MD01G1151800.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
25977662 .. 25981001
3340 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1151800.v1.1.491

Sequence Viewer

Length: 2100 bp
ATGCAACTGTTTCTCTTGATGTCTTTACTTGCATTTAAAGCTGAAATCGTGAACGATCCACTGGGCATTCTTAGCTCCTGGAATGAATCCCTCCACTTCTGTCAGTGGCAAGGTATTGTTTGTGGCCGTAGGCACCGGAGAGTCACCGTGCTGGATCTCCAATCAAGCCGGCTGTACGGTCAGCTATCTCCCCACATTGGAAACTTGAGCTTTCTCAGAAATTTAAACCTCCAAAACAACAGCTTCAACAACACCATCCCTCAAGAAATTGGTCGTTTGTTCCGTCTGCAACAACTACGCCTTGATAACAACTCCTTCAGTGGTGATATTCCATTCAACATATCACGTTGCTCTAACCTCCAAATACTTCGCATAAATGGAAACCATCTTAGGGGTAAAATTCCAATTGAAATTGGCTCCTTGTCCAAGCTTCAGGTACTTGTTTTAAGAAAAAACAATTTAAGTGGGGAAATCCCACCTTCTTTTGGAAATCTTTCTTCTCCCCAGGCACTAGATGTGGAAGAAATTAATCTGCATGGAGGCATTCCGAATAGCCTTGGCCAGTTGAAAAGTCTAACATATCTTGCATTGGGTCAAAATTATTTGAATGGTACCATCCCTCCCTCCATATACAACCTCTCATCAATTACAGTCATTTCTGTGGTTCTAAACGAACTGCATGGAACTCTTCCTCCTGGGTTGGGCCACACTATATTTCCAAACCTCCAAGAATTTTATTTTTGGTCCAACAAATTCAGTGGACCGATACCGAATTCAATCTCCAATGCCTCAAGCCTTTCACTTTTTTTAATCTTATTCAATGAGTTTACAGGAAAAGTGCCTAGTCTAGCACGCCTGTCAAATTTGTATGTGTTAACACTTGCCCATAACAATCTTGGAAATGATGAGGAAGGTGACTTGGATTTCATATCTTCTCTAGTTAATGCCACCAAATTAACAATCTTTGATTTTAGTGTCAATAATTTTGGAGGAGTACTACCTGAATCCATCAGCAATCTCTCAACAAAGCTCATGCAAATGGTATTTGGTCATAACCAGATTCGCGGAAGAATTCCCATAGGAATCGGAAATCTAATCAACCTAGAGGCAGTAGGCTCTGAGGCAAACCTATTGACAGGCACAATACCAAGTTCTATTGGTAAATTGAAAAGGCTGGATGCTTTGTATCTGAACGAGAATAAACTATCAGGTATCATCCCATCTTCTCTTGGAAATCTAACTTCAATGACCAGGTTGCTTCTCATGTCAAACAAGTTAGAAGGCAACATACCGCAAAGTCTCGGAGAATGCAGGAATCTTCTTCTTTTAGCTCTTTCCCAAAATAATCTCCGCGGTCAAATTCCTAAAGAAGTTATTGGTTTAGCATCTCTTACTGGATCCCTACCAATGGAGATAAGCAACTTGATGCATCTAGATTTCTTGGATGTTTCTCACAATCGGTTATCTGGTGAGATTCCACGAAGCTTAGGGACTTGTACAAGTTTGACAACTCTGAATCTGAGTGAAAACTCATTGCAGGGGACCATTCCTGAATCCTTGAGCTCTTTGAGAGGGATTGAGGATTTCGACCTCTCTCGCAACAACTTGTCTGGCATAATTCCCAACTATTTGGAGATTTTCGAGAATATAAGTGCACTTTCTGTCACGGGAAACTCACGAATTTGTGGAGGTATACCTTCTTTAAGATTGCCCAAATGCGTCTCCAAGCATTCTAAGCAAGGCTTATCTTCTAGGCCGAAAATAATTATCTCAGCTGCTTGTGGGGTTGTTGGATTGAGTTTTGCAATTTTGTTTGTGATTCTTTACCGATCAAGAAAAACAAGACCACTGAAGTCAACATCAGGATCATCATTGGGGGTTTCACTTTTGAAGTTGTCCTACAGAGATCTCCTTAAAGCAACTGACGGGTTCTCTGCAGCTAATTTGATTGGTGCTGGTAGTTTTGGGTCTGTATATAAGGGAATACTCGATCAGTATGAAGGAAGAGTTGTTGCAGTGAAAGTACTCAATCTTCGAAAGTACTCAATCTTCAAAGTGCAAGAGCTTCCAAAAGTTTCACTGCTGAATGTGAAGCTCTGA

