RLG00000029277
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
35871591 .. 35874627
3037 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029277

Sequence Viewer

Length: 2922 bp
ATGGAGACCTCATACATGAGTGTGAGGATTTGGTCAGTATTTATGCTCCTGTTTCCCCTGATGATCATCACCTTGGCCTCTTCAAATAAAGAAGGAAATGACGTCGAAAGACTATCCTTGCTTGCCTTCAAATCTGAAATAGTCAGCGACACTCCTGGCATCATGAGCTCCTGGAGTGGTACTTCCAACTTATGTACGTGGCGAGGCATTACTTGCGACCAAAGACTCCAGAGAGTCACGGTTCTGGACCTCCAGTCAAGCCAGCTGAAGGGTATCCTATCTCCACACATCGGAAACTTGAGCTTTCTCAGGACATTAAATCTCCAAAACAATAGCTTCACCGGCACCATCCCTCAAGAAGTTGGTCGATTGTCCCGGCTGCAAGAACTACACCTCGGGGACAACTTGTTCAGAGGTGACATCCCCATCAATATATCTCATTGTTTTAATCTCCAGTCTCTTGTCTTGGCTAATAACACTCTTAGTGGGAAACTTCCAATGGAACTTGGCTCATTGGTCAATCTTCAAATACTTAGTTTCCGTAGGAACAATTTAGTTGGGGAAATTCCACCTTCTTTTGGAAATCTTTCTTCCCTTCAGTTCCTTTCTGTGGAAGAAAATAAGCTGTATGGTGGTCTCATGAATAGCCGCCTTGGGGAATTGAAAAGCTTACGGTATCTTGCATTGGGTTATAATAGATTGACTGGTACCATCCCTCTCTCCATGTACAACCTTTCTTCCATTCAACACATTTCTGTGATTGGAAACCAAATTCATGGAACTCTTCCTTCTGGGTTGGGCTACACAATATATCCTAACCTTCAAACCTTTCAGTTCCAGTTGAACAGATTCGGTGGACCAATTCCATTTACGATCTCAAACGCATCCCACCTTTCACGATTTGGGATCTCTAATAATAGTTTTACAGGAAAAGTCCCAAGTCTGGCAAGACTGTCCAATCTGGTTCGTTTGGAAATTGATGATAATAATCTTGGAAATGGGGATGGGGACTTGGATTTTCTCTCTTCTCTGGTGAATTGTACTGGTTTAGATCTTTTGGATATTAGTGGGAATAATTTTCAAGGAGTTCTACCTGAATCTATCAGCAATTTCTCAACAAAGCTCAAGGTAATGCGCTTAGGAAGGAATCAGCTACGTGGAAGCATTCCCACGGGGATAGGAAATTTCATCAACTTGTTTGAATTGAGCTTCGAGGAAAACCTATTGAGGGGCCCTATACCGAGTTCAATATGTAAGCCAAGTAAACTGTACAATCTGTTTATAAACCATAATCAGTTATCAGGTACTATCCCATCTTGTTTGGCAAATCTAACTTTGTTAAGCAGATTAGATCTCATGTCAAACAACTTACAAGGAAGCATACCAAAAAGTCTTGGTCAATGCAAGAATTTGTTGGTTTTGAATTTATCCAGTAACCAATTTACTGGATACATTCCCAATGAATTAGGTTCTTTGACTGAACTTCTTACTTTGAATCTTTCTGAAAATAGATTATCTGGTGAGATTCCACAAAGCTTAAGCGAATGCACACATTTGATGAGTTTAGACCTCTCATTTAATGATTTTGAAGGCGAAGTACCCATGGGAGGAGTTTTCTCTATTGAAGGTGCAGTTTCTCTCGAGGGAAACAGAGGTACCATTTTGTTGCCGCCGCCCACATGTAGTTCCGAGGGAAACAGAGGTGCCATTTTGCCGCCGCCCACATATACGCCTGACTTACCATCGAGAAAATCGAGAAAATCGTCTTCTATGAGGATATTAGTCATCTCACTCTCTTCTTTGGCCGCTGGGATTCTTTTGGTGTTGTGCTGTGTGTTCCTTTATAGATCAAATAAAAGGAAAGCCAAAGCTAAGTTAACTTCGATACCATTATTGGATATTTCACTCTTAAAACTGTCATATGGTGATCTCCTAAAAGCAACTGATGGCTTCTCTTCTCGGAATTTGATTGGCTCTGGTAGTTCTGGTTCTGTGTATTGGGGAGTTCTTGATCAACAGGAGGAAACAATTGTTGCTGTGAAAGTACTCAATCTTCAAAGTTCAAGAGCTTCTAGAAGTTTTGTAGCTGAATGTGAAGTCCTGAAAAGCATTAGGCACCGAAATCTTGTTAAACTAGTGACTGCTTGCTCAAGTATTGATTTTCAAGGAAATGAATTCAAAGCTTTGGTTTTTGAGTTCATGTTGGATGGAAATCTAGATGAAATGTTGCATTATTCAGCTCATTCAGTGGTTGGGGTGCCCAATGTGCAGGTGCATTTGAATCTTATCCAAAGGGTAAATATTGCCATTGATGTAGCTAATGCTTTGGATTATTTGCACAGTCGCTTTCACATCCCTATAGTTCATTGTGATTTAAAGCCGAGTAATGTTCTCCTAGAAAAGGACATGACTGCCCGTGTCTGTGATTTTGGGCTAGCAACCTACCTCCCAGATGCTTCTTCACTAGAGAGTTCTTCCAATATAATAAGGGGTTCCATTGGCTATTTTCCCCCGGAATATGGCATGGGAGGTGCGGTCTCAACGTATGGGGACGTGTATAGCTACGGAATCTTGTTACTGGAGATGCTTACTGGTAAGAGGCCAACAGATGATATGTTTGCAGATGGCATGAATTTGCACAATTTTGTTCTGATGGCTTTGCCTGAACGTGTGAAAGAAATATGTGATCCGGTGCTTGTTCAAGAAAAGGAAAGCAGCACTAGAACAAATCCTGCAAGCAGTAGGAATGATGTCCAAAATGATGAAACACGAAGAGTTGAAGAGTGTCTTATTTCCATTGCTAGGATAGGAGTTGCTTGTTCTGTGCATTCGCCCAAAGCACGAATGGAGATTGGAAAAGTTGTAGCTGAATTACGTGTAATCAGGGATGTACTGACTGGAACCAGGATGCTTAGAGAGTAG

Protein Analysis

974

Amino Acids

106.79

Weight (kDa)

6.99

Isoelectric Point (pI)

41.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 73 8.4e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 77 - 157 5.4e-06 Leucine-rich repeat region
LRR_14 PF23598 145 - 344 3.4e-11 Leucine-rich repeat region
LRR_14 PF23598 341 - 478 5e-06 Leucine-rich repeat region
Pkinase PF00069 653 - 872 1.7e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 655 - 873 1.3e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 693, 1283
AarI CACCTGC 1 cut(s) 2260
AatII GACGTC 1 cut(s) 105
Acc36I ACCTGC 1 cut(s) 2260
Acc65I GGTACC 2 cut(s) 707, 1655
AccB1I GGYRCC 6 cut(s) 344, 707, 1655, 1703, 2115, 2257
AciI CCGC 7 cut(s) 649, 1670, 1673, 1715, 1718, 1806, 2534
AclWI GGATC 2 cut(s) 914, 2681
AcoI YGGCCR 1 cut(s) 1803
AcsI RAATTY 8 cut(s) 564, 771, 1183, 1408, 1423, 1963, 2174, 2632
AcuI CTGAAG 2 cut(s) 287, 581
AcyI GRCGYC 1 cut(s) 102
AflII CTTAAG 1 cut(s) 1537
AflIII ACRYGT 4 cut(s) 1679, 2553, 2668, 2875
AhdI GACNNNNNGTC 1 cut(s) 253
AhlI ACTAGT 1 cut(s) 2134
AjiI CACGTC 1 cut(s) 2554
