RLG00000015055
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
61078759 .. 61081718
2960 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015055

Sequence Viewer

Length: 2319 bp
ATGCTGAACCTCAGCTCCCAAGGCTTCGCTGGCTCCATATCCCCACATATAGGAAATCTAAGCTTCTTAAGAGTGCTAGATCTCAAGAACAATAGCTTCACTCATCAAATCCCTCCTCAAATTGGGCATTTGCACAGATTGCAGTGTAGGAGCAAACCAATTTCAAGGAAGCCTTCCATCAAACTTGAGCAATGCTTTTCCCAACCTTCAAATCTTTTTAGTTCACATGAATCAATTTACAGGGGCCATCCCTTTGTCATTATCCAAGGCAACAAATCTTGTGATGTTTGTATTGTCGGTGATAATAATCTTGGAAGCAATATACATGGTGACTTGAGTTTTGTCTCAGAATTGATCAATGCCACACAACTTACTCAGTTGGACTTCTCTCACAACAATTTTGGAGGGACGTTGCCCACATCAATATCCAATCTCTCAACCAATCTCCGATGGCTTTTGCTTTCAGAAAACCAACTACATGGAAGCATCCTAACTGGATTGGGGAATCTTGTCAACTTGCAAATACTCTCTATGGGAGGTAACTACTTCATAGGTAGCATCCCCACAGACATTGGGCAGCTTTCAACGCTTGAGCGGTTCTATCTTTACAACAACCAATTATCGGGGAGCATTCCATCTTCTCTTGGAAATTTAACAATGTTAGCAGTTCTCATATTGCAAGAAAATAATCTACAGGGTAGCATCCCGTCCAGCCTAGGGAAATGCCACTGGTTAAATGAATTGAGTCTTTCTGGAAACAATCTGAATGGCACGATACCGCCCCAAGTTATTGGCCTCTCATCTTTATCAATAGGTTTGAGATTGGATAGAAACCAATTCACTGGTTCCCTTCCTATGGAGATTGGAAAATTGAAGAGTCTAGTTGTATTGAACATTTCTGACAACTTGTTATCAGGGGAACTTCCTAGTAGCCTCGGACTTGAGAGGGATTCGATATTTAGACCTTTCTCGAAACAATTTTTCAGGAGATATTCCACAGTTTTCGAGCGCTTTGGAAGTTTGGAGAATCTGAACCTATCTTTCAATCAATTTTGGGGAGTAGTACCAACTGAGGGTATCTTCAAGAATACAAGTGCTATTTCAGTTGCTGGAAACGCAAGACTCTGCGGAGGTATTGCTAAACTTCAACTTCCTGTGTGCAAGTCTAATGAGTCTAAAGGAGAAGGATTGTCTCGTAGAATGAAACTAGTGATCTCTTTAGTTTTCGGGTTCACTCTGTTGGGACTGGTTGTGGTGCTCGCTCTTTTCGTTTTTCTTCATAAGAAAAGGAAAGAAACTGAATTAAACACTTTTGGGAACTCTGTTTTGCAAGTTTCATATGCTACTCTTCTTAAAGCTACAGATGGGTTCTCTTCAGCTAATTTGATTGGAGTGGGTGCTTTTGGGTCTGTGTACAAAGGAATTCTTGCTGATGATGGAGTTGTTGTCGCTGTGAAGGTGCTTAACATGTTACACCGGGGAGCAACTAAGAGTTTCTTGGCCGAATGTGAGGCGTTGAGAAATATCAGACATCGAAATCTGGTTAAGATCTTAACTGCATGTTCAAGTATTGATTTTGTTGGCAATGAATTCAAGGCTCTTGTTTATGAGTTCATGGACAAAGAGAGCTTGGAAGAGTGGTTGCATCCATCTACTGGAATTGGAGAGATAACAGAAGCACCCAAAATTTTAAGTCTTATTCAGAGGCTCAACATTGCCATTAATGTTGCTAGTGCATTGGATTATCTTCACAACCATTGTGAAACACCGATCGTTCATTGCGATCTCAAGCCAAGTAATGTTCTTTTGGATGGTGACTTGACTGGACATGTTTCCGACTTTGGGCTATCAAGGTTTCTCTCAGAACCAACCACGAGCGTTTCTGGAAATCTATCCAGCTCCACTGCAATTAGAGGATCAATTGGTTATGCTGCACCAGAGTATGGTATGGGAAGTGAGGTATCCACATACGGGGATGTCTACAGCTTTGGCGTTCTCTTGTTAGAAATGTTTACGGGGAAGCGACCCACTGATCACATGTTCAGTGATAGCTTGAATCTTCATAATTATGTAAAGACAGCTCTCCCTGAACTTGTTTCCGAGATTTCAGAATCACTAGTTTTTCAAGAAGGCACCACCAATGTCGTTGAAGCTCATAGGCACAATAGATTGAGTGTGAGAGCACATAAAATTGAAGAGTGCTTGACTCGAATAGTTGGTATAGGAATTGCATGTTCTGTTGAATCCCCCAAAAACAGAAAGGATATCAGTGATGTTGCATTTGAATTGCAATCCATTAGGCGCAATCTTCTCGGCTAG

Protein Analysis

773

Amino Acids

84.33

Weight (kDa)

7.33

Isoelectric Point (pI)

39.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 148 - 251 6.2e-09 Leucine-rich repeat region
Pkinase PF00069 459 - 692 6.2e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 461 - 683 9.3e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2132
AccB7I CCANNNNNTGG 2 cut(s) 1655, 1943
AccBSI CCGCTC 1 cut(s) 595
AccI GTMKAC 1 cut(s) 1980
AciI CCGC 3 cut(s) 595, 779, 1128
AclWI GGATC 1 cut(s) 1924
AcoI YGGCCR 1 cut(s) 1500
AcsI RAATTY 4 cut(s) 649, 1422, 1589, 1686
AcuI CTGAAG 1 cut(s) 1359
AfaI GTAC 2 cut(s) 1065, 1415
AfeI AGCGCT 1 cut(s) 1010
AflII CTTAAG 1 cut(s) 67
AflIII ACRYGT 3 cut(s) 1467, 1828, 2037
AhlI ACTAGT 2 cut(s) 1207, 2116
AloI GAACNNNNNNTCC 1 cut(s) 31
Alw21I GWGCWC 2 cut(s) 1260, 2185
Alw26I GTCTC 2 cut(s) 349, 1197
AlwI GGATC 1 cut(s) 1924
AlwNI CAGNNNCTG 1 cut(s) 1109
Aor51HI AGCGCT 1 cut(s) 1010
AoxI GGCC 3 cut(s) 244, 793, 1500
ApeKI GCWGC 2 cut(s) 577, 1931
ApoI RAATTY 4 cut(s) 649, 1422, 1589, 1686
ArsI GACNNNNNNTTYG 2 cut(s) 323, 355
AseI ATTAAT 1 cut(s) 1722
AspA2I CCTAGG 1 cut(s) 715
AspLEI GCGC 2 cut(s) 1011, 2304
AspS9I GGNCC 1 cut(s) 244
AsuC2I CCSGG 1 cut(s) 1478
AsuHPI GGTGA 3 cut(s) 311, 341, 1826
AvrII CCTAGG 1 cut(s) 715
BanI GGYRCC 1 cut(s) 2132
BauI CACGAG 1 cut(s) 1873
Bbv12I GWGCWC 2 cut(s) 1260, 2185
BbvCI CCTCAGC 1 cut(s) 11
BbvI GCAGC 2 cut(s) 589, 1918
BccI CCATC 8 cut(s) 185, 255, 444, 643, 1358, 1430, 1657, 1805
BcgI CGANNNNNNTGC 1 cut(s) 2293
BciVI GTATCC 1 cut(s) 1972
BclI TGATCA 2 cut(s) 354, 2032
BcnI CCSGG 1 cut(s) 1478
BcoDI GTCTC 2 cut(s) 349, 1197
BcuI ACTAGT 2 cut(s) 1207, 2116
BfaI CTAG 8 cut(s) 77, 716, 881, 927, 1208, 1731, 2117, 2317
BfmI CTRYAG 3 cut(s) 692, 1359, 1981
BfoI RGCGCY 1 cut(s) 1012
BfrI CTTAAG 1 cut(s) 67
BfuI GTATCC 1 cut(s) 1972
