Rmu_sc0011565.1_g000001
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011565.1
Physical Location & Seq
Forward (+)
692 .. 2711
2020 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011565.1_g000001.1.cds

Sequence Viewer

Length: 1905 bp
atgatcatcaacttggcctcttcaaatctaagaggaaatgaggtggaaagactatccttgcttgcctttaaatctgaaatagtcagtgatcctctgggcatccttagctcctggaatgattcctccaacttatgtgacgagtggcgagggattacttgcggccaaagacaccggcgagtcacggttctgtacctccagtccagccacctgatgggcattctatctccacacatcggaaacttgagctttctcaggacattaaatctccaaagcaatagcttcaaccacaccattcctcaagaaattggtcgattgtcccggctgcaagtactacacctcgggaacaacttcttcgaaggtgatatccccaaagaaattagccgatgcacgactttgataagtttgcacctgaacggaaacatgttgcatgggagaattcctgaatctttgagttctttgcggcagattcaagattttgacctctctcgtaacaacttgtctggaacaattcccgattatttgcagaatttcaccttcttgctcaatttgaacctatcctttaatgattttgaaggtgaagtaggagttttcaggaatacaagtgtggtttctattatgggaaacacacgaatttgtggaggtgtacctcagttaagattgctcaattttatctctaatcgatccaactcaaataagccaaaatcattttctaagtataaaccaattatcccatttttttgtgggacaattggaattattatcttagtggtgtgctttgtacgcttctatagatcaataaaagcaagagttgagcaaagaaaatcaagagttcagtcaacttcagaacgatcattggacatttcattcttaaagttgtcatatggagatctctttcaagcaactggtggattctcttcttggaatttgattggtgccggtagttctggttctgtgttctggggagttctcgatcagccaaaagaaagaattgttgctgtcaaagtactcaatcttcaaaacgcgactacttctaatagtttcatagctgaatgtcaattcttgaaaaacactaggcaccgaaatcttgtcaaactagtgactgcttgctctagtattgattttcaaggaaatgagttcaaagctttggtttttgagtacatgatgcatggaagtctagatgagtggctgcatgattcagctgacagagtagttgagctacccattgtggaggtgcatttgaatcttatccaaagggtaaatattgccattgacgtagctagcgctttggattatttgcacaattattttcacaccccaatagttcattgtgatttaaagcctagtaacgttctcttggaaaaagacatgactgcctgtgtttgtgactttggtttggcaagttacctcccaaacacttgtccggtttcttcgctagaacgctcttccaattcgataacgggtaccattggctatattcccccagagtatggcatgggaagtaaggtgtcaacctacggagacgtgtatagctatggaatcctgttactagagatgcttactggtaagaggccaacagatgacatgtttacagacgacatcgacttgcacaattttgttctgatggctttgcctgaacgtgtgaaagaaatatgtgatcctgtgcttcttcaagaaaaggaaagcagcactagtacaaatccggcaagcaataggaatgatgtccaaaatgatgaaacacgaagagttgaagagtgccttatttccattgctaggataggagttgcttgttctgtgcatttgcccaaagtgcgaatggagattgggaaagttttagctgaactacgtgtaatcagggatgtactgactggaaccaggatgcctagagagcacatgataactgcttaa

Protein Analysis

634

