Rw1G009590
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
21084635 .. 21087950
3316 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G009590.1

Sequence Viewer

Length: 3081 bp
ATGGGAGTTTTGGTTTTGAAACTACTTTTCATATACTCAATTTTTTATGCAATGTTCATTTTTTGTTGTATCTCCTCCATGCAACTGAACCATCCCTTAGCCATGAGACTCGAAGGGAGTGAGAGGGATAGGCTGGCACTACTAGCGATCAAAGCTCAAATACAACACGATCCCAACCAGGTCACAAGCTCATGGAATGAAACCCTTCACTTTTGCCTGTGGCACGGTGTCACCTGCAGTCGACGACATCGCCAAAGGGTGACAAAGCTTCAGCTGGGCTCTCTAGCGTTGGTGGGATCCATATCTCAGCACATAGGAAACCTAAGCTTCTTAAGAGTGCTAAATCTGGAGAACAATAGCTTCAATCATCAAATCCCTCCTCAAATTGGGCATTTGCACAGATTGAAGGTACTGTATCTAAAAAATAACTCACTTAATGGTACTATTCCTCCCAACATATCCAATTGCTTCCAACTCATCTCTCTTGATCTTGCTGGAAACCTTCTGGTGGGTAAAATTCCTCCCCAACTTAGTTCCTTGTCAAAGCTTGGATTTTTTAATTTGCAAGTGAACAATTTATCAGGAGAGATCCCTCCTTTGGGGAACCTTTCGTCTCTCGAGATATTTGGTTCAACTTTTAATTCCTTAGAAGGAAGCATCCCTAATTCTCTATGCCAGTTGAAAAAATTAACAATTCTCTATTTAGGTGAAAATAGTTTGTCTGGTATCATCCCTTCCTGCATTTATAACCTCTCTAGTATAGTTGAATTCGAGGTATCAGGAAACCAAATTGAAGGAAGTATTCCCTCAAACTTGGGCAATGCTTTTCCCAACCTTCAAATCTTTTCCATTTACCAGAATCAATTTACTGGGGCCATCCCTTTGTCAATATCCAATGCAACAAATCTTGTGTGGTTTCAAGGTTCTTCAAACAAACTTACTGGAAAGGTGCCAAATTTACGAAATCTTCATAACCTTATGACATTTGGTGTCAGTGACAATAATCTTGGAAGCAGTAAGCATGGTGACTTGAGTTTTGTCTCAGAATTGATCAACGCCACACGGCTAACTGGGTTGAGCTTGGGCTACAATAATTTCGGAGGGATGTTGCCCACATCAATATCCAATCTCTCAACCAATCTACGAATCCTAGGAATTGGAGAAAACAAACTGCATGGAAGCATCCCAAGTGGATTAGTGAATCTTATCAACTTGGAAGTGCTCTCTCTGGAGGAAAACTTCTTCACAGATAGCATCCCCAATGACATTGGGAAGGTTTCAGGGCTTGAGAAATTGTATCTTAACAACAACCAACTATCAGGGAGAATTCCATCCTCTCTAGGAAACTTGACATTGTTAGCAATGCTCCAATTGCAAGAAAATAATCTAGAGGGTAGCATCCCTTCCAGCCTAGGGAAATACCAGTGGTTACTAGAATTGGGTCTTTCTGGAAACAAGCTGAATGGCACGATACCTCCTCAGGTTATTGGCCTCTCATCTTTATCAACAATTTTGGCATTGCATAGAAACCAATTCACTGGTTCCCTTCCGATGGAGATTGGCAAATTGAAGAATTTAGGTGGACTAGACGTTTCTGACAACTTGTTATCAGGAGAACTTCCCAGTAGCCTTGGCAGTTGCAAGAGTTTAGAAGCCTTATACTTGCAAGGCAACTTCTTCTTGGGACCCATTCCTTCATCTATGAAGGACTTGAGAGGGATTCGATATTTAGACCTTTCTCGAAACAATTTGTCAGGAGATATTCCACAGTTCTTCGAACGCTTTGGAAACTTGGAGAATCTGAACCTATCCTTCAATCAATTTTGGGGAGCAGTACCAACTGAGGGTATTTTCAAGAATGCAAGTGCTATTTCAGTTGCTGGAAACACAAGACTTTGCGGCGGTATTCCTAATCTTCAACTTCCTGTGTGCGAGTCTAAAGGAGAAGGATTGTCTCGTAGAATGAAACTAGTGATCTCTTTAGTTTCTGGGATCACTCTGTTGGGACTGGCTGTGGTGCTCACTCTTTTCGTTCTTCTTCGTAAGAAAAGGAAAGAAACTGAATTAAACACTTCTGGGAACTCTGTTTTGCAAGTTTCATATGCTACTCTTCTTAAAGCTACTGACGGGTTCTCTTCAGCTAATTTGATTGGTGTGGGTGCTTTTGGGTCTGTGTACAAAGGAATTCTTGGTGATGATAGAGTTGCTGTCGCTGTGAAGGTGCTTAACATGTTACACCAGGGAGCGTCTAAGAGTTTCATGGCTGAATGTGCGGCGTTGAGAAATATCAGGCATCGAAATCTGGTCAAGATCTTAACTGCATGTTCAAGTATTGATTTCAGCGGCAATGATTTCAAGGCCCTTGTTTACGAGTTCATGGACAATGGTAGCTTAGAGGAGTGGTTGCATCCATCTACTGGAACTGAAGAGGTAATAGAAGCACCCAAAAGTTTGAATCTTGTTCAAAGGGTCAACATCGCCATTGATGTTTCTAGTGCATTGGATTATCTTCACAACAATTGCGGAACACCGATCGTTCATTGTGATCTCAAGCCAAGTAATGTTCTTTTGGACAGTGACCTTACTGGACATGTTTCTGACTTTGGGCTGTCAAGGTTTCTCCTAAAACCAACCACGAGTGTTTCTGGAAATCAATCAAGCTCTATTGGAATTAGAGGATCGGTTGGTTATGCTGCGCCAGAGTATGCCATGGGAAGTGAAGTGTCAAAATATGGGGATGTCTATAGCTTTGGCATTCTCTTGTTAGAAATGTTTACAGGGAAGAGACCCACAGATCATATGTTCAGTGACGGCTTGAATCTTCATAATTTTGTGAAGACATCTCTCTCAGAACGTGTTTCAGAGATTTTAGAATCACTAGTTCTCCAAGAAGGCACCACCAATGTGGCTGAAGCTCACAGGCACAGCCAATTGAGTGTGAGAGCACAAAAAACTGAAGAGTTCTTGACTTCAGTACTTGGTTTAGGTATTTCATGTTCTGTTGAATCCCCCACAAACAGAAAGGATATTAGTGATGTTGCTTCTGAATTGCATTCCATTAGGGGTAACCTTCTTGGCTAG

Protein Analysis

1026

Amino Acids

111.31

Weight (kDa)

7.1

Isoelectric Point (pI)

29.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 80 4.4e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 98 - 236 7.5e-13 Leucine-rich repeat region
LRR_14 PF23598 370 - 480 1.4e-06 Leucine-rich repeat region
LRR_14 PF23598 513 - 602 4.7e-07 Leucine-rich repeat region
LRR_8 PF13855 566 - 608 7.1e-06 Leucine rich repeat
Pkinase PF00069 713 - 946 1.5e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 715 - 934 1.7e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 747
AarI CACCTGC 1 cut(s) 242
Acc36I ACCTGC 1 cut(s) 242
AccB1I GGYRCC 2 cut(s) 949, 2894
AccB7I CCANNNNNTGG 1 cut(s) 2417
AccI GTMKAC 1 cut(s) 241
AciI CCGC 5 cut(s) 1899, 1902, 2273, 2343, 2523
AclWI GGATC 6 cut(s) 164, 291, 304, 583, 2000, 2686
AcsI RAATTY 6 cut(s) 516, 767, 955, 1326, 1573, 2184
AcuI CTGAAG 6 cut(s) 254, 2121, 2445, 2931, 2955, 2976
AfaI GTAC 5 cut(s) 411, 442, 1836, 2177, 2976
AfiI CCNNNNNNNGG 8 cut(s) 386, 508, 598, 599, 1413, 1552, 1844, 2417
