Rh1AG153900
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
28767568 .. 28773664
6097 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG153900.1

Sequence Viewer

Length: 3216 bp
ATGGAGATCTCATCCATGGGTGTGAGGATTTGGTCAGTATTCATGCAACTGTTTCCCCTGATGATCATCACTTTGGCCTCTTCAAATCTGAGAGGAAATGAGGTGGAAAGACTGTCCTTGCTTGCCTTTAAATCTGAAATTGTCAGTGATCCTCTGGGCATCCTTAGCTCCTGGAATGATTCCTCCAACTTATGTGATGAGTGGCGAGGGATTACTTGCGGCCGAAGACACCAGCGAGTCACGGTTCTGGACCTCCAATCCAGCCAGCTGGAGGGTATTCTATCTCCACACATCGGAAACTTGAGCTTTCTCAGGACATTAAATCTCCAAAACAACCGCTTCATCGGCACCATCCCTCAGGAAGTTGGTCGATTGTCCCGGCTTCAAGGACTAAACCTCGGGAACAACTCATTCGAAGGTGATATCCCCATCAATATATCTCATTGTTTTAATCTCCAATATCTTGTCTTGGCTAATAACACTCTTAGTGGGAAACTTCCAATGGTACTTGGCTCATTGTTCAAGCTTCAAGTACTAACTTTGCGTAGGAACAAATTAGTTGGTGAAATTCCATCTTCTTTTGGAAATCTTTCTTCCCTTCAGTCTCTTTCTGTGGAAGAAAATAATCTGTATGGTGGTCTCATGAATAGCCGCCTTGGGGAATTGAAAAGCTTAAGATATCTTGCATTGGGTACAAATAGATTGAGTGGTACCATCCCTCTCTCCATATACAACCTTTCTTCCATTGAGCACATTTCTGTGATTGGAAACCAATTTCATGGAACTCTTCCTTCTGGGTTGGGCCGCACAATATTTCCAAACCTTCAAGCCTTTCATTTCCAAATGAACAGATTCAGCGGACCAATTCCATTTACAATCTCAAACGCATCCCACCTTTCACAGTTTTTGATCTCTAATAATAATTTTACCGGAAAAGTCCCTAGTCTGGCAAGAGTTTCCAATCTGTTTCGGTTGGAAATGGGTGATAATAATCTTATAAATGAGGATGGTGACTTGGATTTTCTCTCTTCTCTGGTTAATTGTACCAGTTTAGAACGTGTAAATATTAGTGGGAATAATTTTCAAGGAGTGCTACCTGAATCTATCAGCAATTTCTCAAGAAAGCTCAAGGTAATGAGCTTAGGAAGGAATCAGCTACGTGGAAGCATTCCCACAGGGATAGGAAATTTCATCAACTTGTTTGAATTGAGCTTCGAGGAAAACCTATTGAGGGGCCCTATACCCAGTTCAATATGTAAGCCAAGTAAACTGTACAATCTGTTTATAAACCATAATCAGTTATCAGGTTCTATCCCATCTTGTTTGGGAAATCTAACTTTGTTAAGCAGATTAGATCTCATGTCAAACAACTTAAAAGGAGGCATACCAAAAAGTCTTGGTCGATGCAAGTATTTGCAATCTTTGGTTCTTTCTCAAAATAAACTCAACGGTTCTCTTCCGCAAGAAGTCATCGGTTCATCAGCTTTATCACAAGTTTTGGATTTGGATTTATCCAATAACCAATTCACTGGGAACATTCCCAATGAATTAGGTTCTTTGTCTAATCTTGCTTCTTTGAATCTTTCTGAAAATAGGTTATCTGGTGAGATTCCAGCAGAAAGCTTAAGGGGATGCGGACAATTGGAAAGTTTGGACCTCTCTCGTAACAACTTTTCAGGAACAATTCCTGATTATTTGCAGAATTTCAACTTGCAGAATTTAGACCTCTCATTTAATGATTTTGAAGGTGAAGTACCAAATGAAGGAGTATTCAGGTATCCAAGTGTGGTTTCTCTCATGGGAAACAAAGGACTTTGTGGAGGTGTACCTCAGTTGAACTTGCCTAAATGTATCTCCAATGGATCATACTCAAATTCCAATCGATCCAAGTCAAATAAGCCAAAATCATTTTCCAAGTTGAAACCAATTATCTCATTCTTTTGTGGGGTAATTGGAGTTTTCTTAGTGGCGGCCGTGTGCTTTGTGCTCCTCTATAGATCAAGAAAAGCAAGAGTTGAGCCAATAAAAGCAAGAGTTGGGCCAAGAAAAGCAAGAGCTGAGCCAAGAAAAGCAAGTGCTGAGCCAATAAAAGCTAGAGTTGAGCTAAGAAAAGCAGGAGTACTTGAGCCAAGAAAAGCAGTTCAGTCAACTTCAGAACTATCATTGGATATTTCGTTCTTAAAGTTGTCATATGGAGATCTACTTCAAGCAACTGATGGGTTCTCTTCTTGGAATTTGATTGGTGCTGGTAGTTCTGGTTCTGTGTACTGGGGAGTTCTCAATCAGCCAAAAGAAAGAATTGTTGCTGTCAAAGTACTCAATCTTCAAAAGGCAACTACTTCTAATAGTTTCATAGCTGAATGTCAATTCCTTAAAAACATTAGGCACCGAAATCTTGTCAAACTAGTGACTGCTTGCTCAAGTATTGATTTTCAAGGAAATGAGTTCAAAGCTTTGGTTTTTGAGTACATGATGCATGGAAGTCTAGATGAGTGGCTGCATGATTCAGCTGACAGAGTAGTTGAGCTACCCGTTGTGGAGGTGCATTTGAATCTTATCCAAAGGGTAAATATTGCCATTGACATAGCAAGCGCTTTGGATTATTTGCACAATTATTTTCACATCCCAATAGTTCATTGTGATTTAAAGCCCCGTAACGTTCTCTTAGAAAAAGACATGACTGCCTGTGTTTGTGACTTTGGTTTGGCAAGTTACCTCCCAAACACTTCTTGTCCGGTTTCTTCACTAGAACACCCTTCCGATTCGGTAATGGGTTCCATTGGCTATATTGCCCCAGAGTACGGCATGGGAAGTGAGGTGTCAACCTACGGAGACGTGTATAGCTATGGAATCCTATTACTGGAGATGCTTACTGGTAAGAGGCCAACAGATGATATGTTTGCAGATGACATGAACTTGCACAATTTTGTGCTGATGGCTTTGCCTGAACGTGTGAAAGAAATATGTGATCCGGTGCTTCTTCAAGGACAAGAGAGCAGCACTAGTACAAATCCCACAAGCACTAGGAATAATGTCCAAAATGAAACATACAGAGTTGAAGAGTGCCTTATTTCCATTGCTAGGATAGGAGTTGCTTGTTCGGCGCAATTGCCCAAAGAGCGAATGGAGATTGGGAAAGTTTTAGCTGAACTACGTGTAATAATGGATGTACTGACTGGAACCAGGATGCCTAGAGAGAACATGATCACTGCCTAA

Protein Analysis

1071

Amino Acids

118.01

Weight (kDa)

8.24

Isoelectric Point (pI)

37.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 73 2.2e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 78 - 138 6.2e-06 Leucine-rich repeat region
LRR_8 PF13855 104 - 162 3.3e-06 Leucine rich repeat
LRR_14 PF23598 146 - 208 3.9e-07 Leucine-rich repeat region
Pkinase PF00069 745 - 968 2.6e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 746 - 971 3.2e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 998, 1286
Acc65I GGTACC 1 cut(s) 710
AccB1I GGYRCC 3 cut(s) 347, 710, 2385
AciI CCGC 8 cut(s) 219, 337, 652, 805, 858, 1460, 1635, 1970
