Rorug01G0247700
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
35512877 .. 35518541
5665 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0247700.1

Sequence Viewer

Length: 1299 bp
ATGGATCCGGTTCTTCCAATCGCGGTCCTCTCCGTCCTCATCGGCGCCGTCATTGCCCTCGCCTTCTTCGGCAGCTACTTCCGCAAGCGGAGCTCCGAAGTCGAGTCCATTTCCAAACCGGAGCTCCACGCCGATCAGAAAAAGCAACCGGCCAAGCCCGCCCAGAATAAGAAGTCCCACCCCAAGCCTCACTCTGATAAGGATCACAACAAGAAGCACCATCCGTTGGATGTGAATACGTTGAAAGGTCATGGAGATTCCGTTGATGGACTGTGTTTTTCTCCTGATGGACGGAGTTTGGCTACAGCTTGTGCGGATGGAGTGGTCAGGGTATTCAAGTTGGATGATGCTTCGAGTAAAAGTTTCAAATTTCTGAAAATAAATACGCCAGTTGGTGGTCCTCCAGTAGCAGTTTCATTTTCCGATGATGCATCGTCCTTAGTTGTCGCTTCCCAAAATCTGTCTGGCGCTTCTTTGTACATGTATGGTGGAGTGGAAAAACCCAAAATTTCTAATGAATCCGGTCAGCCATCCAAGGTTCCTCTCCCAGAAATAAAGTGGGAACAGCACAAAATTCATGAGAAATTAGGTATTCTCACCTTATTTGGGACCACTGCAAGTTATGGCACTGCTGATGGGAGTGCAATTATTGCTTCTTGTTCTGAAGGTACTGACATCATAATTTGGCATGGTAAAACTGGCAAGAACTTGGGGCATGTTGACACAAATCAGTTGAAAAACAACATGGCTGCTATATCACCAAATGGACGTTTCATTGCTGCAGCAGCTTTTACTGCAGATGTGAAGGTATGGGAGATCGTATATTCAAAGGATGGATCGGTCAAGGAGGTTTCAAAAGCCATGCAACTTAAAGGGCATAAGAGTGCAGTGACTTGGTTATGCTTTACTCCAGACTCGGAACAAATTATCACAGCTTCAAAAGATGGTTCGATAAGAATTTGGAATATCAATGTTCGATATCATATGGATGAGGATCCAAAAACTCTCAAGGTGTTTCCTATTCCACTTGGTGGTGCTAGCCCCCACTATGATCGTCTTAGTTTATCTCCTGATGGAAAAATCTTGGCGGCAACCCATGGTTCAACATTGCAGTGGTTATGTGTTGAAACTGGAGAGGTTTTGGACACGGCTGACAAAGCCCATGAAGATTTTATCACATGCATTGCATGGGCACCACAGGCTATGCCAATGGGTGATAAGAAAGTATTAATTTTGGCAACAGCAAGTGTAGATAAAAAGGTTAAATTCTGGGCTGCTCCATCCCTCAATGCATCGTAA

Protein Analysis

432

Amino Acids

46.51

Weight (kDa)

8.53

Isoelectric Point (pI)

