Rw1G023260
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
49000936 .. 49004148
3213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G023260.1

Sequence Viewer

Length: 3087 bp
ATGGGGGTTTTGGTTCTGAATCTGCTTTTGATATACTCAGTTCTTAATCCCATGTTCATTTTCAGTTGTAGTTCTATGCCTTTGAACCATCTCCTGACCATGACGCTCGGAGGGAATGAGACGGATAGGCTTGCATTGCTAGCCATCAAAGCTAACATACAGCACGATCCCAACCAGGTCATGAGCACGTGGAATGCGTCCATTCACTTCTGCTCGTGGTACGGTGTAACCTGCAGTCGAAGGCATCACCAGAGGGTCACAATGCTGGACCTCAAATCACAAGGCTTGTCCGGCTTCATATCCCCACACATAGGAAATCTAAGTTTCCTTAGGGAGATGTACCTCTATAGCAATAACTTCACTCATGAAATTCCTCCAGAAATTGGGCGTTTGCGTAGGTTGCAGGTATTACATCTAGCTAATAATTCATTTACTGGCCATATTCCTACCAACATATCCAATTGCTTCAATCTTACCTATCTCAGTTTCGGGTTCAACAAGCTGGTTGGTGAAATTCCTTCCCAACTCGGTTTCTTGTCTAAGCTTCAGACAATTGATTTCGACCATAATAATTTTACTGGAGAATTCCCTCCTTCCTTTGGGAATCTTTCATCTCTTACGCAGCTCAGTGCAACTGTTAACAACTTGGTGGGTAGCATCCCTACGTCTCTAGGCCAATTGAAAAAATTAACTTTCTTTTCGTTGGGCGGTAATATGTTGTCTGGTTCCATGCCTCCCTCCATTTTTAACCTATCTGCTATTGTTTCTTTTTCCATACTACAAAACCAAATTCAAGGAAATCTTCCCTTAAACTTCAGTGATGCTTTTCCAGTCATCAAGGTCTTTAGCATTTCGGGAAACAAATTTATTGGAGGCATTCCAGTGTCAATATCCAATGCAACAAGTCTAGTGTCCTTCGATGTCTCCCGGAACAATCTAACAGGACGAGTGCCCAGTTTGCTACTACTTCATAACCTCATGGTTTTCTCAGTTGCAGATAATCATCTTGGAAGTGGTAAAGATGGTGACTTGAGTTTTGTCTCGGAAATGATCAATGCCACACAATTAATGTGGTTGTTTTTAGCCTACAACAATTTCGGAGGGACATTGCCCACATCAATATCCAATCTCTCAACCAATCTTGAACAGCTTTGGGTTCAAGGAAACAACCTACATGGTAGCATCCCAAAGTTGGGGAATCTTGTCAACTTGCAATCATTGTCTATGGAGGAAAACTCCTTCACAGGCAGCATCCCCACAGACATTGGGAAGCTTATAAGGCTTGGGGCATTGTTTCTTAATAGCAACAAACTATCAGGGAGCCTTCCATCCTCTCTTGGAAATTTAACCATGTTAACCCTTCTTTACTTGCAAAGAAATAATCTTAATGGCACCATCCCTTTAAGCCTTGGGCAATGCCAGGGGTTACTAGAGTTGGATCTTTCTCAAAATAACATTGATGGCACAATACCCCAACAACTGCCTATTGGCCTCACTTTTTTATCAATTTCTTTCAACTTGTCAAAAAATCACTTTTATGGTTCTCTCCCATTGGAGATAGGAAATTTGAAGAATCTAGGTGCATTGGATGTTTCAGACAACTTGTTATCTGGAGAACTTCCTCCTGGCCTCGGTAGTTGTAAGAGTTTAGAAGTCTTACACTTGCAAGGTAACTTATTCCATGGGCTCATTCCTTCATCTATGAGTGAGTTGAGAGGGATTCGAGATTTAGACCTTTCTCGCAACAATTTTTCAGGAGATATTCCACATTTCCTAGAGGGCCTTGGTAACTTGCAAAATCTGAACTTGTCCTTCAATGATTTTTGGGGAGCAGTACCAATTGGGGGTGTTTTTAAGAATGTAAGTGCCAATTCAGTTGTGGGAAACATTGGGCTTTGCAGCGTCACTGCTAATCTTCAACTTCCTTTGTGCAAGTCTAAGGAGTCTAAAGGAGAAGGATTGTCTCGTAGAATGAAAATAATGATCTCTTTAGTATCCGGGTTTACTCTTTTGGGAATTGTTGTGGTGATCTATATTCTATTTCGTTGTTCAAGAAAGAAAATGAAAGGAACTGAATTGAGCACTTTGGGGAACTCTATGTTGCAAGTTTCATATGCTAGTCTCCTAAACGCTACTAATGGGTTCTCCTCAACTAATTTGATTGGCATTGGCGCTTTTGGGTCTGTGTACAAAGGAATTCTTGATGATGATGCAACTATTGTTGCTGTGAAGGTGTTTAACATGTTACATCGGGGTGCTTCTAAGAGTTTCATCTCCGAATGTGAGGCATTAAGAAACATCAGACATCGAAATCTGGTCAAGATTTTAACTGCATGCTCAAGTATTGATTTCAATGGCAATGATTTTAAGGCTCTTGTTTACGAGTTCATGGACAATGGGAGCTTAGAGGATTGGTTGCATCCATCTACTGGAACTGAAGAGCTAACAGAAGCACCCAAAAGTTTAAATCTAGTTCAAAGGGTCGACATCGCCATTGATGTTGCTAGTGCATTGGATTATCTTCACAACCATTGTGAAACACCGATTGTTCATTGTGATCTCAAGCCAAGTAATGTTCTTTTGGACAGTGATCTGACTGGACATGTTTCTGACTTTGGGCTATCAAGGTTTCTAACAACACCAACCACTAATGTGCCTGAAAATCAGTCAAGCTCCATTGGAATCAGAGGATCGGTTGGTTATGCTGCACCAGAGCATGGTATGGGAAGTGAGGTATCTGTATATGGGGATGTCTACAGCTTTGGCATTCTTTTGTTAGAAATGTTTACTGGGAATAGACCTACTGATCACATGTTTAGTGATGGCTTGAATCTTCATAATTATGTGAAGACAGCTCTCCCTGAATGTGTTTCAGAGATTTCAAAATCACTAGCTCTTCAAGAAGGCACCGCCAGCGTCGTTGAAGATCATAGACAATTGAGTGTTACACCACAGAAAATTGAAGAGTGCTTGACTTTGATATTTGGAATTGGGATTGCATGTTCTACTGACTCCCCAACAAACCGAAAGGATATCAGTAATGTTGCAGCTGAATTGAAGTCCATTAGGAAAAATCTACTTGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1028

Amino Acids

111.64

Weight (kDa)

6.22

Isoelectric Point (pI)

33.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 79 1.3e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 150 - 234 4.1e-07 Leucine-rich repeat region
LRR_14 PF23598 392 - 483 4.4e-06 Leucine-rich repeat region
LRR_14 PF23598 513 - 602 1.5e-07 Leucine-rich repeat region
LRR_8 PF13855 549 - 608 5.4e-08 Leucine rich repeat
Pkinase PF00069 717 - 942 1e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 719 - 939 5.5e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1277
Acc36I ACCTGC 2 cut(s) 239, 394
AccB1I GGYRCC 2 cut(s) 1391, 2906
AccB7I CCANNNNNTGG 3 cut(s) 383, 2429, 2717
AccI GTMKAC 2 cut(s) 2484, 2754
AciI CCGC 2 cut(s) 708, 2910
AclWI GGATC 3 cut(s) 161, 1446, 2698
AcoI YGGCCR 1 cut(s) 436
AcsI RAATTY 8 cut(s) 369, 513, 584, 789, 863, 1342, 1564, 2196
AcuI CTGAAG 3 cut(s) 530, 799, 2457
AcvI CACGTG 1 cut(s) 189
AfaI GTAC 4 cut(s) 221, 341, 1836, 2189
AfiI CCNNNNNNNGG 9 cut(s) 311, 383, 599, 1192, 1193, 1631, 1844, 2429, 2717
AflIII ACRYGT 3 cut(s) 2241, 2602, 2811
AjnI CCWGG 3 cut(s) 174, 1419, 1624
AleI CACNNNNGTG 1 cut(s) 2651