Protein Analysis

700

Amino Acids

76.29

Weight (kDa)

9.45

Isoelectric Point (pI)

40.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 8 - 41 2e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 47 - 149 9e-11 Leucine-rich repeat region
LRR_14 PF23598 133 - 312 2e-08 Leucine-rich repeat region
LRR_14 PF23598 358 - 447 5.5e-06 Leucine-rich repeat region
LRR_8 PF13855 375 - 426 9.5e-06 Leucine rich repeat
LRR_8 PF13855 501 - 558 1.3e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 611
AccB1I GGYRCC 2 cut(s) 132, 611
AccI GTMKAC 1 cut(s) 1693
AccII CGCG 2 cut(s) 1065, 1353
AciI CCGC 4 cut(s) 1065, 1292, 1351, 1353
AclWI GGATC 5 cut(s) 50, 162, 1392, 1405, 1873
AcoI YGGCCR 2 cut(s) 124, 559
AcsI RAATTY 9 cut(s) 220, 399, 731, 752, 772, 862, 1071, 1359, 1680
AcuI CTGAAG 3 cut(s) 301, 416, 1871
AfaI GTAC 7 cut(s) 176, 438, 613, 996, 1498, 2025, 2042
AfiI CCNNNNNNNGG 5 cut(s) 197, 391, 485, 701, 1408
AjnI CCWGG 4 cut(s) 77, 504, 694, 1250
AloI GAACNNNNNNTCC 2 cut(s) 676, 708
Alw21I GWGCWC 2 cut(s) 1565, 1657
Alw26I GTCTC 2 cut(s) 1304, 1726
Alw44I GTGCAC 1 cut(s) 1653
AlwI GGATC 5 cut(s) 50, 162, 1392, 1405, 1873
AoxI GGCC 4 cut(s) 124, 559, 703, 1754
ApaLI GTGCAC 1 cut(s) 1653
ApeKI GCWGC 2 cut(s) 1775, 1937
ApoI RAATTY 9 cut(s) 220, 399, 731, 752, 772, 862, 1071, 1359, 1680
AseI ATTAAT 1 cut(s) 528
Asp700I GAANNNNTTC 1 cut(s) 493
Asp718I GGTACC 1 cut(s) 611
AspS9I GGNCC 4 cut(s) 703, 744, 761, 1542
AsuHPI GGTGA 4 cut(s) 136, 335, 926, 1481
AsuII TTCGAA 1 cut(s) 2035
AvaII GGWCC 3 cut(s) 744, 761, 1542
BaeGI GKGCMC 1 cut(s) 1657
BalI TGGCCA 1 cut(s) 561
BamHI GGATCC 1 cut(s) 1397
BanI GGYRCC 2 cut(s) 132, 611
BanII GRGCYC 1 cut(s) 1565
BarI GAAGNNNNNNTAC 8 cut(s) 1272, 1304, 1883, 1915, 2016, 2033, 2048, 2065
Bbv12I GWGCWC 2 cut(s) 1565, 1657
BbvI GCAGC 2 cut(s) 1762, 1949