BglII AGATCT 2 cut(s) 79, 1548
BisI GCNGC 2 cut(s) 578, 1932
BlnI CCTAGG 1 cut(s) 715
BlsI GCNGC 2 cut(s) 579, 1933
Bme1390I CCNGG 1 cut(s) 1478
BmgT120I GGNCC 1 cut(s) 244
BmiI GGNNCC 4 cut(s) 34, 245, 847, 2134
BmrFI CCNGG 1 cut(s) 1478
BmsI GCATC 4 cut(s) 495, 567, 711, 1654
Bpu10I CCTNAGC 1 cut(s) 11
BpuEI CTTGAG 6 cut(s) 68, 206, 355, 611, 962, 1772
BpuMI CCSGG 1 cut(s) 1478
BsaBI GATNNNNATC 1 cut(s) 306
BsaJI CCNNGG 5 cut(s) 19, 265, 715, 934, 1477
BsaXI ACNNNNNCTCC 3 cut(s) 29, 1431, 1461
Bse1I ACTGG 6 cut(s) 499, 734, 847, 1251, 1660, 1828
Bse3DI GCAATG 4 cut(s) 197, 1591, 1713, 1777
Bse8I GATNNNNATC 1 cut(s) 306
BseDI CCNNGG 5 cut(s) 19, 265, 715, 934, 1477
BseGI GGATG 7 cut(s) 247, 486, 558, 702, 1645, 1816, 1981
BseJI GATNNNNATC 1 cut(s) 306
BseMI GCAATG 4 cut(s) 197, 1591, 1713, 1777
BseMII CTCAG 5 cut(s) 25, 360, 389, 1062, 1875
BseNI ACTGG 6 cut(s) 499, 734, 847, 1251, 1660, 1828
BseRI GAGGAG 1 cut(s) 105
BseXI GCAGC 2 cut(s) 589, 1918
BsgI GTGCAG 1 cut(s) 1917
Bsh1285I CGRYCG 1 cut(s) 1773
BshFI GGCC 3 cut(s) 246, 795, 1502
BshNI GGYRCC 1 cut(s) 2132
BsiEI CGRYCG 1 cut(s) 1773
BsiHKAI GWGCWC 2 cut(s) 1260, 2185
BsiSI CCGG 1 cut(s) 1477
BslFI GGGAC 2 cut(s) 421, 1257
BsmAI GTCTC 2 cut(s) 349, 1197
BsmFI GGGAC 2 cut(s) 421, 1257
BsmI GAATGC 1 cut(s) 630
BsnI GGCC 3 cut(s) 246, 795, 1502
Bsp1286I GDGCHC 2 cut(s) 1260, 2185
Bsp1407I TGTACA 1 cut(s) 1413
Bsp143I GATC 8 cut(s) 79, 354, 1212, 1548, 1770, 1783, 1916, 2032
BspACI CCGC 3 cut(s) 595, 779, 1128
BspANI GGCC 3 cut(s) 246, 795, 1502
BspCNI CTCAG 5 cut(s) 24, 359, 388, 1063, 1874
BspLI GGNNCC 4 cut(s) 34, 245, 847, 2134
BspPI GGATC 1 cut(s) 1924
BspT107I GGYRCC 1 cut(s) 2132
BspTI CTTAAG 1 cut(s) 67
BsrBI CCGCTC 1 cut(s) 595
BsrDI GCAATG 4 cut(s) 197, 1591, 1713, 1777
BsrGI TGTACA 1 cut(s) 1413
BsrI ACTGG 6 cut(s) 499, 734, 847, 1251, 1660, 1828
BssECI CCNNGG 5 cut(s) 19, 265, 715, 934, 1477
BssMI GATC 8 cut(s) 79, 354, 1212, 1548, 1770, 1783, 1916, 2032
BssSI CACGAG 1 cut(s) 1873
BssT1I CCWWGG 3 cut(s) 19, 265, 715
Bst2BI CACGAG 1 cut(s) 1873
Bst4CI ACNGT 1 cut(s) 1000
Bst6I CTCTTC 5 cut(s) 869, 1353, 1378, 1629, 2190
BstAFI CTTAAG 1 cut(s) 67
BstAPI GCANNNNNTGC 1 cut(s) 139