AjnI CCWGG 3 cut(s) 154, 170, 2903
AloI GAACNNNNNNTCC 2 cut(s) 392, 424
Alw21I GWGCWC 1 cut(s) 170
Alw26I GTCTC 3 cut(s) 462, 641, 2542
AlwI GGATC 2 cut(s) 914, 2681
Ama87I CYCGRG 2 cut(s) 395, 1640
AoxI GGCC 4 cut(s) 75, 1231, 1803, 2600
ApaI GGGCCC 1 cut(s) 1235
ApeKI GCWGC 2 cut(s) 379, 2715
ApoI RAATTY 8 cut(s) 564, 771, 1183, 1408, 1423, 1963, 2174, 2632
Asp700I GAANNNNTTC 2 cut(s) 586, 848
Asp718I GGTACC 2 cut(s) 707, 1655
AspLEI GCGC 1 cut(s) 1137
AspS9I GGNCC 4 cut(s) 247, 857, 1231, 1232
AsuC2I CCSGG 2 cut(s) 376, 2513
AsuHPI GGTGA 6 cut(s) 61, 331, 428, 1045, 1532, 1937
AsuNHI GCTAGC 1 cut(s) 2434
AvaI CYCGRG 2 cut(s) 395, 1640
AvaII GGWCC 2 cut(s) 247, 857
BaeGI GKGCMC 2 cut(s) 1235, 2262
BaeI ACNNNNGTAYC 2 cut(s) 1639, 1672
BanI GGYRCC 6 cut(s) 344, 707, 1655, 1703, 2115, 2257
BanII GRGCYC 2 cut(s) 170, 1235
BarI GAAGNNNNNNTAC 4 cut(s) 1581, 1613, 2037, 2069
BbsI GAAGAC 1 cut(s) 1758
Bbv12I GWGCWC 1 cut(s) 170
BbvI GCAGC 2 cut(s) 366, 2727
BciT130I CCWGG 3 cut(s) 156, 172, 2905
BciVI GTATCC 2 cut(s) 284, 1442
BclI TGATCA 2 cut(s) 63, 2011
BcnI CCSGG 2 cut(s) 376, 2513
BcoDI GTCTC 3 cut(s) 462, 641, 2542
BcuI ACTAGT 1 cut(s) 2134
BfaI CTAG 8 cut(s) 2073, 2135, 2216, 2396, 2435, 2465, 2721, 2802
BfmI CTRYAG 1 cut(s) 2358
BfrI CTTAAG 1 cut(s) 1537
BfuAI ACCTGC 1 cut(s) 2260
BfuI GTATCC 2 cut(s) 284, 1442
BglII AGATCT 2 cut(s) 1051, 1351
BisI GCNGC 8 cut(s) 380, 649, 1670, 1673, 1715, 1718, 1806, 2716
BlsI GCNGC 8 cut(s) 381, 650, 1671, 1674, 1716, 1719, 1807, 2717
BmcAI AGTACT 1 cut(s) 2046
Bme1390I CCNGG 5 cut(s) 156, 172, 376, 2513, 2905
Bme18I GGWCC 2 cut(s) 247, 857
BmeRI GACNNNNNGTC 1 cut(s) 253
BmeT110I CYCGRG 2 cut(s) 395, 1640
BmgBI CACGTC 1 cut(s) 2554
BmgT120I GGNCC 4 cut(s) 247, 857, 1231, 1232
BmrFI CCNGG 5 cut(s) 156, 172, 376, 2513, 2905
BmsI GCATC 5 cut(s) 168, 893, 2443, 2574, 2898
BmtI GCTAGC 1 cut(s) 2438
BpiI GAAGAC 1 cut(s) 1758
BpmI CTGGAG 5 cut(s) 193, 212, 236, 437, 2600
Bpu10I CCTNAGC 1 cut(s) 1138
BpuEI CTTGAG 4 cut(s) 319, 339, 1109, 2134
BpuMI CCSGG 2 cut(s) 376, 2513
BsaAI YACGTR 3 cut(s) 198, 1157, 2876
BsaBI GATNNNNATC 3 cut(s) 65, 987, 2211
