MD00G1048300.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
9058068 .. 9061103
3036 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1048300.v1.1.491

Sequence Viewer

Length: 3036 bp
ATGGCAGGCCACCTATCTCCCCACATTGGAAACTTGAGCTTTCTGCGGGCTTTATACCTCCATAACAATAGCTTCAGCCACACCATCCCTCCAGAAATTGGTCGTTTGTTCCACTTGCAAAGACTAGGCCTTGAAAACAACTCCTTCAGTGGTCATATTCCATTCAACATATCAAGTTGCTCTAACCTCCAATACCTTGGCTTATTAGGCAACACTCTTAGTGGCGAACTTCCAACTGAAATTGCCTCATTGTCCAAGCTTCAGTTTCTTGATTTAGGCAAGAACAATTTTTCTGGGAAAATCCCACCTTCTTTTGGGAATCTTTCTTGTCTTTGGATGTTATCTGTGATTGAAAATAATCTGCATGGAGGTATTCCAAATAGCCTTGGCCAGTTGAAAAGCTTAATGGCTTTCTTATTGGCTGTCAATTATTTGAATGGTACCGTTCCTCCCTCCATATACAACCTCTCGTCAATTAAATTCATTTATATGGCTCAAAACAACCTTCATGGAACTCTTCCTCCTGGCTTGGGCCACACTATATTTCCAAACCTCGAAACCTTTGTTTTCTATGCCAATCAATTCACTGGACCAGTACCAGCTTCAATCTCCAATGCCTCAAACCTTTCAGTATTTTCTATCTCTTCCAATAAGTTTACTGGGAAAGTGCCTAGTCTGGCACGCCTGTCAAATTTGTATTTGTTTGGACCTAATGATAACAATCTTGGAAATAATGAGGAAGGTGACTTGGATTTCATCTCTTCTCTAGTTAATTGCACCAATTTAGAAGTTTTAGATATCAGTGCCAATAGTTTTGGAGGAGTGATGCCTGAATCTGTCAGTAATCTCTCAACAAAGCTCAGGAAAATATTTTTCTATGAGAATCAGATACACGGAAGCATTCCCATCGGAGTTGGAAATCTTATCAACTTGGAGATACTAAACTTTCATGCAAATTTATTGGCAGGCACTATACCGAGTTCAATAGGTAAACTGAATAAGCTTTATGACCTATATCTAGATTCGAATGAATTGTCAGGTAATGTTCCATCATCTCTAGGAAATCTTTCTTCATTAAGCAACTTGTATCTCAGCTCAAACAAGTTAAATGGAAGCATACCACAAAGTCTCGGAGACTGCAGGTTTATGTTAGAATTGGATCTTTCCCACAACAATCTTAGCGGTCCAATTCCAAAACAAGTCATCAATTTACATGTTCACTTGGATCTACCTGGAAACCAACTTGTTCACTTGGATCTATCTGGAAACCAACTTACTGAATCCATTCCCATGGAAGTAGGTAACTTGCCGCATCTTGTTTTCTTGGATGTTTCTGAAAACAAGTTATCTGGTGAGATTCCACAAAGCTTAGGGAGTTGCACAAGTTTGACGACTCTGTCTCTGAGAGAAAATTTATTGCATGGGATAATTCCTAAATCCTTGAGCTCTTTGGGAGGAATTGAAGATTTCGACCTCTCTCGCAACAAATTGTCTGGCATAATTCCCAACTACTTGGGGAGTTTCCCCTTCTTGCATAATTTGAACCTTTCATTTAACGATTTTGAAGGTGCAGTACCAATCCAAGGAGTTTTTAAGAATGCAAGTGCGGTATCTATTGTGGGAAACACACGGCTTTGTGGAGGTATACCTCACTTAAGATTGCTTAAATGCATCTCCAAGCAATCTAAGCGCGGGTTATCTCCTAAGCTGAACTTAATTATCTCAGTTTCCTGTGGGGTTGTCGGCTTGGTCTTGGTGTTGTTACTCGCGCTTCTTTATCGATCAAGAAAGGCTAGAGCGCTTAAGTCAACTTCAGGATCATCATTGGGGGTTTCACTCTTGAAACTATCCTATGGAGATCTCTTCAAAGCAACTGATGGGTTCTCTGCTTCGAATCTGATTGGTGCTGGAAGTTTTGGGTCCGTGTACAAGGGAGTTCTCAATCAGCATGAAGAAATAAATGTTGCGGTGAAAGTACTAAATCTTCGAACTTCAAGAGCTTCTAAAAGTTTCATAACTGAATGTGAAGCCTTGAAAAGCATTAGGCATCGAAATCTTGTCAAGCTAATGACTGCTTGTTCAAGCATTGATTTTCAAGGAAACGATTTCAAAGCCCTAGTGTATGAGTTCATGGTGAATGGAAGCCTAGATGAGTGGCTGCACATATCAACTCAAGGAGTAGATAGGCCAGCCAATCTGCCAAAGAACCTGAACCTCACTCAAAGAGTTAACATTGCCATCGATGTAGCGTGTGCTCTGGATTATTTGCACAACCGCTTCCACATGCCAATAGTTCATTGTGATATAAAGCCCAGCAACATTTTGTTAGACAGTGACATGACTGCTTGTGTAGGTGATTTCGGTTTAGCAAGGTACTTCCGAGATGCTTCTTGCCCATCTCCTTTGCACGAAAGCAGTTCCAGTGTCATAAAAGGCTCCATGGGCTATACTCCCCCAGGTAAATTTTCTTTTACATACATAAACATACATACATACGTGTATACATACATATATATATATATATATATATATAGCATGAGTTTTTTCAAGACACACATAAGAACAAAGCTATGTTTTTGTGCATATAACTTAAAAGAGTATGGAATGGGAAGCGAGGTGGCAACATATGGTGACATGTATAGCTATGGAATACTGTTGTTGGAGATGTTAATTGGCAAGAGGCCAACATATGAGATGTTTAAAGATGGTATGAACTTGCACAGTTTTGTTTCGATGGCTCTACCAGGACATGTGGAAGAAATATGTGATCCACTACTTGTTCAAATAGAAGAAAGCAAAAGCAGTACTAATCCCAGAAGTAACAGGGGGAATCATACCCCAAATGATCAAAGAAAAAGGGTTGTGGGGTGCTTGACTTCCATTGCAAGAGTGGGAGTGGCTTGTTCTGTAGCGATGCTGAGGGAGCGAAAAGACATGAGCAATGTGGTCACTGAATTGAGTCTAATAAGGGACATGCTAACTGGAATCAGATGCCAAGTGAGCTTCTCTGATCAAGGCCTATGTAGTGAGAAATAA

Protein Analysis

1012

Amino Acids

110.62

Weight (kDa)

8.1

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 57 - 136 1.5e-10 Leucine-rich repeat region
LRR_14 PF23598 251 - 379 3.3e-09 Leucine-rich repeat region
LRR_14 PF23598 414 - 520 7.2e-06 Leucine-rich repeat region
LRR_8 PF13855 462 - 521 2.8e-07 Leucine rich repeat
Pkinase PF00069 630 - 819 5.3e-28 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 631 - 797 4.8e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1396
Acc36I ACCTGC 1 cut(s) 1131
Acc65I GGTACC 1 cut(s) 440
AccB1I GGYRCC 1 cut(s) 440
AccB7I CCANNNNNTGG 1 cut(s) 98
AccI GTMKAC 2 cut(s) 1645, 2501
AccII CGCG 2 cut(s) 1692, 1769
AciI CCGC 7 cut(s) 46, 1182, 1310, 1607, 1692, 1967, 2275
AclWI GGATC 5 cut(s) 1167, 1233, 1263, 1825, 2762
AcoI YGGCCR 1 cut(s) 388
AcsI RAATTY 5 cut(s) 479, 691, 955, 1411, 2462
AcuI CTGAAG 4 cut(s) 58, 130, 245, 1797
AfaI GTAC 7 cut(s) 442, 597, 1575, 1928, 1977, 2375, 2806
AfeI AGCGCT 1 cut(s) 1800
AfiI CCNNNNNNNGG 5 cut(s) 26, 98, 314, 530, 1583