BccI CCATC 5 cut(s) 263, 393, 623, 1016, 1228
BceAI ACGGC 1 cut(s) 111
BciT130I CCWGG 4 cut(s) 79, 506, 696, 1252
BcoDI GTCTC 2 cut(s) 1304, 1726
BfaI CTAG 7 cut(s) 512, 843, 848, 938, 1103, 1433, 1752
BfmI CTRYAG 2 cut(s) 1900, 1935
BglII AGATCT 1 cut(s) 1906
BisI GCNGC 2 cut(s) 1776, 1938
BlsI GCNGC 2 cut(s) 1777, 1939
BmcAI AGTACT 3 cut(s) 996, 2025, 2042
Bme1390I CCNGG 4 cut(s) 79, 506, 696, 1252
Bme18I GGWCC 3 cut(s) 744, 761, 1542
BmgT120I GGNCC 4 cut(s) 703, 744, 761, 1542
BmiI GGNNCC 5 cut(s) 134, 418, 613, 1399, 1543
BmrFI CCNGG 4 cut(s) 79, 506, 696, 1252
BmrI ACTGGG 1 cut(s) 71
BmsI GCATC 4 cut(s) 1168, 1394, 1416, 1438
BmuI ACTGGG 1 cut(s) 71
Bpu10I CCTNAGC 1 cut(s) 1486
Bpu14I TTCGAA 1 cut(s) 2035
BpuEI CTTGAG 4 cut(s) 226, 246, 775, 1579
BsaJI CCNNGG 4 cut(s) 504, 556, 695, 1351
BsaWI WCCGGW 1 cut(s) 135
BsaXI ACNNNNNCTCC 4 cut(s) 604, 634, 676, 706
Bsc4I CCNNNNNNNGG 5 cut(s) 197, 391, 485, 701, 1408
Bse118I RCCGGY 1 cut(s) 168
Bse1I ACTGG 3 cut(s) 66, 562, 1399
Bse3DI GCAATG 1 cut(s) 1532
BseBI CCWGG 4 cut(s) 79, 506, 696, 1252
BseDI CCNNGG 4 cut(s) 504, 556, 695, 1351
BseGI GGATG 5 cut(s) 255, 615, 1183, 1215, 1450
BseLI CCNNNNNNNGG 5 cut(s) 197, 391, 485, 701, 1408
BseMI GCAATG 1 cut(s) 1532
BseMII CTCAG 4 cut(s) 229, 1110, 1511, 1785
BseNI ACTGG 3 cut(s) 66, 562, 1399
BseRI GAGGAG 1 cut(s) 1005
BseSI GKGCMC 1 cut(s) 1657
BseXI GCAGC 2 cut(s) 1762, 1949
Bsh1236I CGCG 2 cut(s) 1065, 1353
BshFI GGCC 4 cut(s) 126, 561, 705, 1756
BshNI GGYRCC 2 cut(s) 132, 611
BsiHKAI GWGCWC 2 cut(s) 1565, 1657
BsiSI CCGG 2 cut(s) 136, 169
BslFI GGGAC 2 cut(s) 1504, 1555
BslI CCNNNNNNNGG 5 cut(s) 197, 391, 485, 701, 1408
BsmAI GTCTC 2 cut(s) 1304, 1726
BsmBI CGTCTC 1 cut(s) 1726
BsmFI GGGAC 2 cut(s) 1504, 1555
BsmI GAATGC 4 cut(s) 66, 543, 1313, 1729
BsnI GGCC 4 cut(s) 126, 561, 705, 1756
Bsp119I TTCGAA 1 cut(s) 2035
Bsp1286I GDGCHC 2 cut(s) 1565, 1657
Bsp1407I TGTACA 1 cut(s) 1496
Bsp143I GATC 7 cut(s) 55, 154, 1397, 1829, 1865, 1906, 1990
BspACI CCGC 4 cut(s) 1065, 1292, 1351, 1353
BspANI GGCC 4 cut(s) 126, 561, 705, 1756
