RchiOBHm_Chr1g0355681

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
48290218 .. 48292575
2358 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58114

Sequence Viewer

Length: 1854 bp
ATGTCAAGAAACTCCTTCACAGGTAGCATCCCCACAGACATTGGGCAGCTTTCAGGGCTTGAGCGATTGTTTCTTAACAACAACCAATTATCAGGGAGCATTCCATCTTCTTTTGGAAATTTAACATTGTTAACACTTCTCCAATTGCAAGAAAATAATCTACAGAGTAGCATCCCGTCCAGCCTAGGGAAATGCCACTGGTTAAACGAATTAGTTCTTTCAGGAAACAATCTGAATGGCAAGATACCGCCCCAAGTTATTGGCCTCTCATCTTTATCAACAGTTTTGGCATTGAACAGAAACCAATTCACTGGTTCCCTTCCGATGGAGATTGGGAAACTGAAGAATTTAGGTCAACTGGACGTTTCTGACAATTTGTTATCAGGAGAACTTCCCAGTAGCCTCAGCAATTGCGAGAGCTTAGAAGTACTACACTTGCAAGGCAACTTCTTCTTGGGACCCATTCCTTCATCTATGAATGAATTGAGAGGGATTCGAGATTTAGACCTTTCTCGCAACAATTTGTTGGGAGAGATTCCACAATTTCTTGAGGATCTGAACTTGGAGTACCTGAACCTCTCCTTCAACCAGTTTTGGGGAGCAGTACCAACTGGCGGTGTTTTTAAGAATGCAAGTGCGACTTCAGTTGCTGGAAATGCTAGACTCTGCGGAGGTATGGCTAGTCTTCGACTTCCTCTATGCAAGCTTAATGAGTCTAAAGGAGAAGCCCTATCTCGTAGAATGAAGCTAATGATCTCTCTAGTCTCCGGGTTCAGCCTTTTGGGATTGGTGGTGCTGTCTCTTTTTCTTCTTGGTAAGAAAAAGAAAGAAACTAATTTAAGCACTTTGGGGAACTCTGTTTTGCAAGTTTCATATGCGACACTCCTCAGAGCTACCGATGGTTTTTCTTCAGCTAATTTGATCGGTGTGGGTGCTTTTGGGTCTGTGTACAAAGGAATCCTTGCTGATGAAAGAGTTGTTGTCGCTGTGAAGGTGCTTAACATGTTACACCAGGGAGCAGCTAAGAGTTTCATGGCCGAATGTGAGGCATTGAGAAATATCAGACATCGAAATTTGGTCAAGATCTTAACTGCATGTTCAAGTATTGATTTTGGCGGCAATGATTTCAAGGCTCTTGTTTACGAGGTCATGGACAATGGGAGCTTAGAAGAGTGGTTGCATCCATCTACTGGAACTGGAGAGGCAACAGAAGCACCCAAAATTTTAAGTCTTATTCAGAGGCTCAACATTGCCATTGATGTTGCTAGTGCATTGGATTATCTTCACAACCATTGTGAAACACCGATCGTTCATTGTGATCTCAAGCCAAGTAATGTTCTCATGGATGGTGACCTGACTGGACATGTTTCTGACTTTGGGCTGTCAAGGTTTCTCTCAGAACCAACCATGAGTGTTTCTGGAAATCAATCAAGCTCTATTGGAATTAGAGGATCGGTTGGTTATGCTGCACCAGAGTATGGTATGGGAAGTGAGGTATCCACATACGGGGATGTCTACAGCTTTGGCATTGTCTTGTTAGAAATGTTTACGGGGAAGCGACCCACTGATCACATGTTTAGTGACAGCTTGAATCTTCATAATTATGTGAAGACAGCCCTCCCTGAACTAGTTTCAGAGATTTCAGAATCACTTGTTCTTCAAGAAGGCACCACTAATGTCACTGAAGCTCACAGGCACAGCCGATTGACTGTGACAGCACAGAAAATTGAAGAGTGCTTGACTCTGATACTTGGTATAGGAATTGCATGTTCTGTTGAATCCCCCACAAACAGAAAGGATATAAGTGATGTTGCATCTGAATTGCAATCCATTAGGCGCAATCTTCTCAACTAG