AflII CTTAAG 2 cut(s) 1654, 1802
AflIII ACRYGT 4 cut(s) 1213, 2496, 2634, 2749
AjnI CCWGG 4 cut(s) 523, 1231, 2455, 2743
AloI GAACNNNNNNTCC 2 cut(s) 505, 537
Alw21I GWGCWC 2 cut(s) 1448, 2257
Alw26I GTCTC 3 cut(s) 1128, 1133, 1404
AlwI GGATC 5 cut(s) 1167, 1233, 1263, 1825, 2762
Aor51HI AGCGCT 1 cut(s) 1800
AoxI GGCC 7 cut(s) 7, 127, 388, 532, 2186, 2681, 3016
ApeKI GCWGC 1 cut(s) 2158
ApoI RAATTY 5 cut(s) 479, 691, 955, 1411, 2462
ArsI GACNNNNNNTTYG 2 cut(s) 1019, 1051
Asp700I GAANNNNTTC 2 cut(s) 1066, 1284
Asp718I GGTACC 1 cut(s) 440
AspLEI GCGC 3 cut(s) 1692, 1771, 1801
AspS9I GGNCC 5 cut(s) 532, 590, 707, 1184, 1920
AsuHPI GGTGA 6 cut(s) 755, 1364, 1981, 2146, 2366, 2642
AsuII TTCGAA 3 cut(s) 1025, 1892, 1987
AvaII GGWCC 4 cut(s) 590, 707, 1184, 1920
BalI TGGCCA 1 cut(s) 390
BanI GGYRCC 1 cut(s) 440
BanII GRGCYC 1 cut(s) 1448
BarI GAAGNNNNNNTAC 4 cut(s) 1557, 1589, 1968, 2000
Bbv12I GWGCWC 2 cut(s) 1448, 2257
BbvCI CCTCAGC 1 cut(s) 2918
BbvI GCAGC 1 cut(s) 2145
BccI CCATC 8 cut(s) 92, 914, 1057, 1871, 2246, 2404, 2699, 2728
BceAI ACGGC 1 cut(s) 1646
BcgI CGANNNNNNTGC 2 cut(s) 889, 923
BciT130I CCWGG 4 cut(s) 525, 1233, 2457, 2745
BclI TGATCA 2 cut(s) 2845, 3010
BcoDI GTCTC 3 cut(s) 1128, 1133, 1404
BfaI CTAG 8 cut(s) 125, 672, 767, 1019, 1058, 1794, 2117, 2147
BfmI CTRYAG 2 cut(s) 1138, 2907
BfoI RGCGCY 1 cut(s) 1802
BfrI CTTAAG 2 cut(s) 1654, 1802
BfuAI ACCTGC 1 cut(s) 1131
BglII AGATCT 1 cut(s) 1858
BisI GCNGC 2 cut(s) 1310, 2159
BlsI GCNGC 2 cut(s) 1311, 2160
BmcAI AGTACT 2 cut(s) 1977, 2806
Bme1390I CCNGG 4 cut(s) 525, 1233, 2457, 2745
Bme18I GGWCC 4 cut(s) 590, 707, 1184, 1920
BmgT120I GGNCC 5 cut(s) 532, 590, 707, 1184, 1920
BmiI GGNNCC 3 cut(s) 442, 1921, 2437
BmrFI CCNGG 4 cut(s) 525, 1233, 2457, 2745
BmrI ACTGGG 1 cut(s) 669
BmsI GCATC 7 cut(s) 816, 1321, 1680, 2056, 2374, 2904, 2981
BmuI ACTGGG 1 cut(s) 669
BpmI CTGGAG 1 cut(s) 75
Bpu10I CCTNAGC 4 cut(s) 860, 1369, 1704, 2918
Bpu14I TTCGAA 3 cut(s) 1025, 1892, 1987
BpuEI CTTGAG 3 cut(s) 55, 1462, 2157
Bsa29I ATCGAT 2 cut(s) 1780, 2241
BsaAI YACGTR 1 cut(s) 2497
BsaBI GATNNNNATC 1 cut(s) 720