AloI GAACNNNNNNTCC 2 cut(s) 2986, 3018
Alw21I GWGCWC 2 cut(s) 188, 2084
Alw26I GTCTC 6 cut(s) 113, 672, 928, 1045, 1968, 2126
AlwI GGATC 3 cut(s) 161, 1446, 2698
AoxI GGCC 5 cut(s) 436, 673, 1489, 1627, 1780
ApeKI GCWGC 5 cut(s) 622, 1248, 1899, 2705, 3047
ApoI RAATTY 8 cut(s) 369, 513, 584, 789, 863, 1342, 1564, 2196
ArsI GACNNNNNNTTYG 2 cut(s) 1019, 1051
AseI ATTAAT 1 cut(s) 1067
AspLEI GCGC 1 cut(s) 2174
AspS9I GGNCC 2 cut(s) 268, 1780
AsuC2I CCSGG 2 cut(s) 928, 1999
AsuHPI GGTGA 4 cut(s) 239, 521, 1037, 2038
AsuNHI GCTAGC 1 cut(s) 139
AvaII GGWCC 1 cut(s) 268
AxyI CCTNAGG 1 cut(s) 329
BaeGI GKGCMC 1 cut(s) 954
BalI TGGCCA 1 cut(s) 438
BanI GGYRCC 2 cut(s) 1391, 2906
BanII GRGCYC 1 cut(s) 1689
BauI CACGAG 1 cut(s) 214
BbrPI CACGTG 1 cut(s) 189
BbsI GAAGAC 1 cut(s) 2855
Bbv12I GWGCWC 2 cut(s) 188, 2084
BbvI GCAGC 5 cut(s) 634, 1260, 1911, 2692, 3059
BccI CCATC 8 cut(s) 96, 152, 1016, 1336, 1403, 1454, 2431, 2816
BciT130I CCWGG 3 cut(s) 176, 1421, 1626
BciVI GTATCC 1 cut(s) 2005
BclI TGATCA 2 cut(s) 1050, 2806
BcnI CCSGG 2 cut(s) 928, 1999
BcoDI GTCTC 6 cut(s) 113, 672, 928, 1045, 1968, 2126
BfmI CTRYAG 3 cut(s) 232, 346, 2755
BfoI RGCGCY 1 cut(s) 2175
BfuAI ACCTGC 2 cut(s) 239, 394
BfuI GTATCC 1 cut(s) 2005
BisI GCNGC 5 cut(s) 623, 1249, 1900, 2706, 3048
BlsI GCNGC 5 cut(s) 624, 1250, 1901, 2707, 3049
Bme1390I CCNGG 5 cut(s) 176, 928, 1421, 1626, 1999
Bme18I GGWCC 1 cut(s) 268
BmgT120I GGNCC 2 cut(s) 268, 1780
BmiI GGNNCC 4 cut(s) 727, 1322, 1393, 2908
BmrFI CCNGG 5 cut(s) 176, 928, 1421, 1626, 1999
BmrI ACTGGG 2 cut(s) 948, 2799
BmsI GCATC 7 cut(s) 253, 666, 811, 1191, 1260, 2200, 2428
BmtI GCTAGC 1 cut(s) 143
BmuI ACTGGG 2 cut(s) 948, 2799
BpiI GAAGAC 1 cut(s) 2855
BplI GAGNNNNNCTC 2 cut(s) 1220, 1252
BpmI CTGGAG 3 cut(s) 360, 600, 1632
BpuEI CTTGAG 3 cut(s) 1051, 2323, 2546
BpuMI CCSGG 2 cut(s) 928, 1999
BsaAI YACGTR 1 cut(s) 189
BsaBI GATNNNNATC 1 cut(s) 1002
BsaJI CCNNGG 5 cut(s) 1408, 1420, 1630, 1681, 1783
Bsc4I CCNNNNNNNGG 9 cut(s) 311, 383, 599, 1192, 1193, 1631, 1844, 2429, 2717
Bse1I ACTGG 8 cut(s) 439, 583, 830, 881, 954, 2434, 2602, 2794
Bse21I CCTNAGG 1 cut(s) 329
Bse3DI GCAATG 4 cut(s) 134, 1106, 1421, 2365
Bse8I GATNNNNATC 1 cut(s) 1002
BseBI CCWGG 3 cut(s) 176, 1421, 1626
