pycom07g18340
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
20809532 .. 20812798
3267 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g18340.1

Sequence Viewer

Length: 3150 bp
ATGGAGTTCCCAGGTATCCTCCTTACTACTTGGTTTATTTTCGTGCAACTCTTTCTTTTTACCTCTGCCTCTTCCTCGCTTCTAGTAGGAAATGAGGTGGATAGGCTGTCCTTGCTTGCCTTTAAAGCTGAAATCACAACCGATACACTCGGAATCCTGAGCTCCTGGAATGCATCCCTACATTTCTGTCAGTGGCCTGGTATTACCTGCGGCCGCAGACACAAGAGAGTCATGGTGCTTGACCTTCAATCAAGCCGGCTGGTAGGGTCGCTATCCCCCCACATTGGAAACTTGAGCTTTTTGAGAGAGTTAAACCTCCCAAACAATAGCTTCAGTGGCACCATCCCTCCAGAAATTGGTCGTTTGTTCCGGTTGCAACGACTACAGCTTCAAAACAACTCCTTCAGTGGTCGTATTCCATTCAACATATCACATTGCTCTAACCTCCGTAACCTTGCCTTATCTGGCAACGCTCTTAGTGGCGGACTTTCAACTGAAATTGGGTCATTGGCGAAGCTTGAGGTACTTCTTTTAGGCAGGAATAATTTTAGTGGGAAAATCCCATCTTCGTTTGGGAATCTTTCTTCTCTTCAGGTGCTATCTGCGGCACAAAATAATCTGCAGGGAGGTATTCCAAATAGCCTTGGCCAGTTGAAAAGTTTAACATTTATTTCATTGGGGCCAAATTATTTGACAGGTACCATCCCTCCATCCATATACAACCTCTCTTCTATTACAATCATTTCGGTGGTTCAAAACCAACTTGATGGAACTCTTCCTCCTGGTTTGGGCCACACTATATTCCCCAACCTTGAAGATTTTCGCTTCCATTTCAACCAATTCACTGGACCAATACCAACTACAATCTCCAATGCATCCAACCTTGCAATATTTGGAATCTCAGAAAATAAGTTTACCGGAAGAATACCTAGCCTGGCAAGGATGTCCAATCTGTTCCGGTTAGCAATAGATGTTAACAATCTTGGAAATAATGAGATAGGTGACTTGGACTTTCTCTCTTCTCTGGTTAATTGCACCAATTTAGAGCATTTGGACATCAGTTCCAATCATTTTGGAGGAGTGCTACCTGAATCTGTCAGCAATCTCTCAATAAAGCTCGAGGCAATGGAAATGGGGTGGAATCAGATACGCGGAAGCATTCCTTCTAAGATTGGAAATTTCGTCAACTTGGGGAGCTTACACTTTGAGGAAAACCTATTGAGAGGCCCTATACCAAGCTCAATTTCTAAACTAGATAAACTAGTTTATTTGTATTTGGATCACAATGAGCTGTCAGGTACTATCCCACCTTCAATAGGCAATCTATCTTCACTAGAAGTATTAGATCTCATGTCCAATTTCTTACAAGGACGCACACCGCAAGGTCTTGGTAATTGCTGGCGTTTGATAGGCTTGCATCTTTCTCAAAATAATCTTAGCGGTCCCATTCCACTACAAGTTTTGTCAGCCTTGACACATGTTGTGTATCTGGACCTATCCAGAAACCAACTTACCGGATCCATTCCTTTGGAAGTAGGCAACATGGATTCACTTGACATCTTGGATCTTTCCGCGAACATGTTATCTGGTGAAGTCCCAGGAATTTTAGGGAGATGCATGGGTTTGAGAAGTCTGTATCTTAGTGGAAACTTGTTTCAGGGAACAATTCCTCAATCCTTGAGTTCTCTAAGAGGGATTGAAAATTTGGACCTCTCTCGTAACAACTTGTCTGGCGGAATTCCCAACTATTTGGGGAGTTTCCGTTTCTTGCAGAACTTGAACCTATCACATAATGATCTTGAAGGTGCAGTACCAACGGAAGGAATTTTCACAAATAGAACTGCATTTTATATCAAGGGAAACATACGGCTTTGTGGAGGTATACCTGAGTTACAATTGCCCATATGCAACTCCAGCAACTCCAACAATAAGCAAGATATATTTCTATGGCAAAAAGTACTTATCTCAATTGCTTGTGGGATCGGTATTGGAGTTATCTTACTATTGTGCTTCATCCTTCTTTATCCAGCCAGAAAAGCATTGCGCTTTGTGCTTCTTTATCTATCAAGCAAAGCGAGATCGATGTTAACTTTAGGATCATCATGGGATGTTTCACTCTTGAAAGTTTCATACGGAGATCTCCTCAAAGCAACTAATGGGTTCTCTTCTCGGAATTTGATTGGTGCTGGTAGCTTTGGGTCTGTGTACAGGGGAATTCTCAATCAGGAAGAAAGAATTGTTGCAGTGAAAGTACTCAGTGCTCATCGTTCAAGAGAGAGTTTTATGGTTGAATGTGAAACCTTGAAATATATTAGGCACCGAAATCTTGTCAAACTACTGACCGTGTGCGTAAGTATCGATTTTCAAGGGAATGATTTCATAGCTTTGGTTTATGAATTCATGACGAATGGAAATCTAGAAGAGTGGCTACATTTTTCAGCTCATAGACTACCTGGGGCACCGATTGTGCAGGGGCGTTTGAACCTTACTCAGAGGGTAAACATTGCCATCGACATAGCTAATGCTCTGAATTATTTTCACAACCACTCTCACATGCCAATTGTTCATTGCGATTTGAAGCCCAGCAACGTTCTCTTGGAAGGCGACATGACTGCCCGTGTTGCTGATTTTGGTTTAGCAAGGTACCTCCCGGATGCTTCGTGTTCACTTCCTTCACAAAGAAGCACTGCCAATGTCATAAATGGCTCGATAGGCTATATCGCCCCAGAGTATGGCATGGGAAACGAGGTTTCAACATATGGAGACGTGTATAGCTACGGAATCCTACTGTTAGAGATGCTTACTGGAAAAAGGCCTACAGATGAGATGTTCAAAGATGATCTGAACCTGAACAACTTTGTTCGGATAGCTTTGCCTGAACTTGTAGAAGAAATATGTGATCCGGTACTTCTTCAAATAAAAGAAAGCAGCACTCATAGTATTGCATCCAACGGTAGGAATCAGGTTCAAGATGATCAAAGGCAACGAGTTAGGAAGTGCTTGGTTATCATGGCCAGGATAGGAGTTGCTTGTTCTGCAGATTTGCCGAGAGAGCGGATGGATATTGGACATGTTGTAGAAGGATTATGCCTAGCAAGGGATGTACTAACTGGAACCTCGATTCGTAGAAATCATATGATCACAGCCTAA

Protein Analysis

1050

Amino Acids

115.05

Weight (kDa)

7.32

Isoelectric Point (pI)

34.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 70 8.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 143 - 226 1.3e-07 Leucine-rich repeat region
LRR_8 PF13855 172 - 231 8.2e-06 Leucine rich repeat
LRR_14 PF23598 385 - 453 9.9e-08 Leucine-rich repeat region
LRR_8 PF13855 444 - 504 6.7e-06 Leucine rich repeat
LRR_14 PF23598 472 - 598 1.4e-06 Leucine-rich repeat region
LRR_8 PF13855 541 - 600 4.7e-06 Leucine rich repeat
Pkinase PF00069 723 - 951 4.5e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 725 - 947 5e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 215
Acc65I GGTACC 2 cut(s) 698, 2643
AccB1I GGYRCC 5 cut(s) 338, 698, 2316, 2458, 2643
AccB7I CCANNNNNTGG 2 cut(s) 356, 2732
AccBSI CCGCTC 1 cut(s) 3055
AccI GTMKAC 1 cut(s) 1882
AccII CGCG 2 cut(s) 1152, 1574
AclI AACGTT 1 cut(s) 2589
AclWI GGATC 7 cut(s) 1287, 1512, 1525, 1572, 1988, 2104, 2894
AcoI YGGCCR 3 cut(s) 211, 646, 3012