Protein Analysis

617

Amino Acids

66.55

Weight (kDa)

5.69

Isoelectric Point (pI)

38.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 104 - 186 4.4e-06 Leucine-rich repeat region
Pkinase PF00069 304 - 537 1.2e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 306 - 528 1e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1667
AccB7I CCANNNNNTGG 2 cut(s) 1190, 1478
AccI GTMKAC 1 cut(s) 1515
AciI CCGC 4 cut(s) 248, 615, 669, 1116
AclWI GGATC 2 cut(s) 561, 1459
AcoI YGGCCR 1 cut(s) 1035
AcsI RAATTY 4 cut(s) 118, 346, 1072, 1221
AcuI CTGAAG 4 cut(s) 362, 627, 894, 1704
AfaI GTAC 4 cut(s) 429, 569, 606, 950
AfiI CCNNNNNNNGG 7 cut(s) 186, 325, 595, 614, 1190, 1478, 1506
AflIII ACRYGT 3 cut(s) 1002, 1363, 1572
AgsI TTSAA 8 cut(s) 295, 586, 1101, 1129, 1591, 1661, 1730, 1778
AhlI ACTAGT 1 cut(s) 1627
AjnI CCWGG 1 cut(s) 1011
Alw26I GTCTC 2 cut(s) 769, 804
AlwI GGATC 2 cut(s) 561, 1459
AlwNI CAGNNNCTG 1 cut(s) 650
AoxI GGCC 2 cut(s) 262, 1035
ApeKI GCWGC 3 cut(s) 46, 1019, 1466
ApoI RAATTY 4 cut(s) 118, 346, 1072, 1221
Asp700I GAANNNNTTC 1 cut(s) 213
AspA2I CCTAGG 1 cut(s) 184
AspLEI GCGC 1 cut(s) 1839
AspS9I GGNCC 1 cut(s) 458
AsuC2I CCSGG 1 cut(s) 769
AsuHPI GGTGA 1 cut(s) 1361
AvaII GGWCC 1 cut(s) 458
AvrII CCTAGG 1 cut(s) 184
BanI GGYRCC 1 cut(s) 1667
BbsI GAAGAC 2 cut(s) 677, 1616
BbvCI CCTCAGC 1 cut(s) 404
BbvI GCAGC 3 cut(s) 58, 1031, 1453
BccI CCATC 5 cut(s) 112, 319, 893, 1192, 1340
BciT130I CCWGG 1 cut(s) 1013
BciVI GTATCC 1 cut(s) 1507
BclI TGATCA 1 cut(s) 1567
BcnI CCSGG 1 cut(s) 769
BcoDI GTCTC 2 cut(s) 769, 804
BcuI ACTAGT 1 cut(s) 1627
BfaI CTAG 7 cut(s) 185, 660, 681, 761, 1266, 1628, 1852
BfmI CTRYAG 2 cut(s) 161, 1516
BfuI GTATCC 1 cut(s) 1507
BglII AGATCT 1 cut(s) 1083
BisI GCNGC 4 cut(s) 47, 1020, 1117, 1467
BlnI CCTAGG 1 cut(s) 184
BlsI GCNGC 4 cut(s) 48, 1021, 1118, 1468
BmcAI AGTACT 1 cut(s) 429
Bme1390I CCNGG 2 cut(s) 769, 1013
Bme18I GGWCC 1 cut(s) 458
BmgT120I GGNCC 1 cut(s) 458
BmiI GGNNCC 4 cut(s) 316, 459, 460, 1669
BmrFI CCNGG 2 cut(s) 769, 1013
BmrI ACTGGG 1 cut(s) 390
BmsI GCATC 4 cut(s) 36, 180, 1189, 1823
BmuI ACTGGG 1 cut(s) 390