AclI AACGTT 1 cut(s) 2658
AclWI GGATC 4 cut(s) 143, 1870, 1878, 2963
AcoI YGGCCR 2 cut(s) 220, 1971
AcsI RAATTY 6 cut(s) 567, 1186, 1702, 1717, 1873, 2233
AcuI CTGAAG 2 cut(s) 584, 2136
AfeI AGCGCT 1 cut(s) 2593
AfiI CCNNNNNNNGG 9 cut(s) 271, 293, 658, 946, 1231, 1763, 2801, 2860, 3081
AflII CTTAAG 2 cut(s) 673, 1624
AflIII ACRYGT 4 cut(s) 1057, 2835, 2950, 3154
AhlI ACTAGT 2 cut(s) 2404, 3002
AjiI CACGTC 1 cut(s) 2836
AjnI CCWGG 2 cut(s) 170, 3182
AjuI GAANNNNNNNTTGG 6 cut(s) 1508, 1540, 1774, 1806, 1894, 1926
AloI GAACNNNNNNTCC 2 cut(s) 2159, 2191
Alw21I GWGCWC 2 cut(s) 753, 1989
Alw26I GTCTC 3 cut(s) 609, 644, 2826
AlwI GGATC 4 cut(s) 143, 1870, 1878, 2963
Ama87I CYCGRG 1 cut(s) 398
Aor51HI AGCGCT 1 cut(s) 2593
AoxI GGCC 7 cut(s) 75, 220, 802, 1234, 1971, 2039, 2882
ApaI GGGCCC 1 cut(s) 1238
ApeKI GCWGC 2 cut(s) 2497, 2997
ApoI RAATTY 6 cut(s) 567, 1186, 1702, 1717, 1873, 2233
Asp700I GAANNNNTTC 2 cut(s) 589, 851
Asp718I GGTACC 1 cut(s) 710
AspLEI GCGC 2 cut(s) 2594, 3106
AspS9I GGNCC 7 cut(s) 250, 802, 860, 1234, 1235, 1654, 2039
AsuC2I CCSGG 1 cut(s) 379
AsuHPI GGTGA 6 cut(s) 431, 575, 995, 1022, 1616, 1760
AsuII TTCGAA 1 cut(s) 414
AvaI CYCGRG 1 cut(s) 398
AvaII GGWCC 3 cut(s) 250, 860, 1654
AxyI CCTNAGG 1 cut(s) 357
BaeGI GKGCMC 1 cut(s) 1238
BanI GGYRCC 3 cut(s) 347, 710, 2385
BanII GRGCYC 1 cut(s) 1238
BarI GAAGNNNNNNTAC 4 cut(s) 1737, 1769, 2307, 2339
BbsI GAAGAC 1 cut(s) 232
Bbv12I GWGCWC 2 cut(s) 753, 1989
BbvI GCAGC 2 cut(s) 2484, 3009
BccI CCATC 8 cut(s) 359, 437, 580, 722, 1001, 1324, 2210, 2929
BceAI ACGGC 2 cut(s) 1958, 2818
BciT130I CCWGG 2 cut(s) 172, 3184
BciVI GTATCC 1 cut(s) 1788
BclI TGATCA 2 cut(s) 63, 3204
BcnI CCSGG 1 cut(s) 379
BcoDI GTCTC 3 cut(s) 609, 644, 2826
BcuI ACTAGT 2 cut(s) 2404, 3002
BfaI CTAG 9 cut(s) 942, 2094, 2405, 2486, 2747, 3003, 3024, 3081, 3192
BfmI CTRYAG 1 cut(s) 1993
BfoI RGCGCY 1 cut(s) 2595
BfrI CTTAAG 2 cut(s) 673, 1624
BfuI GTATCC 1 cut(s) 1788
BglII AGATCT 3 cut(s) 6, 1354, 2197
BisI GCNGC 6 cut(s) 220, 652, 805, 1971, 2498, 2998
