Rmu_sc0001001.1_g000017
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001001.1
Physical Location & Seq
Reverse (-)
108188 .. 110592
2405 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001001.1_g000017.1.cds

Sequence Viewer

Length: 2286 bp
atgaacagattcagcggaccaattccatttgcaatcacaaacgcatcccacctttcacagtttttgatctctaataataattttaccggaaaagttcctagtctggcaagagtttccaatctgtttcggttggaaatgggtgataataatcttataaatgaggatggtgacttggattttctctcttctctggttaattgtaccagtttagaacgtgtaaatattagtgggaataattttcaaggagtgctacctgaatctatcagcaatttctcaacaaagctcaaggtaataagtttaggaaggaatcagctacgtggaagcattcccattgcgataggaaatctcatcaacttgtttgtattgagcttcgaggaaaacctattgacaggccctatacccagttcaatatgcaagccaagtaaattgtacgatctgtgtataaaccataatcagttatcaggtactatcccatcttgtttggtaaatctaacttggttaagcatattagatctcaagtcaaacaacttacaaggaggcataccaaaaagtcttggtgaatgcaataatttgctagctttggttctttctcaaaataaacttaacggttccattccacaagaagtcatcggttcatcatctttatcactagttttggatttggatttggatttatccaataaccaatttactggttacattcccaatgaagtgggtcttttgtcgagacttgtttctttgaatctttctgaaaatagattatctggtgagattccagaaagcttatggggatgcacaaatttgataagtttgcacctgaacggaaacaagttgcatgggagaattcctgcatctttgagttctttgaggcagattcaagattttgacctctctcgtaacaacttgtctggaacaattcccgattatttgcagaatttcaccttgctcaatttgaacctatcctttaataattttgaaggtgaagtaccaaatgaaggagtgtttaggaatacaagtgtggtttctctcatgggaaacagaggagtactctgtggaggtgtacctcagttgaacttgcctaaatgtaggcctaacctaagtgacttgtctaagaaaaaatcgtcttttctgctgatattagtcatcttagttttttctttgtccagtttgatgttgtgctgtctgctcctttatagatcaaagaaaaggaaagcaaaggttgagtcaactttgatacaaatgttggatatttcacccttaaaactgtcctatggtgatctcctaaaagcaactgatggcttctcttctcagaatttgattggctctggtagttctggttctgtgtattggggagttcttgatcaacaggaggaaagaattgttgctgtgaaagtactcaatcttcaaagttcgagagcttctagaagttttgtagctgaatgtgaagtcctgaaaagcattaggcaccgaaatcttgttaaactagtgactacttgctcaagtattgattttcaaggaaatgaattcaaagctttggtttttgagttcatgttggatgaaaatctagatgaaatgttgcattattcagctcattcattggttggggtgcccaatgtgctggtgcatttgaatcttatccaaagggtaaatattgccattgatgtagctaatgccttggattatttgcacagtcgctttcacatccctatagttcattgtgatttaaagccgagtaatgttcttttagaaaaggacatgactgcccgtgtctgtgattttgggttagcaacctacctcccagatgcttcttcactagagagttcttccaatataataagggggtccattggctattttcccccagagtatggcatgggaggtgcggtctcaacgtatggggacgtgtatagctacggaatcttggtactggagatgcttactggtaagaggccaacagatgatatgtttacagatgacatgaacttgcacaattttgttctgatggctttgcctgaacgtgtgaaagaaatatgtgatccggtgcttgttcaagaaaaggaaagcagcactagtacaaatcctgcaagcaataggaatgatgtccaaaatgatgaaacacgtagagttgaagagtgtcttatttccattgctaggataggagttgcttgttctgtgcatttgcccaaagcacgaatggagattggaaaagttgtagctgaattacgtgtaatcaggaatgtactgactggaaccaggatgcttagagttagagtagagagcacatga

Protein Analysis

761

Amino Acids

83.75

Weight (kDa)

6.27

Isoelectric Point (pI)