AflII CTTAAG 1 cut(s) 331
AflIII ACRYGT 3 cut(s) 2229, 2590, 2854
AhlI ACTAGT 2 cut(s) 1969, 2878
AjnI CCWGG 2 cut(s) 177, 2238
AleI CACNNNNGTG 1 cut(s) 2903
Alw21I GWGCWC 3 cut(s) 1224, 2022, 2947
Alw26I GTCTC 5 cut(s) 100, 618, 1045, 1959, 2779
AlwI GGATC 6 cut(s) 164, 291, 304, 583, 2000, 2686
AlwNI CAGNNNCTG 1 cut(s) 1880
Ama87I CYCGRG 1 cut(s) 617
AoxI GGCC 3 cut(s) 873, 1489, 2358
ApeKI GCWGC 1 cut(s) 2693
ApoI RAATTY 6 cut(s) 516, 767, 955, 1326, 1573, 2184
ArsI GACNNNNNNTTYG 2 cut(s) 1019, 1051
Asp700I GAANNNNTTC 1 cut(s) 204
AspA2I CCTAGG 2 cut(s) 1150, 1411
AspLEI GCGC 1 cut(s) 2698
AspS9I GGNCC 3 cut(s) 873, 1685, 2359
AsuHPI GGTGA 5 cut(s) 223, 271, 719, 1037, 2204
AsuII TTCGAA 1 cut(s) 1776
AvaI CYCGRG 1 cut(s) 617
AvaII GGWCC 1 cut(s) 1685
AvrII CCTAGG 2 cut(s) 1150, 1411
AxyI CCTNAGG 1 cut(s) 1479
BamHI GGATCC 1 cut(s) 296
BanI GGYRCC 2 cut(s) 949, 2894
BanII GRGCYC 1 cut(s) 281
BarI GAAGNNNNNNTAC 4 cut(s) 718, 750, 1387, 1419
BauI CACGAG 1 cut(s) 2635
BbsI GAAGAC 1 cut(s) 2843
Bbv12I GWGCWC 3 cut(s) 1224, 2022, 2947
BbvI GCAGC 1 cut(s) 2680
BccI CCATC 5 cut(s) 99, 884, 1339, 1546, 2419
BceAI ACGGC 2 cut(s) 1079, 2827
BciT130I CCWGG 2 cut(s) 179, 2240
BclI TGATCA 1 cut(s) 1050
BcoDI GTCTC 5 cut(s) 100, 618, 1045, 1959, 2779
BcuI ACTAGT 2 cut(s) 1969, 2878
BfmI CTRYAG 2 cut(s) 235, 2743
BfrI CTTAAG 1 cut(s) 331
BfuAI ACCTGC 1 cut(s) 242
BglII AGATCT 1 cut(s) 2310
BisI GCNGC 4 cut(s) 1900, 2274, 2344, 2694
BlnI CCTAGG 2 cut(s) 1150, 1411
BlsI GCNGC 4 cut(s) 1901, 2275, 2345, 2695
BmcAI AGTACT 1 cut(s) 2976
Bme1390I CCNGG 2 cut(s) 179, 2240
Bme18I GGWCC 1 cut(s) 1685
BmeT110I CYCGRG 1 cut(s) 617
BmgT120I GGNCC 3 cut(s) 873, 1685, 2359
BmiI GGNNCC 8 cut(s) 298, 605, 874, 951, 1543, 1686, 1687, 2896
BmrFI CCNGG 2 cut(s) 179, 2240
BmrI ACTGGG 3 cut(s) 879, 1080, 1617
BmsI GCATC 6 cut(s) 666, 1191, 1263, 1407, 2302, 2416
BmuI ACTGGG 3 cut(s) 879, 1080, 1617
BpiI GAAGAC 1 cut(s) 2843
BpmI CTGGAG 2 cut(s) 368, 1250
Bpu10I CCTNAGC 2 cut(s) 97, 323
Bpu14I TTCGAA 1 cut(s) 1776
BpuEI CTTGAG 4 cut(s) 1051, 1307, 1732, 2534
BsaBI GATNNNNATC 1 cut(s) 301
BsaI GGTCTC 1 cut(s) 2779
BsaJI CCNNGG 5 cut(s) 1150, 1411, 1630, 2239, 2709