BspCNI CTCAG 4 cut(s) 228, 1111, 1512, 1784
BspFNI CGCG 2 cut(s) 1065, 1353
BspLI GGNNCC 5 cut(s) 134, 418, 613, 1399, 1543
BspMAI CTGCAG 1 cut(s) 1939
BspPI GGATC 5 cut(s) 50, 162, 1392, 1405, 1873
BspT104I TTCGAA 1 cut(s) 2035
BspT107I GGYRCC 2 cut(s) 132, 611
BsrDI GCAATG 1 cut(s) 1532
BsrFI RCCGGY 1 cut(s) 168
BsrGI TGTACA 1 cut(s) 1496
BsrI ACTGG 3 cut(s) 66, 562, 1399
BssAI RCCGGY 1 cut(s) 168
BssECI CCNNGG 4 cut(s) 504, 556, 695, 1351
BssMI GATC 7 cut(s) 55, 154, 1397, 1829, 1865, 1906, 1990
BssNAI GTATAC 1 cut(s) 1694
BssT1I CCWWGG 1 cut(s) 556
Bst1107I GTATAC 1 cut(s) 1694
Bst2UI CCWGG 4 cut(s) 79, 506, 696, 1252
Bst4CI ACNGT 4 cut(s) 9, 148, 179, 652
Bst6I CTCTTC 2 cut(s) 693, 1999
BstAUI TGTACA 1 cut(s) 1496
BstBI TTCGAA 1 cut(s) 2035
BstC8I GCNNGC 2 cut(s) 170, 853
BstDEI CTNAG 8 cut(s) 71, 215, 389, 1119, 1486, 1520, 1734, 1771
BstDSI CCRYGG 1 cut(s) 1351
BstF5I GGATG 5 cut(s) 255, 615, 1183, 1215, 1450
BstFNI CGCG 2 cut(s) 1065, 1353
BstKTI GATC 7 cut(s) 58, 157, 1400, 1832, 1868, 1909, 1993
BstMAI GTCTC 2 cut(s) 1304, 1726
BstMBI GATC 7 cut(s) 55, 154, 1397, 1829, 1865, 1906, 1990
BstMWI GCNNNNNNNGC 3 cut(s) 38, 72, 1735
BstNI CCWGG 4 cut(s) 79, 506, 696, 1252
BstSCI CCNGG 4 cut(s) 77, 504, 694, 1250
BstSFI CTRYAG 2 cut(s) 1900, 1935
BstSLI GKGCMC 1 cut(s) 1657
BstUI CGCG 2 cut(s) 1065, 1353
BstV1I GCAGC 2 cut(s) 1762, 1949
BstX2I RGATCY 3 cut(s) 154, 1397, 1906
BstXI CCANNNNNNTGG 1 cut(s) 1630
BstYI RGATCY 3 cut(s) 154, 1397, 1906
BstZ17I GTATAC 1 cut(s) 1694
BsuRI GGCC 4 cut(s) 126, 561, 705, 1756
BtgI CCRYGG 1 cut(s) 1351
BtsCI GGATG 5 cut(s) 255, 615, 1183, 1215, 1450
BtsI GCAGTG 2 cut(s) 2022, 2078
BtsIMutI CAGTG 7 cut(s) 59, 110, 325, 763, 1847, 2022, 2078
Cac8I GCNNGC 2 cut(s) 170, 853
Cfr10I RCCGGY 1 cut(s) 168
Cfr13I GGNCC 4 cut(s) 703, 744, 761, 1542
Cfr42I CCGCGG 1 cut(s) 1354
CseI GACGC 1 cut(s) 1708
CsiI ACCWGGT 1 cut(s) 1250
Csp6I GTAC 7 cut(s) 175, 437, 612, 995, 1497, 2024, 2041
CspCI CAANNNNNGTGG 4 cut(s) 445, 480, 739, 774
CviAII CATG 4 cut(s) 536, 680, 1033, 1264