36.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 155
AccB1I GGYRCC 2 cut(s) 1464, 1606
AccB7I CCANNNNNTGG 1 cut(s) 1868
AciI CCGC 2 cut(s) 15, 1883
AclWI GGATC 1 cut(s) 2030
AcsI RAATTY 5 cut(s) 799, 843, 934, 1312, 1523
AfiI CCNNNNNNNGG 3 cut(s) 995, 1868, 2151
AflIII ACRYGT 5 cut(s) 214, 1902, 2017, 2117, 2224
AhlI ACTAGT 3 cut(s) 649, 1483, 2069
AjiI CACGTC 1 cut(s) 1903
AjnI CCWGG 1 cut(s) 2252
Alw21I GWGCWC 1 cut(s) 2282
Alw26I GTCTC 2 cut(s) 721, 1891
AlwI GGATC 1 cut(s) 2030
AoxI GGCC 3 cut(s) 391, 1088, 1949
ApeKI GCWGC 1 cut(s) 2064
ApoI RAATTY 5 cut(s) 799, 843, 934, 1312, 1523
ArsI GACNNNNNNTTYG 2 cut(s) 1208, 1240
Asp700I GAANNNNTTC 1 cut(s) 8
AspS9I GGNCC 3 cut(s) 17, 392, 1842
AsuHPI GGTGA 8 cut(s) 152, 179, 569, 779, 931, 992, 1245, 1286
AsuNHI GCTAGC 1 cut(s) 574
AvaII GGWCC 2 cut(s) 17, 1842
BaeGI GKGCMC 1 cut(s) 1611
BaeI ACNNNNGTAYC 2 cut(s) 1226, 1259
BanI GGYRCC 2 cut(s) 1464, 1606
BarI GAAGNNNNNNTAC 4 cut(s) 969, 1001, 1386, 1418
Bbv12I GWGCWC 1 cut(s) 2282
BbvI GCAGC 1 cut(s) 2076
BccI CCATC 4 cut(s) 158, 481, 1289, 1996
BciT130I CCWGG 1 cut(s) 2254
BclI TGATCA 1 cut(s) 1360
BcoDI GTCTC 2 cut(s) 721, 1891
BcuI ACTAGT 3 cut(s) 649, 1483, 2069
BfaI CTAG 9 cut(s) 99, 575, 650, 1422, 1484, 1565, 1814, 2070, 2151
BfmI CTRYAG 1 cut(s) 1707
BglII AGATCT 1 cut(s) 511
BisI GCNGC 1 cut(s) 2065
BlsI GCNGC 1 cut(s) 2066
BmcAI AGTACT 2 cut(s) 1047, 1395
Bme1390I CCNGG 1 cut(s) 2254
Bme18I GGWCC 2 cut(s) 17, 1842
BmgBI CACGTC 1 cut(s) 1903
BmgT120I GGNCC 3 cut(s) 17, 392, 1842
BmiI GGNNCC 5 cut(s) 610, 1466, 1608, 1843, 2251
BmrFI CCNGG 1 cut(s) 2254
BmrI ACTGGG 1 cut(s) 396
BmsI GCATC 6 cut(s) 53, 782, 860, 1792, 1923, 2247
BmtI GCTAGC 1 cut(s) 578
BmuI ACTGGG 1 cut(s) 396
BplI GAGNNNNNCTC 2 cut(s) 1032, 1064
BpmI CTGGAG 1 cut(s) 1949
BpuEI CTTGAG 3 cut(s) 269, 500, 1483
BsaAI YACGTR 3 cut(s) 317, 2120, 2225
BsaBI GATNNNNATC 2 cut(s) 147, 1560
BsaI GGTCTC 1 cut(s) 1891
BsaJI CCNNGG 1 cut(s) 1674
BsaWI WCCGGW 2 cut(s) 86, 2038
BsaXI ACNNNNNCTCC 2 cut(s) 1869, 1899
Bsc4I CCNNNNNNNGG 3 cut(s) 995, 1868, 2151
Bse1I ACTGG 7 cut(s) 204, 402, 697, 1164, 1932, 1945, 2251
Bse3DI GCAATG 2 cut(s) 330, 2145
Bse8I GATNNNNATC 2 cut(s) 147, 1560
BseBI CCWGG 1 cut(s) 2254
BseDI CCNNGG 1 cut(s) 1674
BseGI GGATG 6 cut(s) 44, 169, 797, 1561, 1701, 2262
BseJI GATNNNNATC 2 cut(s) 147, 1560
BseLI CCNNNNNNNGG 3 cut(s) 995, 1868, 2151
