MD07G1090300.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
9457056 .. 9460257
3202 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1090300.v1.1.491

Sequence Viewer

Length: 3060 bp
ATGGGGATGAACAAGTTCTTTTCAGTTTTGCTTTCCTCATATTTTTGCTTTCATGTCCTTATTTTTCACTCATGCCTTGCCTTGAGATTGAGTGGAAACGAGACAGATCGACTGGCCTTGCTTGAAATCAAGGCGAGGATAACCTATGACCCTCTTGAAGCCTTGACTTCATGGAACGAAACCAACCATTTTTGCAATTGGCGTGGTGTCACGTGCGGTCTTCTTCACAAGAGGGTCACGGTGTTGAACCTGCAGTCCTTCAAACTTTCAGGCTCTCTGTCACCACATGTTGGGAACTTGAGTTTTTTGAGAGTACTTTCTCTCACCAACAATAACTTGAGCCACCAAATTCCTCCAGAAATCGGCCGTCTCTCAAGATTGCAAGATATAGTTTGGGAGAATAATTCCCTTACCGGGGAAATTCCCTCAAACTTATCGCGTTGCTCTCAACTCTCCAGAATTGCTTTTGGTGGGAATTTTCTGGTAGGAAGACTTCCTGAGGAGGTTGGCACTTTGTCGAAGTTACGAATAATTTCGATACTCGTCAACAATCTTACAGGAAGTATCCCCTACTCCTTCGCCAATTTATCATCTCTTGAGTTGCTTATGGCACCTGGTAATGATTTTTATGGGAGTATTCCAGATATCTTTGGTCAAATGGCCAATTTTAAAGTTCTTGGTTTGGGTGTTAATAGGTTCTCAGGTGTGATCCCTGCCTCACTCTATAATCTCTCTTCCATTAGTATCATTGATGTTACAGTTAACAGAATCCAAGGCACTTTACCTCCAAACATAGGTATTGTCTTTCCAAGTCTAGAATATTTTGGGGTCGGCCACAACAAATTTACTGGACCTCTTCCTATTTCGTTATCTAATGCCTCAACTCTAACTTCTCTTTGGATGGAAGGAAACAAATTTGAGGGGAAAGTTCCTTCTTTGAAAAGTTTAGTTAATCTTGAGTACTTGAATATTGCTTACAACAATCTTGGAAGGGGGGAAATCGATGACTTGAGCTTTGTTTGCGATCTGACTAATGCCACCCGTTTACAACAACTGATGTTCGATACAAACAATTTTGGGGGCAATTTAACTCAATGCATAGCCAACTTGTCTTCTTCTCTTGTATACTTGCATGTAGAACACAATAAAATCACAGGAAGCATCCCCCATGGGATTGGAAATCTGGCTAACCTAGAGAGCATTTGGTTTGCTCAGAACCAATTTTCAGAAAGCATCCCCACTGACGTGGGAAAGCTTCGGAAGTTATACGAATTAGATTTGGGTTTTAACAATCTCTCCGGCCATATCCCATCGTCATTTGGGAATTTCAGTGAACTATCTATATTGAGTTTAGCTGGTAACAAACTTGACGGCAATATTCCCTCAAGTTTAGGTAAGTGCCAGAAATTGATTACCTTGATTCTTGCTAATAACAACCTCAGTGGTATCTTATCCCCTCAAGTCATTGGCCTGTCATCATCCTATGTGGCATTGGATTTCTCTAAAAATCAGTTGACTGGTTTCCTTCCCAAAGAAGTAGGAAATTTGATAAATCTGGAGTATTTTCGTGTTTCTCAAAACATGCTGTCTGGGGAAATTCCAACAAGTCTTGGTAGTTGCATAAAAATTGAATCTCTAGACCTGCAAGGAAACTTCTTTCAAGGGACGATTCCATCATCTCTGAGTTCACTAAAAGGAATCAAAGAATTAAATCTTTCTCGCAACAACTTGTCAGGCTCGATTCCAGAATTCTTAGAGCGTCTTCAAGTTTTGCAATCTTTGAATCTATCTTATAACAACTTTGAGGGCATGGTACCAATGAAGGGGGTTTTCAAGAATGCAACTGCCACATCGATTGAAGGAAATAGCAAGCTCTGTGGGGGAATTCCTGGATTCCATTTGCCCAAGTGCAAACTCCAACATTCCAACAAGGGAGGATTAAGCCCAAAAATGAAATTGATAATTTCTCTGGTTTGTGGCATTCTTGGGGTTACTTTTGCACTAGTCTTTTTGTACCTCCGTCGGCCACAGAGGGCAAAAATAGAGCGGACTTCAAGTGATTCAGAAAATTTTCTCTCAGTCTCTTACCAAAGTCTTCTCAAAGCTACTGATGGATTTTCCTCTGTCAACTTGATTGGTATGGGCAGTTTTGGGTCTGTCTACAAAGGAGTACTTGAGCAAGGTGAAACAATTGCTGTCAAAGTACTCAACCTTGTTCATCTCGGAGCTTACAAAAGTTTTATTGCTGAGTGCGATGCTTTAAGGAATATTAGACACCGTAATCTTGTCAAGGTACTCTCGGCATGTTCTGGCTTTGATTATCGCGGTCACGATTTCAAAGCCTTAATTTATGAGTTCATGGTTAACGGGAGCTTGGAGGAATGGTTGCATCCAACTCATACAATTGGTGAGACAAGTCAGAGGCCAAGGAGCTTAACAATTTCTCAGAGGTTGAATATTGTTATTGATGTTTCTATGGCACTGGATTATCTCCATCATCATTGTGAGACGCCAATAGTTCATTGCGACCTCAAACCCAGCAATATTCTTCTCGATGAGGACATGGTTGCACATGTAGGTGACTTCGGGTTGGTGAGGTTCCTACCAAAAGCTGCTGAAAATTCTTCGGGAAATCAATCAAGTTCTTTAGGGATCAAGGGAACTATTGGTTATGCTCCTCCTGAATATGGCATGGGACATGAAGTGTGGACACAAGGTGATGTGTACAGCTTTGGTATCCTCCTGTTGGAAATATTTACAGGAAAGCGACCAACCGATAACATGTTTGAGGGAACTTCAAACCTTCATAACTTTGTGAAGGCAGCTCTGCCGGAGAAAGTGGAAGAGGTTTTGGATCCCGTTCTTGTTCAAGAGAGTGATTGTCATGATGAGGATAGCAAAAGGAATCACGTCCAAATCGAAAAAAGTTTAATGTCAGTTTTAGAAATTGGTGTTGCTTGCTCAGCAGAGTTGCCTAGAGAAAGATTGGACATCAATGATGCTATGGCACAAATGTGTCGGATCAGAAACAAACTTCGAGCAAATGGTATGTGTGAATAG

Protein Analysis

1020

Amino Acids

111.99

Weight (kDa)

6.63

Isoelectric Point (pI)

36.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 72 8.3e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 80 - 156 9.8e-06 Leucine-rich repeat region
LRR_14 PF23598 309 - 431 5.1e-07 Leucine-rich repeat region
LRR_8 PF13855 543 - 601 2.1e-08 Leucine rich repeat
Pkinase PF00069 707 - 940 7.6e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 710 - 936 1.2e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1794
Acc36I ACCTGC 2 cut(s) 258, 1650
Acc65I GGTACC 1 cut(s) 1813
AccB1I GGYRCC 2 cut(s) 610, 1813
AccB7I CCANNNNNTGG 1 cut(s) 290
AccBSI CCGCTC 1 cut(s) 2047
AccI GTMKAC 2 cut(s) 1125, 2160
AccII CGCG 2 cut(s) 439, 2325
AciI CCGC 3 cut(s) 216, 2047, 2325
AclWI GGATC 5 cut(s) 703, 2660, 2849, 2862, 3029
AcoI YGGCCR 5 cut(s) 364, 660, 832, 1300, 2024
AcvI CACGTG 1 cut(s) 213
AcyI GRCGYC 1 cut(s) 2510
AdeI CACNNNGTG 1 cut(s) 2717
AfaI GTAC 8 cut(s) 315, 962, 1815, 2015, 2172, 2205, 2295, 2726
AfiI CCNNNNNNNGG 8 cut(s) 290, 362, 414, 415, 794, 1823, 2687, 2746
AflIII ACRYGT 3 cut(s) 286, 2572, 2781
AhlI ACTAGT 1 cut(s) 2002
AjiI CACGTC 2 cut(s) 1246, 2911
AjnI CCWGG 2 cut(s) 613, 1888
