RLG00000028264
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
20679744 .. 20682794
3051 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028264

Sequence Viewer

Length: 2943 bp
ATGGAGTTCTGGGGGTTCAGTACTAGCATTTGGTCGATTATCTTACAGCTCTTTCTCCTTATTTCAGCCTCTTCAGGTCTAGGAGGAGGTCAATTGGATAAGCTGGCATTGCTAGCCTTGAAAGCTGAAATGAATGATACCCTTGGCATCCTTAGCTCATGGAATGAATCCCTACCTGTCTGCAAGTGGCCAGGCATTCACTGCAGTCGAAAACACCTGAGAGTCACGGTGCTGGACCTCCAGTCAAGCCAGCTCAAGGGTCACCTGTCTTACCACATCGGAAACTTGAGCTTTCTCAGGGTATTAAACCTCCAAAACAATAGCTTCAGCCAGATCATCCCTAAAGAAATCGGTTCATTGTCCAAGCTTCAGGTACTTAATTTAGGCAAGAACAATTTAATAGGAGAAATCCCAGCTTGTTTTGGAAATCTTTCTTTTCTTCATATGTTTTCTGTGGAACAAAATAATCTGGTTGGAGCTATTCCAAGTACCATTGGAAAATTAAAAAGCTTAACATTTCTTGCACTGGGTACAAATAACTTGACTGGTACTCTCCCTCCATCCATATACAACCTCTCTTCAATCAAGCACATTTCACTGCTTTTTAACCAACTAGATGGAACTCTTCCTTTTGGATTGGGGCTCTCAATATTTCCACAACTCGAAATCTTTCATTTCCACATGAACCAATTCAGTGGAGAAATACCAATTACAATCTCCAATGCCACCCACCTCTCAGAATTTGGAATCTCACAGAACCATTTTACTGGCAAAGTACCTAGCATGGCGAGGATGACAAATCTGTTTAGGGTAGAAATGGATGATAACAATCTTGGATATGGGGATAACGATTTGGGTTTTGTCTCTTCTTTGGTTAACAGCAGTAAATTAGAGCTGTTGGGATTTAATGGAAATAAATTTCAAGGAGTTCTACCTGAGTCCATAGGCAATCTCTCAAAAAAGATCAAGGCAATTAGATTGGGAAGAAATCAGATACGCGGAAGCATTCCAATTGGGATTGGAAATCTCATCAACTTGGGGATACTAGGCTTGGATATCAACCTATTAACAGGCCCTGTACCAAGCTCAATTGGTAAACTACATAAGCTGTATAATCTGTTTCTGAATCACAATCAGCTGTCAGGTACTATCCCATCTTCTCTAGGAAATCTAACTTCACTAAGCACATTGTTTCTCTTTTCAAACAACTTACGAGGAGGAATACCACAGAGTCTTGGTCAATGCAACAACTTGCTTGTTTTGGTTCTTTCTCAAAATAATCTTAGTGGTTTCATTCCACCTGAAATCCTCAGTTTATCCTCCTTGTCACAAGTTTTGGATTTGTCTAGTAACCATTTTATTGGTCCCATTTCTAGTGAAGTAGGTAAGTTAAAGAATCTTGTTGCCTTGGATGTTTCTGAAAACAAGTTGTCAGGTTCGATTCCATCGGACATACGGAGTTGCAAAAGTTTGGAAACATTGCATTTGGAAGGGAACTTGTTGGAAGGGATGCTTCTTGGTTGGTTGTTGGAGGTGAGAGGTCTTGAAGATATTGACGCCTCTCGTAACAACTTGTCTGGCAAGATTCCTGATGCCTTTGGGAATCTCCCATTTTTGCATAATTTGAATCTGTCATTTAATGATTTTGATGGTGCAGTACCATTGGACGGAGTTTTCCAGAATACTAGTGCGTTTTCTATCATGGGAAACACACGGCTTTGTGGAGGTATACCTACCTTAAGACTTCCCAGATGCAATTCTGCAGAATCGATTCCAAGGGTGAAAATCATTACCTCAATTGCTTGTAGCGGGGTTATTGTTATCATAGTGTTGTGCTTTTTGCTTATTCACCCGTTAAGAAAAGGAACAGTTAAGTCGACACCAAGATCATGCTCATTGGGGGTTTCACAATTGAAAGTGTCATATGGAGATCTTCTCGTAGCAACTAATGGGTTCTCTCCCCGGAATTTGATTGGTAGTGGTAGGTTTGGGTCTGTGTATAGGGGAATTCTCCATCAGGAAGAAAGAATTGTTGCAGTGAAAGTACTTAATCTTCAAAGTTCAAGAGGAAGTTTTATAGCTGAATGTGAAATCTTGAAAAGCATTAGGCACCGGAATATTGTCAAATTACTAACTGCTTGTGCAAGTATCGATTTCAAAGGAAATGATTTCAAAGCTTTGGTGTATCAGTTTATGATGAATGGAAGTTTAGAAGAATGGCTACACAGTTCAGCTGATAGACTACCTGGGGCTCCCTTTGTGCAAGGGTATTTGAATCTTATTCAGAGGGTAAACATTGCCATTGACATAGCTACTGCTCTGGATTATATGCACAATTTCTTTCACAAGCCAATAGTTCATTGTGATTTGAAGCCTCGTAACATTCTCTTGGACAATGATATGAATGCCTGTGTTGGTGACTTTGGTTTAGCAAGGTACCTAACAAATCCACTCGACGCACATGAAAATTCTTCCAATGCAATAATGGGTTCCATCGGCTATATTGCTCCAGAGTATGGTATGGGAAGTCCGGTGTCAGCATATGGCGACGTGTATAGCTATGGGATCTTATTATTGGAGATGTTTACGGGCAAGAGGCCAACTGCTGACATGTTTACAGATGGTCTGAACCTGCACAAGTATGTTAGGATGACTTTGCCTGAATGTGTGAAAGAAATATATGATCCAGTGCTTCTTCAAAGTAAAGAACGCAGCACTATCATTAATTCCGGGATGAGCAACAGGAATCACATCCAGAATGATCAGAGACAAAGGGTTGAAGAATGCTTGGTTTCCATTGCTAGGATAGGAGTTGCTTGTTCAGTAGAGTTGCCCAAAGCGCGTATGGAGATTGGGAAAGTGTTAGCTGAATTACGTCTAATAAGAGATGTACTAACTAGAACCAAGATGCCTAGAGAGCGTATGATAAAGCCTATAATGTAA

Protein Analysis

981

Amino Acids

107.37

Weight (kDa)

8.79

Isoelectric Point (pI)

36.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 69 3.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 76 - 263 4e-16 Leucine-rich repeat region
LRR_14 PF23598 314 - 424 5.4e-07 Leucine-rich repeat region
LRR_8 PF13855 444 - 501 9e-07 Leucine rich repeat
Pkinase PF00069 656 - 874 1.7e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 657 - 895 9.4e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2640
Acc65I GGTACC 1 cut(s) 2436
AccB1I GGYRCC 2 cut(s) 2109, 2436
AccB7I CCANNNNNTGG 1 cut(s) 2516
AccI GTMKAC 2 cut(s) 1729, 1877
AccII CGCG 2 cut(s) 999, 2842
AciI CCGC 2 cut(s) 999, 1809
AclWI GGATC 2 cut(s) 2573, 2678
AcoI YGGCCR 1 cut(s) 188
AcsI RAATTY 5 cut(s) 740, 917, 1966, 2007, 2467
AcuI CTGAAG 3 cut(s) 57, 310, 353
AcyI GRCGYC 1 cut(s) 1557
AfiI CCNNNNNNNGG 4 cut(s) 256, 1667, 2516, 2802
AflII CTTAAG 1 cut(s) 1738
AflIII ACRYGT 2 cut(s) 2550, 2610
AhdI GACNNNNNGTC 1 cut(s) 241
AhlI ACTAGT 1 cut(s) 1685
AjiI CACGTC 1 cut(s) 2551
AjnI CCWGG 2 cut(s) 190, 2245
Alw26I GTCTC 2 cut(s) 868, 2761
AlwI GGATC 2 cut(s) 2573, 2678
AlwNI CAGNNNCTG 1 cut(s) 1076
AoxI GGCC 3 cut(s) 188, 1072, 2597
ApeKI GCWGC 1 cut(s) 2712
ApoI RAATTY 5 cut(s) 740, 917, 1966, 2007, 2467
AseI ATTAAT 1 cut(s) 2724
