Rw5G030210
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
47678067 .. 47681940
3874 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G030210.1

Sequence Viewer

Length: 3063 bp
ATGAAATTGGTTTTGATATACTCATTAGTTTTAAATTCCATGTCCATTTTCTGTTGTAGCTCCATGCAATTGAACCATCCGAGACTTAAAGGGAATGAGACGGATAGGCTGGCATTGCTAGCAATCAGAGCTCAAATACAACACGATCCCAACCGGGTCACAAGCTCATGGAATGAAACCCTTCACTTTTGCATGTGGCACGGCGTCACCTGCAGTCGACGACATCATCAAAGGGTGACGAACCTGGAGCTGGGGTCTTTAGCGTTGGTTGGATCCATATCTCCACATATAGGAAATCTAAGCTTCTTAAGAGTGCTAAATCTTGAGAACAATAGCTTCACTCATCAAATCCCTTCTCAAATTGCACATTTGCGTAGATTGCAGGTATTGTCTCTAAACAATAACTCACTTACTGGCACCATTCCTGCCAATTTATCCAATTGCTTCCAACTCATCCGTCTCTATCTTGATCTAAACAATCTGGTCGGTAAAATTCCTCCACAACTCAGTTCCTTGTCAAAGCTTCGGTCTTTTGTTTTGCAAGGCAACAATTTAACAGGAGAGATCCCTCCTTCTTTGGGGAACCTTTCTTCTCTCGAGGAATTTTCTATAGTTGTTAATAACTTAGAAGGAAGCATTCCTACTTCTCTATGTCAGTTGAAAAGACTAACAGGTATCTATTTCGAGTCAAATAGGTTATTTGGTATCATCCCTTCCTGCATTTACAACCTCTCTGGTGTAGTTGTTTTCGATGTTGCCAGAAACCAAATTCAAGGAAATCTTCCATCAAACTTGGGCAATGCGTTTCCCAACCTTCAAATCTTTTCCATTTCCGAAAATCAATTTACAGGGGCCATCCCTAGGTCAATATCCAATGCAACAAATCTTGTGGCGTTTGTATGTTCAGAAACGAAACTCTCTGGACAGGTGCCAAATTTACGAAATCTTCGAAACCTTGTGATTTTCTATGTCGGCGGTAATAATCTTGGAAGCGGTAAACATGGTGACTTGAGTTTTGTCTCAGAATTGATCAATGCCACACAGCTAACTGGATTGGTGTTCGCCGGCAATAATTTCGGAAGGACATTGCCTACATCAATATCCAATCTCTCAACCAATCTCCGAATCCTATTACTTGGAGAAAACAAACTGCATGGAAGCATCCCAATTGGATTAGGCAATCTTATCAACCTGCAATCTCTCCATATGGGAGAAAACTCCTTCACAGCTAGCATTCCCACAGACATTGGGCAGCTTTCAAAGCTTGGGCGGTTGTTTCTTAACAACAACCAATTATCGGGGAGCATCCCATCTTCTCTTGGAAATTTAACAATGTTAACAGCTCTCCGATTGCAAGAAAATAATCTAGAGGGTGGCATCCCATCCAGTCTAGGGAAATGTCACTCCTTACTAGAATTGGGTCTTTCTGGAAACAATTTGAATGGCACGATACCGCCCCAAGTTATTGGCCTCTCATCTTTATCAATAACTTTGGCATTGGATAGAAACCAATTCACTGGTTCCCTTCCTACGGAGATTAGAAAATTGAAGAATCTAGGTGTATTGATGGTTTCTGACAACTTGTTATCAGGAGAACTTCCCAGTAGCCTCGGCAGTTGCGAGAGCTTAGAAGAACTATACCTGCAAGGCAACTTCTTCTTGGGACCCATTCCTTCATCTATGAAGGAATTAAGAGGGATTCGAGATTTAGACCTTTCTCGCAACAATTTGTCAGGAGATATTCCACAATTTCTTGAGAATCTGAACTTGGAGTACCTGAACCTATCCTTCAACCAGTTTTGGGGAGCAGTACCAACTGGCGGTGTTTTTAAGAATGCAAGTGCGACTTCAGTTGTTGGAAATGCTAGACTCTGCGGAGGTATGGCTAGTCTTCGACTTCCTCTGTGCAAGCCTACTGAGTCTAAAGGAGAAGGCCTATCTCGTAGAATGAAATTAATGATCTCTTTGGTCTCCGGGTTCAGCCTTTTGGGACTGGTTGTGGTGCTATCTCTTTTTCTTCTTGGTAAGAAAAGGAAAAAAACTAATTTAACCACTTTGGGGAACTCTGTTTTGCAAGTTTCATATGCTACACTCCTCAGAGCTACTGATGGTTTTTCTTCAGCTAATTTGATTGGTGTGGGTGCTTTTGGGTCTGTGTACAAAGGAATCCTTGCTGATGATAGAGTTGTTGTCGCTGTGAAGGTGCTTAACATGTTACACCGGGGAGCAGCTAAGAGTTTCATGGCCGAATGCGAGGCATTAAGAAATATCAGACATCGAAATTTGGTCAAGATCTTAACTGCATGTTCAAGTATTGATTTTGGTGGCAATGATTTCAAGGCTCTTGTTTACGAGTTCATGGACAACAGGAGCTTGGAAGAGTGGTTGCATCCATCTACTGGAACTGGAGAGGTAACAGAAGCACCCAAAATTTTAAGTCTTATTCAGAGGCTCAACATTGCCATTGATGTTGCTAGTGCATTGGATTATCTTCACAACCATTGTGAAACACCGATCATTCATTGTGATCTCAAGCCAAGTAATGTTCTCTTGGATGGTGACCTGACTGGACATGTTTCGGACTTTGGGCTATCAAGGTTTCTCTCAGAACCAACCAGGAGTGTTTCTGGAAATCAATCAAGCTCCATTGGAATTAGAGGATCGGTTGGTTATGTTGCACCAGAGTATGGTATGGGAAGTGAGGTATCCACATACGGGGATGTCTATAGCTTTGGCATTCTCTTGTTAGAAATGTTTACGGGGAAGCGACCCACTGATCACATGTTCAGTGACAGCTTGAATCTTCATAATTATGTGAAGACAGCTCTCCCTGAACTGGTTTCAGAGAGTTCCAAATCACTAGTTCTTCAAGAAGACACCACTTTTGTTGCTGAAGCTCACAAGCACAGCCGATTGAGTGTGAGAGCACAGAAAATTGAAGAGTGCTTGACTCTGATACTTGGTATAGGGATTGCATGTTCTGTTGAATCCCCCACAAACAGAAAGGATATCCGTGATGTTGCATCTGAATTGCAATCCATTAGGCGCAATCTTCTCAACTAG

Protein Analysis

1020

Amino Acids

110.84

Weight (kDa)

8.6

Isoelectric Point (pI)

35.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 72 6.4e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 78 - 226 2.2e-12 Leucine-rich repeat region
LRR_14 PF23598 373 - 475 8.9e-08 Leucine-rich repeat region
Pkinase PF00069 707 - 940 1.6e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 709 - 931 1e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 218
Acc36I ACCTGC 4 cut(s) 218, 373, 1200, 1650
AccB1I GGYRCC 2 cut(s) 416, 928
AccB7I CCANNNNNTGG 2 cut(s) 2399, 2687
AccI GTMKAC 1 cut(s) 217
AciI CCGC 6 cut(s) 975, 993, 1270, 1454, 1821, 1875
AclWI GGATC 5 cut(s) 140, 267, 280, 559, 2668
AcoI YGGCCR 1 cut(s) 2244
AcsI RAATTY 8 cut(s) 34, 492, 602, 768, 934, 1324, 2281, 2430
AcuI CTGAAG 3 cut(s) 1833, 2103, 2913
AcyI GRCGYC 1 cut(s) 204
AfaI GTAC 3 cut(s) 1775, 1812, 2159
AflII CTTAAG 1 cut(s) 307
AflIII ACRYGT 3 cut(s) 2211, 2572, 2781
AhlI ACTAGT 1 cut(s) 2860
AjnI CCWGG 2 cut(s) 243, 2615
AjuI GAANNNNNNNTTGG 2 cut(s) 1751, 1783
AloI GAACNNNNNNTCC 2 cut(s) 2962, 2994
Alw21I GWGCWC 2 cut(s) 133, 2929
Alw26I GTCTC 6 cut(s) 76, 92, 396, 464, 1024, 1975