BpiI GAAGAC 2 cut(s) 677, 1616
BpmI CTGGAG 1 cut(s) 1218
Bpu10I CCTNAGC 1 cut(s) 404
BpuEI CTTGAG 3 cut(s) 80, 569, 1307
BpuMI CCSGG 1 cut(s) 769
BsaJI CCNNGG 2 cut(s) 184, 1012
Bsc4I CCNNNNNNNGG 7 cut(s) 186, 325, 595, 614, 1190, 1478, 1506
Bse1I ACTGG 9 cut(s) 203, 316, 363, 396, 589, 616, 1195, 1201, 1363
Bse3DI GCAATG 2 cut(s) 1126, 1248
BseBI CCWGG 1 cut(s) 1013
BseDI CCNNGG 2 cut(s) 184, 1012
BseGI GGATG 5 cut(s) 27, 171, 1180, 1351, 1516
BseLI CCNNNNNNNGG 7 cut(s) 186, 325, 595, 614, 1190, 1478, 1506
BseMI GCAATG 2 cut(s) 1126, 1248
BseMII CTCAG 3 cut(s) 418, 901, 1410
BseNI ACTGG 9 cut(s) 203, 316, 363, 396, 589, 616, 1195, 1201, 1363
BseRI GAGGAG 1 cut(s) 875
BseXI GCAGC 3 cut(s) 58, 1031, 1453
BsgI GTGCAG 1 cut(s) 1452
Bsh1285I CGRYCG 1 cut(s) 1308
BshFI GGCC 2 cut(s) 264, 1037
BshNI GGYRCC 1 cut(s) 1667
BsiEI CGRYCG 1 cut(s) 1308
BsiSI CCGG 1 cut(s) 768
BslFI GGGAC 1 cut(s) 471
BslI CCNNNNNNNGG 7 cut(s) 186, 325, 595, 614, 1190, 1478, 1506
BsmAI GTCTC 2 cut(s) 769, 804
BsmFI GGGAC 1 cut(s) 471
BsmI GAATGC 2 cut(s) 99, 634
BsnI GGCC 2 cut(s) 264, 1037
Bsp1407I TGTACA 1 cut(s) 948
Bsp143I GATC 8 cut(s) 553, 753, 921, 1083, 1305, 1318, 1451, 1567
BspACI CCGC 4 cut(s) 248, 615, 669, 1116
BspANI GGCC 2 cut(s) 264, 1037
BspCNI CTCAG 3 cut(s) 417, 900, 1409
BspLI GGNNCC 4 cut(s) 316, 459, 460, 1669
BspPI GGATC 2 cut(s) 561, 1459
BspT107I GGYRCC 1 cut(s) 1667
BsrDI GCAATG 2 cut(s) 1126, 1248
BsrGI TGTACA 1 cut(s) 948
BsrI ACTGG 9 cut(s) 203, 316, 363, 396, 589, 616, 1195, 1201, 1363
BssECI CCNNGG 2 cut(s) 184, 1012
BssMI GATC 8 cut(s) 553, 753, 921, 1083, 1305, 1318, 1451, 1567
BssT1I CCWWGG 1 cut(s) 184
Bst2UI CCWGG 1 cut(s) 1013
Bst4CI ACNGT 2 cut(s) 283, 1711
Bst6I CTCTTC 2 cut(s) 1164, 1725
BstAUI TGTACA 1 cut(s) 948
BstC8I GCNNGC 1 cut(s) 704
BstDEI CTNAG 6 cut(s) 404, 421, 887, 1023, 1165, 1396
BstEII GGTNACC 1 cut(s) 1349
BstF5I GGATG 5 cut(s) 27, 171, 1180, 1351, 1516
BstHHI GCGC 1 cut(s) 1839
BstKTI GATC 8 cut(s) 556, 756, 924, 1086, 1308, 1321, 1454, 1570
BstMAI GTCTC 2 cut(s) 769, 804
BstMBI GATC 8 cut(s) 553, 753, 921, 1083, 1305, 1318, 1451, 1567
BstMCI CGRYCG 1 cut(s) 1308