BseDI CCNNGG 5 cut(s) 1408, 1420, 1630, 1681, 1783
BseGI GGATG 8 cut(s) 657, 1182, 1251, 1328, 1395, 1594, 2419, 2755
BseJI GATNNNNATC 1 cut(s) 1002
BseLI CCNNNNNNNGG 9 cut(s) 311, 383, 599, 1192, 1193, 1631, 1844, 2429, 2717
BseMI GCAATG 4 cut(s) 134, 1106, 1421, 2365
BseMII CTCAG 4 cut(s) 51, 496, 640, 1002
BseNI ACTGG 8 cut(s) 439, 583, 830, 881, 954, 2434, 2602, 2794
BseRI GAGGAG 1 cut(s) 2137
BseSI GKGCMC 1 cut(s) 954
BseXI GCAGC 5 cut(s) 634, 1260, 1911, 2692, 3059
BsgI GTGCAG 1 cut(s) 2691
BshFI GGCC 5 cut(s) 438, 675, 1491, 1629, 1782
BshNI GGYRCC 2 cut(s) 1391, 2906
BsiHKAI GWGCWC 2 cut(s) 188, 2084
BsiSI CCGG 3 cut(s) 291, 928, 1998
BslFI GGGAC 1 cut(s) 1117
BslI CCNNNNNNNGG 9 cut(s) 311, 383, 599, 1192, 1193, 1631, 1844, 2429, 2717
BsmAI GTCTC 6 cut(s) 113, 672, 928, 1045, 1968, 2126
BsmBI CGTCTC 2 cut(s) 113, 672
BsmFI GGGAC 1 cut(s) 1117
BsmI GAATGC 3 cut(s) 199, 876, 2766
BsnI GGCC 5 cut(s) 438, 675, 1491, 1629, 1782
Bsp1286I GDGCHC 4 cut(s) 188, 954, 1689, 2084
Bsp1407I TGTACA 1 cut(s) 2187
Bsp19I CCATGG 1 cut(s) 1681
BspACI CCGC 2 cut(s) 708, 2910
BspANI GGCC 5 cut(s) 438, 675, 1491, 1629, 1782
BspCNI CTCAG 4 cut(s) 50, 495, 639, 1001
BspHI TCATGA 2 cut(s) 180, 364
BspLI GGNNCC 4 cut(s) 727, 1322, 1393, 2908
BspMAI CTGCAG 1 cut(s) 236
BspMI ACCTGC 2 cut(s) 239, 394
BspOI GCTAGC 1 cut(s) 143
BspPI GGATC 3 cut(s) 161, 1446, 2698
BspQI GCTCTTC 2 cut(s) 2433, 2901
BspT107I GGYRCC 2 cut(s) 1391, 2906
BsrDI GCAATG 4 cut(s) 134, 1106, 1421, 2365
BsrGI TGTACA 1 cut(s) 2187
BsrI ACTGG 8 cut(s) 439, 583, 830, 881, 954, 2434, 2602, 2794
BssECI CCNNGG 5 cut(s) 1408, 1420, 1630, 1681, 1783
BssSI CACGAG 1 cut(s) 214
BssT1I CCWWGG 3 cut(s) 1408, 1681, 1783
Bst2BI CACGAG 1 cut(s) 214
Bst2UI CCWGG 3 cut(s) 176, 1421, 1626
Bst4CI ACNGT 3 cut(s) 224, 637, 2588
Bst6I CTCTTC 3 cut(s) 2433, 2901, 2958
BstAUI TGTACA 1 cut(s) 2187
BstBAI YACGTR 1 cut(s) 189
BstC8I GCNNGC 4 cut(s) 132, 141, 2335, 2914
BstDSI CCRYGG 1 cut(s) 1681
BstF5I GGATG 8 cut(s) 657, 1182, 1251, 1328, 1395, 1594, 2419, 2755
BstH2I RGCGCY 1 cut(s) 2175
BstHHI GCGC 1 cut(s) 2174
BstMAI GTCTC 6 cut(s) 113, 672, 928, 1045, 1968, 2126
BstMWI GCNNNNNNNGC 8 cut(s) 136, 140, 149, 291, 400, 958, 1279, 2913
BstNI CCWGG 3 cut(s) 176, 1421, 1626