BsaHI GRCGYC 1 cut(s) 102
BsaI GGTCTC 2 cut(s) 641, 2542
BsaJI CCNNGG 7 cut(s) 72, 394, 652, 1170, 1602, 1689, 2511
BsaWI WCCGGW 1 cut(s) 2689
BsaXI ACNNNNNCTCC 2 cut(s) 2520, 2550
Bse118I RCCGGY 1 cut(s) 341
Bse3DI GCAATG 1 cut(s) 2796
Bse8I GATNNNNATC 3 cut(s) 65, 987, 2211
BseBI CCWGG 3 cut(s) 156, 172, 2905
BseDI CCNNGG 7 cut(s) 72, 394, 652, 1170, 1602, 1689, 2511
BseGI GGATG 9 cut(s) 348, 420, 711, 884, 1009, 2212, 2352, 2893, 2913
BseJI GATNNNNATC 3 cut(s) 65, 987, 2211
BseMI GCAATG 1 cut(s) 2796
BseMII CTCAG 1 cut(s) 322
BseRI GAGGAG 1 cut(s) 1623
BseSI GKGCMC 2 cut(s) 1235, 2262
BseXI GCAGC 2 cut(s) 366, 2727
BseYI CCCAGC 1 cut(s) 1808
BsgI GTGCAG 2 cut(s) 1650, 2288
BshFI GGCC 4 cut(s) 77, 1233, 1805, 2602
BshNI GGYRCC 6 cut(s) 344, 707, 1655, 1703, 2115, 2257
BsiHKAI GWGCWC 1 cut(s) 170
BsiHKCI CYCGRG 2 cut(s) 395, 1640
BsiSI CCGG 4 cut(s) 342, 376, 2513, 2690
BslFI GGGAC 5 cut(s) 358, 413, 920, 1022, 2564
BsmAI GTCTC 3 cut(s) 462, 641, 2542
BsmFI GGGAC 5 cut(s) 358, 413, 920, 1022, 2564
BsmI GAATGC 3 cut(s) 1164, 1550, 2827
BsnI GGCC 4 cut(s) 77, 1233, 1805, 2602
Bso31I GGTCTC 2 cut(s) 641, 2542
BsoBI CYCGRG 2 cut(s) 395, 1640
Bsp120I GGGCCC 1 cut(s) 1231
Bsp1286I GDGCHC 3 cut(s) 170, 1235, 2262
Bsp1407I TGTACA 2 cut(s) 726, 1269
Bsp143I GATC 9 cut(s) 63, 873, 906, 1051, 1351, 1847, 1927, 2011, 2686
Bsp19I CCATGG 1 cut(s) 1602
BspACI CCGC 7 cut(s) 649, 1670, 1673, 1715, 1718, 1806, 2534
BspANI GGCC 4 cut(s) 77, 1233, 1805, 2602
BspCNI CTCAG 1 cut(s) 321
BspHI TCATGA 2 cut(s) 162, 639
BspMI ACCTGC 1 cut(s) 2260
BspOI GCTAGC 1 cut(s) 2438
BspPI GGATC 2 cut(s) 914, 2681
BspT107I GGYRCC 6 cut(s) 344, 707, 1655, 1703, 2115, 2257
BspTI CTTAAG 1 cut(s) 1537
BspTNI GGTCTC 2 cut(s) 641, 2542
BsrDI GCAATG 1 cut(s) 2796
BsrFI RCCGGY 1 cut(s) 341
BsrGI TGTACA 2 cut(s) 726, 1269
BssAI RCCGGY 1 cut(s) 341
BssECI CCNNGG 7 cut(s) 72, 394, 652, 1170, 1602, 1689, 2511
BssMI GATC 9 cut(s) 63, 873, 906, 1051, 1351, 1847, 1927, 2011, 2686
BssNI GRCGYC 1 cut(s) 102
BssT1I CCWWGG 3 cut(s) 72, 652, 1602
Bst2UI CCWGG 3 cut(s) 156, 172, 2905
Bst4CI ACNGT 6 cut(s) 241, 675, 954, 1269, 1917, 2342