AlwI GGATC 5 cut(s) 140, 267, 280, 559, 2668
Ama87I CYCGRG 1 cut(s) 596
AoxI GGCC 4 cut(s) 852, 1468, 1933, 2244
ApeKI GCWGC 2 cut(s) 1252, 2228
ApoI RAATTY 8 cut(s) 34, 492, 602, 768, 934, 1324, 2281, 2430
ArsI GACNNNNNNTTYG 6 cut(s) 512, 544, 998, 1030, 2867, 2899
AseI ATTAAT 1 cut(s) 1955
Asp700I GAANNNNTTC 1 cut(s) 180
AspA2I CCTAGG 1 cut(s) 860
AspLEI GCGC 1 cut(s) 3048
AspS9I GGNCC 2 cut(s) 852, 1664
AsuC2I CCSGG 3 cut(s) 155, 1975, 2222
AsuHPI GGTGA 4 cut(s) 199, 247, 1016, 2570
AsuII TTCGAA 1 cut(s) 949
AsuNHI GCTAGC 2 cut(s) 118, 1229
AvaI CYCGRG 1 cut(s) 596
AvaII GGWCC 1 cut(s) 1664
AvrII CCTAGG 1 cut(s) 860
BamHI GGATCC 1 cut(s) 272
BanI GGYRCC 2 cut(s) 416, 928
BanII GRGCYC 1 cut(s) 133
BarI GAAGNNNNNNTAC 4 cut(s) 625, 657, 697, 729
BbsI GAAGAC 3 cut(s) 1883, 2825, 2880
Bbv12I GWGCWC 2 cut(s) 133, 2929
BbvI GCAGC 2 cut(s) 1264, 2240
BccI CCATC 9 cut(s) 84, 793, 863, 1318, 1390, 1561, 2102, 2401, 2549
BceAI ACGGC 1 cut(s) 217
BcgI CGANNNNNNTGC 2 cut(s) 1057, 1091
BciT130I CCWGG 2 cut(s) 245, 2617
BciVI GTATCC 1 cut(s) 2716
BclI TGATCA 2 cut(s) 1029, 2776
BcnI CCSGG 3 cut(s) 155, 1975, 2222
BcoDI GTCTC 6 cut(s) 76, 92, 396, 464, 1024, 1975
BcuI ACTAGT 1 cut(s) 2860
BfmI CTRYAG 3 cut(s) 211, 609, 2725
BfrI CTTAAG 1 cut(s) 307
BfuAI ACCTGC 4 cut(s) 218, 373, 1200, 1650
BfuI GTATCC 1 cut(s) 2716
BglII AGATCT 1 cut(s) 2292
BisI GCNGC 2 cut(s) 1253, 2229
BlnI CCTAGG 1 cut(s) 860
BlsI GCNGC 2 cut(s) 1254, 2230
Bme1390I CCNGG 5 cut(s) 155, 245, 1975, 2222, 2617
Bme18I GGWCC 1 cut(s) 1664
BmeT110I CYCGRG 1 cut(s) 596
BmgT120I GGNCC 2 cut(s) 852, 1664
BmiI GGNNCC 8 cut(s) 274, 418, 584, 853, 930, 1522, 1665, 1666
BmrFI CCNGG 5 cut(s) 155, 245, 1975, 2222, 2617
BmrI ACTGGG 1 cut(s) 1596
BmsI GCATC 5 cut(s) 1170, 1314, 1386, 2398, 3032
BmtI GCTAGC 2 cut(s) 122, 1233
BmuI ACTGGG 1 cut(s) 1596
BpiI GAAGAC 3 cut(s) 1883, 2825, 2880
BpmI CTGGAG 2 cut(s) 266, 2427
Bpu14I TTCGAA 1 cut(s) 949
BpuEI CTTGAG 4 cut(s) 344, 1030, 1775, 2516
BpuMI CCSGG 3 cut(s) 155, 1975, 2222
BsaBI GATNNNNATC 1 cut(s) 277
BsaHI GRCGYC 1 cut(s) 204
BsaI GGTCTC 1 cut(s) 1975
BsaJI CCNNGG 3 cut(s) 860, 1609, 2221
BsaXI ACNNNNNCTCC 2 cut(s) 239, 269
Bse118I RCCGGY 1 cut(s) 1064