AcsI RAATTY 8 cut(s) 1177, 1602, 1702, 1737, 1824, 2173, 2214, 2396
AcuI CTGAAG 3 cut(s) 316, 388, 575
AfiI CCNNNNNNNGG 8 cut(s) 284, 356, 788, 1316, 1820, 2732, 2955, 3097
AflIII ACRYGT 4 cut(s) 1477, 1578, 2766, 3070
AhlI ACTAGT 1 cut(s) 1261
AjiI CACGTC 1 cut(s) 2767
AjnI CCWGG 8 cut(s) 10, 164, 196, 781, 933, 1597, 2452, 3014
AjuI GAANNNNNNNTTGG 2 cut(s) 1228, 1260
AloI GAACNNNNNNTCC 2 cut(s) 763, 795
Alw21I GWGCWC 2 cut(s) 164, 2263
Alw26I GTCTC 1 cut(s) 2757
AlwI GGATC 7 cut(s) 1287, 1512, 1525, 1572, 1988, 2104, 2894
Ama87I CYCGRG 1 cut(s) 1118
AoxI GGCC 8 cut(s) 194, 211, 646, 680, 790, 1225, 2813, 3012
ApeKI GCWGC 1 cut(s) 2928
ApoI RAATTY 8 cut(s) 1177, 1602, 1702, 1737, 1824, 2173, 2214, 2396
Asp700I GAANNNNTTC 2 cut(s) 819, 2375
Asp718I GGTACC 2 cut(s) 698, 2643
AspLEI GCGC 1 cut(s) 2046
AspS9I GGNCC 7 cut(s) 680, 790, 848, 1226, 1442, 1492, 1708
AsuC2I CCSGG 1 cut(s) 2651
AsuHPI GGTGA 2 cut(s) 1013, 1601
AvaI CYCGRG 1 cut(s) 1118
AvaII GGWCC 4 cut(s) 848, 1442, 1492, 1708
BaeGI GKGCMC 1 cut(s) 2461
BalI TGGCCA 2 cut(s) 648, 3014
BamHI GGATCC 1 cut(s) 1517
BanI GGYRCC 5 cut(s) 338, 698, 2316, 2458, 2643
BanII GRGCYC 1 cut(s) 164
BarI GAAGNNNNNNTAC 4 cut(s) 1794, 1826, 2412, 2444
Bbv12I GWGCWC 2 cut(s) 164, 2263
BbvI GCAGC 1 cut(s) 2940
BccI CCATC 7 cut(s) 350, 571, 710, 718, 761, 2516, 3052
BceAI ACGGC 1 cut(s) 1883
BcgI CGANNNNNNTGC 2 cut(s) 2594, 2628
BciT130I CCWGG 8 cut(s) 12, 166, 198, 783, 935, 1599, 2454, 3016
BciVI GTATCC 1 cut(s) 26
BclI TGATCA 2 cut(s) 2974, 3138
BcnI CCSGG 1 cut(s) 2651
BcoDI GTCTC 1 cut(s) 2757
BcuI ACTAGT 1 cut(s) 1261
BfaI CTAG 7 cut(s) 83, 930, 1253, 1262, 1334, 2417, 3092
BfmI CTRYAG 4 cut(s) 383, 620, 2817, 3036
BfuAI ACCTGC 1 cut(s) 215
BfuI GTATCC 1 cut(s) 26
BglII AGATCT 2 cut(s) 1345, 2137
BisI GCNGC 4 cut(s) 211, 214, 606, 2929
BlsI GCNGC 4 cut(s) 212, 215, 607, 2930
BmcAI AGTACT 2 cut(s) 1959, 2253
Bme1390I CCNGG 9 cut(s) 12, 166, 198, 783, 935, 1599, 2454, 2651, 3016
Bme18I GGWCC 4 cut(s) 848, 1442, 1492, 1708
BmeT110I CYCGRG 1 cut(s) 1118
BmgBI CACGTC 1 cut(s) 2767
BmgT120I GGNCC 7 cut(s) 680, 790, 848, 1226, 1442, 1492, 1708
BmiI GGNNCC 9 cut(s) 340, 681, 700, 1444, 1519, 2318, 2460, 2645, 3115