Bst6I CTCTTC 7 cut(s) 85, 789, 1030, 1801, 1960, 2767, 2775
BstACI GRCGYC 1 cut(s) 102
BstAFI CTTAAG 1 cut(s) 1537
BstAPI GCANNNNNTGC 1 cut(s) 213
BstAUI TGTACA 2 cut(s) 726, 1269
BstBAI YACGTR 3 cut(s) 198, 1157, 2876
BstC8I GCNNGC 5 cut(s) 123, 263, 2146, 2436, 2737
BstDEI CTNAG 6 cut(s) 308, 482, 533, 1138, 1872, 2912
BstDSI CCRYGG 2 cut(s) 1170, 1602
BstENI CCTNNNNNAGG 1 cut(s) 2399
BstF5I GGATG 9 cut(s) 348, 420, 711, 884, 1009, 2212, 2352, 2893, 2913
BstHHI GCGC 1 cut(s) 1137
BstKTI GATC 9 cut(s) 66, 876, 909, 1054, 1354, 1850, 1930, 2014, 2689
BstMAI GTCTC 3 cut(s) 462, 641, 2542
BstMBI GATC 9 cut(s) 63, 873, 906, 1051, 1351, 1847, 1927, 2011, 2686
BstMWI GCNNNNNNNGC 4 cut(s) 165, 213, 342, 2266
BstNI CCWGG 3 cut(s) 156, 172, 2905
BstNSI RCATGY 1 cut(s) 1683
BstSCI CCNGG 5 cut(s) 154, 170, 374, 2511, 2903
BstSFI CTRYAG 1 cut(s) 2358
BstSLI GKGCMC 2 cut(s) 1235, 2262
BstV1I GCAGC 2 cut(s) 366, 2727
BstV2I GAAGAC 1 cut(s) 1758
BstX2I RGATCY 3 cut(s) 906, 1051, 1351
BstXI CCANNNNNNTGG 2 cut(s) 776, 1445
BstYI RGATCY 3 cut(s) 906, 1051, 1351
BsuI GTATCC 2 cut(s) 284, 1442
BsuRI GGCC 4 cut(s) 77, 1233, 1805, 2602
BtgI CCRYGG 2 cut(s) 1170, 1602
BtrI CACGTC 1 cut(s) 2554
BtsCI GGATG 9 cut(s) 348, 420, 711, 884, 1009, 2212, 2352, 2893, 2913
BtsIMutI CAGTG 1 cut(s) 2253
BveI ACCTGC 1 cut(s) 2260
Cac8I GCNNGC 5 cut(s) 123, 263, 2146, 2436, 2737
CciI TCATGA 2 cut(s) 162, 639
CfoI GCGC 1 cut(s) 1137
Cfr10I RCCGGY 1 cut(s) 341
Cfr13I GGNCC 4 cut(s) 247, 857, 1231, 1232
DdeI CTNAG 6 cut(s) 308, 482, 533, 1138, 1872, 2912
DpnI GATC 9 cut(s) 65, 875, 908, 1053, 1353, 1849, 1929, 2013, 2688
DpnII GATC 9 cut(s) 63, 873, 906, 1051, 1351, 1847, 1927, 2011, 2686
DraI TTTAAA 1 cut(s) 2376
DriI GACNNNNNGTC 1 cut(s) 253
EaeI YGGCCR 1 cut(s) 1803
Eam1104I CTCTTC 7 cut(s) 85, 789, 1030, 1801, 1960, 2767, 2775
Eam1105I GACNNNNNGTC 1 cut(s) 253
EarI CTCTTC 7 cut(s) 85, 789, 1030, 1801, 1960, 2767, 2775
Ecl136II GAGCTC 1 cut(s) 168
Eco130I CCWWGG 3 cut(s) 72, 652, 1602
Eco24I GRGCYC 2 cut(s) 170, 1235
Eco31I GGTCTC 2 cut(s) 641, 2542
Eco47I GGWCC 2 cut(s) 247, 857