BseMI GCAATG 2 cut(s) 330, 2145
BseMII CTCAG 2 cut(s) 1079, 1322
BseNI ACTGG 7 cut(s) 204, 402, 697, 1164, 1932, 1945, 2251
BseRI GAGGAG 1 cut(s) 1056
BseSI GKGCMC 1 cut(s) 1611
BseXI GCAGC 1 cut(s) 2076
BshFI GGCC 3 cut(s) 393, 1090, 1951
BshNI GGYRCC 2 cut(s) 1464, 1606
BsiHKAI GWGCWC 1 cut(s) 2282
BsiSI CCGG 2 cut(s) 87, 2039
BslFI GGGAC 1 cut(s) 1913
BslI CCNNNNNNNGG 3 cut(s) 995, 1868, 2151
BsmAI GTCTC 2 cut(s) 721, 1891
BsmFI GGGAC 1 cut(s) 1913
BsmI GAATGC 2 cut(s) 324, 566
BsnI GGCC 3 cut(s) 393, 1090, 1951
Bso31I GGTCTC 1 cut(s) 1891
Bsp1286I GDGCHC 2 cut(s) 1611, 2282
Bsp143I GATC 7 cut(s) 66, 433, 511, 1196, 1276, 1360, 2035
BspACI CCGC 2 cut(s) 15, 1883
BspANI GGCC 3 cut(s) 393, 1090, 1951
BspCNI CTCAG 2 cut(s) 1078, 1321
BspLI GGNNCC 5 cut(s) 610, 1466, 1608, 1843, 2251
BspOI GCTAGC 1 cut(s) 578
BspPI GGATC 1 cut(s) 2030
BspT107I GGYRCC 2 cut(s) 1464, 1606
BspTNI GGTCTC 1 cut(s) 1891
BsrDI GCAATG 2 cut(s) 330, 2145
BsrI ACTGG 7 cut(s) 204, 402, 697, 1164, 1932, 1945, 2251
BssECI CCNNGG 1 cut(s) 1674
BssMI GATC 7 cut(s) 66, 433, 511, 1196, 1276, 1360, 2035
BssT1I CCWWGG 1 cut(s) 1674
Bst2UI CCWGG 1 cut(s) 2254
Bst4CI ACNGT 4 cut(s) 60, 608, 1266, 1691
Bst6I CTCTTC 3 cut(s) 190, 1309, 2124
BstBAI YACGTR 3 cut(s) 317, 2120, 2225
BstC8I GCNNGC 3 cut(s) 416, 576, 2086
BstDEI CTNAG 6 cut(s) 1065, 1097, 1110, 1147, 1308, 2261
BstF5I GGATG 6 cut(s) 44, 169, 797, 1561, 1701, 2262
BstKTI GATC 7 cut(s) 69, 436, 514, 1199, 1279, 1363, 2038
BstMAI GTCTC 2 cut(s) 721, 1891
BstMBI GATC 7 cut(s) 66, 433, 511, 1196, 1276, 1360, 2035
BstMWI GCNNNNNNNGC 1 cut(s) 1615
BstNI CCWGG 1 cut(s) 2254
BstSCI CCNGG 1 cut(s) 2252
BstSFI CTRYAG 1 cut(s) 1707
BstSLI GKGCMC 1 cut(s) 1611
BstV1I GCAGC 1 cut(s) 2076
BstX2I RGATCY 1 cut(s) 511
BstXI CCANNNNNNTGG 3 cut(s) 692, 712, 1618
BstYI RGATCY 1 cut(s) 511
BsuRI GGCC 3 cut(s) 393, 1090, 1951
BtrI CACGTC 1 cut(s) 1903
BtsCI GGATG 6 cut(s) 44, 169, 797, 1561, 1701, 2262
Cac8I GCNNGC 3 cut(s) 416, 576, 2086
Cfr13I GGNCC 3 cut(s) 17, 392, 1842
CviAII CATG 7 cut(s) 836, 1030, 1549, 1756, 1873, 1978, 2283
DdeI CTNAG 6 cut(s) 1065, 1097, 1110, 1147, 1308, 2261
DpnI GATC 7 cut(s) 68, 435, 513, 1198, 1278, 1362, 2037
DpnII GATC 7 cut(s) 66, 433, 511, 1196, 1276, 1360, 2035
DraI TTTAAA 1 cut(s) 1725
Eam1104I CTCTTC 3 cut(s) 190, 1309, 2124
EarI CTCTTC 3 cut(s) 190, 1309, 2124
Eco130I CCWWGG 1 cut(s) 1674
Eco147I AGGCCT 1 cut(s) 1090
Eco31I GGTCTC 1 cut(s) 1891
Eco47I GGWCC 2 cut(s) 17, 1842
EcoO109I RGGNCCY 1 cut(s) 392
EcoRI GAATTC 2 cut(s) 843, 1523
EcoRII CCWGG 1 cut(s) 2252
EcoT14I CCWWGG 1 cut(s) 1674
ErhI CCWWGG 1 cut(s) 1674
FaeI CATG 7 cut(s) 839, 1033, 1552, 1759, 1876, 1981, 2286
FalI AAGNNNNNCTT 4 cut(s) 702, 734, 2121, 2153
FaqI GGGAC 1 cut(s) 1913
FatI CATG 7 cut(s) 835, 1029, 1548, 1755, 1872, 1977, 2282
FbaI TGATCA 1 cut(s) 1360
Fnu4HI GCNGC 1 cut(s) 2065
FokI GGATG 6 cut(s) 31, 176, 804, 1568, 1688, 2269
Fsp4HI GCNGC 1 cut(s) 2065
FspBI CTAG 9 cut(s) 99, 575, 650, 1422, 1484, 1565, 1814, 2070, 2151
GluI GCNGC 1 cut(s) 2065
GsuI CTGGAG 1 cut(s) 1949
HaeIII GGCC 3 cut(s) 393, 1090, 1951
HapII CCGG 2 cut(s) 87, 2039
Hin1II CATG 7 cut(s) 839, 1033, 1552, 1759, 1876, 1981, 2286
HincII GTYRAC 1 cut(s) 1227
HindII GTYRAC 1 cut(s) 1227
HindIII AAGCTT 2 cut(s) 781, 1530
HinfI GANTC 9 cut(s) 9, 257, 307, 742, 772, 874, 1223, 1630, 1917
HpaII CCGG 2 cut(s) 87, 2039
HphI GGTGA 8 cut(s) 152, 179, 569, 779, 931, 992, 1245, 1286
Hpy166II GTNNAC 3 cut(s) 1061, 1227, 1968
Hpy188I TCNGA 3 cut(s) 751, 1311, 2001
Hpy8I GTNNAC 3 cut(s) 1061, 1227, 1968
HpyAV CCTTC 3 cut(s) 297, 971, 989
HpyCH4III ACNGT 4 cut(s) 60, 608, 1266, 1691
HpyCH4IV ACGT 7 cut(s) 214, 316, 1892, 1902, 2017, 2119, 2224
HpyF10VI GCNNNNNNNGC 1 cut(s) 1615
HpyF3I CTNAG 6 cut(s) 1065, 1097, 1110, 1147, 1308, 2261
HpySE526I ACGT 7 cut(s) 214, 316, 1892, 1902, 2017, 2119, 2224
Hsp92II CATG 7 cut(s) 839, 1033, 1552, 1759, 1876, 1981, 2286
Ksp22I TGATCA 1 cut(s) 1360
Kzo9I GATC 7 cut(s) 66, 433, 511, 1196, 1276, 1360, 2035
LmnI GCTCC 1 cut(s) 1191
Lsp1109I GCAGC 1 cut(s) 2076
LweI GCATC 6 cut(s) 53, 782, 860, 1792, 1923, 2247
MaeI CTAG 9 cut(s) 99, 575, 650, 1422, 1484, 1565, 1814, 2070, 2151
MaeII ACGT 7 cut(s) 214, 316, 1892, 1902, 2017, 2119, 2224
MaeIII GTNAC 5 cut(s) 167, 695, 896, 1100, 1486
MalI GATC 7 cut(s) 68, 435, 513, 1198, 1278, 1362, 2037
MboI GATC 7 cut(s) 66, 433, 511, 1196, 1276, 1360, 2035
MboII GAAGA 6 cut(s) 177, 1296, 1394, 1800, 1815, 2141
MflI RGATCY 1 cut(s) 511
MhlI GDGCHC 2 cut(s) 1611, 2282
MlyI GAGTC 1 cut(s) 1232
MmeI TCCRAC 3 cut(s) 111, 1224, 1533
MroXI GAANNNNTTC 1 cut(s) 8
MseI TTAA 7 cut(s) 195, 500, 603, 966, 1259, 1479, 1724
MspA1I CMGCKG 1 cut(s) 15
MspI CCGG 2 cut(s) 87, 2039
MspR9I CCNGG 1 cut(s) 2254
Mva1269I GAATGC 2 cut(s) 324, 566
MvaI CCWGG 1 cut(s) 2254