BstAUI TGTACA 1 cut(s) 1413
BstC8I GCNNGC 2 cut(s) 31, 1260
BstDEI CTNAG 7 cut(s) 11, 59, 346, 375, 1071, 1488, 1861
BstF5I GGATG 7 cut(s) 247, 486, 558, 702, 1645, 1816, 1981
BstH2I RGCGCY 1 cut(s) 1012
BstHHI GCGC 2 cut(s) 1011, 2304
BstKTI GATC 8 cut(s) 82, 357, 1215, 1551, 1773, 1786, 1919, 2035
BstMAI GTCTC 2 cut(s) 349, 1197
BstMBI GATC 8 cut(s) 79, 354, 1212, 1548, 1770, 1783, 1916, 2032
BstMCI CGRYCG 1 cut(s) 1773
BstMWI GCNNNNNNNGC 5 cut(s) 21, 30, 139, 586, 1115
BstNSI RCATGY 5 cut(s) 1471, 1563, 1832, 2041, 2235
BstSCI CCNGG 1 cut(s) 1476
BstSFI CTRYAG 3 cut(s) 692, 1359, 1981
BstV1I GCAGC 2 cut(s) 589, 1918
BstX2I RGATCY 2 cut(s) 79, 1548
BstXI CCANNNNNNTGG 3 cut(s) 479, 791, 842
BstYI RGATCY 2 cut(s) 79, 1548
BsuI GTATCC 1 cut(s) 1972
BsuRI GGCC 3 cut(s) 246, 795, 1502
BtsCI GGATG 7 cut(s) 247, 486, 558, 702, 1645, 1816, 1981
BtsI GCAGTG 2 cut(s) 149, 1902
BtsIMutI CAGTG 7 cut(s) 149, 727, 840, 1902, 2028, 2050, 2275
Cac8I GCNNGC 2 cut(s) 31, 1260
CaiI CAGNNNCTG 1 cut(s) 1109
CfoI GCGC 2 cut(s) 1011, 2304
Cfr13I GGNCC 1 cut(s) 244
Csp6I GTAC 2 cut(s) 1064, 1414
CspCI CAANNNNNGTGG 2 cut(s) 553, 588
CviAII CATG 9 cut(s) 227, 326, 479, 1468, 1560, 1615, 1829, 2038, 2232
CviQI GTAC 2 cut(s) 1064, 1414
DdeI CTNAG 7 cut(s) 11, 59, 346, 375, 1071, 1488, 1861
DpnI GATC 8 cut(s) 81, 356, 1214, 1550, 1772, 1785, 1918, 2034
DpnII GATC 8 cut(s) 79, 354, 1212, 1548, 1770, 1783, 1916, 2032
EaeI YGGCCR 1 cut(s) 1500
Eam1104I CTCTTC 5 cut(s) 869, 1353, 1378, 1629, 2190
EarI CTCTTC 5 cut(s) 869, 1353, 1378, 1629, 2190
Eco130I CCWWGG 3 cut(s) 19, 265, 715
Eco32I GATATC 1 cut(s) 2266
Eco47III AGCGCT 1 cut(s) 1010
Eco57I CTGAAG 1 cut(s) 1359
EcoRI GAATTC 2 cut(s) 1422, 1589
EcoRV GATATC 1 cut(s) 2266
EcoT14I CCWWGG 3 cut(s) 19, 265, 715
ErhI CCWWGG 3 cut(s) 19, 265, 715
FaeI CATG 9 cut(s) 230, 329, 482, 1471, 1563, 1618, 1832, 2041, 2235
FalI AAGNNNNNCTT 6 cut(s) 157, 189, 1410, 1442, 1481, 1513
FaqI GGGAC 2 cut(s) 421, 1257
FatI CATG 9 cut(s) 226, 325, 478, 1467, 1559, 1614, 1828, 2037, 2231
FauNDI CATATG 1 cut(s) 1339
FbaI TGATCA 2 cut(s) 354, 2032
FblI GTMKAC 1 cut(s) 1980
Fnu4HI GCNGC 2 cut(s) 578, 1932
FokI GGATG 7 cut(s) 234, 473, 545, 689, 1632, 1823, 1988