AleI CACNNNNGTG 2 cut(s) 1244, 3013
AloI GAACNNNNNNTCC 2 cut(s) 239, 271
Alw26I GTCTC 5 cut(s) 95, 374, 2086, 2405, 2501
AlwI GGATC 5 cut(s) 703, 2660, 2849, 2862, 3029
AoxI GGCC 8 cut(s) 114, 364, 660, 832, 1300, 1468, 2024, 2423
ApeKI GCWGC 2 cut(s) 2612, 2822
ArsI GACNNNNNNTTYG 2 cut(s) 998, 1030
Asp700I GAANNNNTTC 3 cut(s) 14, 532, 2070
Asp718I GGTACC 1 cut(s) 1813
AspS9I GGNCC 1 cut(s) 851
AsuC2I CCSGG 1 cut(s) 415
AsuHPI GGTGA 7 cut(s) 273, 316, 2195, 2420, 2591, 2605, 2729
AvaII GGWCC 1 cut(s) 851
AxyI CCTNAGG 1 cut(s) 498
BalI TGGCCA 1 cut(s) 662
BamHI GGATCC 1 cut(s) 2854
BanI GGYRCC 2 cut(s) 610, 1813
BarI GAAGNNNNNNTAC 2 cut(s) 477, 509
BbrPI CACGTG 1 cut(s) 213
BbsI GAAGAC 5 cut(s) 212, 496, 1104, 1754, 2087
BbvI GCAGC 2 cut(s) 2599, 2834
BccI CCATC 5 cut(s) 895, 1318, 1681, 2105, 2502
BceAI ACGGC 2 cut(s) 351, 1387
BciT130I CCWGG 2 cut(s) 615, 1890
BciVI GTATCC 2 cut(s) 575, 2747
BcnI CCSGG 1 cut(s) 415
BcoDI GTCTC 5 cut(s) 95, 374, 2086, 2405, 2501
BcuI ACTAGT 1 cut(s) 2002
BfaI CTAG 5 cut(s) 815, 1193, 1637, 2003, 2976
BfmI CTRYAG 1 cut(s) 251
BfuAI ACCTGC 2 cut(s) 258, 1650
BfuI GTATCC 2 cut(s) 575, 2747
BisI GCNGC 2 cut(s) 2613, 2823
BlpI GCTNAGC 1 cut(s) 2962
BlsI GCNGC 2 cut(s) 2614, 2824
BmcAI AGTACT 4 cut(s) 315, 962, 2172, 2205
Bme1390I CCNGG 3 cut(s) 415, 615, 1890
Bme18I GGWCC 1 cut(s) 851
BmgBI CACGTC 2 cut(s) 1246, 2911
BmgT120I GGNCC 1 cut(s) 851
BmiI GGNNCC 4 cut(s) 612, 1815, 2600, 2856
BmrFI CCNGG 3 cut(s) 415, 615, 1890
BmsI GCATC 5 cut(s) 1170, 1242, 2245, 2398, 2989
BpiI GAAGAC 5 cut(s) 212, 496, 1104, 1754, 2087
BpmI CTGGAG 3 cut(s) 339, 439, 1577
Bpu1102I GCTNAGC 1 cut(s) 2962
BpuMI CCSGG 1 cut(s) 415
Bsa29I ATCGAT 2 cut(s) 1002, 1853
BsaAI YACGTR 1 cut(s) 213
BsaHI GRCGYC 1 cut(s) 2510
BsaJI CCNNGG 4 cut(s) 414, 772, 1168, 2426
BsaXI ACNNNNNCTCC 6 cut(s) 769, 799, 1280, 1310, 2369, 2399
Bsc4I CCNNNNNNNGG 8 cut(s) 290, 362, 414, 415, 794, 1823, 2687, 2746
Bse1I ACTGG 4 cut(s) 117, 853, 1522, 2487
Bse21I CCTNAGG 1 cut(s) 498
Bse3DI GCAATG 1 cut(s) 2521
BseBI CCWGG 2 cut(s) 615, 1890
BseCI ATCGAT 2 cut(s) 1002, 1853
BseDI CCNNGG 4 cut(s) 414, 772, 1168, 2426
BseGI GGATG 6 cut(s) 12, 906, 1161, 1233, 1478, 2389
BseLI CCNNNNNNNGG 8 cut(s) 290, 362, 414, 415, 794, 1823, 2687, 2746