BsaJI CCNNGG 6 cut(s) 196, 385, 1290, 1582, 2439, 2455
BsaXI ACNNNNNCTCC 6 cut(s) 73, 103, 433, 463, 505, 535
Bsc4I CCNNNNNNNGG 5 cut(s) 26, 98, 314, 530, 1583
Bse1I ACTGG 6 cut(s) 391, 592, 593, 664, 2421, 2986
Bse3DI GCAATG 3 cut(s) 2232, 2880, 2947
Bse8I GATNNNNATC 1 cut(s) 720
BseBI CCWGG 4 cut(s) 525, 1233, 2457, 2745
BseCI ATCGAT 2 cut(s) 1780, 2241
BseDI CCNNGG 6 cut(s) 196, 385, 1290, 1582, 2439, 2455
BseGI GGATG 3 cut(s) 84, 342, 1333
BseJI GATNNNNATC 1 cut(s) 720
BseLI CCNNNNNNNGG 5 cut(s) 26, 98, 314, 530, 1583
BseMI GCAATG 3 cut(s) 2232, 2880, 2947
BseMII CTCAG 5 cut(s) 874, 1105, 1394, 1737, 2909
BseNI ACTGG 6 cut(s) 391, 592, 593, 664, 2421, 2986
BseRI GAGGAG 1 cut(s) 834
BseXI GCAGC 1 cut(s) 2145
BseYI CCCAGC 1 cut(s) 2312
BsgI GTGCAG 2 cut(s) 1590, 2144
Bsh1236I CGCG 2 cut(s) 1692, 1769
BshFI GGCC 7 cut(s) 9, 129, 390, 534, 2188, 2683, 3018
BshNI GGYRCC 1 cut(s) 440
BshVI ATCGAT 2 cut(s) 1780, 2241
BsiHKAI GWGCWC 2 cut(s) 1448, 2257
BslFI GGGAC 1 cut(s) 2984
BslI CCNNNNNNNGG 5 cut(s) 26, 98, 314, 530, 1583
BsmAI GTCTC 3 cut(s) 1128, 1133, 1404
BsmFI GGGAC 1 cut(s) 2984
BsmI GAATGC 2 cut(s) 900, 1603
BsnI GGCC 7 cut(s) 9, 129, 390, 534, 2188, 2683, 3018
Bsp119I TTCGAA 3 cut(s) 1025, 1892, 1987
Bsp1286I GDGCHC 2 cut(s) 1448, 2257
Bsp1407I TGTACA 1 cut(s) 1926
Bsp143I GATC 9 cut(s) 1159, 1225, 1255, 1781, 1817, 1858, 2767, 2845, 3010
Bsp19I CCATGG 2 cut(s) 1290, 2439
BspACI CCGC 7 cut(s) 46, 1182, 1310, 1607, 1692, 1967, 2275
BspANI GGCC 7 cut(s) 9, 129, 390, 534, 2188, 2683, 3018
BspCNI CTCAG 5 cut(s) 873, 1104, 1395, 1736, 2910
BspDI ATCGAT 2 cut(s) 1780, 2241
BspFNI CGCG 2 cut(s) 1692, 1769
BspLI GGNNCC 3 cut(s) 442, 1921, 2437
BspMAI CTGCAG 1 cut(s) 1142
BspMI ACCTGC 1 cut(s) 1131
BspPI GGATC 5 cut(s) 1167, 1233, 1263, 1825, 2762
BspT104I TTCGAA 3 cut(s) 1025, 1892, 1987
BspT107I GGYRCC 1 cut(s) 440
BspTI CTTAAG 2 cut(s) 1654, 1802
BsrDI GCAATG 3 cut(s) 2232, 2880, 2947
BsrGI TGTACA 1 cut(s) 1926
BsrI ACTGG 6 cut(s) 391, 592, 593, 664, 2421, 2986
BssECI CCNNGG 6 cut(s) 196, 385, 1290, 1582, 2439, 2455
BssMI GATC 9 cut(s) 1159, 1225, 1255, 1781, 1817, 1858, 2767, 2845, 3010
BssNAI GTATAC 2 cut(s) 1646, 2502
