s) 984, 1431, 2023, 2059, 2100, 2766, 2844
MbiI CCGCTC 1 cut(s) 2427
MboI GATC 7 cut(s) 982, 1429, 2021, 2057, 2098, 2764, 2842
MflI RGATCY 2 cut(s) 1429, 2098
MhlI GDGCHC 3 cut(s) 252, 1688, 2407
MlsI TGGCCA 2 cut(s) 208, 660
MluNI TGGCCA 2 cut(s) 208, 660
MlyI GAGTC 3 cut(s) 1351, 1627, 2965
MmeI TCCRAC 4 cut(s) 527, 1165, 1407, 2637
Mox20I TGGCCA 2 cut(s) 208, 660
Mph1103I ATGCAT 2 cut(s) 619, 1913
MroNI GCCGGC 1 cut(s) 275
MscI TGGCCA 2 cut(s) 208, 660
Msp20I TGGCCA 2 cut(s) 208, 660
MspCI CTTAAG 2 cut(s) 1894, 2042
MspI CCGG 1 cut(s) 276
MspR9I CCNGG 4 cut(s) 210, 795, 2267, 2607
Mva1269I GAATGC 1 cut(s) 1843
MvaI CCWGG 4 cut(s) 210, 795, 2267, 2607
MwoI GCNNNNNNNGC 5 cut(s) 124, 137, 171, 1927, 2592
NaeI GCCGGC 1 cut(s) 277
NdeI CATATG 1 cut(s) 2623
NdeII GATC 7 cut(s) 982, 1429, 2021, 2057, 2098, 2764, 2842
NgoMIV GCCGGC 1 cut(s) 275
NheI GCTAGC 1 cut(s) 2338
NlaIV GGNNCC 3 cut(s) 712, 2525, 2587
NmuCI GTSAC 2 cut(s) 1013, 2483
NsiI ATGCAT 2 cut(s) 619, 1913
NspI RCATGY 2 cut(s) 2437, 2695
NspV TTCGAA 1 cut(s) 2132
PagI TCATGA 1 cut(s) 1147
PciI ACATGT 1 cut(s) 2691
PctI GAATGC 1 cut(s) 1843
PdiI GCCGGC 1 cut(s) 277
PflFI GACNNNGTC 1 cut(s) 1636
PflMI CCANNNNNTGG 1 cut(s) 368
PkrI GCNGC 2 cut(s) 227, 1098
PleI GAGTC 3 cut(s) 1351, 1627, 2964
PpsI GAGTC 3 cut(s) 1351, 1627, 2964
PscI ACATGT 1 cut(s) 2691
Psp124BI GAGCTC 1 cut(s) 1688
Psp1406I AACGTT 1 cut(s) 830
Psp6I CCWGG 4 cut(s) 208, 793, 2265, 2605
PspFI CCCAGC 1 cut(s) 2462
PspGI CCWGG 4 cut(s) 208, 793, 2265, 2605
PspN4I GGNNCC 3 cut(s) 712, 2525, 2587
PspPI GGNCC 4 cut(s) 802, 860, 1454, 2710
PstI CTGCAG 1 cut(s) 2056
PsuI RGATCY 2 cut(s) 1429, 2098
PsyI GACNNNGTC 1 cut(s) 1636
RigI GGCCGGCC 1 cut(s) 279
RsaI GTAC 6 cut(s) 712, 867, 1815, 2168, 2525, 2803
RsaNI GTAC 6 cut(s) 711, 866, 1814, 2167, 2524, 2802
SacI GAGCTC 1 cut(s) 1688
SatI GCNGC 2 cut(s) 226, 1097
Sau3AI GATC 7 cut(s) 982, 1429, 2021, 2057, 2098, 2764, 2842
Sau96I GGNCC 4 cut(s) 802, 860, 1454, 2710
ScaI AGTACT 1 cut(s) 2803
SchI GAGTC 3 cut(s) 1351, 1627, 2965
ScrFI CCNGG 4 cut(s) 210, 795, 2267, 2607
SduI GDGCHC 3 cut(s) 252, 1688, 2407
SfaNI GCATC 5 cut(s) 174, 626, 1561, 1920, 2979
SfcI CTRYAG 2 cut(s) 2052, 2904
SfuI TTCGAA 1 cut(s) 2132
SinI GGWCC 3 cut(s) 860, 1454, 2710
SmlI CTYRAG 5 cut(s) 304, 1681, 1894, 2042, 2322
SmoI CTYRAG 5 cut(s) 304, 1681, 1894, 2042, 2322
SpeI ACTAGT 1 cut(s) 394
SsiI CCGC 8 cut(s) 98, 226, 267, 1164, 1452, 1847, 2207, 2425
SstI GAGCTC 1 cut(s) 1688
StyD4I CCNGG 4 cut(s) 208, 793, 2265, 2605
StyI CCWWGG 3 cut(s) 159, 1530, 1822
TaaI ACNGT 5 cut(s) 247, 1409, 2088, 2483, 2652
TaiI ACGT 6 cut(s) 448, 833, 955, 1203, 2634, 2749
TaqI TCGA 5 cut(s) 825, 2020, 2132, 2391, 2845
TatI WGTACW 2 cut(s) 2166, 2801
TauI GCSGC 1 cut(s) 228
TscAI CASTG 5 cut(s) 252, 424, 862, 2070, 2488
TseFI GTSAC 2 cut(s) 1013, 2483
TseI GCWGC 1 cut(s) 1096
Tsp45I GTSAC 2 cut(s) 1013, 2483
TspGWI ACGGA 3 cut(s) 1148, 2658, 2994
TspRI CASTG 5 cut(s) 252, 424, 862, 2070, 2488
Tth111I GACNNNGTC 1 cut(s) 1636
Van91I CCANNNNNTGG 1 cut(s) 368
Vha464I CTTAAG 2 cut(s) 1894, 2042
VpaK11BI GGWCC 3 cut(s) 860, 1454, 2710
XapI RAATTY 5 cut(s) 589, 961, 1225, 1651, 1777
XbaI TCTAGA 1 cut(s) 1288
XceI RCATGY 2 cut(s) 2437, 2695
XmiI GTMKAC 1 cut(s) 1885
ZrmI AGTACT 1 cut(s) 2803
Zsp2I ATGCAT 2 cut(s) 619, 1913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.