Bse3DI GCAATG 5 cut(s) 113, 805, 1085, 2335, 2457
Bse8I GATNNNNATC 1 cut(s) 277
BseBI CCWGG 2 cut(s) 245, 2617
BseDI CCNNGG 3 cut(s) 860, 1609, 2221
BseJI GATNNNNATC 1 cut(s) 277
BseMI GCAATG 5 cut(s) 113, 805, 1085, 2335, 2457
BseMII CTCAG 5 cut(s) 520, 1035, 1908, 2110, 2619
BseRI GAGGAG 1 cut(s) 2084
BseXI GCAGC 2 cut(s) 1264, 2240
BseYI CCCAGC 1 cut(s) 250
BshFI GGCC 4 cut(s) 854, 1470, 1935, 2246
BshNI GGYRCC 2 cut(s) 416, 928
BsiHKAI GWGCWC 2 cut(s) 133, 2929
BsiHKCI CYCGRG 1 cut(s) 596
BsiSI CCGG 4 cut(s) 154, 1065, 1974, 2221
BslFI GGGAC 2 cut(s) 1677, 2004
BsmAI GTCTC 6 cut(s) 76, 92, 396, 464, 1024, 1975
BsmBI CGTCTC 2 cut(s) 92, 464
BsmFI GGGAC 2 cut(s) 1677, 2004
BsmI GAATGC 5 cut(s) 636, 1233, 1840, 2255, 2736
BsnI GGCC 4 cut(s) 854, 1470, 1935, 2246
Bso31I GGTCTC 1 cut(s) 1975
BsoBI CYCGRG 1 cut(s) 596
Bsp119I TTCGAA 1 cut(s) 949
Bsp1286I GDGCHC 2 cut(s) 133, 2929
Bsp1407I TGTACA 1 cut(s) 2157
BspACI CCGC 6 cut(s) 975, 993, 1270, 1454, 1821, 1875
BspANI GGCC 4 cut(s) 854, 1470, 1935, 2246
BspCNI CTCAG 5 cut(s) 519, 1034, 1909, 2109, 2618
BspLI GGNNCC 8 cut(s) 274, 418, 584, 853, 930, 1522, 1665, 1666
BspMAI CTGCAG 1 cut(s) 215
BspMI ACCTGC 4 cut(s) 218, 373, 1200, 1650
BspOI GCTAGC 2 cut(s) 122, 1233
BspPI GGATC 5 cut(s) 140, 267, 280, 559, 2668
BspT104I TTCGAA 1 cut(s) 949
BspT107I GGYRCC 2 cut(s) 416, 928
BspTI CTTAAG 1 cut(s) 307
BspTNI GGTCTC 1 cut(s) 1975
BsrDI GCAATG 5 cut(s) 113, 805, 1085, 2335, 2457
BsrFI RCCGGY 1 cut(s) 1064
BsrGI TGTACA 1 cut(s) 2157
BssAI RCCGGY 1 cut(s) 1064
BssECI CCNNGG 3 cut(s) 860, 1609, 2221
BssNI GRCGYC 1 cut(s) 204
BssT1I CCWWGG 1 cut(s) 860
Bst2UI CCWGG 2 cut(s) 245, 2617
Bst6I CTCTTC 2 cut(s) 2373, 2934
BstACI GRCGYC 1 cut(s) 204
BstAFI CTTAAG 1 cut(s) 307
BstAUI TGTACA 1 cut(s) 2157
BstBI TTCGAA 1 cut(s) 949
BstC8I GCNNGC 5 cut(s) 111, 120, 1066, 1231, 1910
BstDEI CTNAG 9 cut(s) 299, 506, 625, 1021, 1627, 1917, 2096, 2232, 2605
BstEII GGTNACC 1 cut(s) 2558
BstHHI GCGC 1 cut(s) 3048
BstMAI GTCTC 6 cut(s) 76, 92, 396, 464, 1024, 1975
BstMWI GCNNNNNNNGC 6 cut(s) 115, 119, 128, 210, 379, 1261
BstNI CCWGG 2 cut(s) 245, 2617
BstNSI RCATGY 6 cut(s) 196, 2215, 2307, 2576, 2785, 2979
BstPI GGTNACC 1 cut(s) 2558