BlpI GCTNAGC 2 cut(s) 2058, 2079
BlsI GCNGC 6 cut(s) 221, 653, 806, 1972, 2499, 2999
BmcAI AGTACT 3 cut(s) 534, 2121, 2316
Bme1390I CCNGG 3 cut(s) 172, 379, 3184
Bme18I GGWCC 3 cut(s) 250, 860, 1654
BmeT110I CYCGRG 1 cut(s) 398
BmgBI CACGTC 1 cut(s) 2836
BmgT120I GGNCC 7 cut(s) 250, 802, 860, 1234, 1235, 1654, 2039
BmiI GGNNCC 7 cut(s) 349, 712, 1235, 1236, 2387, 2776, 3181
BmrFI CCNGG 3 cut(s) 172, 379, 3184
BmrI ACTGGG 3 cut(s) 1239, 1539, 2278
BmsI GCATC 7 cut(s) 168, 896, 1394, 1622, 2463, 2856, 3177
BmuI ACTGGG 3 cut(s) 1239, 1539, 2278
BpiI GAAGAC 1 cut(s) 232
BpmI CTGGAG 2 cut(s) 290, 2882
Bpu10I CCTNAGC 2 cut(s) 164, 1141
Bpu1102I GCTNAGC 2 cut(s) 2058, 2079
Bpu14I TTCGAA 1 cut(s) 414
BpuEI CTTGAG 5 cut(s) 322, 1102, 1112, 2144, 2404
BpuMI CCSGG 1 cut(s) 379
Bsa29I ATCGAT 1 cut(s) 1882
BsaAI YACGTR 2 cut(s) 1160, 3155
BsaBI GATNNNNATC 2 cut(s) 65, 990
BsaI GGTCTC 1 cut(s) 644
BsaJI CCNNGG 3 cut(s) 15, 397, 655
BsaWI WCCGGW 3 cut(s) 929, 2734, 2971
Bsc4I CCNNNNNNNGG 9 cut(s) 271, 293, 658, 946, 1231, 1763, 2801, 2860, 3081
Bse1I ACTGG 7 cut(s) 1047, 1245, 1534, 2273, 2865, 2878, 3181
Bse21I CCTNAGG 1 cut(s) 357
Bse3DI GCAATG 1 cut(s) 3075
Bse8I GATNNNNATC 2 cut(s) 65, 990
BseBI CCWGG 2 cut(s) 172, 3184
BseCI ATCGAT 1 cut(s) 1882
BseDI CCNNGG 3 cut(s) 15, 397, 655
BseJI GATNNNNATC 2 cut(s) 65, 990
BseLI CCNNNNNNNGG 9 cut(s) 271, 293, 658, 946, 1231, 1763, 2801, 2860, 3081
BseMI GCAATG 1 cut(s) 3075
BseMII CTCAG 6 cut(s) 80, 325, 371, 1844, 2049, 2070
BseNI ACTGG 7 cut(s) 1047, 1245, 1534, 2273, 2865, 2878, 3181
BseRI GAGGAG 1 cut(s) 1979
BseSI GKGCMC 1 cut(s) 1238
BseX3I CGGCCG 2 cut(s) 220, 1971
BseXI GCAGC 2 cut(s) 2484, 3009
Bsh1285I CGRYCG 2 cut(s) 223, 1974
BshFI GGCC 7 cut(s) 77, 222, 804, 1236, 1973, 2041, 2884
BshNI GGYRCC 3 cut(s) 347, 710, 2385
BshVI ATCGAT 1 cut(s) 1882
BsiEI CGRYCG 2 cut(s) 223, 1974
BsiHKAI GWGCWC 2 cut(s) 753, 1989
BsiHKCI CYCGRG 1 cut(s) 398
BsiSI CCGG 4 cut(s) 379, 930, 2735, 2972
BslFI GGGAC 2 cut(s) 361, 923
BslI CCNNNNNNNGG 9 cut(s) 271, 293, 658, 946, 1231, 1763, 2801, 2860, 3081