30.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_THOC3 PF25174 76 - 176 1.2e-07 THOC3 beta-propeller domain
WD40 PF00400 78 - 112 5.9e-08 WD domain, G-beta repeat
WD40_Prp19 PF24814 78 - 154 1.1e-06 Prp19 WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 179 - 324 1.2e-06 CAF1B/HIR1 beta-propeller domain
Beta-prop_EML_2 PF23414 210 - 329 3.4e-09 Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta PF25391 214 - 325 1.4e-06 G protein beta WD-40 repeat protein
Beta-prop_WDR5 PF25175 215 - 324 1.3e-13 WDR5 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 216 - 325 4e-08 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 221 - 323 2.2e-13 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 224 - 321 3.4e-07 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 250 - 325 4.5e-11 THOC3 beta-propeller domain
WDR55 PF24796 251 - 325 4.1e-06 WDR55
WD40_WDHD1_1st PF24817 281 - 424 2.9e-13 WDHD1 first WD40 domain
WD40 PF00400 289 - 322 1.9e-09 WD domain, G-beta repeat
Beta-prop_WDR36-Utp21_2nd PF25168 289 - 368 8.1e-07 WDR36/Utp21 second beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 44, 1192
AccB7I CCANNNNNTGG 3 cut(s) 226, 395, 1031
AccII CGCG 1 cut(s) 23
AciI CCGC 6 cut(s) 23, 82, 88, 159, 314, 1088
AclWI GGATC 5 cut(s) 12, 210, 844, 989, 1002
AcoI YGGCCR 1 cut(s) 150
AcsI RAATTY 5 cut(s) 368, 507, 573, 957, 1265
AcuI CTGAAG 1 cut(s) 684
AcyI GRCGYC 1 cut(s) 45
AdeI CACNNNGTG 1 cut(s) 1031
AfaI GTAC 2 cut(s) 479, 670
AfiI CCNNNNNNNGG 4 cut(s) 226, 395, 606, 1031
AflIII ACRYGT 1 cut(s) 480
AgsI TTSAA 9 cut(s) 244, 337, 367, 736, 828, 855, 939, 1104, 1127
AluBI AGCT 6 cut(s) 75, 93, 124, 308, 788, 935
AluI AGCT 6 cut(s) 75, 93, 124, 308, 788, 935
Alw21I GWGCWC 2 cut(s) 95, 126
AlwI GGATC 5 cut(s) 12, 210, 844, 989, 1002
AoxI GGCC 1 cut(s) 150
ApeKI GCWGC 6 cut(s) 72, 749, 779, 782, 785, 1274
ApoI RAATTY 5 cut(s) 368, 507, 573, 957, 1265
AseI ATTAAT 1 cut(s) 1229
AspLEI GCGC 2 cut(s) 47, 470
AspS9I GGNCC 3 cut(s) 25, 398, 609
AsuHPI GGTGA 3 cut(s) 589, 750, 1226
AsuNHI GCTAGC 1 cut(s) 1037
AvaII GGWCC 3 cut(s) 25, 398, 609
BaeGI GKGCMC 1 cut(s) 1195
BamHI GGATCC 2 cut(s) 4, 994
BanI GGYRCC 2 cut(s) 44, 1192
BanII GRGCYC 2 cut(s) 95, 126
Bbv12I GWGCWC 2 cut(s) 95, 126
BbvI GCAGC 6 cut(s) 84, 736, 766, 794, 797, 1261
BceAI ACGGC 2 cut(s) 32, 1164
BfaI CTAG 1 cut(s) 1038
BfmI CTRYAG 3 cut(s) 303, 780, 795
BfoI RGCGCY 2 cut(s) 48, 471
BisI GCNGC 7 cut(s) 73, 750, 780, 783, 786, 1089, 1275
BlsI GCNGC 7 cut(s) 74, 751, 781, 784, 787, 1090, 1276
Bme18I GGWCC 3 cut(s) 25, 398, 609
BmgT120I GGNCC 3 cut(s) 25, 398, 609
BmiI GGNNCC 6 cut(s) 6, 46, 540, 610, 996, 1194
BmsI GCATC 3 cut(s) 337, 418, 440
BmtI GCTAGC 1 cut(s) 1041
BpmI CTGGAG 3 cut(s) 387, 894, 1152