BstMWI GCNNNNNNNGC 3 cut(s) 55, 656, 1211
BstNI CCWGG 1 cut(s) 1013
BstNSI RCATGY 5 cut(s) 1006, 1098, 1367, 1576, 1770
BstPI GGTNACC 1 cut(s) 1349
BstSCI CCNGG 2 cut(s) 767, 1011
BstSFI CTRYAG 2 cut(s) 161, 1516
BstV1I GCAGC 3 cut(s) 58, 1031, 1453
BstV2I GAAGAC 2 cut(s) 677, 1616
BstX2I RGATCY 2 cut(s) 553, 1083
BstXI CCANNNNNNTGG 2 cut(s) 260, 311
BstYI RGATCY 2 cut(s) 553, 1083
BsuI GTATCC 1 cut(s) 1507
BsuRI GGCC 2 cut(s) 264, 1037
BtsCI GGATG 5 cut(s) 27, 171, 1180, 1351, 1516
BtsIMutI CAGTG 4 cut(s) 196, 309, 1563, 1680
Cac8I GCNNGC 1 cut(s) 704
CaiI CAGNNNCTG 1 cut(s) 650
CfoI GCGC 1 cut(s) 1839
Cfr13I GGNCC 1 cut(s) 458
Csp6I GTAC 4 cut(s) 428, 568, 605, 949
CspCI CAANNNNNGTGG 2 cut(s) 22, 57
CviAII CATG 9 cut(s) 1003, 1033, 1095, 1150, 1342, 1364, 1408, 1573, 1767
CviQI GTAC 4 cut(s) 428, 568, 605, 949
DdeI CTNAG 6 cut(s) 404, 421, 887, 1023, 1165, 1396
DpnI GATC 8 cut(s) 555, 755, 923, 1085, 1307, 1320, 1453, 1569
DpnII GATC 8 cut(s) 553, 753, 921, 1083, 1305, 1318, 1451, 1567
EaeI YGGCCR 1 cut(s) 1035
Eam1104I CTCTTC 2 cut(s) 1164, 1725
EarI CTCTTC 2 cut(s) 1164, 1725
Eco130I CCWWGG 1 cut(s) 184
Eco47I GGWCC 1 cut(s) 458
Eco57I CTGAAG 4 cut(s) 362, 627, 894, 1704
Eco91I GGTNACC 1 cut(s) 1349
EcoO109I RGGNCCY 1 cut(s) 458
EcoO65I GGTNACC 1 cut(s) 1349
EcoRII CCWGG 1 cut(s) 1011
EcoT14I CCWWGG 1 cut(s) 184
ErhI CCWWGG 1 cut(s) 184
FaeI CATG 9 cut(s) 1006, 1036, 1098, 1153, 1345, 1367, 1411, 1576, 1770
FalI AAGNNNNNCTT 4 cut(s) 625, 657, 945, 977
FaqI GGGAC 1 cut(s) 471
FatI CATG 9 cut(s) 1002, 1032, 1094, 1149, 1341, 1363, 1407, 1572, 1766
FauNDI CATATG 1 cut(s) 874
FbaI TGATCA 1 cut(s) 1567
FblI GTMKAC 1 cut(s) 1515
Fnu4HI GCNGC 4 cut(s) 47, 1020, 1117, 1467
FokI GGATG 5 cut(s) 14, 158, 1167, 1358, 1523
Fsp4HI GCNGC 4 cut(s) 47, 1020, 1117, 1467
FspBI CTAG 7 cut(s) 185, 660, 681, 761, 1266, 1628, 1852
GlaI GCGC 1 cut(s) 1838
GluI GCNGC 4 cut(s) 47, 1020, 1117, 1467
GsuI CTGGAG 1 cut(s) 1218
HaeIII GGCC 2 cut(s) 264, 1037
HapII CCGG 1 cut(s) 768
HhaI GCGC 1 cut(s) 1839
Hin1II CATG 9 cut(s) 1006, 1036, 1098, 1153, 1345, 1367, 1411, 1576, 1770
Hin6I GCGC 1 cut(s) 1837