BstSCI CCNGG 5 cut(s) 153, 243, 1973, 2220, 2615
BstSFI CTRYAG 3 cut(s) 211, 609, 2725
BstV1I GCAGC 2 cut(s) 1264, 2240
BstV2I GAAGAC 3 cut(s) 1883, 2825, 2880
BstX2I RGATCY 3 cut(s) 272, 564, 2292
BstXI CCANNNNNNTGG 2 cut(s) 1466, 1517
BstYI RGATCY 3 cut(s) 272, 564, 2292
BsuI GTATCC 1 cut(s) 2716
BsuRI GGCC 4 cut(s) 854, 1470, 1935, 2246
BtsIMutI CAGTG 3 cut(s) 1515, 2772, 2794
BveI ACCTGC 4 cut(s) 218, 373, 1200, 1650
Cac8I GCNNGC 5 cut(s) 111, 120, 1066, 1231, 1910
CfoI GCGC 1 cut(s) 3048
Cfr10I RCCGGY 1 cut(s) 1064
Cfr13I GGNCC 2 cut(s) 852, 1664
CseI GACGC 1 cut(s) 193
Csp6I GTAC 3 cut(s) 1774, 1811, 2158
CspCI CAANNNNNGTGG 6 cut(s) 870, 905, 1228, 1263, 2869, 2904
CviQI GTAC 3 cut(s) 1774, 1811, 2158
DdeI CTNAG 9 cut(s) 299, 506, 625, 1021, 1627, 1917, 2096, 2232, 2605
DraI TTTAAA 1 cut(s) 33
EaeI YGGCCR 1 cut(s) 2244
Eam1104I CTCTTC 2 cut(s) 2373, 2934
EarI CTCTTC 2 cut(s) 2373, 2934
Ecl136II GAGCTC 1 cut(s) 131
Eco130I CCWWGG 1 cut(s) 860
Eco147I AGGCCT 1 cut(s) 1935
Eco24I GRGCYC 1 cut(s) 133
Eco31I GGTCTC 1 cut(s) 1975
Eco32I GATATC 1 cut(s) 3010
Eco47I GGWCC 1 cut(s) 1664
Eco53kI GAGCTC 1 cut(s) 131
Eco57I CTGAAG 3 cut(s) 1833, 2103, 2913
Eco88I CYCGRG 1 cut(s) 596
Eco91I GGTNACC 1 cut(s) 2558
EcoICRI GAGCTC 1 cut(s) 131
EcoO109I RGGNCCY 1 cut(s) 1664
EcoO65I GGTNACC 1 cut(s) 2558
EcoRII CCWGG 2 cut(s) 243, 2615
EcoRV GATATC 1 cut(s) 3010
EcoT14I CCWWGG 1 cut(s) 860
EcoT38I GRGCYC 1 cut(s) 133
ErhI CCWWGG 1 cut(s) 860
Esp3I CGTCTC 2 cut(s) 92, 464
FalI AAGNNNNNCTT 6 cut(s) 765, 797, 1831, 1863, 2154, 2186
FaqI GGGAC 2 cut(s) 1677, 2004
FauNDI CATATG 2 cut(s) 1206, 2083
FbaI TGATCA 2 cut(s) 1029, 2776
FblI GTMKAC 1 cut(s) 217
Fnu4HI GCNGC 2 cut(s) 1253, 2229
FriOI GRGCYC 1 cut(s) 133
Fsp4HI GCNGC 2 cut(s) 1253, 2229
GlaI GCGC 1 cut(s) 3047
GluI GCNGC 2 cut(s) 1253, 2229
GsaI CCCAGC 1 cut(s) 254
GsuI CTGGAG 2 cut(s) 266, 2427
HaeIII GGCC 4 cut(s) 854, 1470, 1935, 2246
HapII CCGG 4 cut(s) 154, 1065, 1974, 2221
HgaI GACGC 1 cut(s) 193
HhaI GCGC 1 cut(s) 3048
Hin1I GRCGYC 1 cut(s) 204
Hin6I GCGC 1 cut(s) 3046
HinP1I GCGC 1 cut(s) 3046
HincII GTYRAC 2 cut(s) 218, 1338
HindII GTYRAC 2 cut(s) 218, 1338
HindIII AAGCTT 3 cut(s) 301, 521, 1262
HpaI GTTAAC 1 cut(s) 1338