Asp700I GAANNNNTTC 4 cut(s) 430, 669, 689, 1770
Asp718I GGTACC 1 cut(s) 2436
AspLEI GCGC 1 cut(s) 2842
AspS9I GGNCC 3 cut(s) 235, 1073, 1364
AsuC2I CCSGG 2 cut(s) 1963, 2731
AsuHPI GGTGA 5 cut(s) 254, 1546, 1792, 1841, 2429
AsuNHI GCTAGC 1 cut(s) 112
AvaII GGWCC 2 cut(s) 235, 1364
BalI TGGCCA 1 cut(s) 190
BanI GGYRCC 2 cut(s) 2109, 2436
BanII GRGCYC 2 cut(s) 645, 2254
BarI GAAGNNNNNNTAC 4 cut(s) 2037, 2069, 2205, 2237
BbvI GCAGC 1 cut(s) 2724
BccI CCATC 8 cut(s) 568, 611, 1162, 1453, 1643, 2022, 2501, 2615
BceAI ACGGC 1 cut(s) 1730
BciT130I CCWGG 2 cut(s) 192, 2247
BciVI GTATCC 1 cut(s) 1035
BclI TGATCA 1 cut(s) 2761
BcnI CCSGG 2 cut(s) 1963, 2731
BcoDI GTCTC 2 cut(s) 868, 2761
BcuI ACTAGT 1 cut(s) 1685
BfmI CTRYAG 2 cut(s) 202, 1761
BfrI CTTAAG 1 cut(s) 1738
BfuAI ACCTGC 1 cut(s) 2640
BfuI GTATCC 1 cut(s) 1035
BglII AGATCT 1 cut(s) 1930
BisI GCNGC 1 cut(s) 2713
BlsI GCNGC 1 cut(s) 2714
BmcAI AGTACT 2 cut(s) 22, 2046
Bme1390I CCNGG 4 cut(s) 192, 1963, 2247, 2731
Bme18I GGWCC 2 cut(s) 235, 1364
BmeRI GACNNNNNGTC 1 cut(s) 241
BmgBI CACGTC 1 cut(s) 2551
BmgT120I GGNCC 3 cut(s) 235, 1073, 1364
BmiI GGNNCC 5 cut(s) 1366, 2111, 2253, 2438, 2491
BmrFI CCNGG 4 cut(s) 192, 1963, 2247, 2731
BmrI ACTGGG 1 cut(s) 536
BmsI GCATC 5 cut(s) 156, 1500, 1582, 1742, 2898
BmtI GCTAGC 1 cut(s) 116
BmuI ACTGGG 1 cut(s) 536
BplI GAGNNNNNCTC 2 cut(s) 1920, 1952
BpmI CTGGAG 2 cut(s) 224, 2493
Bpu10I CCTNAGC 1 cut(s) 152
BpuEI CTTGAG 2 cut(s) 239, 307
BpuMI CCSGG 2 cut(s) 1963, 2731
Bsa29I ATCGAT 2 cut(s) 1769, 2151
BsaBI GATNNNNATC 1 cut(s) 828
BsaHI GRCGYC 1 cut(s) 1557
BsaJI CCNNGG 5 cut(s) 142, 1407, 1775, 1961, 2246
BsaWI WCCGGW 2 cut(s) 2112, 2530
BsaXI ACNNNNNCTCC 2 cut(s) 541, 571
Bsc4I CCNNNNNNNGG 4 cut(s) 256, 1667, 2516, 2802
Bse1I ACTGG 5 cut(s) 241, 531, 550, 772, 2687
Bse3DI GCAATG 4 cut(s) 107, 1478, 2295, 2796
Bse8I GATNNNNATC 1 cut(s) 828
BseBI CCWGG 2 cut(s) 192, 2247
BseCI ATCGAT 2 cut(s) 1769, 2151
BseDI CCNNGG 5 cut(s) 142, 1407, 1775, 1961, 2246
BseJI GATNNNNATC 1 cut(s) 828
BseLI CCNNNNNNNGG 4 cut(s) 256, 1667, 2516, 2802
BseMI GCAATG 4 cut(s) 107, 1478, 2295, 2796
BseMII CTCAG 5 cut(s) 209, 310, 750, 927, 1324
BseNI ACTGG 5 cut(s) 241, 531, 550, 772, 2687
BseRI GAGGAG 2 cut(s) 99, 1230
BseXI GCAGC 1 cut(s) 2724