HinP1I GCGC 1 cut(s) 1837
HincII GTYRAC 2 cut(s) 132, 356
HindII GTYRAC 2 cut(s) 132, 356
HindIII AAGCTT 1 cut(s) 704
HinfI GANTC 9 cut(s) 493, 535, 663, 713, 957, 1591, 1646, 1741, 1778
HpaI GTTAAC 1 cut(s) 132
HpaII CCGG 1 cut(s) 768
HphI GGTGA 1 cut(s) 1361
Hpy166II GTNNAC 6 cut(s) 132, 356, 949, 1141, 1516, 1548
Hpy188III TCNNGA 8 cut(s) 6, 222, 384, 497, 548, 1081, 1419, 1661
Hpy8I GTNNAC 6 cut(s) 132, 356, 949, 1141, 1516, 1548
HpyAV CCTTC 6 cut(s) 25, 329, 477, 592, 985, 1658
HpyCH4III ACNGT 2 cut(s) 283, 1711
HpyCH4IV ACGT 1 cut(s) 363
HpyF10VI GCNNNNNNNGC 3 cut(s) 55, 656, 1211
HpyF3I CTNAG 6 cut(s) 404, 421, 887, 1023, 1165, 1396
HpySE526I ACGT 1 cut(s) 363
Hsp92II CATG 9 cut(s) 1006, 1036, 1098, 1153, 1345, 1367, 1411, 1576, 1770
HspAI GCGC 1 cut(s) 1837
KflI GGGWCCC 1 cut(s) 458
Ksp22I TGATCA 1 cut(s) 1567
KspAI GTTAAC 1 cut(s) 132
Kzo9I GATC 8 cut(s) 553, 753, 921, 1083, 1305, 1318, 1451, 1567
LmnI GCTCC 4 cut(s) 96, 599, 1016, 1161
Lsp1109I GCAGC 3 cut(s) 58, 1031, 1453
LweI GCATC 4 cut(s) 36, 180, 1189, 1823
MaeI CTAG 7 cut(s) 185, 660, 681, 761, 1266, 1628, 1852
MaeII ACGT 1 cut(s) 363
MaeIII GTNAC 5 cut(s) 1005, 1349, 1580, 1678, 1711
MalI GATC 8 cut(s) 555, 755, 923, 1085, 1307, 1320, 1453, 1569
MboI GATC 8 cut(s) 553, 753, 921, 1083, 1305, 1318, 1451, 1567
MfeI CAATTG 2 cut(s) 143, 409
MflI RGATCY 2 cut(s) 553, 1083
MlyI GAGTC 3 cut(s) 657, 722, 1735
MroXI GAANNNNTTC 1 cut(s) 213
MslI CAYNNNNRTG 1 cut(s) 1602
MspI CCGG 1 cut(s) 768
MspR9I CCNGG 2 cut(s) 769, 1013
MunI CAATTG 2 cut(s) 143, 409
Mva1269I GAATGC 2 cut(s) 99, 634
MvaI CCWGG 1 cut(s) 1013
MwoI GCNNNNNNNGC 3 cut(s) 55, 656, 1211
NciI CCSGG 1 cut(s) 769
NdeI CATATG 1 cut(s) 874
NdeII GATC 8 cut(s) 553, 753, 921, 1083, 1305, 1318, 1451, 1567
NlaIII CATG 9 cut(s) 1006, 1036, 1098, 1153, 1345, 1367, 1411, 1576, 1770
NlaIV GGNNCC 4 cut(s) 316, 459, 460, 1669
NmuCI GTSAC 4 cut(s) 1349, 1580, 1678, 1711
NspI RCATGY 5 cut(s) 1006, 1098, 1367, 1576, 1770
PciI ACATGT 3 cut(s) 1002, 1363, 1572
PctI GAATGC 2 cut(s) 99, 634
PdmI GAANNNNTTC 1 cut(s) 213
PfeI GAWTC 6 cut(s) 493, 535, 957, 1591, 1646, 1778