BpuEI CTTGAG 1 cut(s) 992
BsaBI GATNNNNATC 2 cut(s) 201, 993
BsaHI GRCGYC 1 cut(s) 45
BsaJI CCNNGG 2 cut(s) 534, 1096
BsaWI WCCGGW 3 cut(s) 7, 118, 521
BsaXI ACNNNNNCTCC 4 cut(s) 108, 138, 246, 276
Bsc4I CCNNNNNNNGG 4 cut(s) 226, 395, 606, 1031
Bse118I RCCGGY 1 cut(s) 148
Bse1I ACTGG 4 cut(s) 389, 404, 703, 1135
Bse3DI GCAATG 4 cut(s) 51, 774, 1106, 1182
Bse8I GATNNNNATC 2 cut(s) 201, 993
BseDI CCNNGG 2 cut(s) 534, 1096
BseGI GGATG 8 cut(s) 220, 235, 322, 349, 530, 838, 994, 1280
BseJI GATNNNNATC 2 cut(s) 201, 993
BseLI CCNNNNNNNGG 4 cut(s) 226, 395, 606, 1031
BseMI GCAATG 4 cut(s) 51, 774, 1106, 1182
BseNI ACTGG 4 cut(s) 389, 404, 703, 1135
BseSI GKGCMC 1 cut(s) 1195
BseXI GCAGC 6 cut(s) 84, 736, 766, 794, 797, 1261
BsgI GTGCAG 1 cut(s) 906
Bsh1236I CGCG 1 cut(s) 23
BshFI GGCC 1 cut(s) 152
BshNI GGYRCC 2 cut(s) 44, 1192
BsiHKAI GWGCWC 2 cut(s) 95, 126
BsiSI CCGG 4 cut(s) 8, 119, 149, 522
BslFI GGGAC 2 cut(s) 160, 622
BslI CCNNNNNNNGG 4 cut(s) 226, 395, 606, 1031
BsmFI GGGAC 2 cut(s) 160, 622
BsnI GGCC 1 cut(s) 152
Bsp1286I GDGCHC 3 cut(s) 95, 126, 1195
Bsp1407I TGTACA 1 cut(s) 477
Bsp143I GATC 7 cut(s) 4, 133, 202, 816, 836, 994, 1051
Bsp19I CCATGG 1 cut(s) 1096
BspACI CCGC 6 cut(s) 23, 82, 88, 159, 314, 1088
BspANI GGCC 1 cut(s) 152
BspFNI CGCG 1 cut(s) 23
BspHI TCATGA 1 cut(s) 577
BspLI GGNNCC 6 cut(s) 6, 46, 540, 610, 996, 1194
BspMAI CTGCAG 2 cut(s) 784, 799
BspOI GCTAGC 1 cut(s) 1041
BspPI GGATC 5 cut(s) 12, 210, 844, 989, 1002
BspT107I GGYRCC 2 cut(s) 44, 1192
BsrDI GCAATG 4 cut(s) 51, 774, 1106, 1182
BsrFI RCCGGY 1 cut(s) 148
BsrGI TGTACA 1 cut(s) 477
BsrI ACTGG 4 cut(s) 389, 404, 703, 1135
BssAI RCCGGY 1 cut(s) 148
BssECI CCNNGG 2 cut(s) 534, 1096
BssMI GATC 7 cut(s) 4, 133, 202, 816, 836, 994, 1051
BssNI GRCGYC 1 cut(s) 45
BssT1I CCWWGG 2 cut(s) 534, 1096
Bst4CI ACNGT 1 cut(s) 273
BstACI GRCGYC 1 cut(s) 45
BstAPI GCANNNNNTGC 1 cut(s) 650
BstAUI TGTACA 1 cut(s) 477
BstC8I GCNNGC 3 cut(s) 86, 159, 1039
BstDEI CTNAG 2 cut(s) 439, 1058
BstDSI CCRYGG 1 cut(s) 1096
BstF5I GGATG 8 cut(s) 220, 235, 322, 349, 530, 838, 994, 1280
BstFNI CGCG 1 cut(s) 23
BstH2I RGCGCY 2 cut(s) 48, 471
BstHHI GCGC 2 cut(s) 47, 470
BstKTI GATC 7 cut(s) 7, 136, 205, 819, 839, 997, 1054
BstMBI GATC 7 cut(s) 4, 133, 202, 816, 836, 994, 1051
BstMWI GCNNNNNNNGC 9 cut(s) 53, 81, 90, 158, 650, 785, 794, 1157, 1199
BstNSI RCATGY 3 cut(s) 484, 719, 1182
BstSFI CTRYAG 3 cut(s) 303, 780, 795
BstSLI GKGCMC 1 cut(s) 1195
BstUI CGCG 1 cut(s) 23
BstV1I GCAGC 6 cut(s) 84, 736, 766, 794, 797, 1261
BstX2I RGATCY 2 cut(s) 4, 994
BstYI RGATCY 2 cut(s) 4, 994
BsuRI GGCC 1 cut(s) 152
BtgI CCRYGG 1 cut(s) 1096
BtsCI GGATG 8 cut(s) 220, 235, 322, 349, 530, 838, 994, 1280