CviQI GTAC 7 cut(s) 175, 437, 612, 995, 1497, 2024, 2041
DdeI CTNAG 8 cut(s) 71, 215, 389, 1119, 1486, 1520, 1734, 1771
DpnI GATC 7 cut(s) 57, 156, 1399, 1831, 1867, 1908, 1992
DpnII GATC 7 cut(s) 55, 154, 1397, 1829, 1865, 1906, 1990
DraI TTTAAA 2 cut(s) 37, 225
EaeI YGGCCR 2 cut(s) 124, 559
Eam1104I CTCTTC 2 cut(s) 693, 1999
EarI CTCTTC 2 cut(s) 693, 1999
Ecl136II GAGCTC 1 cut(s) 1563
Eco130I CCWWGG 1 cut(s) 556
Eco24I GRGCYC 1 cut(s) 1565
Eco47I GGWCC 3 cut(s) 744, 761, 1542
Eco53kI GAGCTC 1 cut(s) 1563
Eco57I CTGAAG 3 cut(s) 301, 416, 1871
EcoICRI GAGCTC 1 cut(s) 1563
EcoRI GAATTC 2 cut(s) 772, 1071
EcoRII CCWGG 4 cut(s) 77, 504, 694, 1250
EcoT14I CCWWGG 1 cut(s) 556
EcoT22I ATGCAT 1 cut(s) 1431
EcoT38I GRGCYC 1 cut(s) 1565
ErhI CCWWGG 1 cut(s) 556
Esp3I CGTCTC 1 cut(s) 1726
FaeI CATG 4 cut(s) 539, 683, 1036, 1267
FalI AAGNNNNNCTT 2 cut(s) 1727, 1759
FaqI GGGAC 2 cut(s) 1504, 1555
FatI CATG 4 cut(s) 535, 679, 1032, 1263
FblI GTMKAC 1 cut(s) 1693
Fnu4HI GCNGC 2 cut(s) 1776, 1938
FokI GGATG 5 cut(s) 242, 602, 1190, 1202, 1457
FriOI GRGCYC 1 cut(s) 1565
Fsp4HI GCNGC 2 cut(s) 1776, 1938
FspBI CTAG 7 cut(s) 512, 843, 848, 938, 1103, 1433, 1752
GluI GCNGC 2 cut(s) 1776, 1938
HaeIII GGCC 4 cut(s) 126, 561, 705, 1756
HapII CCGG 2 cut(s) 136, 169
HgaI GACGC 1 cut(s) 1708
Hin1II CATG 4 cut(s) 539, 683, 1036, 1267
HincII GTYRAC 2 cut(s) 876, 1857
HindII GTYRAC 2 cut(s) 876, 1857
HindIII AAGCTT 2 cut(s) 428, 1483
HpaI GTTAAC 1 cut(s) 876
HpaII CCGG 2 cut(s) 136, 169
HphI GGTGA 4 cut(s) 136, 335, 926, 1481
Hpy166II GTNNAC 7 cut(s) 52, 761, 828, 876, 1655, 1694, 1857
Hpy188I TCNGA 9 cut(s) 218, 549, 1088, 1120, 1191, 1304, 1515, 1521, 2099
Hpy188III TCNNGA 9 cut(s) 16, 49, 263, 1433, 1550, 1642, 1677, 1833, 1863
Hpy8I GTNNAC 7 cut(s) 52, 761, 828, 876, 1655, 1694, 1857
HpyAV CCTTC 6 cut(s) 325, 489, 905, 1274, 1707, 1994
HpyCH4III ACNGT 4 cut(s) 9, 148, 179, 652
HpyCH4IV ACGT 1 cut(s) 346
HpyF10VI GCNNNNNNNGC 3 cut(s) 38, 72, 1735
HpyF3I CTNAG 8 cut(s) 71, 215, 389, 1119, 1486, 1520, 1734, 1771
HpySE526I ACGT 1 cut(s) 346
Hsp92II CATG 4 cut(s) 539, 683, 1036, 1267