BstNSI RCATGY 5 cut(s) 2245, 2337, 2606, 2815, 3003
BstSCI CCNGG 5 cut(s) 174, 926, 1419, 1624, 1997
BstSFI CTRYAG 3 cut(s) 232, 346, 2755
BstSLI GKGCMC 1 cut(s) 954
BstV1I GCAGC 5 cut(s) 634, 1260, 1911, 2692, 3059
BstV2I GAAGAC 1 cut(s) 2855
BstX2I RGATCY 1 cut(s) 1438
BstYI RGATCY 1 cut(s) 1438
Bsu36I CCTNAGG 1 cut(s) 329
BsuI GTATCC 1 cut(s) 2005
BsuRI GGCC 5 cut(s) 438, 675, 1491, 1629, 1782
BtgI CCRYGG 1 cut(s) 1681
BtgZI GCGATG 1 cut(s) 2473
BtsCI GGATG 8 cut(s) 657, 1182, 1251, 1328, 1395, 1594, 2419, 2755
BtsI GCAGTG 1 cut(s) 1905
BtsIMutI CAGTG 5 cut(s) 634, 823, 888, 1905, 2593
BveI ACCTGC 2 cut(s) 239, 394
Cac8I GCNNGC 4 cut(s) 132, 141, 2335, 2914
CciI TCATGA 2 cut(s) 180, 364
CfoI GCGC 1 cut(s) 2174
Cfr13I GGNCC 2 cut(s) 268, 1780
CseI GACGC 4 cut(s) 112, 186, 1891, 2905
CsiI ACCWGGT 1 cut(s) 174
Csp6I GTAC 4 cut(s) 220, 340, 1835, 2188
CspCI CAANNNNNGTGG 4 cut(s) 1052, 1087, 1246, 1281
CviQI GTAC 4 cut(s) 220, 340, 1835, 2188
DraI TTTAAA 1 cut(s) 2466
EaeI YGGCCR 1 cut(s) 436
Eam1104I CTCTTC 3 cut(s) 2433, 2901, 2958
EarI CTCTTC 3 cut(s) 2433, 2901, 2958
Eco130I CCWWGG 3 cut(s) 1408, 1681, 1783
Eco24I GRGCYC 1 cut(s) 1689
Eco32I GATATC 1 cut(s) 3034
Eco47I GGWCC 1 cut(s) 268
Eco57I CTGAAG 3 cut(s) 530, 799, 2457
Eco72I CACGTG 1 cut(s) 189
Eco81I CCTNAGG 1 cut(s) 329
EcoO109I RGGNCCY 1 cut(s) 1780
EcoRI GAATTC 2 cut(s) 584, 2196
EcoRII CCWGG 3 cut(s) 174, 1419, 1624
EcoRV GATATC 1 cut(s) 3034
EcoT14I CCWWGG 3 cut(s) 1408, 1681, 1783
EcoT38I GRGCYC 1 cut(s) 1689
ErhI CCWWGG 3 cut(s) 1408, 1681, 1783
Esp3I CGTCTC 2 cut(s) 113, 672
FalI AAGNNNNNCTT 4 cut(s) 786, 818, 2184, 2216
FaqI GGGAC 1 cut(s) 1117
FauNDI CATATG 1 cut(s) 2113
FbaI TGATCA 2 cut(s) 1050, 2806
FblI GTMKAC 2 cut(s) 2484, 2754
Fnu4HI GCNGC 5 cut(s) 623, 1249, 1900, 2706, 3048
FokI GGATG 8 cut(s) 644, 1169, 1238, 1315, 1382, 1601, 2406, 2762
FriOI GRGCYC 1 cut(s) 1689
Fsp4HI GCNGC 5 cut(s) 623, 1249, 1900, 2706, 3048
GlaI GCGC 1 cut(s) 2173
GluI GCNGC 5 cut(s) 623, 1249, 1900, 2706, 3048
GsuI CTGGAG 3 cut(s) 360, 600, 1632
HaeII RGCGCY 1 cut(s) 2175
HaeIII GGCC 5 cut(s) 438, 675, 1491, 1629, 1782
HapII CCGG 3 cut(s) 291, 928, 1998
HgaI GACGC 4 cut(s) 112, 186, 1891, 2905
HhaI GCGC 1 cut(s) 2174
Hin6I GCGC 1 cut(s) 2172