Fsp4HI GCNGC 2 cut(s) 578, 1932
FspBI CTAG 8 cut(s) 77, 716, 881, 927, 1208, 1731, 2117, 2317
GlaI GCGC 2 cut(s) 1010, 2303
GluI GCNGC 2 cut(s) 578, 1932
HaeII RGCGCY 1 cut(s) 1012
HaeIII GGCC 3 cut(s) 246, 795, 1502
HapII CCGG 1 cut(s) 1477
HhaI GCGC 2 cut(s) 1011, 2304
Hin1II CATG 9 cut(s) 230, 329, 482, 1471, 1563, 1618, 1832, 2041, 2235
Hin6I GCGC 2 cut(s) 1009, 2302
HinP1I GCGC 2 cut(s) 1009, 2302
HincII GTYRAC 1 cut(s) 514
HindII GTYRAC 1 cut(s) 514
HindIII AAGCTT 1 cut(s) 61
HpaII CCGG 1 cut(s) 1477
HphI GGTGA 3 cut(s) 311, 341, 1826
Hpy166II GTNNAC 6 cut(s) 224, 514, 1233, 1414, 1981, 2013
Hpy188III TCNNGA 7 cut(s) 85, 753, 970, 985, 1084, 1884, 2126
Hpy8I GTNNAC 6 cut(s) 224, 514, 1233, 1414, 1981, 2013
HpyAV CCTTC 6 cut(s) 183, 216, 860, 1178, 1450, 2123
HpyCH4III ACNGT 1 cut(s) 1000
HpyCH4IV ACGT 1 cut(s) 410
HpyF10VI GCNNNNNNNGC 5 cut(s) 21, 30, 139, 586, 1115
HpyF3I CTNAG 7 cut(s) 11, 59, 346, 375, 1071, 1488, 1861
HpySE526I ACGT 1 cut(s) 410
Hsp92II CATG 9 cut(s) 230, 329, 482, 1471, 1563, 1618, 1832, 2041, 2235
HspAI GCGC 2 cut(s) 1009, 2302
Ksp22I TGATCA 2 cut(s) 354, 2032
Kzo9I GATC 8 cut(s) 79, 354, 1212, 1548, 1770, 1783, 1916, 2032
LmnI GCTCC 6 cut(s) 20, 38, 150, 627, 1481, 1904
Lsp1109I GCAGC 2 cut(s) 589, 1918
LweI GCATC 4 cut(s) 495, 567, 711, 1654
MaeI CTAG 8 cut(s) 77, 716, 881, 927, 1208, 1731, 2117, 2317
MaeII ACGT 1 cut(s) 410
MaeIII GTNAC 4 cut(s) 329, 539, 1470, 1814
MalI GATC 8 cut(s) 81, 356, 1214, 1550, 1772, 1785, 1918, 2034
MbiI CCGCTC 1 cut(s) 595
MboI GATC 8 cut(s) 79, 354, 1212, 1548, 1770, 1783, 1916, 2032
MfeI CAATTG 1 cut(s) 1920
MflI RGATCY 2 cut(s) 79, 1548
MhlI GDGCHC 2 cut(s) 1260, 2185
MlyI GAGTC 5 cut(s) 754, 886, 1116, 1181, 2200
MmeI TCCRAC 2 cut(s) 360, 1860
MslI CAYNNNNRTG 1 cut(s) 2067
MspCI CTTAAG 1 cut(s) 67
MspI CCGG 1 cut(s) 1477
MspR9I CCNGG 1 cut(s) 1478
MunI CAATTG 1 cut(s) 1920
Mva1269I GAATGC 1 cut(s) 630
MwoI GCNNNNNNNGC 5 cut(s) 21, 30, 139, 586, 1115
NciI CCSGG 1 cut(s) 1478
NdeI CATATG 1 cut(s) 1339
NdeII GATC 8 cut(s) 79, 354, 1212, 1548, 1770, 1783, 1916, 2032
NlaIII CATG 9 cut(s) 230, 329, 482, 1471, 1563, 1618, 1832, 2041, 2235
NlaIV GGNNCC 4 cut(s) 34, 245, 847, 2134