BsaXI ACNNNNNCTCC 7 cut(s) 27, 433, 463, 1459, 1489, 2868, 2898
Bsc4I CCNNNNNNNGG 8 cut(s) 386, 508, 598, 599, 1413, 1552, 1844, 2417
Bse21I CCTNAGG 1 cut(s) 1479
Bse3DI GCAATG 5 cut(s) 57, 826, 1368, 1517, 2353
Bse8I GATNNNNATC 1 cut(s) 301
BseBI CCWGG 2 cut(s) 179, 2240
BseDI CCNNGG 5 cut(s) 1150, 1411, 1630, 2239, 2709
BseJI GATNNNNATC 1 cut(s) 301
BseLI CCNNNNNNNGG 8 cut(s) 386, 508, 598, 599, 1413, 1552, 1844, 2417
BseMI GCAATG 5 cut(s) 57, 826, 1368, 1517, 2353
BseMII CTCAG 5 cut(s) 320, 1056, 1493, 1833, 2862
BseRI GAGGAG 4 cut(s) 64, 369, 1467, 2411
BseXI GCAGC 1 cut(s) 2680
BseYI CCCAGC 1 cut(s) 274
Bsh1285I CGRYCG 1 cut(s) 2535
BshFI GGCC 3 cut(s) 875, 1491, 2360
BshNI GGYRCC 2 cut(s) 949, 2894
BsiEI CGRYCG 1 cut(s) 2535
BsiHKAI GWGCWC 3 cut(s) 1224, 2022, 2947
BsiHKCI CYCGRG 1 cut(s) 617
BslFI GGGAC 2 cut(s) 1698, 2019
BslI CCNNNNNNNGG 8 cut(s) 386, 508, 598, 599, 1413, 1552, 1844, 2417
BsmAI GTCTC 5 cut(s) 100, 618, 1045, 1959, 2779
BsmBI CGTCTC 1 cut(s) 618
BsmFI GGGAC 2 cut(s) 1698, 2019
BsmI GAATGC 3 cut(s) 1864, 2754, 3052
BsnI GGCC 3 cut(s) 875, 1491, 2360
Bso31I GGTCTC 1 cut(s) 2779
BsoBI CYCGRG 1 cut(s) 617
Bsp119I TTCGAA 1 cut(s) 1776
Bsp1286I GDGCHC 4 cut(s) 281, 1224, 2022, 2947
Bsp1407I TGTACA 1 cut(s) 2175
Bsp19I CCATGG 1 cut(s) 2709
BspACI CCGC 5 cut(s) 1899, 1902, 2273, 2343, 2523
BspANI GGCC 3 cut(s) 875, 1491, 2360
BspCNI CTCAG 5 cut(s) 319, 1055, 1492, 1834, 2861
BspLI GGNNCC 8 cut(s) 298, 605, 874, 951, 1543, 1686, 1687, 2896
BspMAI CTGCAG 1 cut(s) 239
BspMI ACCTGC 1 cut(s) 242
BspPI GGATC 6 cut(s) 164, 291, 304, 583, 2000, 2686
BspT104I TTCGAA 1 cut(s) 1776
BspT107I GGYRCC 2 cut(s) 949, 2894
BspTI CTTAAG 1 cut(s) 331
BspTNI GGTCTC 1 cut(s) 2779
BsrDI GCAATG 5 cut(s) 57, 826, 1368, 1517, 2353
BsrGI TGTACA 1 cut(s) 2175
BssECI CCNNGG 5 cut(s) 1150, 1411, 1630, 2239, 2709
BssSI CACGAG 1 cut(s) 2635
BssT1I CCWWGG 4 cut(s) 1150, 1411, 1630, 2709
Bst2BI CACGAG 1 cut(s) 2635
Bst2UI CCWGG 2 cut(s) 179, 2240
Bst4CI ACNGT 4 cut(s) 227, 414, 1770, 2576
Bst6I CTCTTC 5 cut(s) 2115, 2140, 2421, 2777, 2952
BstAFI CTTAAG 1 cut(s) 331
BstAUI TGTACA 1 cut(s) 2175
BstBI TTCGAA 1 cut(s) 1776
BstC8I GCNNGC 1 cut(s) 135