BmrFI CCNGG 9 cut(s) 12, 166, 198, 783, 935, 1599, 2454, 2651, 3016
BmsI GCATC 7 cut(s) 182, 884, 1426, 1604, 2644, 2787, 2954
BplI GAGNNNNNCTC 2 cut(s) 2127, 2159
BpmI CTGGAG 2 cut(s) 333, 1897
Bpu10I CCTNAGC 1 cut(s) 158
BpuEI CTTGAG 3 cut(s) 313, 539, 1699
BpuMI CCSGG 1 cut(s) 2651
Bsa29I ATCGAT 2 cut(s) 2081, 2358
BsaJI CCNNGG 4 cut(s) 10, 643, 1597, 2453
BsaWI WCCGGW 5 cut(s) 369, 917, 957, 1514, 2902
BsaXI ACNNNNNCTCC 8 cut(s) 331, 361, 691, 721, 763, 793, 1747, 1777
Bsc4I CCNNNNNNNGG 8 cut(s) 284, 356, 788, 1316, 1820, 2732, 2955, 3097
Bse118I RCCGGY 1 cut(s) 255
Bse1I ACTGG 4 cut(s) 649, 850, 2809, 3115
Bse3DI GCAATG 5 cut(s) 433, 1131, 2039, 2502, 2566
BseBI CCWGG 8 cut(s) 12, 166, 198, 783, 935, 1599, 2454, 3016
BseCI ATCGAT 2 cut(s) 2081, 2358
BseDI CCNNGG 4 cut(s) 10, 643, 1597, 2453
BseLI CCNNNNNNNGG 8 cut(s) 284, 356, 788, 1316, 1820, 2732, 2955, 3097
BseMI GCAATG 5 cut(s) 433, 1131, 2039, 2502, 2566
BseMII CTCAG 5 cut(s) 149, 915, 1878, 2269, 2504
BseNI ACTGG 4 cut(s) 649, 850, 2809, 3115
BseRI GAGGAG 2 cut(s) 1092, 2132
BseSI GKGCMC 1 cut(s) 2461
BseX3I CGGCCG 1 cut(s) 211
BseXI GCAGC 1 cut(s) 2940
BseYI CCCAGC 1 cut(s) 2582
BsgI GTGCAG 2 cut(s) 1827, 2489
Bsh1236I CGCG 2 cut(s) 1152, 1574
Bsh1285I CGRYCG 1 cut(s) 214
BshFI GGCC 8 cut(s) 196, 213, 648, 682, 792, 1227, 2815, 3014
BshNI GGYRCC 5 cut(s) 338, 698, 2316, 2458, 2643
BshVI ATCGAT 2 cut(s) 2081, 2358
BsiEI CGRYCG 1 cut(s) 214
BsiHKAI GWGCWC 2 cut(s) 164, 2263
BsiHKCI CYCGRG 1 cut(s) 1118
BsiSI CCGG 7 cut(s) 256, 370, 918, 958, 1515, 2651, 2903
BslFI GGGAC 2 cut(s) 1428, 1580
BslI CCNNNNNNNGG 8 cut(s) 284, 356, 788, 1316, 1820, 2732, 2955, 3097
BsmAI GTCTC 1 cut(s) 2757
BsmBI CGTCTC 1 cut(s) 2757
BsmFI GGGAC 2 cut(s) 1428, 1580
BsmI GAATGC 2 cut(s) 175, 1158
BsnI GGCC 8 cut(s) 196, 213, 648, 682, 792, 1227, 2815, 3014
BsoBI CYCGRG 1 cut(s) 1118
Bsp1286I GDGCHC 3 cut(s) 164, 2263, 2461
Bsp1407I TGTACA 1 cut(s) 2205
BspANI GGCC 8 cut(s) 196, 213, 648, 682, 792, 1227, 2815, 3014
BspCNI CTCAG 5 cut(s) 150, 914, 1879, 2268, 2503
BspDI ATCGAT 2 cut(s) 2081, 2358
BspFNI CGCG 2 cut(s) 1152, 1574
BspHI TCATGA 1 cut(s) 2400
BspLI GGNNCC 9 cut(s) 340, 681, 700, 1444, 1519, 2318, 2460, 2645, 3115