HinP1I GCGC 1 cut(s) 2172
HincII GTYRAC 4 cut(s) 640, 1207, 1356, 2485
HindII GTYRAC 4 cut(s) 640, 1207, 1356, 2485
HindIII AAGCTT 2 cut(s) 542, 1271
HinfI GANTC 9 cut(s) 19, 604, 1198, 1573, 1720, 1943, 2682, 2830, 3011
HpaI GTTAAC 2 cut(s) 640, 1356
HpaII CCGG 3 cut(s) 291, 928, 1998
HphI GGTGA 4 cut(s) 239, 521, 1037, 2038
Hpy166II GTNNAC 9 cut(s) 640, 1207, 1356, 2004, 2188, 2380, 2485, 2755, 2787
Hpy8I GTNNAC 9 cut(s) 640, 1207, 1356, 2004, 2188, 2380, 2485, 2755, 2787
Hpy99I CGWCG 1 cut(s) 2921
HpyCH4III ACNGT 3 cut(s) 224, 637, 2588
HpyCH4IV ACGT 2 cut(s) 188, 665
HpyF10VI GCNNNNNNNGC 8 cut(s) 136, 140, 149, 291, 400, 958, 1279, 2913
HpySE526I ACGT 2 cut(s) 188, 665
HspAI GCGC 1 cut(s) 2172
Ksp22I TGATCA 2 cut(s) 1050, 2806
KspAI GTTAAC 2 cut(s) 640, 1356
LguI GCTCTTC 2 cut(s) 2433, 2901
LmnI GCTCC 4 cut(s) 1320, 1829, 2400, 2678
Lsp1109I GCAGC 5 cut(s) 634, 1260, 1911, 2692, 3059
LweI GCATC 7 cut(s) 253, 666, 811, 1191, 1260, 2200, 2428
MabI ACCWGGT 1 cut(s) 174
MaeII ACGT 2 cut(s) 188, 665
MaeIII GTNAC 9 cut(s) 226, 256, 1025, 1425, 1670, 1787, 1903, 2244, 2944
MfeI CAATTG 5 cut(s) 460, 552, 677, 1839, 2936
MflI RGATCY 1 cut(s) 1438
MhlI GDGCHC 4 cut(s) 188, 954, 1689, 2084
MlsI TGGCCA 1 cut(s) 438
MluNI TGGCCA 1 cut(s) 438
MlyI GAGTC 2 cut(s) 1952, 3005
MmeI TCCRAC 1 cut(s) 1416
Mox20I TGGCCA 1 cut(s) 438
MscI TGGCCA 1 cut(s) 438
MslI CAYNNNNRTG 5 cut(s) 881, 1536, 2253, 2651, 2841
Msp20I TGGCCA 1 cut(s) 438
MspA1I CMGCKG 1 cut(s) 3050
MspI CCGG 3 cut(s) 291, 928, 1998
MspR9I CCNGG 5 cut(s) 176, 928, 1421, 1626, 1999
MunI CAATTG 5 cut(s) 460, 552, 677, 1839, 2936
Mva1269I GAATGC 3 cut(s) 199, 876, 2766
MvaI CCWGG 3 cut(s) 176, 1421, 1626
MwoI GCNNNNNNNGC 8 cut(s) 136, 140, 149, 291, 400, 958, 1279, 2913
NciI CCSGG 2 cut(s) 928, 1999
NcoI CCATGG 1 cut(s) 1681
NdeI CATATG 1 cut(s) 2113
NheI GCTAGC 1 cut(s) 139
NlaIV GGNNCC 4 cut(s) 727, 1322, 1393, 2908
NmuCI GTSAC 3 cut(s) 256, 1025, 1903
NspI RCATGY 5 cut(s) 2245, 2337, 2606, 2815, 3003
OliI CACNNNNGTG 1 cut(s) 2651
PaeI GCATGC 1 cut(s) 2337
PagI TCATGA 2 cut(s) 180, 364
PciI ACATGT 3 cut(s) 2241, 2602, 2811
PciSI GCTCTTC 2 cut(s) 2433, 2901
PcsI WCGNNNNNNNCGW 1 cut(s) 194
PctI GAATGC 3 cut(s) 199, 876, 2766
