MD01G1151900.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
25987970 .. 25991033
3064 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1151900.v1.1.491

Sequence Viewer

Length: 2808 bp
ATGAGACAGATAGACAGTCATTGCTTGCATTTTAAAGCTAAAATCATGAACGACCCACTGGGCATTCTTAGCTCTTGGAATGAATCCCTCCACTTCTGCCAGTGGCAAGGCATTGCTTGTGGCCGCAGACACCAGAGAGTCACCGTGCTGGACCTTGAATCAAGCCGGCTGAATGTTGGTCATTTGTTCCATCTGCAACAAATACGCCTTGGTAACAACTCCTTCAGTGGTGATATTCCATTCAACATATCACGTTGCTCTAACCTCCAAATACTTCACATAGCTGGAAACCATCTTAGGGGTAAACTTCCAATTGAAATTAGCTCCTTGTCCAAGCTTCAGGTACTTGCTTTAAGCAAAAACACTTTAAGTGGGGAAATCCCACCTTCTTTTGGAAATCTTTCTTCTCTCCAGGTGTTATCTGTGGAAGAAAATAATCTGCTTGGAGGTATTCCGAATAGCCTTGGCCAGTTGAAAAGACTAACATATCTTTCATTGGGTCAAAATTATTTGAATGGTACCATCCTTCCCTCCATATACAACCTCTCATCAATTACACACATTTATGTGTACCTAAACGAACTGCATGGAACTCTTCCCCCTGGGTTAGGCCACACTATATTTCCAAACCTCCAACACTTTTATTTCTGGTCCAACCAATTCAGTGGACCCATACCAAATTCAATCTCCAATGCCTCAAACCTTTCACTTTTTTTAATCTCATTCAACGAGTTTACAGGAAAAGTGCCTAGTCTTGCACGCCTGCCAAATCTGTATTTGTTAACACTTTCCGATAACAATCTTGGAAATGATGAGGAAGGTGACTTGGATTTCATCTCTTCTCTAGTTAATTGCACCAAATTGACAGAGTTTGATTTTAGTGGCAATAATTTTGGAGGAGTGCTACCTGAATCCATCGGCAATCTCTCAACAGAGCTCAACACACTGGTATTTGGTCATAACCAGATACATGGAAGAATTCCCGTTGGGATCGGAAATCTAGTTAACTTGGAGTCACTAGCCTCTGAGGGAAACCTATTGACAGGCATAATACCAAGTTCTATTGGTAAACTAAAAAGGTTGGATGCTCTGTATCTGAACGAGAATAAACTATCAGGTACCATCCCATCTTCTCTTGGAAATCTAACTTCAATGACCGAGTTGATTCTCATGTCAAACAAATTAGAAGGCAACATACCGCAAAGTCTCGGAGAATGCAGGAATCTTCTACTTCTAGTTCTTTCCCAAAATAATCTTCGCGGTCAAATTCCTAAAGAAGTTATTGGTTTAGCATCCCTGTCACAATTTTTGGATCTATCCATCAACAAGCTTACTGGATCCATACCAATGGAGGTAAGCAACTTGATGCATCTAGTTTACTTGGATGTTTCTGACAATAAGTTATCTGGTGAGATTCCACGAAGTTTAGGGAGTTGTACAAGTTTGGCAACTCTGAATCTGAGTGGAAACTCATTGCAGGGGACCATTCCTGAATCCTTGAGCTCTTTGAGAGGGATTGAGAATTTCGACCTCTCTCACAACAACTTATCTGGCAGAATTCCCGACTATTTGGAGAGATTCCACTTCTTGCTGAAATTGAACCTCTCGTTTAATGATTTTGAAGGTGCATTACCAATGAAAGGAGTTTTCGAGAACACAAGTGCGTTTTCTGTCATGGGAAACTCAAGGATTTGTGGAGGTATTCCTTCTTTAAGATTGCCCCAATGCATCTCCAAGCAATCTAAGCAAGGCTTATCTTCTAGGCTCAAAATAATTCTCTCAGTTTCTGGTGGGGTTATTGGGTTGATCTTAGTGTTGTCCGTTGTGCTTCTTTGCCGATCAAGAAAAGTGAGAGCACTTAACTCAACTTCAGGATCGTATCTAATGGTTTCACTCTTGGAATTGTCTTATGGAGATCTCCATAAAGCAACAGATGGGTTCTCGGCTGCGAATTTGATTGGTGGTGGAAGTTTTGGGTCTGTATTCAAGGCAATTCTCAATCAGCATGAACAAAGAATTGTTGCAGTGAAAGTACTCAGTCAAAATTCAAGGGCTTCTAAAAGTTTCATAGCTGAATGTGAAGCCTTGAAAAGCATTAGGCACCGAAATCTTGTCAAACTACTGACTGCTTGTTCAAGCATTGATTCTCAAGGAAACGATTTCAAAGCTCTGGTTTACGAGTTCAAGGTGAACGGAAGCGTCAACGACTGGCTGCATAATTCAGCTCAACGGGTTAACAATCCAACCAATCTGCAGAAAAATCTGAATCTTATTCAGATAGTCAACATTGCAATTGATGTAGCGTGTGCTATGGATTATTTGCACAACGGTTCTTACATGCCGATAGTTCATTGTGATTTAAAGCCGAGCAACGTTCTCTTGGGTGGTGACATGACTGCATCTGTTGGTGATTTTGGTTTGGCAAGGTTCCTCCCAGACGTTTCTCGTCCATTTCCTGTGCACGAAAGCTCTTCCGATGCAATAAAAGGCTCCATAGGCTATACTGCCCCAGGCAAGAGGCCAACGGATGACATGTTCAATGACGGTCTGAATCTGCACAGCTTTGTTGTGAATGCATTTCCTGAACACGTGGAAGAAATATGTGATCCGCTACTTCTTCAAAAAGAAGAAAAAAATGGTGGGGATCAAAGGCAAAAAGTTGAGGAGTGCTTGATTTCACTTGCAAGAATAGGAGTTGCTTGTTCTTCAGCAATGCCGAGAGAGCGCAAGGACATGACCATTGTTGTATCTGAGTTGTGTCTTATAAGGGATGTGCTGATGGGTACCAGGATGCCTAGAGATTGTTAG

Protein Analysis

936

Amino Acids

102.09

Weight (kDa)

6.95

Isoelectric Point (pI)

41.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 11 - 40 7.3e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 56 - 271 1.7e-19 Leucine-rich repeat region
LRR_8 PF13855 112 - 171 2.4e-06 Leucine rich repeat
LRR_14 PF23598 322 - 412 4.3e-08 Leucine-rich repeat region
LRR_14 PF23598 402 - 514 7.6e-06 Leucine-rich repeat region
Pkinase PF00069 650 - 837 1.7e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 651 - 814 1.7e-28 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2765
Acc65I GGTACC 3 cut(s) 518, 1118, 2783
AccB1I GGYRCC 4 cut(s) 518, 1118, 2100, 2783
AccII CGCG 1 cut(s) 1260
AciI CCGC 4 cut(s) 124, 1199, 1260, 2609
AclI AACGTT 1 cut(s) 2373
AclWI GGATC 7 cut(s) 998, 1320, 1332, 1345, 1882, 2600, 2652
AcoI YGGCCR 2 cut(s) 121, 466
AcsI RAATTY 7 cut(s) 679, 978, 1266, 1522, 1557, 1951, 2044
AcuI CTGAAG 4 cut(s) 208, 323, 1854, 2691
AcvI CACGTG 1 cut(s) 2590
AfaI GTAC 7 cut(s) 345, 520, 572, 1120, 1438, 2034, 2785
AfiI CCNNNNNNNGG 4 cut(s) 298, 392, 608, 1640
AflIII ACRYGT 2 cut(s) 2532, 2587
AjnI CCWGG 4 cut(s) 411, 601, 2509, 2786
AjuI GAANNNNNNNTTGG 2 cut(s) 1239, 1271
AloI GAACNNNNNNTCC 2 cut(s) 2519, 2551
Alw21I GWGCWC 4 cut(s) 939, 1505, 1858, 2463
Alw26I GTCTC 1 cut(s) 1211
Alw44I GTGCAC 1 cut(s) 2459
AlwI GGATC 7 cut(s) 998, 1320, 1332, 1345, 1882, 2600, 2652
AlwNI CAGNNNCTG 1 cut(s) 1787
AoxI GGCC 4 cut(s) 121, 466, 610, 2519
ApaLI GTGCAC 1 cut(s) 2459
ApeKI GCWGC 2 cut(s) 1946, 2212
ApoI RAATTY 7 cut(s) 679, 978, 1266, 1522, 1557, 1951, 2044