BseMI GCAATG 1 cut(s) 2521
BseMII CTCAG 9 cut(s) 489, 714, 1226, 1453, 1673, 2091, 2238, 2459, 2976
BseNI ACTGG 4 cut(s) 117, 853, 1522, 2487
BseRI GAGGAG 2 cut(s) 515, 2667
BseX3I CGGCCG 1 cut(s) 364
BseXI GCAGC 2 cut(s) 2599, 2834
BseYI CCCAGC 1 cut(s) 2537
Bsh1236I CGCG 2 cut(s) 439, 2325
Bsh1285I CGRYCG 1 cut(s) 367
BshFI GGCC 8 cut(s) 116, 366, 662, 834, 1302, 1470, 2026, 2425
BshNI GGYRCC 2 cut(s) 610, 1813
BshVI ATCGAT 2 cut(s) 1002, 1853
BsiEI CGRYCG 1 cut(s) 367
BsiSI CCGG 3 cut(s) 414, 1299, 2831
BslFI GGGAC 2 cut(s) 1678, 2709
BslI CCNNNNNNNGG 8 cut(s) 290, 362, 414, 415, 794, 1823, 2687, 2746
BsmAI GTCTC 5 cut(s) 95, 374, 2086, 2405, 2501
BsmBI CGTCTC 2 cut(s) 374, 2501
BsmFI GGGAC 2 cut(s) 1678, 2709
BsmI GAATGC 2 cut(s) 1843, 1980
BsnI GGCC 8 cut(s) 116, 366, 662, 834, 1302, 1470, 2026, 2425
Bsp1407I TGTACA 1 cut(s) 2724
Bsp143I GATC 6 cut(s) 106, 708, 1024, 2652, 2854, 3021
Bsp1720I GCTNAGC 1 cut(s) 2962
Bsp19I CCATGG 1 cut(s) 1168
BspACI CCGC 3 cut(s) 216, 2047, 2325
BspANI GGCC 8 cut(s) 116, 366, 662, 834, 1302, 1470, 2026, 2425
BspCNI CTCAG 9 cut(s) 490, 713, 1225, 1452, 1674, 2090, 2239, 2458, 2975
BspDI ATCGAT 2 cut(s) 1002, 1853
BspFNI CGCG 2 cut(s) 439, 2325
BspHI TCATGA 1 cut(s) 2884
BspLI GGNNCC 4 cut(s) 612, 1815, 2600, 2856
BspMAI CTGCAG 1 cut(s) 255
BspMI ACCTGC 2 cut(s) 258, 1650
BspPI GGATC 5 cut(s) 703, 2660, 2849, 2862, 3029
BspT107I GGYRCC 2 cut(s) 610, 1813
BsrBI CCGCTC 1 cut(s) 2047
BsrDI GCAATG 1 cut(s) 2521
BsrGI TGTACA 1 cut(s) 2724
BsrI ACTGG 4 cut(s) 117, 853, 1522, 2487
BssECI CCNNGG 4 cut(s) 414, 772, 1168, 2426
BssMI GATC 6 cut(s) 106, 708, 1024, 2652, 2854, 3021
BssNAI GTATAC 1 cut(s) 1126
BssNI GRCGYC 1 cut(s) 2510
BssT1I CCWWGG 3 cut(s) 772, 1168, 2426
Bst1107I GTATAC 1 cut(s) 1126
Bst2UI CCWGG 2 cut(s) 615, 1890
Bst4CI ACNGT 3 cut(s) 241, 760, 2279
Bst6I CTCTTC 3 cut(s) 739, 861, 2838
BstACI GRCGYC 1 cut(s) 2510
BstAUI TGTACA 1 cut(s) 2724
BstBAI YACGTR 1 cut(s) 213
BstC8I GCNNGC 2 cut(s) 1871, 2959
BstDSI CCRYGG 1 cut(s) 1168
BstF5I GGATG 6 cut(s) 12, 906, 1161, 1233, 1478, 2389
BstFNI CGCG 2 cut(s) 439, 2325
BstKTI GATC 6 cut(s) 109, 711, 1027, 2655, 2857, 3024
BstMAI GTCTC 5 cut(s) 95, 374, 2086, 2405, 2501