BseYI CCCAGC 1 cut(s) 412
BsgI GTGCAG 2 cut(s) 1674, 2618
Bsh1236I CGCG 2 cut(s) 999, 2842
BshFI GGCC 3 cut(s) 190, 1074, 2599
BshNI GGYRCC 2 cut(s) 2109, 2436
BshVI ATCGAT 2 cut(s) 1769, 2151
BsiSI CCGG 4 cut(s) 1963, 2113, 2531, 2730
BslFI GGGAC 1 cut(s) 1350
BslI CCNNNNNNNGG 4 cut(s) 256, 1667, 2516, 2802
BsmAI GTCTC 2 cut(s) 868, 2761
BsmFI GGGAC 1 cut(s) 1350
BsmI GAATGC 4 cut(s) 195, 1005, 2410, 2789
BsnI GGCC 3 cut(s) 190, 1074, 2599
Bsp1286I GDGCHC 2 cut(s) 645, 2254
Bsp143I GATC 7 cut(s) 333, 963, 1886, 1930, 2565, 2683, 2761
BspACI CCGC 2 cut(s) 999, 1809
BspANI GGCC 3 cut(s) 190, 1074, 2599
BspCNI CTCAG 5 cut(s) 210, 309, 749, 928, 1323
BspDI ATCGAT 2 cut(s) 1769, 2151
BspFNI CGCG 2 cut(s) 999, 2842
BspLI GGNNCC 5 cut(s) 1366, 2111, 2253, 2438, 2491
BspMAI CTGCAG 2 cut(s) 206, 1765
BspMI ACCTGC 1 cut(s) 2640
BspOI GCTAGC 1 cut(s) 116
BspPI GGATC 2 cut(s) 2573, 2678
BspT107I GGYRCC 2 cut(s) 2109, 2436
BspTI CTTAAG 1 cut(s) 1738
BsrDI GCAATG 4 cut(s) 107, 1478, 2295, 2796
BsrI ACTGG 5 cut(s) 241, 531, 550, 772, 2687
BssECI CCNNGG 5 cut(s) 142, 1407, 1775, 1961, 2246
BssMI GATC 7 cut(s) 333, 963, 1886, 1930, 2565, 2683, 2761
BssNAI GTATAC 1 cut(s) 1730
BssNI GRCGYC 1 cut(s) 1557
BssT1I CCWWGG 3 cut(s) 142, 1407, 1775
Bst1107I GTATAC 1 cut(s) 1730
Bst2UI CCWGG 2 cut(s) 192, 2247
Bst4CI ACNGT 3 cut(s) 229, 1870, 2228
Bst6I CTCTTC 4 cut(s) 76, 583, 630, 871
BstACI GRCGYC 1 cut(s) 1557
BstAFI CTTAAG 1 cut(s) 1738
BstAPI GCANNNNNTGC 1 cut(s) 201
BstC8I GCNNGC 3 cut(s) 105, 114, 251
BstDEI CTNAG 8 cut(s) 152, 218, 296, 736, 936, 1181, 1283, 1310
BstEII GGTNACC 1 cut(s) 260
BstFNI CGCG 2 cut(s) 999, 2842
BstHHI GCGC 1 cut(s) 2842
BstKTI GATC 7 cut(s) 336, 966, 1889, 1933, 2568, 2686, 2764
BstMAI GTCTC 2 cut(s) 868, 2761
BstMBI GATC 7 cut(s) 333, 963, 1886, 1930, 2565, 2683, 2761
BstMWI GCNNNNNNNGC 7 cut(s) 109, 113, 122, 153, 201, 2839, 2917
BstNI CCWGG 2 cut(s) 192, 2247
BstNSI RCATGY 1 cut(s) 2614
BstPI GGTNACC 1 cut(s) 260
BstSCI CCNGG 4 cut(s) 190, 1961, 2245, 2729
BstSFI CTRYAG 2 cut(s) 202, 1761
BstUI CGCG 2 cut(s) 999, 2842
BstV1I GCAGC 1 cut(s) 2724
BstX2I RGATCY 2 cut(s) 1930, 2565
BstXI CCANNNNNNTGG 4 cut(s) 617, 695, 767, 1361
BstYI RGATCY 2 cut(s) 1930, 2565
BstZ17I GTATAC 1 cut(s) 1730