Amino Acids

71.07

Weight (kDa)

6.98

Isoelectric Point (pI)

40.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1460
AccB1I GGYRCC 3 cut(s) 932, 1074, 1460
AccB7I CCANNNNNTGG 2 cut(s) 211, 1487
AccII CGCG 1 cut(s) 1022
AciI CCGC 2 cut(s) 159, 460
AclI AACGTT 1 cut(s) 1347
AclWI GGATC 3 cut(s) 83, 675, 1649
AcoI YGGCCR 1 cut(s) 160
AcsI RAATTY 4 cut(s) 435, 526, 630, 922
AcuI CTGAAG 1 cut(s) 825
AfaI GTAC 9 cut(s) 191, 330, 645, 780, 1005, 1157, 1462, 1693, 1860
AfeI AGCGCT 1 cut(s) 1282
AfiI CCNNNNNNNGG 4 cut(s) 211, 233, 1487, 1770
AflIII ACRYGT 5 cut(s) 420, 1521, 1581, 1636, 1843
AhlI ACTAGT 2 cut(s) 1093, 1688
AjiI CACGTC 1 cut(s) 1522
AjnI CCWGG 2 cut(s) 110, 1871
AjuI GAANNNNNNNTTGG 2 cut(s) 691, 723
Alw21I GWGCWC 1 cut(s) 1890
Alw26I GTCTC 1 cut(s) 1512
AlwI GGATC 3 cut(s) 83, 675, 1649
Ama87I CYCGRG 1 cut(s) 338
Aor51HI AGCGCT 1 cut(s) 1282
AoxI GGCC 3 cut(s) 15, 160, 1568
ApeKI GCWGC 3 cut(s) 322, 1186, 1683
ApoI RAATTY 4 cut(s) 435, 526, 630, 922
Asp700I GAANNNNTTC 1 cut(s) 347
Asp718I GGTACC 1 cut(s) 1460
AspLEI GCGC 1 cut(s) 1283
AsuC2I CCSGG 1 cut(s) 319
AsuHPI GGTGA 3 cut(s) 371, 523, 587
AsuII TTCGAA 1 cut(s) 354
AsuNHI GCTAGC 1 cut(s) 1277
AvaI CYCGRG 1 cut(s) 338
BanI GGYRCC 3 cut(s) 932, 1074, 1460
BarI GAAGNNNNNNTAC 2 cut(s) 996, 1028
Bbv12I GWGCWC 1 cut(s) 1890
BbvI GCAGC 3 cut(s) 309, 1173, 1695
BccI CCATC 2 cut(s) 205, 1615
BciT130I CCWGG 2 cut(s) 112, 1873
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 319
BcoDI GTCTC 1 cut(s) 1512
BcuI ACTAGT 2 cut(s) 1093, 1688
BfmI CTRYAG 1 cut(s) 787
BfoI RGCGCY 1 cut(s) 1284
BglII AGATCT 1 cut(s) 886
BisI GCNGC 5 cut(s) 160, 323, 461, 1187, 1684
BlsI GCNGC 5 cut(s) 161, 324, 462, 1188, 1685
BmcAI AGTACT 2 cut(s) 330, 1005
Bme1390I CCNGG 3 cut(s) 112, 319, 1873
BmeT110I CYCGRG 1 cut(s) 338
BmgBI CACGTC 1 cut(s) 1522
BmiI GGNNCC 4 cut(s) 934, 1076, 1462, 1870
BmrFI CCNGG 3 cut(s) 112, 319, 1873
BmsI GCATC 5 cut(s) 108, 374, 1152, 1542, 1866
BmtI GCTAGC 1 cut(s) 1281
BpmI CTGGAG 1 cut(s) 179
Bpu10I CCTNAGC 1 cut(s) 104
Bpu14I TTCGAA 1 cut(s) 354
BpuEI CTTGAG 2 cut(s) 262, 282
BpuMI CCSGG 1 cut(s) 319
Bsa29I ATCGAT 1 cut(s) 679
BsaAI YACGTR 1 cut(s) 1844
BsaJI CCNNGG 1 cut(s) 337