Asp700I GAANNNNTTC 1 cut(s) 400
Asp718I GGTACC 3 cut(s) 518, 1118, 2783
AspLEI GCGC 1 cut(s) 2727
AspS9I GGNCC 4 cut(s) 151, 651, 668, 1482
AsuHPI GGTGA 7 cut(s) 133, 242, 833, 1421, 2200, 2399, 2420
AvaII GGWCC 4 cut(s) 151, 651, 668, 1482
BaeGI GKGCMC 1 cut(s) 2463
BalI TGGCCA 1 cut(s) 468
BamHI GGATCC 1 cut(s) 1337
BanI GGYRCC 4 cut(s) 518, 1118, 2100, 2783
BanII GRGCYC 2 cut(s) 939, 1505
BarI GAAGNNNNNNTAC 4 cut(s) 1179, 1211, 1614, 1646
BbrPI CACGTG 1 cut(s) 2590
Bbv12I GWGCWC 4 cut(s) 939, 1505, 1858, 2463
BbvI GCAGC 2 cut(s) 1933, 2199
BccI CCATC 9 cut(s) 198, 300, 530, 923, 1130, 1135, 1328, 1928, 2773
BciT130I CCWGG 4 cut(s) 413, 603, 2511, 2788
BcoDI GTCTC 1 cut(s) 1211
BfaI CTAG 8 cut(s) 750, 845, 1001, 1019, 1235, 1373, 1761, 2796
BfmI CTRYAG 1 cut(s) 2252
BglII AGATCT 1 cut(s) 1915
BisI GCNGC 3 cut(s) 124, 1947, 2213
BlsI GCNGC 3 cut(s) 125, 1948, 2214
BmcAI AGTACT 1 cut(s) 2034
Bme1390I CCNGG 4 cut(s) 413, 603, 2511, 2788
Bme18I GGWCC 4 cut(s) 151, 651, 668, 1482
BmgT120I GGNCC 4 cut(s) 151, 651, 668, 1482
BmiI GGNNCC 9 cut(s) 520, 670, 1120, 1339, 1483, 2102, 2429, 2491, 2785
BmrFI CCNGG 4 cut(s) 413, 603, 2511, 2788
BmrI ACTGGG 1 cut(s) 68
BmsI GCATC 8 cut(s) 1075, 1301, 1356, 1378, 1737, 2408, 2467, 2781
BmuI ACTGGG 1 cut(s) 68
BpmI CTGGAG 1 cut(s) 395
BpuEI CTTGAG 3 cut(s) 1519, 1669, 2133
BsaAI YACGTR 1 cut(s) 2590
BsaBI GATNNNNATC 1 cut(s) 798
BsaJI CCNNGG 5 cut(s) 208, 463, 601, 602, 2509
Bsc4I CCNNNNNNNGG 4 cut(s) 298, 392, 608, 1640
Bse118I RCCGGY 1 cut(s) 165
Bse1I ACTGG 6 cut(s) 63, 100, 469, 951, 1339, 2213
Bse3DI GCAATG 5 cut(s) 19, 111, 1472, 2286, 2718
Bse8I GATNNNNATC 1 cut(s) 798
BseBI CCWGG 4 cut(s) 413, 603, 2511, 2788
BseDI CCNNGG 5 cut(s) 208, 463, 601, 602, 2509
BseGI GGATG 8 cut(s) 522, 1090, 1122, 1292, 1390, 2533, 2776, 2796
BseJI GATNNNNATC 1 cut(s) 798
BseLI CCNNNNNNNGG 4 cut(s) 298, 392, 608, 1640
BseMI GCAATG 5 cut(s) 19, 111, 1472, 2286, 2718
BseMII CTCAG 5 cut(s) 1017, 1451, 1794, 2050, 2742
BseNI ACTGG 6 cut(s) 63, 100, 469, 951, 1339, 2213
BseRI GAGGAG 2 cut(s) 912, 2678
BseSI GKGCMC 1 cut(s) 2463
BseXI GCAGC 2 cut(s) 1933, 2199
BsgI GTGCAG 1 cut(s) 2540
Bsh1236I CGCG 1 cut(s) 1260
BshFI GGCC 4 cut(s) 123, 468, 612, 2521
BshNI GGYRCC 4 cut(s) 518, 1118, 2100, 2783
BsiHKAI GWGCWC 4 cut(s) 939, 1505, 1858, 2463