Bsu15I ATCGAT 2 cut(s) 1769, 2151
BsuI GTATCC 1 cut(s) 1035
BsuRI GGCC 3 cut(s) 190, 1074, 2599
BsuTUI ATCGAT 2 cut(s) 1769, 2151
BtrI CACGTC 1 cut(s) 2551
BtsI GCAGTG 3 cut(s) 199, 596, 2043
BtsIMutI CAGTG 6 cut(s) 199, 524, 596, 700, 2043, 2694
BveI ACCTGC 1 cut(s) 2640
Cac8I GCNNGC 3 cut(s) 105, 114, 251
CaiI CAGNNNCTG 1 cut(s) 1076
CfoI GCGC 1 cut(s) 2842
Cfr13I GGNCC 3 cut(s) 235, 1073, 1364
ClaI ATCGAT 2 cut(s) 1769, 2151
CseI GACGC 2 cut(s) 1565, 2465
CviAII CATG 7 cut(s) 159, 682, 784, 1702, 1890, 2462, 2611
DdeI CTNAG 8 cut(s) 152, 218, 296, 736, 936, 1181, 1283, 1310
DpnI GATC 7 cut(s) 335, 965, 1888, 1932, 2567, 2685, 2763
DpnII GATC 7 cut(s) 333, 963, 1886, 1930, 2565, 2683, 2761
DriI GACNNNNNGTC 1 cut(s) 241
EaeI YGGCCR 1 cut(s) 188
Eam1104I CTCTTC 4 cut(s) 76, 583, 630, 871
Eam1105I GACNNNNNGTC 1 cut(s) 241
EarI CTCTTC 4 cut(s) 76, 583, 630, 871
Eco130I CCWWGG 3 cut(s) 142, 1407, 1775
Eco24I GRGCYC 2 cut(s) 645, 2254
Eco32I GATATC 1 cut(s) 1057
Eco47I GGWCC 2 cut(s) 235, 1364
Eco57I CTGAAG 3 cut(s) 57, 310, 353
Eco91I GGTNACC 1 cut(s) 260
EcoO109I RGGNCCY 1 cut(s) 1073
EcoO65I GGTNACC 1 cut(s) 260
EcoRI GAATTC 1 cut(s) 2007
EcoRII CCWGG 2 cut(s) 190, 2245
EcoRV GATATC 1 cut(s) 1057
EcoT14I CCWWGG 3 cut(s) 142, 1407, 1775
EcoT38I GRGCYC 2 cut(s) 645, 2254
ErhI CCWWGG 3 cut(s) 142, 1407, 1775
FaeI CATG 7 cut(s) 162, 685, 787, 1705, 1893, 2465, 2614
FalI AAGNNNNNCTT 2 cut(s) 1497, 1529
FaqI GGGAC 1 cut(s) 1350
FatI CATG 7 cut(s) 158, 681, 783, 1701, 1889, 2461, 2610
FauI CCCGC 1 cut(s) 1802
FauNDI CATATG 3 cut(s) 444, 1924, 2542
FbaI TGATCA 1 cut(s) 2761
FblI GTMKAC 2 cut(s) 1729, 1877
Fnu4HI GCNGC 1 cut(s) 2713
FriOI GRGCYC 2 cut(s) 645, 2254
Fsp4HI GCNGC 1 cut(s) 2713
GlaI GCGC 1 cut(s) 2841
GluI GCNGC 1 cut(s) 2713
GsaI CCCAGC 1 cut(s) 416
GsuI CTGGAG 2 cut(s) 224, 2493
HaeIII GGCC 3 cut(s) 190, 1074, 2599
HapII CCGG 4 cut(s) 1963, 2113, 2531, 2730
HgaI GACGC 2 cut(s) 1565, 2465
HhaI GCGC 1 cut(s) 2842
Hin1I GRCGYC 1 cut(s) 1557
Hin1II CATG 7 cut(s) 162, 685, 787, 1705, 1893, 2465, 2614
Hin6I GCGC 1 cut(s) 2840
HinP1I GCGC 1 cut(s) 2840
HincII GTYRAC 2 cut(s) 877, 1878
HindII GTYRAC 2 cut(s) 877, 1878
HindIII AAGCTT 3 cut(s) 365, 508, 2175
HpaI GTTAAC 1 cut(s) 877