BssT1I CCWWGG 5 cut(s) 196, 385, 1290, 1582, 2439
Bst1107I GTATAC 2 cut(s) 1646, 2502
Bst2UI CCWGG 4 cut(s) 525, 1233, 2457, 2745
Bst4CI ACNGT 4 cut(s) 445, 2333, 2655, 2723
Bst6I CTCTTC 4 cut(s) 522, 649, 766, 1868
BstAFI CTTAAG 2 cut(s) 1654, 1802
BstAUI TGTACA 1 cut(s) 1926
BstBAI YACGTR 1 cut(s) 2497
BstBI TTCGAA 3 cut(s) 1025, 1892, 1987
BstC8I GCNNGC 5 cut(s) 7, 48, 682, 967, 2190
BstDSI CCRYGG 2 cut(s) 1290, 2439
BstF5I GGATG 3 cut(s) 84, 342, 1333
BstFNI CGCG 2 cut(s) 1692, 1769
BstH2I RGCGCY 1 cut(s) 1802
BstHHI GCGC 3 cut(s) 1692, 1771, 1801
BstKTI GATC 9 cut(s) 1162, 1228, 1258, 1784, 1820, 1861, 2770, 2848, 3013
BstMAI GTCTC 3 cut(s) 1128, 1133, 1404
BstMBI GATC 9 cut(s) 1159, 1225, 1255, 1781, 1817, 1858, 2767, 2845, 3010
BstMWI GCNNNNNNNGC 5 cut(s) 207, 1687, 2442, 2923, 3000
BstNI CCWGG 4 cut(s) 525, 1233, 2457, 2745
BstNSI RCATGY 5 cut(s) 1217, 2287, 2638, 2753, 2977
BstSCI CCNGG 4 cut(s) 523, 1231, 2455, 2743
BstSFI CTRYAG 2 cut(s) 1138, 2907
BstUI CGCG 2 cut(s) 1692, 1769
BstV1I GCAGC 1 cut(s) 2145
BstX2I RGATCY 4 cut(s) 1159, 1225, 1255, 1858
BstXI CCANNNNNNTGG 3 cut(s) 197, 1291, 1513
BstYI RGATCY 4 cut(s) 1159, 1225, 1255, 1858
BstZ17I GTATAC 2 cut(s) 1646, 2502
Bsu15I ATCGAT 2 cut(s) 1780, 2241
BsuRI GGCC 7 cut(s) 9, 129, 390, 534, 2188, 2683, 3018
BsuTUI ATCGAT 2 cut(s) 1780, 2241
BtgI CCRYGG 2 cut(s) 1290, 2439
BtgZI GCGATG 1 cut(s) 2927
BtsCI GGATG 3 cut(s) 84, 342, 1333
BtsIMutI CAGTG 6 cut(s) 154, 585, 808, 2338, 2428, 2949
BveI ACCTGC 1 cut(s) 1131
Cac8I GCNNGC 5 cut(s) 7, 48, 682, 967, 2190
CfoI GCGC 3 cut(s) 1692, 1771, 1801
Cfr13I GGNCC 5 cut(s) 532, 590, 707, 1184, 1920
ClaI ATCGAT 2 cut(s) 1780, 2241
Csp6I GTAC 7 cut(s) 441, 596, 1574, 1927, 1976, 2374, 2805
CviQI GTAC 7 cut(s) 441, 596, 1574, 1927, 1976, 2374, 2805
DpnI GATC 9 cut(s) 1161, 1227, 1257, 1783, 1819, 1860, 2769, 2847, 3012
DpnII GATC 9 cut(s) 1159, 1225, 1255, 1781, 1817, 1858, 2767, 2845, 3010
DraI TTTAAA 1 cut(s) 2701
DrdI GACNNNNNNGTC 1 cut(s) 1396
DseDI GACNNNNNNGTC 1 cut(s) 1396
EaeI YGGCCR 1 cut(s) 388
Eam1104I CTCTTC 4 cut(s) 522, 649, 766, 1868
EarI CTCTTC 4 cut(s) 522, 649, 766, 1868