BsiSI CCGG 1 cut(s) 166
BslFI GGGAC 1 cut(s) 1495
BslI CCNNNNNNNGG 4 cut(s) 298, 392, 608, 1640
BsmAI GTCTC 1 cut(s) 1211
BsmFI GGGAC 1 cut(s) 1495
BsmI GAATGC 3 cut(s) 63, 1220, 2578
BsnI GGCC 4 cut(s) 123, 468, 612, 2521
Bsp1286I GDGCHC 4 cut(s) 939, 1505, 1858, 2463
Bsp1407I TGTACA 1 cut(s) 1436
Bsp143I GATC 9 cut(s) 990, 1312, 1337, 1806, 1838, 1874, 1915, 2605, 2644
BspACI CCGC 4 cut(s) 124, 1199, 1260, 2609
BspANI GGCC 4 cut(s) 123, 468, 612, 2521
BspCNI CTCAG 5 cut(s) 1018, 1452, 1793, 2049, 2743
BspFNI CGCG 1 cut(s) 1260
BspHI TCATGA 1 cut(s) 45
BspLI GGNNCC 9 cut(s) 520, 670, 1120, 1339, 1483, 2102, 2429, 2491, 2785
BspMAI CTGCAG 1 cut(s) 2256
BspPI GGATC 7 cut(s) 998, 1320, 1332, 1345, 1882, 2600, 2652
BspQI GCTCTTC 1 cut(s) 2476
BspT107I GGYRCC 4 cut(s) 518, 1118, 2100, 2783
BsrDI GCAATG 5 cut(s) 19, 111, 1472, 2286, 2718
BsrFI RCCGGY 1 cut(s) 165
BsrGI TGTACA 1 cut(s) 1436
BsrI ACTGG 6 cut(s) 63, 100, 469, 951, 1339, 2213
BssAI RCCGGY 1 cut(s) 165
BssECI CCNNGG 5 cut(s) 208, 463, 601, 602, 2509
BssMI GATC 9 cut(s) 990, 1312, 1337, 1806, 1838, 1874, 1915, 2605, 2644
BssT1I CCWWGG 2 cut(s) 208, 463
Bst2UI CCWGG 4 cut(s) 413, 603, 2511, 2788
Bst4CI ACNGT 4 cut(s) 17, 145, 2330, 2546
Bst6I CTCTTC 3 cut(s) 600, 844, 2476
BstAUI TGTACA 1 cut(s) 1436
BstBAI YACGTR 1 cut(s) 2590
BstC8I GCNNGC 4 cut(s) 26, 167, 760, 764
BstDEI CTNAG 9 cut(s) 68, 296, 1026, 1460, 1743, 1780, 1810, 2036, 2751
BstENI CCTNNNNNAGG 1 cut(s) 606
BstF5I GGATG 8 cut(s) 522, 1090, 1122, 1292, 1390, 2533, 2776, 2796
BstFNI CGCG 1 cut(s) 1260
BstHHI GCGC 1 cut(s) 2727
BstKTI GATC 9 cut(s) 993, 1315, 1340, 1809, 1841, 1877, 1918, 2608, 2647
BstMAI GTCTC 1 cut(s) 1211
BstMBI GATC 9 cut(s) 990, 1312, 1337, 1806, 1838, 1874, 1915, 2605, 2644
BstMWI GCNNNNNNNGC 4 cut(s) 69, 1744, 2496, 2722
BstNI CCWGG 4 cut(s) 413, 603, 2511, 2788
BstNSI RCATGY 2 cut(s) 2341, 2536
BstSCI CCNGG 4 cut(s) 411, 601, 2509, 2786
BstSFI CTRYAG 1 cut(s) 2252
BstSLI GKGCMC 1 cut(s) 2463
BstUI CGCG 1 cut(s) 1260
BstV1I GCAGC 2 cut(s) 1933, 2199
BstX2I RGATCY 3 cut(s) 1312, 1337, 1915
BstXI CCANNNNNNTGG 3 cut(s) 665, 971, 1348
BstYI RGATCY 3 cut(s) 1312, 1337, 1915
BsuRI GGCC 4 cut(s) 123, 468, 612, 2521
BtsCI GGATG 8 cut(s) 522, 1090, 1122, 1292, 1390, 2533, 2776, 2796
BtsI GCAGTG 1 cut(s) 2031