BsmAI GTCTC 3 cut(s) 609, 644, 2826
BsmBI CGTCTC 1 cut(s) 2826
BsmFI GGGAC 2 cut(s) 361, 923
BsmI GAATGC 1 cut(s) 1167
BsnI GGCC 7 cut(s) 77, 222, 804, 1236, 1973, 2041, 2884
Bso31I GGTCTC 1 cut(s) 644
BsoBI CYCGRG 1 cut(s) 398
Bsp119I TTCGAA 1 cut(s) 414
Bsp120I GGGCCC 1 cut(s) 1234
Bsp1286I GDGCHC 3 cut(s) 753, 1238, 1989
Bsp1407I TGTACA 1 cut(s) 1272
Bsp1720I GCTNAGC 2 cut(s) 2058, 2079
Bsp19I CCATGG 1 cut(s) 15
BspACI CCGC 8 cut(s) 219, 337, 652, 805, 858, 1460, 1635, 1970
BspANI GGCC 7 cut(s) 77, 222, 804, 1236, 1973, 2041, 2884
BspCNI CTCAG 6 cut(s) 81, 324, 370, 1843, 2050, 2071
BspDI ATCGAT 1 cut(s) 1882
BspHI TCATGA 1 cut(s) 642
BspLI GGNNCC 7 cut(s) 349, 712, 1235, 1236, 2387, 2776, 3181
BspPI GGATC 4 cut(s) 143, 1870, 1878, 2963
BspT104I TTCGAA 1 cut(s) 414
BspT107I GGYRCC 3 cut(s) 347, 710, 2385
BspTI CTTAAG 2 cut(s) 673, 1624
BspTNI GGTCTC 1 cut(s) 644
BsrDI GCAATG 1 cut(s) 3075
BsrGI TGTACA 1 cut(s) 1272
BsrI ACTGG 7 cut(s) 1047, 1245, 1534, 2273, 2865, 2878, 3181
BssECI CCNNGG 3 cut(s) 15, 397, 655
BssT1I CCWWGG 2 cut(s) 15, 655
Bst2UI CCWGG 2 cut(s) 172, 3184
Bst4CI ACNGT 6 cut(s) 51, 114, 244, 903, 1272, 1451
Bst6I CTCTTC 6 cut(s) 85, 792, 1033, 1461, 2230, 3054
BstAFI CTTAAG 2 cut(s) 673, 1624
BstAUI TGTACA 1 cut(s) 1272
BstBAI YACGTR 2 cut(s) 1160, 3155
BstBI TTCGAA 1 cut(s) 414
BstC8I GCNNGC 4 cut(s) 123, 266, 2416, 2590
BstDSI CCRYGG 1 cut(s) 15
BstH2I RGCGCY 1 cut(s) 2595
BstHHI GCGC 2 cut(s) 2594, 3106
BstMAI GTCTC 3 cut(s) 609, 644, 2826
BstMCI CGRYCG 2 cut(s) 223, 1974
BstMWI GCNNNNNNNGC 4 cut(s) 165, 345, 3101, 3118
BstNI CCWGG 2 cut(s) 172, 3184
BstSCI CCNGG 3 cut(s) 170, 377, 3182
BstSFI CTRYAG 1 cut(s) 1993
BstSLI GKGCMC 1 cut(s) 1238
BstV1I GCAGC 2 cut(s) 2484, 3009
BstV2I GAAGAC 1 cut(s) 232
BstX2I RGATCY 3 cut(s) 6, 1354, 2197
BstXI CCANNNNNNTGG 3 cut(s) 268, 779, 1529
BstYI RGATCY 3 cut(s) 6, 1354, 2197
BstZI CGGCCG 2 cut(s) 220, 1971
Bsu15I ATCGAT 1 cut(s) 1882
Bsu36I CCTNAGG 1 cut(s) 357
BsuI GTATCC 1 cut(s) 1788