Ecl136II GAGCTC 1 cut(s) 1446
Eco130I CCWWGG 5 cut(s) 196, 385, 1290, 1582, 2439
Eco147I AGGCCT 2 cut(s) 129, 3018
Eco24I GRGCYC 1 cut(s) 1448
Eco32I GATATC 1 cut(s) 799
Eco47I GGWCC 4 cut(s) 590, 707, 1184, 1920
Eco47III AGCGCT 1 cut(s) 1800
Eco53kI GAGCTC 1 cut(s) 1446
Eco57I CTGAAG 4 cut(s) 58, 130, 245, 1797
EcoICRI GAGCTC 1 cut(s) 1446
EcoRII CCWGG 4 cut(s) 523, 1231, 2455, 2743
EcoRV GATATC 1 cut(s) 799
EcoT14I CCWWGG 5 cut(s) 196, 385, 1290, 1582, 2439
EcoT22I ATGCAT 1 cut(s) 1673
EcoT38I GRGCYC 1 cut(s) 1448
ErhI CCWWGG 5 cut(s) 196, 385, 1290, 1582, 2439
FalI AAGNNNNNCTT 2 cut(s) 1697, 1729
FaqI GGGAC 1 cut(s) 2984
FauI CCCGC 2 cut(s) 39, 1685
FauNDI CATATG 2 cut(s) 2626, 2689
FbaI TGATCA 2 cut(s) 2845, 3010
FblI GTMKAC 2 cut(s) 1645, 2501
Fnu4HI GCNGC 2 cut(s) 1310, 2159
FokI GGATG 3 cut(s) 71, 349, 1340
FriOI GRGCYC 1 cut(s) 1448
Fsp4HI GCNGC 2 cut(s) 1310, 2159
FspBI CTAG 8 cut(s) 125, 672, 767, 1019, 1058, 1794, 2117, 2147
GlaI GCGC 3 cut(s) 1691, 1770, 1800
GluI GCNGC 2 cut(s) 1310, 2159
GsaI CCCAGC 1 cut(s) 2316
GsuI CTGGAG 1 cut(s) 75
HaeII RGCGCY 1 cut(s) 1802
HaeIII GGCC 7 cut(s) 9, 129, 390, 534, 2188, 2683, 3018
HhaI GCGC 3 cut(s) 1692, 1771, 1801
Hin6I GCGC 3 cut(s) 1690, 1769, 1799
HinP1I GCGC 3 cut(s) 1690, 1769, 1799
HincII GTYRAC 2 cut(s) 1809, 2230
HindII GTYRAC 2 cut(s) 1809, 2230
HindIII AAGCTT 4 cut(s) 257, 400, 1001, 1366
HpaI GTTAAC 1 cut(s) 2230
HphI GGTGA 6 cut(s) 755, 1364, 1981, 2146, 2366, 2642
Hpy166II GTNNAC 9 cut(s) 657, 992, 1219, 1249, 1646, 1809, 1927, 2230, 2502
Hpy188I TCNGA 9 cut(s) 888, 911, 1133, 1336, 1404, 1899, 2381, 2990, 3010
Hpy8I GTNNAC 9 cut(s) 657, 992, 1219, 1249, 1646, 1809, 1927, 2230, 2502
HpyAV CCTTC 6 cut(s) 154, 318, 515, 734, 1537, 1559
HpyCH4III ACNGT 4 cut(s) 445, 2333, 2655, 2723
HpyCH4IV ACGT 1 cut(s) 2496
HpyF10VI GCNNNNNNNGC 5 cut(s) 207, 1687, 2442, 2923, 3000
HpySE526I ACGT 1 cut(s) 2496
HspAI GCGC 3 cut(s) 1690, 1769, 1799
KpnI GGTACC 1 cut(s) 444
Ksp22I TGATCA 2 cut(s) 2845, 3010
KspAI GTTAAC 1 cut(s) 2230
Kzo9I GATC 9 cut(s) 1159, 1225, 1255, 1781, 1817, 1858, 2767, 2845, 3010
LmnI GCTCC 2 cut(s) 2441, 2923