BtsIMutI CAGTG 6 cut(s) 56, 107, 232, 670, 944, 2031
Cac8I GCNNGC 4 cut(s) 26, 167, 760, 764
CaiI CAGNNNCTG 1 cut(s) 1787
CciI TCATGA 1 cut(s) 45
CfoI GCGC 1 cut(s) 2727
Cfr10I RCCGGY 1 cut(s) 165
Cfr13I GGNCC 4 cut(s) 151, 651, 668, 1482
CseI GACGC 1 cut(s) 2188
Csp6I GTAC 7 cut(s) 344, 519, 571, 1119, 1437, 2033, 2784
CviQI GTAC 7 cut(s) 344, 519, 571, 1119, 1437, 2033, 2784
DdeI CTNAG 9 cut(s) 68, 296, 1026, 1460, 1743, 1780, 1810, 2036, 2751
DpnI GATC 9 cut(s) 992, 1314, 1339, 1808, 1840, 1876, 1917, 2607, 2646
DpnII GATC 9 cut(s) 990, 1312, 1337, 1806, 1838, 1874, 1915, 2605, 2644
DraI TTTAAA 2 cut(s) 34, 2361
EaeI YGGCCR 2 cut(s) 121, 466
Eam1104I CTCTTC 3 cut(s) 600, 844, 2476
EarI CTCTTC 3 cut(s) 600, 844, 2476
Ecl136II GAGCTC 2 cut(s) 937, 1503
Eco130I CCWWGG 2 cut(s) 208, 463
Eco24I GRGCYC 2 cut(s) 939, 1505
Eco47I GGWCC 4 cut(s) 151, 651, 668, 1482
Eco53kI GAGCTC 2 cut(s) 937, 1503
Eco57I CTGAAG 4 cut(s) 208, 323, 1854, 2691
Eco72I CACGTG 1 cut(s) 2590
EcoICRI GAGCTC 2 cut(s) 937, 1503
EcoNI CCTNNNNNAGG 1 cut(s) 606
EcoRI GAATTC 2 cut(s) 978, 1557
EcoRII CCWGG 4 cut(s) 411, 601, 2509, 2786
EcoT14I CCWWGG 2 cut(s) 208, 463
EcoT22I ATGCAT 3 cut(s) 1371, 1730, 2578
EcoT38I GRGCYC 2 cut(s) 939, 1505
ErhI CCWWGG 2 cut(s) 208, 463
FalI AAGNNNNNCTT 2 cut(s) 1736, 1768
FaqI GGGAC 1 cut(s) 1495
Fnu4HI GCNGC 3 cut(s) 124, 1947, 2213
FokI GGATG 8 cut(s) 509, 1097, 1109, 1279, 1397, 2540, 2783, 2803
FriOI GRGCYC 2 cut(s) 939, 1505
Fsp4HI GCNGC 3 cut(s) 124, 1947, 2213
FspBI CTAG 8 cut(s) 750, 845, 1001, 1019, 1235, 1373, 1761, 2796
GlaI GCGC 1 cut(s) 2726
GluI GCNGC 3 cut(s) 124, 1947, 2213
GsuI CTGGAG 1 cut(s) 395
HaeIII GGCC 4 cut(s) 123, 468, 612, 2521
HapII CCGG 1 cut(s) 166
HgaI GACGC 1 cut(s) 2188
HhaI GCGC 1 cut(s) 2727
Hin6I GCGC 1 cut(s) 2725
HinP1I GCGC 1 cut(s) 2725
HincII GTYRAC 5 cut(s) 783, 1006, 2203, 2236, 2284
HindII GTYRAC 5 cut(s) 783, 1006, 2203, 2236, 2284
HindIII AAGCTT 2 cut(s) 335, 1328
HpaI GTTAAC 3 cut(s) 783, 1006, 2236
HpaII CCGG 1 cut(s) 166
HphI GGTGA 7 cut(s) 133, 242, 833, 1421, 2200, 2399, 2420
Hpy188III TCNNGA 7 cut(s) 46, 1490, 1562, 1651, 1842, 1872, 2582
HpyAV CCTTC 7 cut(s) 232, 396, 536, 812, 1181, 1616, 1716
HpyCH4III ACNGT 4 cut(s) 17, 145, 2330, 2546
HpyCH4IV ACGT 4 cut(s) 253, 2373, 2439, 2589