BstMBI GATC 6 cut(s) 106, 708, 1024, 2652, 2854, 3021
BstMCI CGRYCG 1 cut(s) 367
BstMWI GCNNNNNNNGC 2 cut(s) 1020, 2963
BstNI CCWGG 2 cut(s) 615, 1890
BstNSI RCATGY 6 cut(s) 290, 1136, 1585, 2307, 2576, 2785
BstSCI CCNGG 3 cut(s) 413, 613, 1888
BstSFI CTRYAG 1 cut(s) 251
BstUI CGCG 2 cut(s) 439, 2325
BstV1I GCAGC 2 cut(s) 2599, 2834
BstV2I GAAGAC 5 cut(s) 212, 496, 1104, 1754, 2087
BstX2I RGATCY 1 cut(s) 2854
BstXI CCANNNNNNTGG 2 cut(s) 1175, 1246
BstYI RGATCY 1 cut(s) 2854
BstZ17I GTATAC 1 cut(s) 1126
BstZI CGGCCG 1 cut(s) 364
Bsu15I ATCGAT 2 cut(s) 1002, 1853
Bsu36I CCTNAGG 1 cut(s) 498
BsuI GTATCC 2 cut(s) 575, 2747
BsuRI GGCC 8 cut(s) 116, 366, 662, 834, 1302, 1470, 2026, 2425
BsuTUI ATCGAT 2 cut(s) 1002, 1853
BtgI CCRYGG 1 cut(s) 1168
BtgZI GCGATG 1 cut(s) 2268
BtrI CACGTC 2 cut(s) 1246, 2911
BtsCI GGATG 6 cut(s) 12, 906, 1161, 1233, 1478, 2389
BtsIMutI CAGTG 4 cut(s) 1239, 1336, 1447, 2480
BveI ACCTGC 2 cut(s) 258, 1650
Cac8I GCNNGC 2 cut(s) 1871, 2959
CciI TCATGA 1 cut(s) 2884
Cfr13I GGNCC 1 cut(s) 851
ClaI ATCGAT 2 cut(s) 1002, 1853
CseI GACGC 2 cut(s) 1748, 2518
CsiI ACCWGGT 1 cut(s) 613
Csp6I GTAC 8 cut(s) 314, 961, 1814, 2014, 2171, 2204, 2294, 2725
CspCI CAANNNNNGTGG 8 cut(s) 184, 219, 1423, 1458, 1837, 1858, 1872, 1893
CviQI GTAC 8 cut(s) 314, 961, 1814, 2014, 2171, 2204, 2294, 2725
DpnI GATC 6 cut(s) 108, 710, 1026, 2654, 2856, 3023
DpnII GATC 6 cut(s) 106, 708, 1024, 2652, 2854, 3021
DraI TTTAAA 1 cut(s) 670
DraIII CACNNNGTG 1 cut(s) 2717
EaeI YGGCCR 5 cut(s) 364, 660, 832, 1300, 2024
EagI CGGCCG 1 cut(s) 364
Eam1104I CTCTTC 3 cut(s) 739, 861, 2838
EarI CTCTTC 3 cut(s) 739, 861, 2838
EclXI CGGCCG 1 cut(s) 364
Eco130I CCWWGG 3 cut(s) 772, 1168, 2426
Eco32I GATATC 1 cut(s) 646
Eco47I GGWCC 1 cut(s) 851
Eco52I CGGCCG 1 cut(s) 364
Eco72I CACGTG 1 cut(s) 213
Eco81I CCTNAGG 1 cut(s) 498
EcoRI GAATTC 2 cut(s) 1748, 1884
EcoRII CCWGG 2 cut(s) 613, 1888
EcoRV GATATC 1 cut(s) 646
EcoT14I CCWWGG 3 cut(s) 772, 1168, 2426
EcoT22I ATGCAT 1 cut(s) 1100
ErhI CCWWGG 3 cut(s) 772, 1168, 2426
Esp3I CGTCTC 2 cut(s) 374, 2501
FalI AAGNNNNNCTT 2 cut(s) 2157, 2189
FaqI GGGAC 2 cut(s) 1678, 2709
FblI GTMKAC 2 cut(s) 1125, 2160
Fnu4HI GCNGC 2 cut(s) 2613, 2823
FokI GGATG 6 cut(s) 19, 913, 1148, 1220, 1465, 2376