Lsp1109I GCAGC 1 cut(s) 2145
LweI GCATC 7 cut(s) 816, 1321, 1680, 2056, 2374, 2904, 2981
MaeI CTAG 8 cut(s) 125, 672, 767, 1019, 1058, 1794, 2117, 2147
MaeII ACGT 1 cut(s) 2496
MaeIII GTNAC 7 cut(s) 743, 1301, 1761, 2333, 2630, 2819, 2947
MalI GATC 9 cut(s) 1161, 1227, 1257, 1783, 1819, 1860, 2769, 2847, 3012
MboI GATC 9 cut(s) 1159, 1225, 1255, 1781, 1817, 1858, 2767, 2845, 3010
MflI RGATCY 4 cut(s) 1159, 1225, 1255, 1858
MhlI GDGCHC 2 cut(s) 1448, 2257
MlsI TGGCCA 1 cut(s) 390
MluNI TGGCCA 1 cut(s) 390
MlyI GAGTC 2 cut(s) 1387, 2968
MmeI TCCRAC 3 cut(s) 257, 895, 2640
Mox20I TGGCCA 1 cut(s) 390
Mph1103I ATGCAT 1 cut(s) 1673
MroXI GAANNNNTTC 2 cut(s) 1066, 1284
MscI TGGCCA 1 cut(s) 390
MslI CAYNNNNRTG 2 cut(s) 488, 1289
Msp20I TGGCCA 1 cut(s) 390
MspCI CTTAAG 2 cut(s) 1654, 1802
MspR9I CCNGG 4 cut(s) 525, 1233, 2457, 2745
Mva1269I GAATGC 2 cut(s) 900, 1603
MvaI CCWGG 4 cut(s) 525, 1233, 2457, 2745
MvnI CGCG 2 cut(s) 1692, 1769
MwoI GCNNNNNNNGC 5 cut(s) 207, 1687, 2442, 2923, 3000
NcoI CCATGG 2 cut(s) 1290, 2439
NdeI CATATG 2 cut(s) 2626, 2689
NdeII GATC 9 cut(s) 1159, 1225, 1255, 1781, 1817, 1858, 2767, 2845, 3010
NlaIV GGNNCC 3 cut(s) 442, 1921, 2437
NmuCI GTSAC 4 cut(s) 743, 2333, 2630, 2947
NsiI ATGCAT 1 cut(s) 1673
NspI RCATGY 5 cut(s) 1217, 2287, 2638, 2753, 2977
NspV TTCGAA 3 cut(s) 1025, 1892, 1987
PceI AGGCCT 2 cut(s) 129, 3018
PciI ACATGT 3 cut(s) 1213, 2634, 2749
PctI GAATGC 2 cut(s) 900, 1603
PdmI GAANNNNTTC 2 cut(s) 1066, 1284
PfeI GAWTC 9 cut(s) 319, 833, 883, 1022, 1280, 1357, 1894, 2830, 2985
PflFI GACNNNGTC 1 cut(s) 1396
PflMI CCANNNNNTGG 1 cut(s) 98
PkrI GCNGC 2 cut(s) 1311, 2160
PleI GAGTC 2 cut(s) 1387, 2967
PpsI GAGTC 2 cut(s) 1387, 2967
Ppu21I YACGTR 1 cut(s) 2497
PscI ACATGT 3 cut(s) 1213, 2634, 2749
Psp124BI GAGCTC 1 cut(s) 1448
Psp6I CCWGG 4 cut(s) 523, 1231, 2455, 2743
PspFI CCCAGC 1 cut(s) 2312
PspGI CCWGG 4 cut(s) 523, 1231, 2455, 2743
PspN4I GGNNCC 3 cut(s) 442, 1921, 2437
PspPI GGNCC 5 cut(s) 532, 590, 707, 1184, 1920
PstI CTGCAG 1 cut(s) 1142
PsuI RGATCY 4 cut(s) 1159, 1225, 1255, 1858
PsyI GACNNNGTC 1 cut(s) 1396
RsaI GTAC 7 cut(s) 442, 597, 1575, 1928, 1977, 2375, 2806