HpaII CCGG 4 cut(s) 1963, 2113, 2531, 2730
HphI GGTGA 5 cut(s) 254, 1546, 1792, 1841, 2429
Hpy166II GTNNAC 7 cut(s) 877, 1097, 1730, 1878, 2293, 2586, 2616
Hpy188I TCNGA 9 cut(s) 281, 739, 993, 1125, 1420, 1450, 2286, 2628, 2766
Hpy188III TCNNGA 9 cut(s) 1544, 1589, 1678, 2018, 2064, 2095, 2321, 2510, 2755
Hpy8I GTNNAC 7 cut(s) 877, 1097, 1730, 1878, 2293, 2586, 2616
Hpy99I CGWCG 2 cut(s) 2459, 2552
HpyAV CCTTC 2 cut(s) 1484, 1499
HpyCH4III ACNGT 3 cut(s) 229, 1870, 2228
HpyCH4IV ACGT 2 cut(s) 2550, 2875
HpyF10VI GCNNNNNNNGC 7 cut(s) 109, 113, 122, 153, 201, 2839, 2917
HpyF3I CTNAG 8 cut(s) 152, 218, 296, 736, 936, 1181, 1283, 1310
HpySE526I ACGT 2 cut(s) 2550, 2875
Hsp92I GRCGYC 1 cut(s) 1557
Hsp92II CATG 7 cut(s) 162, 685, 787, 1705, 1893, 2465, 2614
HspAI GCGC 1 cut(s) 2840
KpnI GGTACC 1 cut(s) 2440
Ksp22I TGATCA 1 cut(s) 2761
KspAI GTTAAC 1 cut(s) 877
Kzo9I GATC 7 cut(s) 333, 963, 1886, 1930, 2565, 2683, 2761
LmnI GCTCC 3 cut(s) 476, 2257, 2512
Lsp1109I GCAGC 1 cut(s) 2724
LweI GCATC 5 cut(s) 156, 1500, 1582, 1742, 2898
MaeII ACGT 2 cut(s) 2550, 2875
MaeIII GTNAC 7 cut(s) 223, 260, 1326, 1349, 1565, 2378, 2417
MalI GATC 7 cut(s) 335, 965, 1888, 1932, 2567, 2685, 2763
MboI GATC 7 cut(s) 333, 963, 1886, 1930, 2565, 2683, 2761
MfeI CAATTG 5 cut(s) 92, 1011, 1089, 1797, 1910
MflI RGATCY 2 cut(s) 1930, 2565
MhlI GDGCHC 2 cut(s) 645, 2254
MlsI TGGCCA 1 cut(s) 190
MluNI TGGCCA 1 cut(s) 190
MlyI GAGTC 3 cut(s) 231, 947, 1240
MmeI TCCRAC 3 cut(s) 454, 1482, 1509
Mox20I TGGCCA 1 cut(s) 190
MroXI GAANNNNTTC 4 cut(s) 430, 669, 689, 1770
MscI TGGCCA 1 cut(s) 190
MslI CAYNNNNRTG 1 cut(s) 2640
Msp20I TGGCCA 1 cut(s) 190
MspA1I CMGCKG 2 cut(s) 1138, 2234
MspCI CTTAAG 1 cut(s) 1738
MspI CCGG 4 cut(s) 1963, 2113, 2531, 2730
MspR9I CCNGG 4 cut(s) 192, 1963, 2247, 2731
MunI CAATTG 5 cut(s) 92, 1011, 1089, 1797, 1910
Mva1269I GAATGC 4 cut(s) 195, 1005, 2410, 2789
MvaI CCWGG 2 cut(s) 192, 2247
MvnI CGCG 2 cut(s) 999, 2842
MwoI GCNNNNNNNGC 7 cut(s) 109, 113, 122, 153, 201, 2839, 2917
NciI CCSGG 2 cut(s) 1963, 2731
NdeI CATATG 3 cut(s) 444, 1924, 2542
NdeII GATC 7 cut(s) 333, 963, 1886, 1930, 2565, 2683, 2761
NheI GCTAGC 1 cut(s) 112
NlaIII CATG 7 cut(s) 162, 685, 787, 1705, 1893, 2465, 2614
NlaIV GGNNCC 5 cut(s) 1366, 2111, 2253, 2438, 2491