PflMI CCANNNNNTGG 2 cut(s) 1190, 1478
PkrI GCNGC 4 cut(s) 48, 1021, 1118, 1468
Ple19I CGATCG 1 cut(s) 1308
PleI GAGTC 3 cut(s) 657, 721, 1735
PpsI GAGTC 3 cut(s) 657, 721, 1735
PpuMI RGGWCCY 1 cut(s) 458
PscI ACATGT 3 cut(s) 1002, 1363, 1572
Psp5II RGGWCCY 1 cut(s) 458
Psp6I CCWGG 1 cut(s) 1011
PspEI GGTNACC 1 cut(s) 1349
PspGI CCWGG 1 cut(s) 1011
PspN4I GGNNCC 4 cut(s) 316, 459, 460, 1669
PspPI GGNCC 1 cut(s) 458
PspPPI RGGWCCY 1 cut(s) 458
PsrI GAACNNNNNNTAC 2 cut(s) 551, 583
PstNI CAGNNNCTG 1 cut(s) 650
PsuI RGATCY 2 cut(s) 553, 1083
PvuI CGATCG 1 cut(s) 1308
RsaI GTAC 4 cut(s) 429, 569, 606, 950
RsaNI GTAC 4 cut(s) 428, 568, 605, 949
RseI CAYNNNNRTG 1 cut(s) 1602
SatI GCNGC 4 cut(s) 47, 1020, 1117, 1467
Sau3AI GATC 8 cut(s) 553, 753, 921, 1083, 1305, 1318, 1451, 1567
Sau96I GGNCC 1 cut(s) 458
ScaI AGTACT 1 cut(s) 429
SchI GAGTC 3 cut(s) 657, 722, 1735
ScrFI CCNGG 2 cut(s) 769, 1013
SfaNI GCATC 4 cut(s) 36, 180, 1189, 1823
SfcI CTRYAG 2 cut(s) 161, 1516
SinI GGWCC 1 cut(s) 458
SmiMI CAYNNNNRTG 1 cut(s) 1602
SmlI CTYRAG 3 cut(s) 59, 548, 1322
SmoI CTYRAG 3 cut(s) 59, 548, 1322
SpeI ACTAGT 1 cut(s) 1627
SsiI CCGC 4 cut(s) 248, 615, 669, 1116
SspMI CTAG 7 cut(s) 185, 660, 681, 761, 1266, 1628, 1852
StyD4I CCNGG 2 cut(s) 767, 1011
StyI CCWWGG 1 cut(s) 184
TaaI ACNGT 2 cut(s) 283, 1711
TaiI ACGT 1 cut(s) 366
TaqI TCGA 3 cut(s) 496, 688, 1069
TatI WGTACW 2 cut(s) 427, 948
TauI GCSGC 1 cut(s) 1119
TfiI GAWTC 6 cut(s) 493, 535, 957, 1591, 1646, 1778
TscAI CASTG 4 cut(s) 203, 316, 1570, 1687
TseFI GTSAC 4 cut(s) 1349, 1580, 1678, 1711
TseI GCWGC 3 cut(s) 46, 1019, 1466
Tsp45I GTSAC 4 cut(s) 1349, 1580, 1678, 1711
TspDTI ATGAA 9 cut(s) 459, 491, 495, 758, 861, 984, 1021, 1301, 1586
TspRI CASTG 4 cut(s) 203, 316, 1570, 1687
Van91I CCANNNNNTGG 2 cut(s) 1190, 1478
VpaK11BI GGWCC 1 cut(s) 458
XapI RAATTY 4 cut(s) 118, 346, 1072, 1221
XceI RCATGY 5 cut(s) 1006, 1098, 1367, 1576, 1770
XmaJI CCTAGG 1 cut(s) 184
XmiI GTMKAC 1 cut(s) 1515
XmnI GAANNNNTTC 1 cut(s) 213
XspI CTAG 7 cut(s) 185, 660, 681, 761, 1266, 1628, 1852
ZrmI AGTACT 1 cut(s) 429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.