PfeI GAWTC 7 cut(s) 19, 604, 1198, 1573, 1720, 2682, 2830
PflMI CCANNNNNTGG 3 cut(s) 383, 2429, 2717
PfoI TCCNGGA 1 cut(s) 926
PkrI GCNGC 5 cut(s) 624, 1250, 1901, 2707, 3049
PleI GAGTC 2 cut(s) 1951, 3005
PmaCI CACGTG 1 cut(s) 189
PmlI CACGTG 1 cut(s) 189
PpsI GAGTC 2 cut(s) 1951, 3005
Ppu21I YACGTR 1 cut(s) 189
PscI ACATGT 3 cut(s) 2241, 2602, 2811
PshBI ATTAAT 1 cut(s) 1067
PsiI TTATAA 1 cut(s) 1277
Psp6I CCWGG 3 cut(s) 174, 1419, 1624
PspCI CACGTG 1 cut(s) 189
PspGI CCWGG 3 cut(s) 174, 1419, 1624
PspN4I GGNNCC 4 cut(s) 727, 1322, 1393, 2908
PspPI GGNCC 2 cut(s) 268, 1780
PstI CTGCAG 1 cut(s) 236
PsuI RGATCY 1 cut(s) 1438
PvuII CAGCTG 1 cut(s) 3050
RsaI GTAC 4 cut(s) 221, 341, 1836, 2189
RsaNI GTAC 4 cut(s) 220, 340, 1835, 2188
RseI CAYNNNNRTG 5 cut(s) 881, 1536, 2253, 2651, 2841
SalI GTCGAC 1 cut(s) 2483
SapI GCTCTTC 2 cut(s) 2433, 2901
SatI GCNGC 5 cut(s) 623, 1249, 1900, 2706, 3048
Sau96I GGNCC 2 cut(s) 268, 1780
SchI GAGTC 2 cut(s) 1952, 3005
ScrFI CCNGG 5 cut(s) 176, 928, 1421, 1626, 1999
SduI GDGCHC 4 cut(s) 188, 954, 1689, 2084
SexAI ACCWGGT 1 cut(s) 174
SfaNI GCATC 7 cut(s) 253, 666, 811, 1191, 1260, 2200, 2428
SfcI CTRYAG 3 cut(s) 232, 346, 2755
SinI GGWCC 1 cut(s) 268
SmiMI CAYNNNNRTG 5 cut(s) 881, 1536, 2253, 2651, 2841
SmlI CTYRAG 3 cut(s) 1030, 2338, 2561
SmoI CTYRAG 3 cut(s) 1030, 2338, 2561
SphI GCATGC 1 cut(s) 2337
SsiI CCGC 2 cut(s) 708, 2910
StyD4I CCNGG 5 cut(s) 174, 926, 1419, 1624, 1997
StyI CCWWGG 3 cut(s) 1408, 1681, 1783
TaaI ACNGT 3 cut(s) 224, 637, 2588
TaiI ACGT 2 cut(s) 191, 668
TaqI TCGA 6 cut(s) 238, 561, 918, 1723, 2308, 2484
TatI WGTACW 1 cut(s) 2187
TfiI GAWTC 7 cut(s) 19, 604, 1198, 1573, 1720, 2682, 2830
TscAI CASTG 5 cut(s) 634, 823, 888, 1912, 2593
TseFI GTSAC 3 cut(s) 256, 1025, 1903
TseI GCWGC 5 cut(s) 622, 1248, 1899, 2705, 3047
Tsp45I GTSAC 3 cut(s) 256, 1025, 1903
TspGWI ACGGA 1 cut(s) 137
TspRI CASTG 5 cut(s) 634, 823, 888, 1912, 2593
Van91I CCANNNNNTGG 3 cut(s) 383, 2429, 2717
VpaK11BI GGWCC 1 cut(s) 268
VspI ATTAAT 1 cut(s) 1067
XapI RAATTY 8 cut(s) 369, 513, 584, 789, 863, 1342, 1564, 2196
XceI RCATGY 5 cut(s) 2245, 2337, 2606, 2815, 3003
XcmI CCANNNNNNNNNTGG 1 cut(s) 1876
XmiI GTMKAC 2 cut(s) 2484, 2754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.