KpnI GGTACC 1 cut(s) 615
KroI GCCGGC 1 cut(s) 168
KroNI GCCGGC 1 cut(s) 170
KspAI GTTAAC 1 cut(s) 876
KspI CCGCGG 1 cut(s) 1354
Kzo9I GATC 7 cut(s) 55, 154, 1397, 1829, 1865, 1906, 1990
LmnI GCTCC 2 cut(s) 80, 422
Lsp1109I GCAGC 2 cut(s) 1762, 1949
LweI GCATC 4 cut(s) 1168, 1394, 1416, 1438
MabI ACCWGGT 1 cut(s) 1250
MaeI CTAG 7 cut(s) 512, 843, 848, 938, 1103, 1433, 1752
MaeII ACGT 1 cut(s) 346
MaeIII GTNAC 3 cut(s) 142, 914, 1663
MalI GATC 7 cut(s) 57, 156, 1399, 1831, 1867, 1908, 1992
MboI GATC 7 cut(s) 55, 154, 1397, 1829, 1865, 1906, 1990
MfeI CAATTG 1 cut(s) 405
MflI RGATCY 3 cut(s) 154, 1397, 1906
MhlI GDGCHC 2 cut(s) 1565, 1657
MlsI TGGCCA 1 cut(s) 561
MluNI TGGCCA 1 cut(s) 561
MlyI GAGTC 1 cut(s) 150
MmeI TCCRAC 2 cut(s) 771, 1771
Mox20I TGGCCA 1 cut(s) 561
Mph1103I ATGCAT 1 cut(s) 1431
MroNI GCCGGC 1 cut(s) 168
MroXI GAANNNNTTC 1 cut(s) 493
MscI TGGCCA 1 cut(s) 561
MslI CAYNNNNRTG 2 cut(s) 659, 1037
Msp20I TGGCCA 1 cut(s) 561
MspA1I CMGCKG 2 cut(s) 1353, 1775
MspI CCGG 2 cut(s) 136, 169
MspR9I CCNGG 4 cut(s) 79, 506, 696, 1252
MunI CAATTG 1 cut(s) 405
Mva1269I GAATGC 4 cut(s) 66, 543, 1313, 1729
MvaI CCWGG 4 cut(s) 79, 506, 696, 1252
MvnI CGCG 2 cut(s) 1065, 1353
MwoI GCNNNNNNNGC 3 cut(s) 38, 72, 1735
NaeI GCCGGC 1 cut(s) 170
NdeII GATC 7 cut(s) 55, 154, 1397, 1829, 1865, 1906, 1990
NgoMIV GCCGGC 1 cut(s) 168
NlaIII CATG 4 cut(s) 539, 683, 1036, 1267
NlaIV GGNNCC 5 cut(s) 134, 418, 613, 1399, 1543
NmuCI GTSAC 3 cut(s) 142, 914, 1663
NsiI ATGCAT 1 cut(s) 1431
NspV TTCGAA 1 cut(s) 2035
PcsI WCGNNNNNNNCGW 1 cut(s) 280
PctI GAATGC 4 cut(s) 66, 543, 1313, 1729
PdiI GCCGGC 1 cut(s) 170
PdmI GAANNNNTTC 1 cut(s) 493
PfeI GAWTC 9 cut(s) 86, 1004, 1060, 1083, 1315, 1474, 1516, 1553, 1819
PfoI TCCNGGA 1 cut(s) 77
PkrI GCNGC 2 cut(s) 1777, 1939
PleI GAGTC 1 cut(s) 149
PpsI GAGTC 1 cut(s) 149
PshBI ATTAAT 1 cut(s) 528
Psp124BI GAGCTC 1 cut(s) 1565
Psp6I CCWGG 4 cut(s) 77, 504, 694, 1250
PspGI CCWGG 4 cut(s) 77, 504, 694, 1250
PspN4I GGNNCC 5 cut(s) 134, 418, 613, 1399, 1543
PspPI GGNCC 4 cut(s) 703, 744, 761, 1542