BsaWI WCCGGW 1 cut(s) 1420
Bsc4I CCNNNNNNNGG 4 cut(s) 211, 233, 1487, 1770
Bse118I RCCGGY 2 cut(s) 171, 935
Bse1I ACTGG 4 cut(s) 196, 907, 1564, 1870
Bse3DI GCAATG 1 cut(s) 1764
BseBI CCWGG 2 cut(s) 112, 1873
BseCI ATCGAT 1 cut(s) 679
BseDI CCNNGG 1 cut(s) 337
BseGI GGATG 3 cut(s) 99, 1861, 1881
BseLI CCNNNNNNNGG 4 cut(s) 211, 233, 1487, 1770
BseMI GCAATG 1 cut(s) 1764
BseMII CTCAG 2 cut(s) 265, 662
BseNI ACTGG 4 cut(s) 196, 907, 1564, 1870
BseXI GCAGC 3 cut(s) 309, 1173, 1695
Bsh1236I CGCG 1 cut(s) 1022
BshFI GGCC 3 cut(s) 17, 162, 1570
BshNI GGYRCC 3 cut(s) 932, 1074, 1460
BshVI ATCGAT 1 cut(s) 679
BsiHKAI GWGCWC 1 cut(s) 1890
BsiHKCI CYCGRG 1 cut(s) 338
BsiSI CCGG 5 cut(s) 172, 319, 936, 1421, 1700
BslFI GGGAC 2 cut(s) 301, 757
BslI CCNNNNNNNGG 4 cut(s) 211, 233, 1487, 1770
BsmAI GTCTC 1 cut(s) 1512
BsmBI CGTCTC 1 cut(s) 1512
BsmFI GGGAC 2 cut(s) 301, 757
BsmI GAATGC 1 cut(s) 216
BsnI GGCC 3 cut(s) 17, 162, 1570
BsoBI CYCGRG 1 cut(s) 338
Bsp119I TTCGAA 1 cut(s) 354
Bsp1286I GDGCHC 1 cut(s) 1890
Bsp143I GATC 8 cut(s) 3, 88, 680, 791, 848, 886, 970, 1654
BspACI CCGC 2 cut(s) 159, 460
BspANI GGCC 3 cut(s) 17, 162, 1570
BspCNI CTCAG 2 cut(s) 264, 661
BspDI ATCGAT 1 cut(s) 679
BspFNI CGCG 1 cut(s) 1022
BspLI GGNNCC 4 cut(s) 934, 1076, 1462, 1870
BspOI GCTAGC 1 cut(s) 1281
BspPI GGATC 3 cut(s) 83, 675, 1649
BspQI GCTCTTC 1 cut(s) 1447
BspT104I TTCGAA 1 cut(s) 354
BspT107I GGYRCC 3 cut(s) 932, 1074, 1460
BsrDI GCAATG 1 cut(s) 1764
BsrFI RCCGGY 2 cut(s) 171, 935
BsrI ACTGG 4 cut(s) 196, 907, 1564, 1870
BssAI RCCGGY 2 cut(s) 171, 935
BssECI CCNNGG 1 cut(s) 337
BssMI GATC 8 cut(s) 3, 88, 680, 791, 848, 886, 970, 1654
Bst2UI CCWGG 2 cut(s) 112, 1873
Bst4CI ACNGT 1 cut(s) 184
Bst6I CTCTTC 5 cut(s) 25, 919, 1447, 1735, 1743
BstBAI YACGTR 1 cut(s) 1844
BstBI TTCGAA 1 cut(s) 354
BstC8I GCNNGC 4 cut(s) 63, 1105, 1279, 1705
BstDEI CTNAG 6 cut(s) 29, 104, 251, 648, 711, 763
BstF5I GGATG 3 cut(s) 99, 1861, 1881
BstFNI CGCG 1 cut(s) 1022
BstH2I RGCGCY 1 cut(s) 1284
BstHHI GCGC 1 cut(s) 1283
BstKTI GATC 8 cut(s) 6, 91, 683, 794, 851, 889, 973, 1657
BstMAI GTCTC 1 cut(s) 1512
BstMBI GATC 8 cut(s) 3, 88, 680, 791, 848, 886, 970, 1654
BstMWI GCNNNNNNNGC 4 cut(s) 105, 780, 1807, 1885