BtsI GCAGTG 4 cut(s) 612, 627, 894, 1118
BtsIMutI CAGTG 4 cut(s) 612, 627, 894, 1118
Cac8I GCNNGC 3 cut(s) 86, 159, 1039
CciI TCATGA 1 cut(s) 577
CfoI GCGC 2 cut(s) 47, 470
Cfr10I RCCGGY 1 cut(s) 148
Cfr13I GGNCC 3 cut(s) 25, 398, 609
Csp6I GTAC 2 cut(s) 478, 669
CviQI GTAC 2 cut(s) 478, 669
DdeI CTNAG 2 cut(s) 439, 1058
DinI GGCGCC 1 cut(s) 46
DpnI GATC 7 cut(s) 6, 135, 204, 818, 838, 996, 1053
DpnII GATC 7 cut(s) 4, 133, 202, 816, 836, 994, 1051
DraIII CACNNNGTG 1 cut(s) 1031
EaeI YGGCCR 1 cut(s) 150
Ecl136II GAGCTC 2 cut(s) 93, 124
Eco130I CCWWGG 2 cut(s) 534, 1096
Eco24I GRGCYC 2 cut(s) 95, 126
Eco32I GATATC 1 cut(s) 980
Eco47I GGWCC 3 cut(s) 25, 398, 609
Eco53kI GAGCTC 2 cut(s) 93, 124
Eco57I CTGAAG 1 cut(s) 684
EcoICRI GAGCTC 2 cut(s) 93, 124
EcoRV GATATC 1 cut(s) 980
EcoT14I CCWWGG 2 cut(s) 534, 1096
EcoT22I ATGCAT 3 cut(s) 433, 1184, 1294
EcoT38I GRGCYC 2 cut(s) 95, 126
EgeI GGCGCC 1 cut(s) 46
EheI GGCGCC 1 cut(s) 46
ErhI CCWWGG 2 cut(s) 534, 1096
FaqI GGGAC 2 cut(s) 160, 622
FauI CCCGC 1 cut(s) 166
FauNDI CATATG 1 cut(s) 984
Fnu4HI GCNGC 7 cut(s) 73, 750, 780, 783, 786, 1089, 1275
FokI GGATG 8 cut(s) 207, 242, 329, 356, 517, 845, 1001, 1267
FriOI GRGCYC 2 cut(s) 95, 126
Fsp4HI GCNGC 7 cut(s) 73, 750, 780, 783, 786, 1089, 1275
FspBI CTAG 1 cut(s) 1038
GlaI GCGC 2 cut(s) 46, 469
GluI GCNGC 7 cut(s) 73, 750, 780, 783, 786, 1089, 1275
GsuI CTGGAG 3 cut(s) 387, 894, 1152
HaeII RGCGCY 2 cut(s) 48, 471
HaeIII GGCC 1 cut(s) 152
HapII CCGG 4 cut(s) 8, 119, 149, 522
HhaI GCGC 2 cut(s) 47, 470
Hin1I GRCGYC 1 cut(s) 45
Hin6I GCGC 2 cut(s) 45, 468
HinP1I GCGC 2 cut(s) 45, 468
HincII GTYRAC 1 cut(s) 721
HindII GTYRAC 1 cut(s) 721
HinfI GANTC 4 cut(s) 104, 257, 518, 914
HpaII CCGG 4 cut(s) 8, 119, 149, 522
HphI GGTGA 3 cut(s) 589, 750, 1226
Hpy166II GTNNAC 1 cut(s) 721
Hpy188I TCNGA 7 cut(s) 97, 138, 196, 375, 424, 664, 919
Hpy188III TCNNGA 4 cut(s) 284, 578, 911, 1070
Hpy8I GTNNAC 1 cut(s) 721
HpyAV CCTTC 3 cut(s) 73, 659, 799
HpyCH4III ACNGT 1 cut(s) 273
HpyCH4IV ACGT 2 cut(s) 239, 769
HpyF10VI GCNNNNNNNGC 9 cut(s) 53, 81, 90, 158, 650, 785, 794, 1157, 1199
HpyF3I CTNAG 2 cut(s) 439, 1058
HpySE526I ACGT 2 cut(s) 239, 769
Hsp92I GRCGYC 1 cut(s) 45
HspAI GCGC 2 cut(s) 45, 468
KasI GGCGCC 1 cut(s) 44
Kzo9I GATC 7 cut(s) 4, 133, 202, 816, 836, 994, 1051
LmnI GCTCC 5 cut(s) 90, 98, 121, 129, 1282
Lsp1109I GCAGC 6 cut(s) 84, 736, 766, 794, 797, 1261
LweI GCATC 3 cut(s) 337, 418, 440
MaeI CTAG 1 cut(s) 1038
MaeII ACGT 2 cut(s) 239, 769
MaeIII GTNAC 1 cut(s) 889
MalI GATC 7 cut(s) 6, 135, 204, 818, 838, 996, 1053
MboI GATC 7 cut(s) 4, 133, 202, 816, 836, 994, 1051
MboII GAAGA 3 cut(s) 5, 58, 1178
MflI RGATCY 2 cut(s) 4, 994
MhlI GDGCHC 3 cut(s) 95, 126, 1195
Mly113I GGCGCC 1 cut(s) 45