Eco53kI GAGCTC 1 cut(s) 168
Eco57I CTGAAG 2 cut(s) 287, 581
Eco88I CYCGRG 2 cut(s) 395, 1640
EcoICRI GAGCTC 1 cut(s) 168
EcoNI CCTNNNNNAGG 1 cut(s) 2399
EcoO109I RGGNCCY 2 cut(s) 1231, 1232
EcoRI GAATTC 1 cut(s) 2174
EcoRII CCWGG 3 cut(s) 154, 170, 2903
EcoT14I CCWWGG 3 cut(s) 72, 652, 1602
EcoT38I GRGCYC 2 cut(s) 170, 1235
ErhI CCWWGG 3 cut(s) 72, 652, 1602
FalI AAGNNNNNCTT 2 cut(s) 2772, 2804
FaqI GGGAC 5 cut(s) 358, 413, 920, 1022, 2564
FauNDI CATATG 1 cut(s) 1921
FbaI TGATCA 2 cut(s) 63, 2011
Fnu4HI GCNGC 8 cut(s) 380, 649, 1670, 1673, 1715, 1718, 1806, 2716
FokI GGATG 8 cut(s) 335, 407, 698, 871, 1016, 2219, 2339, 2900
FriOI GRGCYC 2 cut(s) 170, 1235
Fsp4HI GCNGC 8 cut(s) 380, 649, 1670, 1673, 1715, 1718, 1806, 2716
FspBI CTAG 8 cut(s) 2073, 2135, 2216, 2396, 2435, 2465, 2721, 2802
GlaI GCGC 1 cut(s) 1136
GluI GCNGC 8 cut(s) 380, 649, 1670, 1673, 1715, 1718, 1806, 2716
GsaI CCCAGC 1 cut(s) 1812
GsuI CTGGAG 5 cut(s) 193, 212, 236, 437, 2600
HaeIII GGCC 4 cut(s) 77, 1233, 1805, 2602
HapII CCGG 4 cut(s) 342, 376, 2513, 2690
HhaI GCGC 1 cut(s) 1137
Hin1I GRCGYC 1 cut(s) 102
Hin6I GCGC 1 cut(s) 1135
HinP1I GCGC 1 cut(s) 1135
HincII GTYRAC 1 cut(s) 1878
HindII GTYRAC 1 cut(s) 1878
HindIII AAGCTT 3 cut(s) 667, 1534, 2181
HpaI GTTAAC 1 cut(s) 1878
HpaII CCGG 4 cut(s) 342, 376, 2513, 2690
HphI GGTGA 6 cut(s) 61, 331, 428, 1045, 1532, 1937
Hpy166II GTNNAC 3 cut(s) 857, 1265, 1878
Hpy188I TCNGA 7 cut(s) 136, 293, 413, 1504, 1690, 1962, 2652
Hpy8I GTNNAC 3 cut(s) 857, 1265, 1878
Hpy99I CGWCG 1 cut(s) 107
HpyCH4III ACNGT 6 cut(s) 241, 675, 954, 1269, 1917, 2342
HpyCH4IV ACGT 7 cut(s) 102, 197, 1156, 2543, 2553, 2668, 2875
HpyF10VI GCNNNNNNNGC 4 cut(s) 165, 213, 342, 2266
HpyF3I CTNAG 6 cut(s) 308, 482, 533, 1138, 1872, 2912
HpySE526I ACGT 7 cut(s) 102, 197, 1156, 2543, 2553, 2668, 2875
Hsp92I GRCGYC 1 cut(s) 102
HspAI GCGC 1 cut(s) 1135
KpnI GGTACC 2 cut(s) 711, 1659
Ksp22I TGATCA 2 cut(s) 63, 2011
KspAI GTTAAC 1 cut(s) 1878
Kzo9I GATC 9 cut(s) 63, 873, 906, 1051, 1351, 1847, 1927, 2011, 2686
LmnI GCTCC 2 cut(s) 51, 173
Lsp1109I GCAGC 2 cut(s) 366, 2727
LweI GCATC 5 cut(s) 168, 893, 2443, 2574, 2898