Fsp4HI GCNGC 2 cut(s) 2613, 2823
FspBI CTAG 5 cut(s) 815, 1193, 1637, 2003, 2976
GluI GCNGC 2 cut(s) 2613, 2823
GsaI CCCAGC 1 cut(s) 2541
GsuI CTGGAG 3 cut(s) 339, 439, 1577
HaeIII GGCC 8 cut(s) 116, 366, 662, 834, 1302, 1470, 2026, 2425
HapII CCGG 3 cut(s) 414, 1299, 2831
HgaI GACGC 2 cut(s) 1748, 2518
Hin1I GRCGYC 1 cut(s) 2510
HincII GTYRAC 5 cut(s) 547, 763, 1515, 2128, 2365
HindII GTYRAC 5 cut(s) 547, 763, 1515, 2128, 2365
HindIII AAGCTT 1 cut(s) 1253
HpaI GTTAAC 2 cut(s) 763, 2365
HpaII CCGG 3 cut(s) 414, 1299, 2831
HphI GGTGA 7 cut(s) 273, 316, 2195, 2420, 2591, 2605, 2729
Hpy99I CGWCG 1 cut(s) 2025
HpyCH4III ACNGT 3 cut(s) 241, 760, 2279
HpyCH4IV ACGT 3 cut(s) 212, 1245, 2910
HpyF10VI GCNNNNNNNGC 2 cut(s) 1020, 2963
HpySE526I ACGT 3 cut(s) 212, 1245, 2910
Hsp92I GRCGYC 1 cut(s) 2510
KpnI GGTACC 1 cut(s) 1817
KspAI GTTAAC 2 cut(s) 763, 2365
Kzo9I GATC 6 cut(s) 106, 708, 1024, 2652, 2854, 3021
LmnI GCTCC 4 cut(s) 2225, 2370, 2430, 2680
Lsp1109I GCAGC 2 cut(s) 2599, 2834
LweI GCATC 5 cut(s) 1170, 1242, 2245, 2398, 2989
MabI ACCWGGT 1 cut(s) 613
MaeI CTAG 5 cut(s) 815, 1193, 1637, 2003, 2976
MaeII ACGT 3 cut(s) 212, 1245, 2910
MaeIII GTNAC 9 cut(s) 208, 235, 279, 522, 754, 1358, 1990, 2327, 2579
MalI GATC 6 cut(s) 108, 710, 1026, 2654, 2856, 3023
MbiI CCGCTC 1 cut(s) 2047
MboI GATC 6 cut(s) 106, 708, 1024, 2652, 2854, 3021
MfeI CAATTG 3 cut(s) 196, 2190, 2403
MflI RGATCY 1 cut(s) 2854
MlsI TGGCCA 1 cut(s) 662
MluNI TGGCCA 1 cut(s) 662
MmeI TCCRAC 6 cut(s) 1625, 1942, 1950, 2417, 2727, 2999
Mox20I TGGCCA 1 cut(s) 662
Mph1103I ATGCAT 1 cut(s) 1100
MroXI GAANNNNTTC 3 cut(s) 14, 532, 2070
MscI TGGCCA 1 cut(s) 662
MslI CAYNNNNRTG 4 cut(s) 1244, 2502, 2577, 3013
Msp20I TGGCCA 1 cut(s) 662
MspI CCGG 3 cut(s) 414, 1299, 2831
MspR9I CCNGG 3 cut(s) 415, 615, 1890
MunI CAATTG 3 cut(s) 196, 2190, 2403
Mva1269I GAATGC 2 cut(s) 1843, 1980
MvaI CCWGG 2 cut(s) 615, 1890
MvnI CGCG 2 cut(s) 439, 2325
MwoI GCNNNNNNNGC 2 cut(s) 1020, 2963
NciI CCSGG 1 cut(s) 415
NcoI CCATGG 1 cut(s) 1168
NdeII GATC 6 cut(s) 106, 708, 1024, 2652, 2854, 3021
NlaIV GGNNCC 4 cut(s) 612, 1815, 2600, 2856
NmeAIII GCCGAG 1 cut(s) 2279
NmuCI GTSAC 5 cut(s) 208, 235, 279, 2327, 2579
NsiI ATGCAT 1 cut(s) 1100