BstDSI CCRYGG 1 cut(s) 2709
BstEII GGTNACC 1 cut(s) 3065
BstHHI GCGC 1 cut(s) 2698
BstMAI GTCTC 5 cut(s) 100, 618, 1045, 1959, 2779
BstMCI CGRYCG 1 cut(s) 2535
BstMWI GCNNNNNNNGC 4 cut(s) 143, 152, 1372, 2270
BstNI CCWGG 2 cut(s) 179, 2240
BstNSI RCATGY 3 cut(s) 2233, 2325, 2594
BstPI GGTNACC 1 cut(s) 3065
BstSCI CCNGG 2 cut(s) 177, 2238
BstSFI CTRYAG 2 cut(s) 235, 2743
BstV1I GCAGC 1 cut(s) 2680
BstV2I GAAGAC 1 cut(s) 2843
BstX2I RGATCY 3 cut(s) 296, 588, 2310
BstXI CCANNNNNNTGG 2 cut(s) 1538, 2905
BstYI RGATCY 3 cut(s) 296, 588, 2310
Bsu36I CCTNAGG 1 cut(s) 1479
BsuRI GGCC 3 cut(s) 875, 1491, 2360
BtgI CCRYGG 1 cut(s) 2709
BtgZI GCGATG 2 cut(s) 233, 2461
BtsIMutI CAGTG 5 cut(s) 1000, 1430, 1536, 2581, 2812
BveI ACCTGC 1 cut(s) 242
Cac8I GCNNGC 1 cut(s) 135
CaiI CAGNNNCTG 1 cut(s) 1880
CfoI GCGC 1 cut(s) 2698
Cfr13I GGNCC 3 cut(s) 873, 1685, 2359
CseI GACGC 1 cut(s) 2235
CsiI ACCWGGT 1 cut(s) 177
Csp6I GTAC 5 cut(s) 410, 441, 1835, 2176, 2975
CviQI GTAC 5 cut(s) 410, 441, 1835, 2176, 2975
Eam1104I CTCTTC 5 cut(s) 2115, 2140, 2421, 2777, 2952
EarI CTCTTC 5 cut(s) 2115, 2140, 2421, 2777, 2952
Eco130I CCWWGG 4 cut(s) 1150, 1411, 1630, 2709
Eco24I GRGCYC 1 cut(s) 281
Eco31I GGTCTC 1 cut(s) 2779
Eco47I GGWCC 1 cut(s) 1685
Eco57I CTGAAG 6 cut(s) 254, 2121, 2445, 2931, 2955, 2976
Eco81I CCTNAGG 1 cut(s) 1479
Eco88I CYCGRG 1 cut(s) 617
Eco91I GGTNACC 1 cut(s) 3065
EcoO109I RGGNCCY 2 cut(s) 1685, 2359
EcoO65I GGTNACC 1 cut(s) 3065
EcoRI GAATTC 3 cut(s) 767, 1326, 2184
EcoRII CCWGG 2 cut(s) 177, 2238
EcoT14I CCWWGG 4 cut(s) 1150, 1411, 1630, 2709
EcoT38I GRGCYC 1 cut(s) 281
ErhI CCWWGG 4 cut(s) 1150, 1411, 1630, 2709
Esp3I CGTCTC 1 cut(s) 618
FalI AAGNNNNNCTT 2 cut(s) 2172, 2204
FaqI GGGAC 2 cut(s) 1698, 2019
FauNDI CATATG 2 cut(s) 2101, 2799
FbaI TGATCA 1 cut(s) 1050
FblI GTMKAC 1 cut(s) 241
Fnu4HI GCNGC 4 cut(s) 1900, 2274, 2344, 2694
FriOI GRGCYC 1 cut(s) 281
Fsp4HI GCNGC 4 cut(s) 1900, 2274, 2344, 2694
GlaI GCGC 1 cut(s) 2697
GluI GCNGC 4 cut(s) 1900, 2274, 2344, 2694
GsaI CCCAGC 1 cut(s) 278
GsuI CTGGAG 2 cut(s) 368, 1250
HaeIII GGCC 3 cut(s) 875, 1491, 2360
HgaI GACGC 1 cut(s) 2235
HhaI GCGC 1 cut(s) 2698
Hin6I GCGC 1 cut(s) 2696