BsuRI GGCC 7 cut(s) 77, 222, 804, 1236, 1973, 2041, 2884
BsuTUI ATCGAT 1 cut(s) 1882
BtgI CCRYGG 1 cut(s) 15
BtrI CACGTC 1 cut(s) 2836
BtsI GCAGTG 1 cut(s) 3207
BtsIMutI CAGTG 3 cut(s) 151, 1527, 3207
Cac8I GCNNGC 4 cut(s) 123, 266, 2416, 2590
CciI TCATGA 1 cut(s) 642
CfoI GCGC 2 cut(s) 2594, 3106
Cfr13I GGNCC 7 cut(s) 250, 802, 860, 1234, 1235, 1654, 2039
ClaI ATCGAT 1 cut(s) 1882
DraI TTTAAA 2 cut(s) 130, 2646
EaeI YGGCCR 2 cut(s) 220, 1971
EagI CGGCCG 2 cut(s) 220, 1971
Eam1104I CTCTTC 6 cut(s) 85, 792, 1033, 1461, 2230, 3054
EarI CTCTTC 6 cut(s) 85, 792, 1033, 1461, 2230, 3054
EclXI CGGCCG 2 cut(s) 220, 1971
Eco130I CCWWGG 2 cut(s) 15, 655
Eco24I GRGCYC 1 cut(s) 1238
Eco31I GGTCTC 1 cut(s) 644
Eco32I GATATC 2 cut(s) 424, 680
Eco47I GGWCC 3 cut(s) 250, 860, 1654
Eco47III AGCGCT 1 cut(s) 2593
Eco52I CGGCCG 2 cut(s) 220, 1971
Eco57I CTGAAG 2 cut(s) 584, 2136
Eco81I CCTNAGG 1 cut(s) 357
Eco88I CYCGRG 1 cut(s) 398
EcoO109I RGGNCCY 2 cut(s) 1234, 1235
EcoRII CCWGG 2 cut(s) 170, 3182
EcoRV GATATC 2 cut(s) 424, 680
EcoT14I CCWWGG 2 cut(s) 15, 655
EcoT22I ATGCAT 1 cut(s) 2478
EcoT38I GRGCYC 1 cut(s) 1238
ErhI CCWWGG 2 cut(s) 15, 655
Esp3I CGTCTC 1 cut(s) 2826
FalI AAGNNNNNCTT 2 cut(s) 3051, 3083
FaqI GGGAC 2 cut(s) 361, 923
FauNDI CATATG 1 cut(s) 2191
FbaI TGATCA 2 cut(s) 63, 3204
Fnu4HI GCNGC 6 cut(s) 220, 652, 805, 1971, 2498, 2998
FokI GGATG 9 cut(s) 146, 338, 701, 874, 1019, 1644, 2609, 3179, 3199
FriOI GRGCYC 1 cut(s) 1238
Fsp4HI GCNGC 6 cut(s) 220, 652, 805, 1971, 2498, 2998
FspBI CTAG 9 cut(s) 942, 2094, 2405, 2486, 2747, 3003, 3024, 3081, 3192
GlaI GCGC 2 cut(s) 2593, 3105
GluI GCNGC 6 cut(s) 220, 652, 805, 1971, 2498, 2998
GsuI CTGGAG 2 cut(s) 290, 2882
HaeII RGCGCY 1 cut(s) 2595
HaeIII GGCC 7 cut(s) 77, 222, 804, 1236, 1973, 2041, 2884
HapII CCGG 4 cut(s) 379, 930, 2735, 2972
HhaI GCGC 2 cut(s) 2594, 3106
Hin6I GCGC 2 cut(s) 2592, 3104
HinP1I GCGC 2 cut(s) 2592, 3104
HincII GTYRAC 2 cut(s) 2148, 2823
HindII GTYRAC 2 cut(s) 2148, 2823
HindIII AAGCTT 4 cut(s) 524, 670, 1621, 2451