MaeI CTAG 8 cut(s) 2073, 2135, 2216, 2396, 2435, 2465, 2721, 2802
MaeII ACGT 7 cut(s) 102, 197, 1156, 2543, 2553, 2668, 2875
MaeIII GTNAC 5 cut(s) 235, 416, 1433, 2137, 2574
MalI GATC 9 cut(s) 65, 875, 908, 1053, 1353, 1849, 1929, 2013, 2688
MboI GATC 9 cut(s) 63, 873, 906, 1051, 1351, 1847, 1927, 2011, 2686
MfeI CAATTG 1 cut(s) 2028
MflI RGATCY 3 cut(s) 906, 1051, 1351
MhlI GDGCHC 3 cut(s) 170, 1235, 2262
MlyI GAGTC 2 cut(s) 219, 243
MmeI TCCRAC 2 cut(s) 210, 2184
MroXI GAANNNNTTC 2 cut(s) 586, 848
MseI TTAA 9 cut(s) 317, 447, 1340, 1538, 1578, 1877, 1910, 2130, 2375
MslI CAYNNNNRTG 2 cut(s) 20, 755
MspA1I CMGCKG 2 cut(s) 265, 1808
MspCI CTTAAG 1 cut(s) 1537
MspI CCGG 4 cut(s) 342, 376, 2513, 2690
MspR9I CCNGG 5 cut(s) 156, 172, 376, 2513, 2905
MunI CAATTG 1 cut(s) 2028
Mva1269I GAATGC 3 cut(s) 1164, 1550, 2827
MvaI CCWGG 3 cut(s) 156, 172, 2905
MwoI GCNNNNNNNGC 4 cut(s) 165, 213, 342, 2266
NciI CCSGG 2 cut(s) 376, 2513
NcoI CCATGG 1 cut(s) 1602
NdeI CATATG 1 cut(s) 1921
NdeII GATC 9 cut(s) 63, 873, 906, 1051, 1351, 1847, 1927, 2011, 2686
NheI GCTAGC 1 cut(s) 2434
NmeAIII GCCGAG 1 cut(s) 2406
NmuCI GTSAC 3 cut(s) 235, 416, 2137
NspI RCATGY 1 cut(s) 1683
PaeR7I CTCGAG 1 cut(s) 1640
PagI TCATGA 2 cut(s) 162, 639
PaqCI CACCTGC 1 cut(s) 2260
PciI ACATGT 1 cut(s) 1679
PcsI WCGNNNNNNNCGW 2 cut(s) 1751, 1760
PctI GAATGC 3 cut(s) 1164, 1550, 2827
PdmI GAANNNNTTC 2 cut(s) 586, 848
PfeI GAWTC 8 cut(s) 849, 1097, 1147, 1495, 1525, 1813, 2281, 2568
PfoI TCCNGGA 1 cut(s) 170
PkrI GCNGC 8 cut(s) 381, 650, 1671, 1674, 1716, 1719, 1807, 2717
PleI GAGTC 2 cut(s) 219, 242
PpsI GAGTC 2 cut(s) 219, 242
Ppu21I YACGTR 3 cut(s) 198, 1157, 2876
PscI ACATGT 1 cut(s) 1679
PsiI TTATAA 2 cut(s) 693, 1283
Psp124BI GAGCTC 1 cut(s) 170
Psp6I CCWGG 3 cut(s) 154, 170, 2903
PspFI CCCAGC 1 cut(s) 1808
PspGI CCWGG 3 cut(s) 154, 170, 2903
PspOMI GGGCCC 1 cut(s) 1231
PspPI GGNCC 4 cut(s) 247, 857, 1231, 1232
PsrI GAACNNNNNNTAC 2 cut(s) 1972, 2004
PsuI RGATCY 3 cut(s) 906, 1051, 1351
PvuII CAGCTG 1 cut(s) 265
RseI CAYNNNNRTG 2 cut(s) 20, 755
SacI GAGCTC 1 cut(s) 170