BspMAI CTGCAG 2 cut(s) 624, 3040
BspMI ACCTGC 1 cut(s) 215
BspPI GGATC 7 cut(s) 1287, 1512, 1525, 1572, 1988, 2104, 2894
BspT107I GGYRCC 5 cut(s) 338, 698, 2316, 2458, 2643
BsrBI CCGCTC 1 cut(s) 3055
BsrDI GCAATG 5 cut(s) 433, 1131, 2039, 2502, 2566
BsrFI RCCGGY 1 cut(s) 255
BsrGI TGTACA 1 cut(s) 2205
BsrI ACTGG 4 cut(s) 649, 850, 2809, 3115
BssAI RCCGGY 1 cut(s) 255
BssECI CCNNGG 4 cut(s) 10, 643, 1597, 2453
BssNAI GTATAC 1 cut(s) 1883
BssT1I CCWWGG 1 cut(s) 643
Bst1107I GTATAC 1 cut(s) 1883
Bst2UI CCWGG 8 cut(s) 12, 166, 198, 783, 935, 1599, 2454, 3016
Bst4CI ACNGT 3 cut(s) 2344, 2790, 2954
Bst6I CTCTTC 7 cut(s) 76, 594, 733, 780, 1024, 2170, 2415
BstAUI TGTACA 1 cut(s) 2205
BstC8I GCNNGC 4 cut(s) 117, 257, 1400, 1415
BstENI CCTNNNNNAGG 1 cut(s) 1314
BstFNI CGCG 2 cut(s) 1152, 1574
BstHHI GCGC 1 cut(s) 2046
BstMAI GTCTC 1 cut(s) 2757
BstMCI CGRYCG 1 cut(s) 214
BstNI CCWGG 8 cut(s) 12, 166, 198, 783, 935, 1599, 2454, 3016
BstNSI RCATGY 4 cut(s) 1481, 1582, 2557, 3074
BstSCI CCNGG 9 cut(s) 10, 164, 196, 781, 933, 1597, 2452, 2649, 3014
BstSFI CTRYAG 4 cut(s) 383, 620, 2817, 3036
BstSLI GKGCMC 1 cut(s) 2461
BstUI CGCG 2 cut(s) 1152, 1574
BstV1I GCAGC 1 cut(s) 2940
BstX2I RGATCY 4 cut(s) 1345, 1517, 1564, 2137
BstXI CCANNNNNNTGG 4 cut(s) 767, 845, 1528, 1750
BstYI RGATCY 4 cut(s) 1345, 1517, 1564, 2137
BstZ17I GTATAC 1 cut(s) 1883
BstZI CGGCCG 1 cut(s) 211
Bsu15I ATCGAT 2 cut(s) 2081, 2358
BsuI GTATCC 1 cut(s) 26
BsuRI GGCC 8 cut(s) 196, 213, 648, 682, 792, 1227, 2815, 3014
BsuTUI ATCGAT 2 cut(s) 2081, 2358
BtrI CACGTC 1 cut(s) 2767
BtsI GCAGTG 2 cut(s) 2250, 2685
BtsIMutI CAGTG 7 cut(s) 197, 340, 412, 843, 2250, 2263, 2685
BveI ACCTGC 1 cut(s) 215
Cac8I GCNNGC 4 cut(s) 117, 257, 1400, 1415
CciI TCATGA 1 cut(s) 2400
CciNI GCGGCCGC 1 cut(s) 211
CfoI GCGC 1 cut(s) 2046
Cfr10I RCCGGY 1 cut(s) 255
Cfr13I GGNCC 7 cut(s) 680, 790, 848, 1226, 1442, 1492, 1708
ClaI ATCGAT 2 cut(s) 2081, 2358
CseI GACGC 1 cut(s) 1380
DraI TTTAAA 1 cut(s) 124
EaeI YGGCCR 3 cut(s) 211, 646, 3012
EagI CGGCCG 1 cut(s) 211
Eam1104I CTCTTC 7 cut(s) 76, 594, 733, 780, 1024, 2170, 2415
EarI CTCTTC 7 cut(s) 76, 594, 733, 780, 1024, 2170, 2415
EciI GGCGGA 2 cut(s) 498, 1749