HpyF10VI GCNNNNNNNGC 4 cut(s) 69, 1744, 2496, 2722
HpyF3I CTNAG 9 cut(s) 68, 296, 1026, 1460, 1743, 1780, 1810, 2036, 2751
HpySE526I ACGT 4 cut(s) 253, 2373, 2439, 2589
HspAI GCGC 1 cut(s) 2725
KpnI GGTACC 3 cut(s) 522, 1122, 2787
KroI GCCGGC 1 cut(s) 165
KroNI GCCGGC 1 cut(s) 167
KspAI GTTAAC 3 cut(s) 783, 1006, 2236
Kzo9I GATC 9 cut(s) 990, 1312, 1337, 1806, 1838, 1874, 1915, 2605, 2644
LguI GCTCTTC 1 cut(s) 2476
LmnI GCTCC 2 cut(s) 329, 2495
Lsp1109I GCAGC 2 cut(s) 1933, 2199
LweI GCATC 8 cut(s) 1075, 1301, 1356, 1378, 1737, 2408, 2467, 2781
MaeI CTAG 8 cut(s) 750, 845, 1001, 1019, 1235, 1373, 1761, 2796
MaeII ACGT 4 cut(s) 253, 2373, 2439, 2589
MaeIII GTNAC 6 cut(s) 139, 212, 821, 1014, 1299, 2387
MalI GATC 9 cut(s) 992, 1314, 1339, 1808, 1840, 1876, 1917, 2607, 2646
MboI GATC 9 cut(s) 990, 1312, 1337, 1806, 1838, 1874, 1915, 2605, 2644
MfeI CAATTG 2 cut(s) 312, 2292
MflI RGATCY 3 cut(s) 1312, 1337, 1915
MhlI GDGCHC 4 cut(s) 939, 1505, 1858, 2463
MlsI TGGCCA 1 cut(s) 468
MluNI TGGCCA 1 cut(s) 468
MlyI GAGTC 2 cut(s) 147, 1022
MmeI TCCRAC 4 cut(s) 658, 678, 1062, 2267
Mox20I TGGCCA 1 cut(s) 468
Mph1103I ATGCAT 3 cut(s) 1371, 1730, 2578
MroNI GCCGGC 1 cut(s) 165
MroXI GAANNNNTTC 1 cut(s) 400
MscI TGGCCA 1 cut(s) 468
MslI CAYNNNNRTG 3 cut(s) 564, 566, 1346
Msp20I TGGCCA 1 cut(s) 468
MspI CCGG 1 cut(s) 166
MspR9I CCNGG 4 cut(s) 413, 603, 2511, 2788
MunI CAATTG 2 cut(s) 312, 2292
Mva1269I GAATGC 3 cut(s) 63, 1220, 2578
MvaI CCWGG 4 cut(s) 413, 603, 2511, 2788
MvnI CGCG 1 cut(s) 1260
MwoI GCNNNNNNNGC 4 cut(s) 69, 1744, 2496, 2722
NaeI GCCGGC 1 cut(s) 167
NdeII GATC 9 cut(s) 990, 1312, 1337, 1806, 1838, 1874, 1915, 2605, 2644
NgoMIV GCCGGC 1 cut(s) 165
NlaIV GGNNCC 9 cut(s) 520, 670, 1120, 1339, 1483, 2102, 2429, 2491, 2785
NmeAIII GCCGAG 3 cut(s) 1922, 2391, 2742
NmuCI GTSAC 5 cut(s) 139, 821, 1014, 1299, 2387
NsiI ATGCAT 3 cut(s) 1371, 1730, 2578
NspI RCATGY 2 cut(s) 2341, 2536
PagI TCATGA 1 cut(s) 45
PasI CCCWGGG 1 cut(s) 602
PciI ACATGT 1 cut(s) 2532
PciSI GCTCTTC 1 cut(s) 2476
PctI GAATGC 3 cut(s) 63, 1220, 2578
PdiI GCCGGC 1 cut(s) 167
PdmI GAANNNNTTC 1 cut(s) 400
PkrI GCNGC 3 cut(s) 125, 1948, 2214
PleI GAGTC 2 cut(s) 146, 1021
PmaCI CACGTG 1 cut(s) 2590
PmlI CACGTG 1 cut(s) 2590
PpsI GAGTC 2 cut(s) 146, 1021
Ppu21I YACGTR 1 cut(s) 2590
PscI ACATGT 1 cut(s) 2532