NmuCI GTSAC 4 cut(s) 223, 260, 1326, 2417
NspI RCATGY 1 cut(s) 2614
PciI ACATGT 1 cut(s) 2610
PctI GAATGC 4 cut(s) 195, 1005, 2410, 2789
PdmI GAANNNNTTC 4 cut(s) 430, 669, 689, 1770
PflMI CCANNNNNTGG 1 cut(s) 2516
PfoI TCCNGGA 1 cut(s) 2729
PkrI GCNGC 1 cut(s) 2714
PleI GAGTC 3 cut(s) 230, 946, 1239
PpsI GAGTC 3 cut(s) 230, 946, 1239
PscI ACATGT 1 cut(s) 2610
PshBI ATTAAT 1 cut(s) 2724
Psp6I CCWGG 2 cut(s) 190, 2245
PspEI GGTNACC 1 cut(s) 260
PspFI CCCAGC 1 cut(s) 412
PspGI CCWGG 2 cut(s) 190, 2245
PspN4I GGNNCC 5 cut(s) 1366, 2111, 2253, 2438, 2491
PspPI GGNCC 3 cut(s) 235, 1073, 1364
PstI CTGCAG 2 cut(s) 206, 1765
PstNI CAGNNNCTG 1 cut(s) 1076
PsuI RGATCY 2 cut(s) 1930, 2565
PvuII CAGCTG 2 cut(s) 1138, 2234
RseI CAYNNNNRTG 1 cut(s) 2640
SalI GTCGAC 1 cut(s) 1876
SatI GCNGC 1 cut(s) 2713
Sau3AI GATC 7 cut(s) 333, 963, 1886, 1930, 2565, 2683, 2761
Sau96I GGNCC 3 cut(s) 235, 1073, 1364
ScaI AGTACT 2 cut(s) 22, 2046
SchI GAGTC 3 cut(s) 231, 947, 1240
ScrFI CCNGG 4 cut(s) 192, 1963, 2247, 2731
SduI GDGCHC 2 cut(s) 645, 2254
SfaNI GCATC 5 cut(s) 156, 1500, 1582, 1742, 2898
SfcI CTRYAG 2 cut(s) 202, 1761
SinI GGWCC 2 cut(s) 235, 1364
SmiMI CAYNNNNRTG 1 cut(s) 2640
SmlI CTYRAG 3 cut(s) 254, 286, 1738
SmoI CTYRAG 3 cut(s) 254, 286, 1738
SpeI ACTAGT 1 cut(s) 1685
SsiI CCGC 2 cut(s) 999, 1809
SspI AATATT 2 cut(s) 651, 2119
StyD4I CCNGG 4 cut(s) 190, 1961, 2245, 2729
StyI CCWWGG 3 cut(s) 142, 1407, 1775
TaaI ACNGT 3 cut(s) 229, 1870, 2228
TaiI ACGT 2 cut(s) 2553, 2878
TaqI TCGA 8 cut(s) 35, 208, 663, 1439, 1769, 1877, 2151, 2454
TatI WGTACW 3 cut(s) 20, 2044, 2890
TscAI CASTG 6 cut(s) 206, 531, 603, 700, 2043, 2694
TseFI GTSAC 4 cut(s) 223, 260, 1326, 2417
TseI GCWGC 1 cut(s) 2712
Tsp45I GTSAC 4 cut(s) 223, 260, 1326, 2417
TspGWI ACGGA 2 cut(s) 1471, 1683
TspRI CASTG 6 cut(s) 206, 531, 603, 700, 2043, 2694
Van91I CCANNNNNTGG 1 cut(s) 2516
Vha464I CTTAAG 1 cut(s) 1738
VpaK11BI GGWCC 2 cut(s) 235, 1364
VspI ATTAAT 1 cut(s) 2724
XapI RAATTY 5 cut(s) 740, 917, 1966, 2007, 2467
XceI RCATGY 1 cut(s) 2614
XcmI CCANNNNNNNNNTGG 2 cut(s) 2482, 2842
XmiI GTMKAC 2 cut(s) 1729, 1877
XmnI GAANNNNTTC 4 cut(s) 430, 669, 689, 1770
ZrmI AGTACT 2 cut(s) 22, 2046
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.