NspI RCATGY 6 cut(s) 290, 1136, 1585, 2307, 2576, 2785
OliI CACNNNNGTG 2 cut(s) 1244, 3013
PagI TCATGA 1 cut(s) 2884
PciI ACATGT 3 cut(s) 286, 2572, 2781
PcsI WCGNNNNNNNCGW 1 cut(s) 2916
PctI GAATGC 2 cut(s) 1843, 1980
PdmI GAANNNNTTC 3 cut(s) 14, 532, 2070
PflMI CCANNNNNTGG 1 cut(s) 290
PfoI TCCNGGA 1 cut(s) 1888
PkrI GCNGC 2 cut(s) 2614, 2824
PmaCI CACGTG 1 cut(s) 213
PmlI CACGTG 1 cut(s) 213
Ppu21I YACGTR 1 cut(s) 213
PscI ACATGT 3 cut(s) 286, 2572, 2781
PsiI TTATAA 1 cut(s) 1794
Psp6I CCWGG 2 cut(s) 613, 1888
PspCI CACGTG 1 cut(s) 213
PspFI CCCAGC 1 cut(s) 2537
PspGI CCWGG 2 cut(s) 613, 1888
PspN4I GGNNCC 4 cut(s) 612, 1815, 2600, 2856
PspPI GGNCC 1 cut(s) 851
PstI CTGCAG 1 cut(s) 255
PsuI RGATCY 1 cut(s) 2854
RsaI GTAC 8 cut(s) 315, 962, 1815, 2015, 2172, 2205, 2295, 2726
RsaNI GTAC 8 cut(s) 314, 961, 1814, 2014, 2171, 2204, 2294, 2725
RseI CAYNNNNRTG 4 cut(s) 1244, 2502, 2577, 3013
SatI GCNGC 2 cut(s) 2613, 2823
Sau3AI GATC 6 cut(s) 106, 708, 1024, 2652, 2854, 3021
Sau96I GGNCC 1 cut(s) 851
ScaI AGTACT 4 cut(s) 315, 962, 2172, 2205
ScrFI CCNGG 3 cut(s) 415, 615, 1890
SexAI ACCWGGT 1 cut(s) 613
SfaNI GCATC 5 cut(s) 1170, 1242, 2245, 2398, 2989
SfcI CTRYAG 1 cut(s) 251
SinI GGWCC 1 cut(s) 851
SmiMI CAYNNNNRTG 4 cut(s) 1244, 2502, 2577, 3013
SpeI ACTAGT 1 cut(s) 2002
SsiI CCGC 3 cut(s) 216, 2047, 2325
SspI AATATT 7 cut(s) 821, 970, 1378, 2269, 2458, 2545, 2754
SspMI CTAG 5 cut(s) 815, 1193, 1637, 2003, 2976
StyD4I CCNGG 3 cut(s) 413, 613, 1888
StyI CCWWGG 3 cut(s) 772, 1168, 2426
TaaI ACNGT 3 cut(s) 241, 760, 2279
TaiI ACGT 3 cut(s) 215, 1248, 2913
TatI WGTACW 5 cut(s) 313, 960, 2170, 2203, 2724
TscAI CASTG 4 cut(s) 1246, 1336, 1447, 2487
TseFI GTSAC 5 cut(s) 208, 235, 279, 2327, 2579
TseI GCWGC 2 cut(s) 2612, 2822
Tsp45I GTSAC 5 cut(s) 208, 235, 279, 2327, 2579
TspGWI ACGGA 1 cut(s) 2009
TspRI CASTG 4 cut(s) 1246, 1336, 1447, 2487
Van91I CCANNNNNTGG 1 cut(s) 290
VpaK11BI GGWCC 1 cut(s) 851
XbaI TCTAGA 2 cut(s) 814, 1636
XceI RCATGY 6 cut(s) 290, 1136, 1585, 2307, 2576, 2785
XmiI GTMKAC 2 cut(s) 1125, 2160
XmnI GAANNNNTTC 3 cut(s) 14, 532, 2070
XspI CTAG 5 cut(s) 815, 1193, 1637, 2003, 2976
ZrmI AGTACT 4 cut(s) 315, 962, 2172, 2205
Zsp2I ATGCAT 1 cut(s) 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.