HinP1I GCGC 1 cut(s) 2696
HincII GTYRAC 2 cut(s) 242, 2473
HindII GTYRAC 2 cut(s) 242, 2473
HindIII AAGCTT 3 cut(s) 266, 325, 545
HphI GGTGA 5 cut(s) 223, 271, 719, 1037, 2204
Hpy166II GTNNAC 7 cut(s) 242, 571, 1583, 2176, 2368, 2473, 2775
Hpy188I TCNGA 9 cut(s) 1045, 1100, 1551, 1597, 1803, 2599, 2851, 2863, 3046
Hpy8I GTNNAC 7 cut(s) 242, 571, 1583, 2176, 2368, 2473, 2775
Hpy99I CGWCG 1 cut(s) 246
HpyCH4III ACNGT 4 cut(s) 227, 414, 1770, 2576
HpyCH4IV ACGT 2 cut(s) 1590, 2854
HpyF10VI GCNNNNNNNGC 4 cut(s) 143, 152, 1372, 2270
HpySE526I ACGT 2 cut(s) 1590, 2854
HspAI GCGC 1 cut(s) 2696
KflI GGGWCCC 1 cut(s) 1685
Ksp22I TGATCA 1 cut(s) 1050
LmnI GCTCC 3 cut(s) 1371, 1829, 2243
Lsp1109I GCAGC 1 cut(s) 2680
LweI GCATC 6 cut(s) 666, 1191, 1263, 1407, 2302, 2416
MabI ACCWGGT 1 cut(s) 177
MaeII ACGT 2 cut(s) 1590, 2854
MfeI CAATTG 4 cut(s) 463, 1370, 2518, 2930
MflI RGATCY 3 cut(s) 296, 588, 2310
MhlI GDGCHC 4 cut(s) 281, 1224, 2022, 2947
MlyI GAGTC 2 cut(s) 102, 1943
MmeI TCCRAC 1 cut(s) 496
MroXI GAANNNNTTC 1 cut(s) 204
MslI CAYNNNNRTG 1 cut(s) 2903
MspA1I CMGCKG 2 cut(s) 274, 2343
MspCI CTTAAG 1 cut(s) 331
MspR9I CCNGG 2 cut(s) 179, 2240
MunI CAATTG 4 cut(s) 463, 1370, 2518, 2930
Mva1269I GAATGC 3 cut(s) 1864, 2754, 3052
MvaI CCWGG 2 cut(s) 179, 2240
MwoI GCNNNNNNNGC 4 cut(s) 143, 152, 1372, 2270
NcoI CCATGG 1 cut(s) 2709
NdeI CATATG 2 cut(s) 2101, 2799
NlaIV GGNNCC 8 cut(s) 298, 605, 874, 951, 1543, 1686, 1687, 2896
NmuCI GTSAC 7 cut(s) 181, 229, 259, 995, 1025, 2576, 2807
NspI RCATGY 3 cut(s) 2233, 2325, 2594
NspV TTCGAA 1 cut(s) 1776
OliI CACNNNNGTG 1 cut(s) 2903
PaeR7I CTCGAG 1 cut(s) 617
PaqCI CACCTGC 1 cut(s) 242
PciI ACATGT 2 cut(s) 2229, 2590
PctI GAATGC 3 cut(s) 1864, 2754, 3052
PdmI GAANNNNTTC 1 cut(s) 204
PfeI GAWTC 9 cut(s) 859, 1146, 1201, 1720, 1798, 2455, 2818, 2873, 3005
PflMI CCANNNNNTGG 1 cut(s) 2417
PkrI GCNGC 4 cut(s) 1901, 2275, 2345, 2695
Ple19I CGATCG 1 cut(s) 2535
PleI GAGTC 2 cut(s) 102, 1942
PpsI GAGTC 2 cut(s) 102, 1942
PpuMI RGGWCCY 1 cut(s) 1685
PscI ACATGT 2 cut(s) 2229, 2590
PsiI TTATAA 1 cut(s) 747
Psp5II RGGWCCY 1 cut(s) 1685
Psp6I CCWGG 2 cut(s) 177, 2238
PspEI GGTNACC 1 cut(s) 3065