HpaII CCGG 4 cut(s) 154, 1065, 1974, 2221
HphI GGTGA 4 cut(s) 199, 247, 1016, 2570
Hpy166II GTNNAC 6 cut(s) 218, 998, 1338, 2158, 2350, 2757
Hpy8I GTNNAC 6 cut(s) 218, 998, 1338, 2158, 2350, 2757
Hpy99I CGWCG 1 cut(s) 222
HpyF10VI GCNNNNNNNGC 6 cut(s) 115, 119, 128, 210, 379, 1261
HpyF3I CTNAG 9 cut(s) 299, 506, 625, 1021, 1627, 1917, 2096, 2232, 2605
Hsp92I GRCGYC 1 cut(s) 204
HspAI GCGC 1 cut(s) 3046
KflI GGGWCCC 1 cut(s) 1664
KroI GCCGGC 1 cut(s) 1064
KroNI GCCGGC 1 cut(s) 1066
Ksp22I TGATCA 2 cut(s) 1029, 2776
KspAI GTTAAC 1 cut(s) 1338
LmnI GCTCC 7 cut(s) 65, 247, 1302, 1805, 2225, 2370, 2648
Lsp1109I GCAGC 2 cut(s) 1264, 2240
LweI GCATC 5 cut(s) 1170, 1314, 1386, 2398, 3032
MaeIII GTNAC 9 cut(s) 157, 205, 235, 1004, 1400, 2214, 2413, 2558, 2789
MfeI CAATTG 3 cut(s) 68, 439, 1167
MflI RGATCY 3 cut(s) 272, 564, 2292
MhlI GDGCHC 2 cut(s) 133, 2929
MlyI GAGTC 4 cut(s) 695, 1863, 1928, 2944
MmeI TCCRAC 3 cut(s) 250, 472, 1837
MroNI GCCGGC 1 cut(s) 1064
MroXI GAANNNNTTC 1 cut(s) 180
MslI CAYNNNNRTG 1 cut(s) 2811
MspCI CTTAAG 1 cut(s) 307
MspI CCGG 4 cut(s) 154, 1065, 1974, 2221
MspR9I CCNGG 5 cut(s) 155, 245, 1975, 2222, 2617
MunI CAATTG 3 cut(s) 68, 439, 1167
Mva1269I GAATGC 5 cut(s) 636, 1233, 1840, 2255, 2736
MvaI CCWGG 2 cut(s) 245, 2617
MwoI GCNNNNNNNGC 6 cut(s) 115, 119, 128, 210, 379, 1261
NaeI GCCGGC 1 cut(s) 1066
NciI CCSGG 3 cut(s) 155, 1975, 2222
NdeI CATATG 2 cut(s) 1206, 2083
NgoMIV GCCGGC 1 cut(s) 1064
NheI GCTAGC 2 cut(s) 118, 1229
NlaIV GGNNCC 8 cut(s) 274, 418, 584, 853, 930, 1522, 1665, 1666
NmeAIII GCCGAG 1 cut(s) 1590
NmuCI GTSAC 7 cut(s) 157, 205, 235, 1004, 1400, 2558, 2789
NspI RCATGY 6 cut(s) 196, 2215, 2307, 2576, 2785, 2979
NspV TTCGAA 1 cut(s) 949
PaeR7I CTCGAG 1 cut(s) 596
PaqCI CACCTGC 1 cut(s) 218
PceI AGGCCT 1 cut(s) 1935
PciI ACATGT 3 cut(s) 2211, 2572, 2781
PcsI WCGNNNNNNNCGW 2 cut(s) 946, 1617
PctI GAATGC 5 cut(s) 636, 1233, 1840, 2255, 2736
PdiI GCCGGC 1 cut(s) 1066
PdmI GAANNNNTTC 1 cut(s) 180
PfeI GAWTC 7 cut(s) 1125, 1552, 1699, 1759, 2166, 2800, 2987
PflMI CCANNNNNTGG 2 cut(s) 2399, 2687
PkrI GCNGC 2 cut(s) 1254, 2230
PleI GAGTC 4 cut(s) 694, 1863, 1927, 2944
PpsI GAGTC 4 cut(s) 694, 1863, 1927, 2944
PpuMI RGGWCCY 1 cut(s) 1664