Ecl136II GAGCTC 1 cut(s) 162
EclXI CGGCCG 1 cut(s) 211
Eco130I CCWWGG 1 cut(s) 643
Eco147I AGGCCT 1 cut(s) 2815
Eco24I GRGCYC 1 cut(s) 164
Eco47I GGWCC 4 cut(s) 848, 1442, 1492, 1708
Eco52I CGGCCG 1 cut(s) 211
Eco53kI GAGCTC 1 cut(s) 162
Eco57I CTGAAG 3 cut(s) 316, 388, 575
Eco88I CYCGRG 1 cut(s) 1118
EcoICRI GAGCTC 1 cut(s) 162
EcoNI CCTNNNNNAGG 1 cut(s) 1314
EcoO109I RGGNCCY 1 cut(s) 1226
EcoRI GAATTC 3 cut(s) 1737, 2214, 2396
EcoRII CCWGG 8 cut(s) 10, 164, 196, 781, 933, 1597, 2452, 3014
EcoT14I CCWWGG 1 cut(s) 643
EcoT22I ATGCAT 3 cut(s) 175, 877, 1619
EcoT38I GRGCYC 1 cut(s) 164
ErhI CCWWGG 1 cut(s) 643
Esp3I CGTCTC 1 cut(s) 2757
FalI AAGNNNNNCTT 2 cut(s) 1147, 1179
FaqI GGGAC 2 cut(s) 1428, 1580
FauNDI CATATG 3 cut(s) 1904, 2758, 3135
FbaI TGATCA 2 cut(s) 2974, 3138
FblI GTMKAC 1 cut(s) 1882
Fnu4HI GCNGC 4 cut(s) 211, 214, 606, 2929
FriOI GRGCYC 1 cut(s) 164
Fsp4HI GCNGC 4 cut(s) 211, 214, 606, 2929
FspBI CTAG 7 cut(s) 83, 930, 1253, 1262, 1334, 2417, 3092
GlaI GCGC 1 cut(s) 2045
GluI GCNGC 4 cut(s) 211, 214, 606, 2929
GsaI CCCAGC 1 cut(s) 2586
GsuI CTGGAG 2 cut(s) 333, 1897
HaeIII GGCC 8 cut(s) 196, 213, 648, 682, 792, 1227, 2815, 3014
HapII CCGG 7 cut(s) 256, 370, 918, 958, 1515, 2651, 2903
HgaI GACGC 1 cut(s) 1380
HhaI GCGC 1 cut(s) 2046
Hin6I GCGC 1 cut(s) 2044
HinP1I GCGC 1 cut(s) 2044
HincII GTYRAC 3 cut(s) 976, 1186, 2088
HindII GTYRAC 3 cut(s) 976, 1186, 2088
HindIII AAGCTT 1 cut(s) 515
HpaI GTTAAC 2 cut(s) 976, 2088
HpaII CCGG 7 cut(s) 256, 370, 918, 958, 1515, 2651, 2903
HphI GGTGA 2 cut(s) 1013, 1601
Hpy166II GTNNAC 8 cut(s) 915, 976, 1186, 1883, 2088, 2206, 2500, 2666
Hpy188I TCNGA 8 cut(s) 152, 904, 1146, 2172, 2493, 2529, 2844, 2865
Hpy8I GTNNAC 8 cut(s) 915, 976, 1186, 1883, 2088, 2206, 2500, 2666
HpyCH4III ACNGT 3 cut(s) 2344, 2790, 2954
HpyCH4IV ACGT 2 cut(s) 2589, 2766
HpySE526I ACGT 2 cut(s) 2589, 2766
HspAI GCGC 1 cut(s) 2044
KpnI GGTACC 2 cut(s) 702, 2647
KroI GCCGGC 1 cut(s) 255
KroNI GCCGGC 1 cut(s) 257
Ksp22I TGATCA 2 cut(s) 2974, 3138
KspAI GTTAAC 2 cut(s) 976, 2088
LmnI GCTCC 2 cut(s) 167, 1194
Lsp1109I GCAGC 1 cut(s) 2940
LweI GCATC 7 cut(s) 182, 884, 1426, 1604, 2644, 2787, 2954
MaeI CTAG 7 cut(s) 83, 930, 1253, 1262, 1334, 2417, 3092