MlyI GAGTC 2 cut(s) 113, 908
MmeI TCCRAC 2 cut(s) 207, 321
Mph1103I ATGCAT 3 cut(s) 433, 1184, 1294
MseI TTAA 3 cut(s) 870, 1229, 1263
MslI CAYNNNNRTG 3 cut(s) 882, 987, 1111
MspI CCGG 4 cut(s) 8, 119, 149, 522
MvnI CGCG 1 cut(s) 23
MwoI GCNNNNNNNGC 9 cut(s) 53, 81, 90, 158, 650, 785, 794, 1157, 1199
NarI GGCGCC 1 cut(s) 45
NcoI CCATGG 1 cut(s) 1096
NdeI CATATG 1 cut(s) 984
NdeII GATC 7 cut(s) 4, 133, 202, 816, 836, 994, 1051
NheI GCTAGC 1 cut(s) 1037
NlaIV GGNNCC 6 cut(s) 6, 46, 540, 610, 996, 1194
NmuCI GTSAC 1 cut(s) 889
NsiI ATGCAT 3 cut(s) 433, 1184, 1294
NspI RCATGY 3 cut(s) 484, 719, 1182
PagI TCATGA 1 cut(s) 577
PciI ACATGT 1 cut(s) 480
PfeI GAWTC 2 cut(s) 257, 518
PflMI CCANNNNNTGG 3 cut(s) 226, 395, 1031
PkrI GCNGC 7 cut(s) 74, 751, 781, 784, 787, 1090, 1276
PleI GAGTC 2 cut(s) 112, 908
PluTI GGCGCC 1 cut(s) 48
PpsI GAGTC 2 cut(s) 112, 908
PscI ACATGT 1 cut(s) 480
PshBI ATTAAT 1 cut(s) 1229
Psp124BI GAGCTC 2 cut(s) 95, 126
PspN4I GGNNCC 6 cut(s) 6, 46, 540, 610, 996, 1194
PspPI GGNCC 3 cut(s) 25, 398, 609
PstI CTGCAG 2 cut(s) 784, 799
PsuI RGATCY 2 cut(s) 4, 994
RsaI GTAC 2 cut(s) 479, 670
RsaNI GTAC 2 cut(s) 478, 669
RseI CAYNNNNRTG 3 cut(s) 882, 987, 1111
SacI GAGCTC 2 cut(s) 95, 126
SaqAI TTAA 3 cut(s) 870, 1229, 1263
SatI GCNGC 7 cut(s) 73, 750, 780, 783, 786, 1089, 1275
Sau3AI GATC 7 cut(s) 4, 133, 202, 816, 836, 994, 1051
Sau96I GGNCC 3 cut(s) 25, 398, 609
SchI GAGTC 2 cut(s) 113, 908
SduI GDGCHC 3 cut(s) 95, 126, 1195
SfaNI GCATC 3 cut(s) 337, 418, 440
SfcI CTRYAG 3 cut(s) 303, 780, 795
SfoI GGCGCC 1 cut(s) 46
SinI GGWCC 3 cut(s) 25, 398, 609
SmiMI CAYNNNNRTG 3 cut(s) 882, 987, 1111
SmlI CTYRAG 1 cut(s) 1007
SmoI CTYRAG 1 cut(s) 1007
SsiI CCGC 6 cut(s) 23, 82, 88, 159, 314, 1088
SspDI GGCGCC 1 cut(s) 44
SspMI CTAG 1 cut(s) 1038
SstI GAGCTC 2 cut(s) 95, 126
StyI CCWWGG 2 cut(s) 534, 1096
TaaI ACNGT 1 cut(s) 273
TaiI ACGT 2 cut(s) 242, 772
TaqI TCGA 4 cut(s) 102, 353, 950, 976
TaqII GACCGA 1 cut(s) 829
TatI WGTACW 1 cut(s) 477
TauI GCSGC 1 cut(s) 1091
TfiI GAWTC 2 cut(s) 257, 518
Tru1I TTAA 3 cut(s) 870, 1229, 1263
Tru9I TTAA 3 cut(s) 870, 1229, 1263
TscAI CASTG 4 cut(s) 619, 634, 894, 1118
TseFI GTSAC 1 cut(s) 889
TseI GCWGC 6 cut(s) 72, 749, 779, 782, 785, 1274
Tsp45I GTSAC 1 cut(s) 889
TspDTI ATGAA 5 cut(s) 405, 531, 566, 763, 1179
TspGWI ACGGA 4 cut(s) 22, 213, 250, 307
TspRI CASTG 4 cut(s) 619, 634, 894, 1118
Van91I CCANNNNNTGG 3 cut(s) 226, 395, 1031
VpaK11BI GGWCC 3 cut(s) 25, 398, 609
VspI ATTAAT 1 cut(s) 1229
XapI RAATTY 5 cut(s) 368, 507, 573, 957, 1265
XceI RCATGY 3 cut(s) 484, 719, 1182
XcmI CCANNNNNNNNNTGG 2 cut(s) 461, 555
XspI CTAG 1 cut(s) 1038
Zsp2I ATGCAT 3 cut(s) 433, 1184, 1294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.