BstNI CCWGG 2 cut(s) 112, 1873
BstNSI RCATGY 2 cut(s) 424, 1585
BstSCI CCNGG 3 cut(s) 110, 317, 1871
BstSFI CTRYAG 1 cut(s) 787
BstUI CGCG 1 cut(s) 1022
BstV1I GCAGC 3 cut(s) 309, 1173, 1695
BstX2I RGATCY 1 cut(s) 886
BstYI RGATCY 1 cut(s) 886
Bsu15I ATCGAT 1 cut(s) 679
BsuRI GGCC 3 cut(s) 17, 162, 1570
BsuTUI ATCGAT 1 cut(s) 679
BtrI CACGTC 1 cut(s) 1522
BtsCI GGATG 3 cut(s) 99, 1861, 1881
BtsIMutI CAGTG 1 cut(s) 91
Cac8I GCNNGC 4 cut(s) 63, 1105, 1279, 1705
CfoI GCGC 1 cut(s) 1283
Cfr10I RCCGGY 2 cut(s) 171, 935
ClaI ATCGAT 1 cut(s) 679
Csp6I GTAC 9 cut(s) 190, 329, 644, 779, 1004, 1156, 1461, 1692, 1859
CviAII CATG 9 cut(s) 421, 428, 1159, 1166, 1190, 1366, 1492, 1582, 1891
CviQI GTAC 9 cut(s) 190, 329, 644, 779, 1004, 1156, 1461, 1692, 1859
DdeI CTNAG 6 cut(s) 29, 104, 251, 648, 711, 763
DpnI GATC 8 cut(s) 5, 90, 682, 793, 850, 888, 972, 1656
DpnII GATC 8 cut(s) 3, 88, 680, 791, 848, 886, 970, 1654
DraI TTTAAA 2 cut(s) 70, 1335
EaeI YGGCCR 1 cut(s) 160
Eam1104I CTCTTC 5 cut(s) 25, 919, 1447, 1735, 1743
EarI CTCTTC 5 cut(s) 25, 919, 1447, 1735, 1743
Eco32I GATATC 1 cut(s) 364
Eco47III AGCGCT 1 cut(s) 1282
Eco57I CTGAAG 1 cut(s) 825
Eco88I CYCGRG 1 cut(s) 338
EcoRI GAATTC 1 cut(s) 435
EcoRII CCWGG 2 cut(s) 110, 1871
EcoRV GATATC 1 cut(s) 364
EcoT22I ATGCAT 1 cut(s) 1167
Esp3I CGTCTC 1 cut(s) 1512
FaeI CATG 9 cut(s) 424, 431, 1162, 1169, 1193, 1369, 1495, 1585, 1894
FalI AAGNNNNNCTT 2 cut(s) 1740, 1772
FaqI GGGAC 2 cut(s) 301, 757
FatI CATG 9 cut(s) 420, 427, 1158, 1165, 1189, 1365, 1491, 1581, 1890
FauNDI CATATG 1 cut(s) 880
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 5 cut(s) 160, 323, 461, 1187, 1684
FokI GGATG 3 cut(s) 86, 1868, 1888
Fsp4HI GCNGC 5 cut(s) 160, 323, 461, 1187, 1684
GlaI GCGC 1 cut(s) 1282
GluI GCNGC 5 cut(s) 160, 323, 461, 1187, 1684
GsuI CTGGAG 1 cut(s) 179
HaeII RGCGCY 1 cut(s) 1284
HaeIII GGCC 3 cut(s) 17, 162, 1570
HapII CCGG 5 cut(s) 172, 319, 936, 1421, 1700
HhaI GCGC 1 cut(s) 1283
Hin1II CATG 9 cut(s) 424, 431, 1162, 1169, 1193, 1369, 1495, 1585, 1894
Hin6I GCGC 1 cut(s) 1281
HinP1I GCGC 1 cut(s) 1281
HincII GTYRAC 2 cut(s) 837, 1509
HindII GTYRAC 2 cut(s) 837, 1509
HindIII AAGCTT 1 cut(s) 1140