PsiI TTATAA 1 cut(s) 2765
Psp124BI GAGCTC 2 cut(s) 939, 1505
Psp1406I AACGTT 1 cut(s) 2373
Psp6I CCWGG 4 cut(s) 411, 601, 2509, 2786
PspCI CACGTG 1 cut(s) 2590
PspGI CCWGG 4 cut(s) 411, 601, 2509, 2786
PspN4I GGNNCC 9 cut(s) 520, 670, 1120, 1339, 1483, 2102, 2429, 2491, 2785
PspPI GGNCC 4 cut(s) 151, 651, 668, 1482
PstI CTGCAG 1 cut(s) 2256
PstNI CAGNNNCTG 1 cut(s) 1787
PsuI RGATCY 3 cut(s) 1312, 1337, 1915
RsaI GTAC 7 cut(s) 345, 520, 572, 1120, 1438, 2034, 2785
RsaNI GTAC 7 cut(s) 344, 519, 571, 1119, 1437, 2033, 2784
RseI CAYNNNNRTG 3 cut(s) 564, 566, 1346
SacI GAGCTC 2 cut(s) 939, 1505
SapI GCTCTTC 1 cut(s) 2476
SatI GCNGC 3 cut(s) 124, 1947, 2213
Sau3AI GATC 9 cut(s) 990, 1312, 1337, 1806, 1838, 1874, 1915, 2605, 2644
Sau96I GGNCC 4 cut(s) 151, 651, 668, 1482
ScaI AGTACT 1 cut(s) 2034
SchI GAGTC 2 cut(s) 147, 1022
ScrFI CCNGG 4 cut(s) 413, 603, 2511, 2788
SduI GDGCHC 4 cut(s) 939, 1505, 1858, 2463
SfaNI GCATC 8 cut(s) 1075, 1301, 1356, 1378, 1737, 2408, 2467, 2781
SfcI CTRYAG 1 cut(s) 2252
SinI GGWCC 4 cut(s) 151, 651, 668, 1482
SmiMI CAYNNNNRTG 3 cut(s) 564, 566, 1346
SmlI CTYRAG 3 cut(s) 1498, 1684, 2148
SmoI CTYRAG 3 cut(s) 1498, 1684, 2148
SsiI CCGC 4 cut(s) 124, 1199, 1260, 2609
SspMI CTAG 8 cut(s) 750, 845, 1001, 1019, 1235, 1373, 1761, 2796
SstI GAGCTC 2 cut(s) 939, 1505
StyD4I CCNGG 4 cut(s) 411, 601, 2509, 2786
StyI CCWWGG 2 cut(s) 208, 463
TaaI ACNGT 4 cut(s) 17, 145, 2330, 2546
TaiI ACGT 4 cut(s) 256, 2376, 2442, 2592
TaqI TCGA 2 cut(s) 1527, 1650
TaqII GACCGA 1 cut(s) 1172
TatI WGTACW 2 cut(s) 1436, 2032
TauI GCSGC 1 cut(s) 126
TscAI CASTG 6 cut(s) 63, 107, 232, 670, 951, 2031
TseFI GTSAC 5 cut(s) 139, 821, 1014, 1299, 2387
TseI GCWGC 2 cut(s) 1946, 2212
Tsp45I GTSAC 5 cut(s) 139, 821, 1014, 1299, 2387
TspDTI ATGAA 8 cut(s) 62, 96, 483, 823, 1652, 2022, 2056, 2339
TspGWI ACGGA 3 cut(s) 1810, 2208, 2540
TspRI CASTG 6 cut(s) 63, 107, 232, 670, 951, 2031
VneI GTGCAC 1 cut(s) 2459
VpaK11BI GGWCC 4 cut(s) 151, 651, 668, 1482
XagI CCTNNNNNAGG 1 cut(s) 606
XapI RAATTY 7 cut(s) 679, 978, 1266, 1522, 1557, 1951, 2044
XceI RCATGY 2 cut(s) 2341, 2536
XmnI GAANNNNTTC 1 cut(s) 400
XspI CTAG 8 cut(s) 750, 845, 1001, 1019, 1235, 1373, 1761, 2796
ZrmI AGTACT 1 cut(s) 2034
Zsp2I ATGCAT 3 cut(s) 1371, 1730, 2578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.