PscI ACATGT 3 cut(s) 2211, 2572, 2781
PshBI ATTAAT 1 cut(s) 1955
Psp124BI GAGCTC 1 cut(s) 133
Psp5II RGGWCCY 1 cut(s) 1664
Psp6I CCWGG 2 cut(s) 243, 2615
PspEI GGTNACC 1 cut(s) 2558
PspFI CCCAGC 1 cut(s) 250
PspGI CCWGG 2 cut(s) 243, 2615
PspN4I GGNNCC 8 cut(s) 274, 418, 584, 853, 930, 1522, 1665, 1666
PspPI GGNCC 2 cut(s) 852, 1664
PspPPI RGGWCCY 1 cut(s) 1664
PsrI GAACNNNNNNTAC 2 cut(s) 1757, 1789
PstI CTGCAG 1 cut(s) 215
PsuI RGATCY 3 cut(s) 272, 564, 2292
RsaI GTAC 3 cut(s) 1775, 1812, 2159
RsaNI GTAC 3 cut(s) 1774, 1811, 2158
RseI CAYNNNNRTG 1 cut(s) 2811
SacI GAGCTC 1 cut(s) 133
SalI GTCGAC 1 cut(s) 216
SatI GCNGC 2 cut(s) 1253, 2229
Sau96I GGNCC 2 cut(s) 852, 1664
SchI GAGTC 4 cut(s) 695, 1863, 1928, 2944
ScrFI CCNGG 5 cut(s) 155, 245, 1975, 2222, 2617
SduI GDGCHC 2 cut(s) 133, 2929
SfaNI GCATC 5 cut(s) 1170, 1314, 1386, 2398, 3032
SfcI CTRYAG 3 cut(s) 211, 609, 2725
Sfr274I CTCGAG 1 cut(s) 596
SfuI TTCGAA 1 cut(s) 949
SinI GGWCC 1 cut(s) 1664
SlaI CTCGAG 1 cut(s) 596
SmiMI CAYNNNNRTG 1 cut(s) 2811
SmlI CTYRAG 6 cut(s) 307, 323, 596, 1009, 1754, 2531
SmoI CTYRAG 6 cut(s) 307, 323, 596, 1009, 1754, 2531
SpeI ACTAGT 1 cut(s) 2860
SseBI AGGCCT 1 cut(s) 1935
SsiI CCGC 6 cut(s) 975, 993, 1270, 1454, 1821, 1875
SstI GAGCTC 1 cut(s) 133
StuI AGGCCT 1 cut(s) 1935
StyD4I CCNGG 5 cut(s) 153, 243, 1973, 2220, 2615
StyI CCWWGG 1 cut(s) 860
TaqI TCGA 8 cut(s) 217, 597, 684, 750, 949, 1702, 1894, 2278
TaqII GACCGA 1 cut(s) 516
TatI WGTACW 1 cut(s) 2157
TfiI GAWTC 7 cut(s) 1125, 1552, 1699, 1759, 2166, 2800, 2987
TscAI CASTG 3 cut(s) 1522, 2779, 2794
TseFI GTSAC 7 cut(s) 157, 205, 235, 1004, 1400, 2558, 2789
TseI GCWGC 2 cut(s) 1252, 2228
Tsp45I GTSAC 7 cut(s) 157, 205, 235, 1004, 1400, 2558, 2789
TspGWI ACGGA 4 cut(s) 116, 446, 1547, 3002
TspRI CASTG 3 cut(s) 1522, 2779, 2794
Van91I CCANNNNNTGG 2 cut(s) 2399, 2687
Vha464I CTTAAG 1 cut(s) 307
VpaK11BI GGWCC 1 cut(s) 1664
VspI ATTAAT 1 cut(s) 1955
XapI RAATTY 8 cut(s) 34, 492, 602, 768, 934, 1324, 2281, 2430
XbaI TCTAGA 1 cut(s) 1366
XceI RCATGY 6 cut(s) 196, 2215, 2307, 2576, 2785, 2979
XhoI CTCGAG 1 cut(s) 596
XmaJI CCTAGG 1 cut(s) 860
XmiI GTMKAC 1 cut(s) 217
XmnI GAANNNNTTC 1 cut(s) 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.