PstI CTGCAG 1 cut(s) 1939
PsuI RGATCY 3 cut(s) 154, 1397, 1906
PvuII CAGCTG 1 cut(s) 1775
RsaI GTAC 7 cut(s) 176, 438, 613, 996, 1498, 2025, 2042
RsaNI GTAC 7 cut(s) 175, 437, 612, 995, 1497, 2024, 2041
RseI CAYNNNNRTG 2 cut(s) 659, 1037
SacI GAGCTC 1 cut(s) 1565
SacII CCGCGG 1 cut(s) 1354
SatI GCNGC 2 cut(s) 1776, 1938
Sau3AI GATC 7 cut(s) 55, 154, 1397, 1829, 1865, 1906, 1990
Sau96I GGNCC 4 cut(s) 703, 744, 761, 1542
ScaI AGTACT 3 cut(s) 996, 2025, 2042
SchI GAGTC 1 cut(s) 150
ScrFI CCNGG 4 cut(s) 79, 506, 696, 1252
SduI GDGCHC 2 cut(s) 1565, 1657
SexAI ACCWGGT 1 cut(s) 1250
SfaNI GCATC 4 cut(s) 1168, 1394, 1416, 1438
SfcI CTRYAG 2 cut(s) 1900, 1935
Sfr303I CCGCGG 1 cut(s) 1354
SfuI TTCGAA 1 cut(s) 2035
SgrBI CCGCGG 1 cut(s) 1354
SinI GGWCC 3 cut(s) 744, 761, 1542
SmiMI CAYNNNNRTG 2 cut(s) 659, 1037
SmlI CTYRAG 4 cut(s) 205, 261, 790, 1558
SmoI CTYRAG 4 cut(s) 205, 261, 790, 1558
SsiI CCGC 4 cut(s) 1065, 1292, 1351, 1353
SspMI CTAG 7 cut(s) 512, 843, 848, 938, 1103, 1433, 1752
SstI GAGCTC 1 cut(s) 1565
StyD4I CCNGG 4 cut(s) 77, 504, 694, 1250
StyI CCWWGG 1 cut(s) 556
TaaI ACNGT 4 cut(s) 9, 148, 179, 652
TaiI ACGT 1 cut(s) 349
TaqI TCGA 4 cut(s) 1587, 1641, 1989, 2035
TaqII GACCGA 1 cut(s) 778
TatI WGTACW 4 cut(s) 994, 1496, 2023, 2040
TfiI GAWTC 9 cut(s) 86, 1004, 1060, 1083, 1315, 1474, 1516, 1553, 1819
TscAI CASTG 7 cut(s) 66, 110, 325, 763, 1854, 2022, 2085
TseFI GTSAC 3 cut(s) 142, 914, 1663
TseI GCWGC 2 cut(s) 1775, 1937
Tsp45I GTSAC 3 cut(s) 142, 914, 1663
TspDTI ATGAA 3 cut(s) 99, 916, 2013
TspGWI ACGGA 1 cut(s) 272
TspRI CASTG 7 cut(s) 66, 110, 325, 763, 1854, 2022, 2085
VneI GTGCAC 1 cut(s) 1653
VpaK11BI GGWCC 3 cut(s) 744, 761, 1542
VspI ATTAAT 1 cut(s) 528
XapI RAATTY 9 cut(s) 220, 399, 731, 752, 772, 862, 1071, 1359, 1680
XbaI TCTAGA 1 cut(s) 1432
XcmI CCANNNNNNNNNTGG 1 cut(s) 893
XmiI GTMKAC 1 cut(s) 1693
XmnI GAANNNNTTC 1 cut(s) 493
XspI CTAG 7 cut(s) 512, 843, 848, 938, 1103, 1433, 1752
ZrmI AGTACT 3 cut(s) 996, 2025, 2042
Zsp2I ATGCAT 1 cut(s) 1431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.