MaeII ACGT 2 cut(s) 2589, 2766
MaeIII GTNAC 4 cut(s) 449, 1001, 1718, 1890
MbiI CCGCTC 1 cut(s) 3055
MfeI CAATTG 3 cut(s) 1895, 1968, 2559
MflI RGATCY 4 cut(s) 1345, 1517, 1564, 2137
MhlI GDGCHC 3 cut(s) 164, 2263, 2461
MlsI TGGCCA 2 cut(s) 648, 3014
MluNI TGGCCA 2 cut(s) 648, 3014
MlyI GAGTC 1 cut(s) 237
MmeI TCCRAC 3 cut(s) 903, 1947, 2973
Mox20I TGGCCA 2 cut(s) 648, 3014
Mph1103I ATGCAT 3 cut(s) 175, 877, 1619
MroNI GCCGGC 1 cut(s) 255
MroXI GAANNNNTTC 2 cut(s) 819, 2375
MscI TGGCCA 2 cut(s) 648, 3014
MseI TTAA 6 cut(s) 123, 311, 662, 975, 1029, 2087
MslI CAYNNNNRTG 1 cut(s) 746
Msp20I TGGCCA 2 cut(s) 648, 3014
MspI CCGG 7 cut(s) 256, 370, 918, 958, 1515, 2651, 2903
MspR9I CCNGG 9 cut(s) 12, 166, 198, 783, 935, 1599, 2454, 2651, 3016
MunI CAATTG 3 cut(s) 1895, 1968, 2559
Mva1269I GAATGC 2 cut(s) 175, 1158
MvaI CCWGG 8 cut(s) 12, 166, 198, 783, 935, 1599, 2454, 3016
MvnI CGCG 2 cut(s) 1152, 1574
NaeI GCCGGC 1 cut(s) 257
NciI CCSGG 1 cut(s) 2651
NdeI CATATG 3 cut(s) 1904, 2758, 3135
NgoMIV GCCGGC 1 cut(s) 255
NlaIV GGNNCC 9 cut(s) 340, 681, 700, 1444, 1519, 2318, 2460, 2645, 3115
NmeAIII GCCGAG 1 cut(s) 3072
NmuCI GTSAC 1 cut(s) 1001
NotI GCGGCCGC 1 cut(s) 211
NsiI ATGCAT 3 cut(s) 175, 877, 1619
NspI RCATGY 4 cut(s) 1481, 1582, 2557, 3074
PaeR7I CTCGAG 1 cut(s) 1118
PagI TCATGA 1 cut(s) 2400
PceI AGGCCT 1 cut(s) 2815
PciI ACATGT 3 cut(s) 1477, 1578, 3070
PctI GAATGC 2 cut(s) 175, 1158
PdiI GCCGGC 1 cut(s) 257
PdmI GAANNNNTTC 2 cut(s) 819, 2375
PfeI GAWTC 9 cut(s) 153, 577, 897, 1091, 1141, 1547, 2781, 2959, 3121
PflMI CCANNNNNTGG 2 cut(s) 356, 2732
PfoI TCCNGGA 2 cut(s) 164, 2649
PkrI GCNGC 4 cut(s) 212, 215, 607, 2930
PleI GAGTC 1 cut(s) 236
PpsI GAGTC 1 cut(s) 236
PscI ACATGT 3 cut(s) 1477, 1578, 3070
Psp124BI GAGCTC 1 cut(s) 164
Psp1406I AACGTT 1 cut(s) 2589
Psp6I CCWGG 8 cut(s) 10, 164, 196, 781, 933, 1597, 2452, 3014
PspFI CCCAGC 1 cut(s) 2582
PspGI CCWGG 8 cut(s) 10, 164, 196, 781, 933, 1597, 2452, 3014
PspN4I GGNNCC 9 cut(s) 340, 681, 700, 1444, 1519, 2318, 2460, 2645, 3115
PspPI GGNCC 7 cut(s) 680, 790, 848, 1226, 1442, 1492, 1708
PspXI VCTCGAGB 1 cut(s) 1118
PstI CTGCAG 2 cut(s) 624, 3040