MwoI GCNNNNNNNGC 1 cut(s) 1615
NdeII GATC 7 cut(s) 66, 433, 511, 1196, 1276, 1360, 2035
NheI GCTAGC 1 cut(s) 574
NlaIII CATG 7 cut(s) 839, 1033, 1552, 1759, 1876, 1981, 2286
NlaIV GGNNCC 5 cut(s) 610, 1466, 1608, 1843, 2251
NmeAIII GCCGAG 1 cut(s) 1755
NmuCI GTSAC 3 cut(s) 167, 1100, 1486
PceI AGGCCT 1 cut(s) 1090
PctI GAATGC 2 cut(s) 324, 566
PdmI GAANNNNTTC 1 cut(s) 8
PfeI GAWTC 8 cut(s) 9, 257, 307, 742, 772, 874, 1630, 1917
PflMI CCANNNNNTGG 1 cut(s) 1868
PkrI GCNGC 1 cut(s) 2066
PleI GAGTC 1 cut(s) 1231
PpsI GAGTC 1 cut(s) 1231
Ppu21I YACGTR 3 cut(s) 317, 2120, 2225
PsiI TTATAA 1 cut(s) 155
Psp6I CCWGG 1 cut(s) 2252
PspGI CCWGG 1 cut(s) 2252
PspN4I GGNNCC 5 cut(s) 610, 1466, 1608, 1843, 2251
PspPI GGNCC 3 cut(s) 17, 392, 1842
PsrI GAACNNNNNNTAC 2 cut(s) 1321, 1353
PsuI RGATCY 1 cut(s) 511
SaqAI TTAA 7 cut(s) 195, 500, 603, 966, 1259, 1479, 1724
SatI GCNGC 1 cut(s) 2065
Sau3AI GATC 7 cut(s) 66, 433, 511, 1196, 1276, 1360, 2035
Sau96I GGNCC 3 cut(s) 17, 392, 1842
ScaI AGTACT 2 cut(s) 1047, 1395
SchI GAGTC 1 cut(s) 1232
ScrFI CCNGG 1 cut(s) 2254
SduI GDGCHC 2 cut(s) 1611, 2282
SfaNI GCATC 6 cut(s) 53, 782, 860, 1792, 1923, 2247
SfcI CTRYAG 1 cut(s) 1707
SinI GGWCC 2 cut(s) 17, 1842
SmlI CTYRAG 3 cut(s) 284, 515, 1498
SmoI CTYRAG 3 cut(s) 284, 515, 1498
SpeI ACTAGT 3 cut(s) 649, 1483, 2069
SseBI AGGCCT 1 cut(s) 1090
SsiI CCGC 2 cut(s) 15, 1883
SspI AATATT 2 cut(s) 223, 1651
SspMI CTAG 9 cut(s) 99, 575, 650, 1422, 1484, 1565, 1814, 2070, 2151
StuI AGGCCT 1 cut(s) 1090
StyD4I CCNGG 1 cut(s) 2252
StyI CCWWGG 1 cut(s) 1674
TaaI ACNGT 4 cut(s) 60, 608, 1266, 1691
TaiI ACGT 7 cut(s) 217, 319, 1895, 1905, 2020, 2122, 2227
TaqI TCGA 3 cut(s) 372, 725, 1412
TatI WGTACW 4 cut(s) 1045, 1393, 2072, 2239
TfiI GAWTC 8 cut(s) 9, 257, 307, 742, 772, 874, 1630, 1917
Tru1I TTAA 7 cut(s) 195, 500, 603, 966, 1259, 1479, 1724
Tru9I TTAA 7 cut(s) 195, 500, 603, 966, 1259, 1479, 1724
TseFI GTSAC 3 cut(s) 167, 1100, 1486
TseI GCWGC 1 cut(s) 2064
Tsp45I GTSAC 3 cut(s) 167, 1100, 1486
TspGWI ACGGA 2 cut(s) 837, 1929
Van91I CCANNNNNTGG 1 cut(s) 1868
VpaK11BI GGWCC 2 cut(s) 17, 1842
XapI RAATTY 5 cut(s) 799, 843, 934, 1312, 1523
XbaI TCTAGA 2 cut(s) 1421, 1564
XcmI CCANNNNNNNNNTGG 2 cut(s) 783, 2191
XmnI GAANNNNTTC 1 cut(s) 8
XspI CTAG 9 cut(s) 99, 575, 650, 1422, 1484, 1565, 1814, 2070, 2151
ZrmI AGTACT 2 cut(s) 1047, 1395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.