RsaNI GTAC 7 cut(s) 441, 596, 1574, 1927, 1976, 2374, 2805
RseI CAYNNNNRTG 2 cut(s) 488, 1289
SacI GAGCTC 1 cut(s) 1448
SatI GCNGC 2 cut(s) 1310, 2159
Sau3AI GATC 9 cut(s) 1159, 1225, 1255, 1781, 1817, 1858, 2767, 2845, 3010
Sau96I GGNCC 5 cut(s) 532, 590, 707, 1184, 1920
ScaI AGTACT 2 cut(s) 1977, 2806
SchI GAGTC 2 cut(s) 1387, 2968
ScrFI CCNGG 4 cut(s) 525, 1233, 2457, 2745
SduI GDGCHC 2 cut(s) 1448, 2257
SfaNI GCATC 7 cut(s) 816, 1321, 1680, 2056, 2374, 2904, 2981
SfcI CTRYAG 2 cut(s) 1138, 2907
SfuI TTCGAA 3 cut(s) 1025, 1892, 1987
SinI GGWCC 4 cut(s) 590, 707, 1184, 1920
SmiMI CAYNNNNRTG 2 cut(s) 488, 1289
SmlI CTYRAG 5 cut(s) 34, 1441, 1654, 1802, 2172
SmoI CTYRAG 5 cut(s) 34, 1441, 1654, 1802, 2172
SseBI AGGCCT 2 cut(s) 129, 3018
SsiI CCGC 7 cut(s) 46, 1182, 1310, 1607, 1692, 1967, 2275
SspI AATATT 1 cut(s) 870
SspMI CTAG 8 cut(s) 125, 672, 767, 1019, 1058, 1794, 2117, 2147
SstI GAGCTC 1 cut(s) 1448
StuI AGGCCT 2 cut(s) 129, 3018
StyD4I CCNGG 4 cut(s) 523, 1231, 2455, 2743
StyI CCWWGG 5 cut(s) 196, 385, 1290, 1582, 2439
TaaI ACNGT 4 cut(s) 445, 2333, 2655, 2723
TaiI ACGT 1 cut(s) 2499
TaqI TCGA 9 cut(s) 555, 1025, 1470, 1780, 1892, 1987, 2050, 2241, 2732
TatI WGTACW 3 cut(s) 1926, 1975, 2804
TauI GCSGC 1 cut(s) 1312
TfiI GAWTC 9 cut(s) 319, 833, 883, 1022, 1280, 1357, 1894, 2830, 2985
TscAI CASTG 6 cut(s) 154, 592, 808, 2338, 2428, 2956
TseFI GTSAC 4 cut(s) 743, 2333, 2630, 2947
TseI GCWGC 1 cut(s) 2158
Tsp45I GTSAC 4 cut(s) 743, 2333, 2630, 2947
TspGWI ACGGA 2 cut(s) 909, 1912
TspRI CASTG 6 cut(s) 154, 592, 808, 2338, 2428, 2956
Tth111I GACNNNGTC 1 cut(s) 1396
Van91I CCANNNNNTGG 1 cut(s) 98
Vha464I CTTAAG 2 cut(s) 1654, 1802
VpaK11BI GGWCC 4 cut(s) 590, 707, 1184, 1920
XapI RAATTY 5 cut(s) 479, 691, 955, 1411, 2462
XbaI TCTAGA 1 cut(s) 1018
XceI RCATGY 5 cut(s) 1217, 2287, 2638, 2753, 2977
XcmI CCANNNNNNNNNTGG 1 cut(s) 2887
XmiI GTMKAC 2 cut(s) 1645, 2501
XmnI GAANNNNTTC 2 cut(s) 1066, 1284
XspI CTAG 8 cut(s) 125, 672, 767, 1019, 1058, 1794, 2117, 2147
ZrmI AGTACT 2 cut(s) 1977, 2806
Zsp2I ATGCAT 1 cut(s) 1673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.