HpaII CCGG 4 cut(s) 379, 930, 2735, 2972
HphI GGTGA 6 cut(s) 431, 575, 995, 1022, 1616, 1760
Hpy166II GTNNAC 5 cut(s) 1268, 1826, 2148, 2266, 2823
Hpy188I TCNGA 6 cut(s) 90, 136, 296, 1588, 2155, 2761
Hpy8I GTNNAC 5 cut(s) 1268, 1826, 2148, 2266, 2823
HpyAV CCTTC 8 cut(s) 410, 608, 801, 833, 1140, 1739, 1757, 2766
HpyCH4III ACNGT 6 cut(s) 51, 114, 244, 903, 1272, 1451
HpyCH4IV ACGT 6 cut(s) 1057, 1159, 2658, 2835, 2950, 3154
HpyF10VI GCNNNNNNNGC 4 cut(s) 165, 345, 3101, 3118
HpySE526I ACGT 6 cut(s) 1057, 1159, 2658, 2835, 2950, 3154
HspAI GCGC 2 cut(s) 2592, 3104
KpnI GGTACC 1 cut(s) 714
Ksp22I TGATCA 2 cut(s) 63, 3204
LmnI GCTCC 2 cut(s) 173, 1992
Lsp1109I GCAGC 2 cut(s) 2484, 3009
LweI GCATC 7 cut(s) 168, 896, 1394, 1622, 2463, 2856, 3177
MaeI CTAG 9 cut(s) 942, 2094, 2405, 2486, 2747, 3003, 3024, 3081, 3192
MaeII ACGT 6 cut(s) 1057, 1159, 2658, 2835, 2950, 3154
MaeIII GTNAC 7 cut(s) 238, 1010, 1664, 2407, 2654, 2693, 2711
MfeI CAATTG 2 cut(s) 1640, 3107
MflI RGATCY 3 cut(s) 6, 1354, 2197
MhlI GDGCHC 3 cut(s) 753, 1238, 1989
MlyI GAGTC 1 cut(s) 246
MmeI TCCRAC 2 cut(s) 210, 954
Mph1103I ATGCAT 1 cut(s) 2478
MroXI GAANNNNTTC 2 cut(s) 589, 851
MslI CAYNNNNRTG 2 cut(s) 20, 758
MspA1I CMGCKG 3 cut(s) 268, 858, 2510
MspCI CTTAAG 2 cut(s) 673, 1624
MspI CCGG 4 cut(s) 379, 930, 2735, 2972
MspR9I CCNGG 3 cut(s) 172, 379, 3184
MunI CAATTG 2 cut(s) 1640, 3107
Mva1269I GAATGC 1 cut(s) 1167
MvaI CCWGG 2 cut(s) 172, 3184
MwoI GCNNNNNNNGC 4 cut(s) 165, 345, 3101, 3118
NciI CCSGG 1 cut(s) 379
NcoI CCATGG 1 cut(s) 15
NdeI CATATG 1 cut(s) 2191
NlaIV GGNNCC 7 cut(s) 349, 712, 1235, 1236, 2387, 2776, 3181
NmuCI GTSAC 4 cut(s) 238, 1010, 2407, 2693
NsiI ATGCAT 1 cut(s) 2478
NspV TTCGAA 1 cut(s) 414
PagI TCATGA 1 cut(s) 642
PctI GAATGC 1 cut(s) 1167
PdmI GAANNNNTTC 2 cut(s) 589, 851
PfoI TCCNGGA 1 cut(s) 170
PkrI GCNGC 6 cut(s) 221, 653, 806, 1972, 2499, 2999
PleI GAGTC 1 cut(s) 245
PpsI GAGTC 1 cut(s) 245
Ppu21I YACGTR 2 cut(s) 1160, 3155
PsiI TTATAA 2 cut(s) 998, 1286
Psp1406I AACGTT 1 cut(s) 2658
Psp6I CCWGG 2 cut(s) 170, 3182