PsuI RGATCY 4 cut(s) 1345, 1517, 1564, 2137
RseI CAYNNNNRTG 1 cut(s) 746
SacI GAGCTC 1 cut(s) 164
SaqAI TTAA 6 cut(s) 123, 311, 662, 975, 1029, 2087
SatI GCNGC 4 cut(s) 211, 214, 606, 2929
Sau96I GGNCC 7 cut(s) 680, 790, 848, 1226, 1442, 1492, 1708
ScaI AGTACT 2 cut(s) 1959, 2253
SchI GAGTC 1 cut(s) 237
ScrFI CCNGG 9 cut(s) 12, 166, 198, 783, 935, 1599, 2454, 2651, 3016
SduI GDGCHC 3 cut(s) 164, 2263, 2461
SfaNI GCATC 7 cut(s) 182, 884, 1426, 1604, 2644, 2787, 2954
SfcI CTRYAG 4 cut(s) 383, 620, 2817, 3036
Sfr274I CTCGAG 1 cut(s) 1118
SinI GGWCC 4 cut(s) 848, 1442, 1492, 1708
SlaI CTCGAG 1 cut(s) 1118
SmiMI CAYNNNNRTG 1 cut(s) 746
SmlI CTYRAG 4 cut(s) 292, 518, 1118, 1678
SmoI CTYRAG 4 cut(s) 292, 518, 1118, 1678
SpeI ACTAGT 1 cut(s) 1261
SseBI AGGCCT 1 cut(s) 2815
SspI AATATT 1 cut(s) 891
SspMI CTAG 7 cut(s) 83, 930, 1253, 1262, 1334, 2417, 3092
SstI GAGCTC 1 cut(s) 164
StuI AGGCCT 1 cut(s) 2815
StyD4I CCNGG 9 cut(s) 10, 164, 196, 781, 933, 1597, 2452, 2649, 3014
StyI CCWWGG 1 cut(s) 643
TaaI ACNGT 3 cut(s) 2344, 2790, 2954
TaiI ACGT 2 cut(s) 2592, 2769
TaqI TCGA 6 cut(s) 1119, 2081, 2358, 2511, 2708, 3119
TatI WGTACW 4 cut(s) 1957, 2205, 2251, 3103
TauI GCSGC 3 cut(s) 213, 216, 608
TfiI GAWTC 9 cut(s) 153, 577, 897, 1091, 1141, 1547, 2781, 2959, 3121
Tru1I TTAA 6 cut(s) 123, 311, 662, 975, 1029, 2087
Tru9I TTAA 6 cut(s) 123, 311, 662, 975, 1029, 2087
TscAI CASTG 7 cut(s) 197, 340, 412, 850, 2250, 2263, 2692
TseFI GTSAC 1 cut(s) 1001
TseI GCWGC 1 cut(s) 2928
Tsp45I GTSAC 1 cut(s) 1001
TspDTI ATGAA 7 cut(s) 663, 2002, 2118, 2368, 2389, 2409, 2555
TspGWI ACGGA 5 cut(s) 437, 1751, 1832, 2148, 2793
TspRI CASTG 7 cut(s) 197, 340, 412, 850, 2250, 2263, 2692
Van91I CCANNNNNTGG 2 cut(s) 356, 2732
VpaK11BI GGWCC 4 cut(s) 848, 1442, 1492, 1708
XagI CCTNNNNNAGG 1 cut(s) 1314
XapI RAATTY 8 cut(s) 1177, 1602, 1702, 1737, 1824, 2173, 2214, 2396
XbaI TCTAGA 1 cut(s) 2416
XceI RCATGY 4 cut(s) 1481, 1582, 2557, 3074
XhoI CTCGAG 1 cut(s) 1118
XmiI GTMKAC 1 cut(s) 1882
XmnI GAANNNNTTC 2 cut(s) 819, 2375
XspI CTAG 7 cut(s) 83, 930, 1253, 1262, 1334, 2417, 3092
ZrmI AGTACT 2 cut(s) 1959, 2253
Zsp2I ATGCAT 3 cut(s) 175, 877, 1619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.