PspFI CCCAGC 1 cut(s) 274
PspGI CCWGG 2 cut(s) 177, 2238
PspN4I GGNNCC 8 cut(s) 298, 605, 874, 951, 1543, 1686, 1687, 2896
PspPI GGNCC 3 cut(s) 873, 1685, 2359
PspPPI RGGWCCY 1 cut(s) 1685
PsrI GAACNNNNNNTAC 2 cut(s) 2980, 3012
PstI CTGCAG 1 cut(s) 239
PstNI CAGNNNCTG 1 cut(s) 1880
PsuI RGATCY 3 cut(s) 296, 588, 2310
PvuI CGATCG 1 cut(s) 2535
PvuII CAGCTG 1 cut(s) 274
RsaI GTAC 5 cut(s) 411, 442, 1836, 2177, 2976
RsaNI GTAC 5 cut(s) 410, 441, 1835, 2176, 2975
RseI CAYNNNNRTG 1 cut(s) 2903
SalI GTCGAC 1 cut(s) 240
SatI GCNGC 4 cut(s) 1900, 2274, 2344, 2694
Sau96I GGNCC 3 cut(s) 873, 1685, 2359
ScaI AGTACT 1 cut(s) 2976
SchI GAGTC 2 cut(s) 102, 1943
ScrFI CCNGG 2 cut(s) 179, 2240
SduI GDGCHC 4 cut(s) 281, 1224, 2022, 2947
SexAI ACCWGGT 1 cut(s) 177
SfaNI GCATC 6 cut(s) 666, 1191, 1263, 1407, 2302, 2416
SfcI CTRYAG 2 cut(s) 235, 2743
Sfr274I CTCGAG 1 cut(s) 617
SfuI TTCGAA 1 cut(s) 1776
SinI GGWCC 1 cut(s) 1685
SlaI CTCGAG 1 cut(s) 617
SmiMI CAYNNNNRTG 1 cut(s) 2903
SmlI CTYRAG 6 cut(s) 331, 617, 1030, 1286, 1711, 2549
SmoI CTYRAG 6 cut(s) 331, 617, 1030, 1286, 1711, 2549
SpeI ACTAGT 2 cut(s) 1969, 2878
SsiI CCGC 5 cut(s) 1899, 1902, 2273, 2343, 2523
StyD4I CCNGG 2 cut(s) 177, 2238
StyI CCWWGG 4 cut(s) 1150, 1411, 1630, 2709
TaaI ACNGT 4 cut(s) 227, 414, 1770, 2576
TaiI ACGT 2 cut(s) 1593, 2857
TaqI TCGA 8 cut(s) 111, 241, 618, 771, 1723, 1741, 1776, 2296
TatI WGTACW 2 cut(s) 2175, 2974
TauI GCSGC 3 cut(s) 1902, 2276, 2346
TfiI GAWTC 9 cut(s) 859, 1146, 1201, 1720, 1798, 2455, 2818, 2873, 3005
TscAI CASTG 5 cut(s) 1000, 1430, 1543, 2581, 2812
TseFI GTSAC 7 cut(s) 181, 229, 259, 995, 1025, 2576, 2807
TseI GCWGC 1 cut(s) 2693
Tsp45I GTSAC 7 cut(s) 181, 229, 259, 995, 1025, 2576, 2807
TspRI CASTG 5 cut(s) 1000, 1430, 1543, 2581, 2812
Van91I CCANNNNNTGG 1 cut(s) 2417
Vha464I CTTAAG 1 cut(s) 331
VpaK11BI GGWCC 1 cut(s) 1685
XapI RAATTY 6 cut(s) 516, 767, 955, 1326, 1573, 2184
XbaI TCTAGA 1 cut(s) 1387
XceI RCATGY 3 cut(s) 2233, 2325, 2594
XhoI CTCGAG 1 cut(s) 617
XmaJI CCTAGG 2 cut(s) 1150, 1411
XmiI GTMKAC 1 cut(s) 241
XmnI GAANNNNTTC 1 cut(s) 204
ZrmI AGTACT 1 cut(s) 2976
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.