PspGI CCWGG 2 cut(s) 170, 3182
PspN4I GGNNCC 7 cut(s) 349, 712, 1235, 1236, 2387, 2776, 3181
PspOMI GGGCCC 1 cut(s) 1234
PspPI GGNCC 7 cut(s) 250, 802, 860, 1234, 1235, 1654, 2039
PsrI GAACNNNNNNTAC 2 cut(s) 2242, 2274
PsuI RGATCY 3 cut(s) 6, 1354, 2197
PvuII CAGCTG 2 cut(s) 268, 2510
RseI CAYNNNNRTG 2 cut(s) 20, 758
SatI GCNGC 6 cut(s) 220, 652, 805, 1971, 2498, 2998
Sau96I GGNCC 7 cut(s) 250, 802, 860, 1234, 1235, 1654, 2039
ScaI AGTACT 3 cut(s) 534, 2121, 2316
SchI GAGTC 1 cut(s) 246
ScrFI CCNGG 3 cut(s) 172, 379, 3184
SduI GDGCHC 3 cut(s) 753, 1238, 1989
SfaNI GCATC 7 cut(s) 168, 896, 1394, 1622, 2463, 2856, 3177
SfcI CTRYAG 1 cut(s) 1993
SfuI TTCGAA 1 cut(s) 414
SinI GGWCC 3 cut(s) 250, 860, 1654
SmiMI CAYNNNNRTG 2 cut(s) 20, 758
SmlI CTYRAG 7 cut(s) 301, 673, 1117, 1127, 1624, 2123, 2419
SmoI CTYRAG 7 cut(s) 301, 673, 1117, 1127, 1624, 2123, 2419
SpeI ACTAGT 2 cut(s) 2404, 3002
SsiI CCGC 8 cut(s) 219, 337, 652, 805, 858, 1460, 1635, 1970
SspI AATATT 3 cut(s) 813, 1066, 2572
SspMI CTAG 9 cut(s) 942, 2094, 2405, 2486, 2747, 3003, 3024, 3081, 3192
StyD4I CCNGG 3 cut(s) 170, 377, 3182
StyI CCWWGG 2 cut(s) 15, 655
TaaI ACNGT 6 cut(s) 51, 114, 244, 903, 1272, 1451
TaiI ACGT 6 cut(s) 1060, 1162, 2661, 2838, 2953, 3157
TaqI TCGA 5 cut(s) 370, 414, 1215, 1402, 1882
TatI WGTACW 8 cut(s) 532, 1272, 2119, 2265, 2314, 2466, 3005, 3169
TauI GCSGC 4 cut(s) 222, 654, 807, 1973
TscAI CASTG 3 cut(s) 151, 1534, 3214
TseFI GTSAC 4 cut(s) 238, 1010, 2407, 2693
TseI GCWGC 2 cut(s) 2497, 2997
Tsp45I GTSAC 4 cut(s) 238, 1010, 2407, 2693
TspGWI ACGGA 1 cut(s) 2844
TspRI CASTG 3 cut(s) 151, 1534, 3214
Vha464I CTTAAG 2 cut(s) 673, 1624
VpaK11BI GGWCC 3 cut(s) 250, 860, 1654
XapI RAATTY 6 cut(s) 567, 1186, 1702, 1717, 1873, 2233
XbaI TCTAGA 1 cut(s) 2485
XcmI CCANNNNNNNNNTGG 1 cut(s) 3121
XmnI GAANNNNTTC 2 cut(s) 589, 851
XspI CTAG 9 cut(s) 942, 2094, 2405, 2486, 2747, 3003, 3024, 3081, 3192
ZrmI AGTACT 3 cut(s) 534, 2121, 2316
Zsp2I ATGCAT 1 cut(s) 2478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.