HinfI GANTC 8 cut(s) 119, 177, 443, 466, 909, 1193, 1240, 1536
HpaII CCGG 5 cut(s) 172, 319, 936, 1421, 1700
HphI GGTGA 3 cut(s) 371, 523, 587
Hpy166II GTNNAC 4 cut(s) 644, 837, 1509, 1587
Hpy188I TCNGA 4 cut(s) 76, 236, 844, 1620
Hpy8I GTNNAC 4 cut(s) 644, 837, 1509, 1587
HpyAV CCTTC 3 cut(s) 350, 544, 566
HpyCH4III ACNGT 1 cut(s) 184
HpyCH4IV ACGT 5 cut(s) 1272, 1347, 1521, 1636, 1843
HpyF10VI GCNNNNNNNGC 4 cut(s) 105, 780, 1807, 1885
HpyF3I CTNAG 6 cut(s) 29, 104, 251, 648, 711, 763
HpySE526I ACGT 5 cut(s) 1272, 1347, 1521, 1636, 1843
Hsp92II CATG 9 cut(s) 424, 431, 1162, 1169, 1193, 1369, 1495, 1585, 1894
HspAI GCGC 1 cut(s) 1281
KpnI GGTACC 1 cut(s) 1464
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 8 cut(s) 3, 88, 680, 791, 848, 886, 970, 1654
LguI GCTCTTC 1 cut(s) 1447
LmnI GCTCC 1 cut(s) 113
Lsp1109I GCAGC 3 cut(s) 309, 1173, 1695
LweI GCATC 5 cut(s) 108, 374, 1152, 1542, 1866
MaeII ACGT 5 cut(s) 1272, 1347, 1521, 1636, 1843
MaeIII GTNAC 8 cut(s) 134, 178, 488, 1096, 1343, 1382, 1400, 1542
MalI GATC 8 cut(s) 5, 90, 682, 793, 850, 888, 972, 1656
MboI GATC 8 cut(s) 3, 88, 680, 791, 848, 886, 970, 1654
MboII GAAGA 9 cut(s) 12, 343, 906, 1004, 1419, 1434, 1658, 1752, 1760
MfeI CAATTG 1 cut(s) 747
MflI RGATCY 1 cut(s) 886
MhlI GDGCHC 1 cut(s) 1890
MlyI GAGTC 1 cut(s) 186
MmeI TCCRAC 2 cut(s) 150, 708
Mph1103I ATGCAT 1 cut(s) 1167
MroXI GAANNNNTTC 1 cut(s) 347
MseI TTAA 7 cut(s) 69, 260, 561, 653, 869, 1334, 1903
MspA1I CMGCKG 1 cut(s) 1199
MspI CCGG 5 cut(s) 172, 319, 936, 1421, 1700
MspR9I CCNGG 3 cut(s) 112, 319, 1873
MunI CAATTG 1 cut(s) 747
Mva1269I GAATGC 1 cut(s) 216
MvaI CCWGG 2 cut(s) 112, 1873
MvnI CGCG 1 cut(s) 1022
MwoI GCNNNNNNNGC 4 cut(s) 105, 780, 1807, 1885
NciI CCSGG 1 cut(s) 319
NdeI CATATG 1 cut(s) 880
NdeII GATC 8 cut(s) 3, 88, 680, 791, 848, 886, 970, 1654
NheI GCTAGC 1 cut(s) 1277
NlaIII CATG 9 cut(s) 424, 431, 1162, 1169, 1193, 1369, 1495, 1585, 1894
NlaIV GGNNCC 4 cut(s) 934, 1076, 1462, 1870
NmuCI GTSAC 4 cut(s) 134, 178, 1096, 1382
NsiI ATGCAT 1 cut(s) 1167
NspI RCATGY 2 cut(s) 424, 1585
NspV TTCGAA 1 cut(s) 354
PciI ACATGT 2 cut(s) 420, 1581
PciSI GCTCTTC 1 cut(s) 1447
PctI GAATGC 1 cut(s) 216
PdmI GAANNNNTTC 1 cut(s) 347