SaqAI TTAA 9 cut(s) 317, 447, 1340, 1538, 1578, 1877, 1910, 2130, 2375
SatI GCNGC 8 cut(s) 380, 649, 1670, 1673, 1715, 1718, 1806, 2716
Sau3AI GATC 9 cut(s) 63, 873, 906, 1051, 1351, 1847, 1927, 2011, 2686
Sau96I GGNCC 4 cut(s) 247, 857, 1231, 1232
ScaI AGTACT 1 cut(s) 2046
SchI GAGTC 2 cut(s) 219, 243
ScrFI CCNGG 5 cut(s) 156, 172, 376, 2513, 2905
SduI GDGCHC 3 cut(s) 170, 1235, 2262
SfaNI GCATC 5 cut(s) 168, 893, 2443, 2574, 2898
SfcI CTRYAG 1 cut(s) 2358
Sfr274I CTCGAG 1 cut(s) 1640
SinI GGWCC 2 cut(s) 247, 857
SlaI CTCGAG 1 cut(s) 1640
SmiMI CAYNNNNRTG 2 cut(s) 20, 755
SmlI CTYRAG 6 cut(s) 298, 354, 1124, 1537, 1640, 2149
SmoI CTYRAG 6 cut(s) 298, 354, 1124, 1537, 1640, 2149
SpeI ACTAGT 1 cut(s) 2134
SsiI CCGC 7 cut(s) 649, 1670, 1673, 1715, 1718, 1806, 2534
SspI AATATT 1 cut(s) 2302
SspMI CTAG 8 cut(s) 2073, 2135, 2216, 2396, 2435, 2465, 2721, 2802
SstI GAGCTC 1 cut(s) 170
StyD4I CCNGG 5 cut(s) 154, 170, 374, 2511, 2903
StyI CCWWGG 3 cut(s) 72, 652, 1602
TaaI ACNGT 6 cut(s) 241, 675, 954, 1269, 1917, 2342
TaiI ACGT 7 cut(s) 105, 200, 1159, 2546, 2556, 2671, 2878
TaqI TCGA 7 cut(s) 105, 367, 1212, 1641, 1745, 1754, 1883
TatI WGTACW 5 cut(s) 726, 1040, 1269, 2044, 2890
TauI GCSGC 6 cut(s) 651, 1672, 1675, 1717, 1720, 1808
TfiI GAWTC 8 cut(s) 849, 1097, 1147, 1495, 1525, 1813, 2281, 2568
Tru1I TTAA 9 cut(s) 317, 447, 1340, 1538, 1578, 1877, 1910, 2130, 2375
Tru9I TTAA 9 cut(s) 317, 447, 1340, 1538, 1578, 1877, 1910, 2130, 2375
TscAI CASTG 1 cut(s) 2253
TseFI GTSAC 3 cut(s) 235, 416, 2137
TseI GCWGC 2 cut(s) 379, 2715
Tsp45I GTSAC 3 cut(s) 235, 416, 2137
TspGWI ACGGA 2 cut(s) 530, 2580
TspRI CASTG 1 cut(s) 2253
Vha464I CTTAAG 1 cut(s) 1537
VpaK11BI GGWCC 2 cut(s) 247, 857
XagI CCTNNNNNAGG 1 cut(s) 2399
XapI RAATTY 8 cut(s) 564, 771, 1183, 1408, 1423, 1963, 2174, 2632
XbaI TCTAGA 2 cut(s) 2072, 2215
XceI RCATGY 1 cut(s) 1683
XcmI CCANNNNNNNNNTGG 1 cut(s) 2842
XhoI CTCGAG 1 cut(s) 1640
XmnI GAANNNNTTC 2 cut(s) 586, 848
XspI CTAG 8 cut(s) 2073, 2135, 2216, 2396, 2435, 2465, 2721, 2802
ZraI GACGTC 1 cut(s) 103
ZrmI AGTACT 1 cut(s) 2046
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.