NmeAIII GCCGAG 1 cut(s) 2292
NmuCI GTSAC 2 cut(s) 329, 1814
NspI RCATGY 5 cut(s) 1471, 1563, 1832, 2041, 2235
PciI ACATGT 3 cut(s) 1467, 1828, 2037
PcsI WCGNNNNNNNCGW 2 cut(s) 1266, 1779
PctI GAATGC 1 cut(s) 630
PfeI GAWTC 7 cut(s) 230, 505, 950, 1027, 2056, 2111, 2243
PflMI CCANNNNNTGG 2 cut(s) 1655, 1943
PkrI GCNGC 2 cut(s) 579, 1933
Ple19I CGATCG 1 cut(s) 1773
PleI GAGTC 5 cut(s) 753, 885, 1116, 1180, 2200
PpsI GAGTC 5 cut(s) 753, 885, 1116, 1180, 2200
PscI ACATGT 3 cut(s) 1467, 1828, 2037
PshBI ATTAAT 1 cut(s) 1722
PspN4I GGNNCC 4 cut(s) 34, 245, 847, 2134
PspPI GGNCC 1 cut(s) 244
PstNI CAGNNNCTG 1 cut(s) 1109
PsuI RGATCY 2 cut(s) 79, 1548
PvuI CGATCG 1 cut(s) 1773
RsaI GTAC 2 cut(s) 1065, 1415
RsaNI GTAC 2 cut(s) 1064, 1414
RseI CAYNNNNRTG 1 cut(s) 2067
SatI GCNGC 2 cut(s) 578, 1932
Sau3AI GATC 8 cut(s) 79, 354, 1212, 1548, 1770, 1783, 1916, 2032
Sau96I GGNCC 1 cut(s) 244
SchI GAGTC 5 cut(s) 754, 886, 1116, 1181, 2200
ScrFI CCNGG 1 cut(s) 1478
SduI GDGCHC 2 cut(s) 1260, 2185
SfaNI GCATC 4 cut(s) 495, 567, 711, 1654
SfcI CTRYAG 3 cut(s) 692, 1359, 1981
SmiMI CAYNNNNRTG 1 cut(s) 2067
SmlI CTYRAG 7 cut(s) 67, 83, 185, 334, 590, 941, 1787
SmoI CTYRAG 7 cut(s) 67, 83, 185, 334, 590, 941, 1787
SpeI ACTAGT 2 cut(s) 1207, 2116
SsiI CCGC 3 cut(s) 595, 779, 1128
SspMI CTAG 8 cut(s) 77, 716, 881, 927, 1208, 1731, 2117, 2317
StyD4I CCNGG 1 cut(s) 1476
StyI CCWWGG 3 cut(s) 19, 265, 715
TaaI ACNGT 1 cut(s) 1000
TaiI ACGT 1 cut(s) 413
TaqI TCGA 5 cut(s) 953, 971, 1005, 1534, 2209
TatI WGTACW 1 cut(s) 1413
TfiI GAWTC 7 cut(s) 230, 505, 950, 1027, 2056, 2111, 2243
TscAI CASTG 7 cut(s) 149, 734, 847, 1909, 2035, 2050, 2275
TseFI GTSAC 2 cut(s) 329, 1814
TseI GCWGC 2 cut(s) 577, 1931
Tsp45I GTSAC 2 cut(s) 329, 1814
TspRI CASTG 7 cut(s) 149, 734, 847, 1909, 2035, 2050, 2275
Van91I CCANNNNNTGG 2 cut(s) 1655, 1943
Vha464I CTTAAG 1 cut(s) 67
VspI ATTAAT 1 cut(s) 1722
XapI RAATTY 4 cut(s) 649, 1422, 1589, 1686
XceI RCATGY 5 cut(s) 1471, 1563, 1832, 2041, 2235
XcmI CCANNNNNNNNNTGG 1 cut(s) 26
XmaJI CCTAGG 1 cut(s) 715
XmiI GTMKAC 1 cut(s) 1980
XspI CTAG 8 cut(s) 77, 716, 881, 927, 1208, 1731, 2117, 2317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.