PfeI GAWTC 7 cut(s) 119, 443, 466, 909, 1193, 1240, 1536
PflMI CCANNNNNTGG 2 cut(s) 211, 1487
PfoI TCCNGGA 1 cut(s) 110
PkrI GCNGC 5 cut(s) 161, 324, 462, 1188, 1685
PleI GAGTC 1 cut(s) 185
PpsI GAGTC 1 cut(s) 185
Ppu21I YACGTR 1 cut(s) 1844
PscI ACATGT 2 cut(s) 420, 1581
Psp1406I AACGTT 1 cut(s) 1347
Psp6I CCWGG 2 cut(s) 110, 1871
PspGI CCWGG 2 cut(s) 110, 1871
PspN4I GGNNCC 4 cut(s) 934, 1076, 1462, 1870
PsrI GAACNNNNNNTAC 2 cut(s) 931, 963
PsuI RGATCY 1 cut(s) 886
PvuII CAGCTG 1 cut(s) 1199
RsaI GTAC 9 cut(s) 191, 330, 645, 780, 1005, 1157, 1462, 1693, 1860
RsaNI GTAC 9 cut(s) 190, 329, 644, 779, 1004, 1156, 1461, 1692, 1859
SapI GCTCTTC 1 cut(s) 1447
SaqAI TTAA 7 cut(s) 69, 260, 561, 653, 869, 1334, 1903
SatI GCNGC 5 cut(s) 160, 323, 461, 1187, 1684
Sau3AI GATC 8 cut(s) 3, 88, 680, 791, 848, 886, 970, 1654
ScaI AGTACT 2 cut(s) 330, 1005
SchI GAGTC 1 cut(s) 186
ScrFI CCNGG 3 cut(s) 112, 319, 1873
SduI GDGCHC 1 cut(s) 1890
SfaNI GCATC 5 cut(s) 108, 374, 1152, 1542, 1866
SfcI CTRYAG 1 cut(s) 787
SfuI TTCGAA 1 cut(s) 354
SgrAI CRCCGGYG 1 cut(s) 171
SmlI CTYRAG 2 cut(s) 241, 297
SmoI CTYRAG 2 cut(s) 241, 297
SpeI ACTAGT 2 cut(s) 1093, 1688
SsiI CCGC 2 cut(s) 159, 460
SspI AATATT 1 cut(s) 1261
StyD4I CCNGG 3 cut(s) 110, 317, 1871
TaaI ACNGT 1 cut(s) 184
TaiI ACGT 5 cut(s) 1275, 1350, 1524, 1639, 1846
TaqI TCGA 6 cut(s) 310, 354, 679, 969, 1451, 1599
TatI WGTACW 5 cut(s) 328, 1003, 1155, 1691, 1858
TauI GCSGC 2 cut(s) 162, 463
TfiI GAWTC 7 cut(s) 119, 443, 466, 909, 1193, 1240, 1536
Tru1I TTAA 7 cut(s) 69, 260, 561, 653, 869, 1334, 1903
Tru9I TTAA 7 cut(s) 69, 260, 561, 653, 869, 1334, 1903
TscAI CASTG 1 cut(s) 91
TseFI GTSAC 4 cut(s) 134, 178, 1096, 1382
TseI GCWGC 3 cut(s) 322, 1186, 1683
Tsp45I GTSAC 4 cut(s) 134, 178, 1096, 1382
TspDTI ATGAA 4 cut(s) 852, 1030, 1313, 1746
TspGWI ACGGA 2 cut(s) 429, 1530
TspRI CASTG 1 cut(s) 91
Van91I CCANNNNNTGG 2 cut(s) 211, 1487
XapI RAATTY 4 cut(s) 435, 526, 630, 922
XbaI TCTAGA 1 cut(s) 1174
XceI RCATGY 2 cut(s) 424, 1585
XcmI CCANNNNNNNNNTGG 2 cut(s) 208, 1810
XmnI GAANNNNTTC 1 cut(s) 347
ZrmI AGTACT 2 cut(s) 330, 1005
Zsp2I ATGCAT 1 cut(s) 1167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.