RchiOBHm_Chr4g0408081
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
30523008 .. 30526205
3198 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37925

Sequence Viewer

Length: 2994 bp
ATGGGGGGAGTTTTGGTTATGAAATTGGCTATGATATCCTCGTTAGTTTTGAACTATTGTAGCTCTATGCAATTGAATCATCCTAGAGTCGAAGGGAATGAGACGGATAGGCTGGCTCTGCTAGCAATCAAAGCTCAAATACAACACGATGCCAACCAGGTCACAAGCTCATGGAATGAAACCCTTCACTTTTGCCTGTGGCACGGCGTCACCTGCAGTCGACGACATCGCCAAAGGGTGACGAAGCTGGAGCTGGACTCTCAAGCTTTGGGGGGATCCATATCTCCACACATAGGAAATCTAAGCTTCTTAAGAGTGCTACATCTCCAGAACAATAGCTTCACTCATCAAATCCCTCCTCAAATTGGGCATTTGCATAGATTGCAGGTATTGCTTCTAAACAATAACTCACTTAATGGCACCATTCCTGCCAATATATCCAATTGCTTCAAACTCATCACTCTCCGTCTTGATAGAAACAATATAGTGGGTCAAATTCCTCCCCAGCTCAGTTCCTTGTCAAAGCTTCGGAATTTTGTTTTAGAATTCAACAATTTAACAGGAGATATCCCTCCTTCTTTGGGGAACCTTTCGTCTCTTGAAATAATTTCTCTAGATGTCAATAACTTAGAAGGAAGCCTCCCTTGTTCTCTATGCCAGTGGAAAAAATTAACAATTTTCTATTTCGGAGTAAATAGGTTGTCTGGTACCATCCCTTCCTGCATTTATAACCTCTCTGGAATAGTTAAATTCGAGGCATCACTAAACCAAATTCAAGGAAGTATTTCCCCAAACTTGAGCAATGCTTTTCCAAACCTTCAAATCTTTTCCATTGCCCACAATCAATTTACCGGGGCCATCCCTTGGTCAATATCCAATGCAATAAATCTTGTGTTGTTTCAATGTTCATACAACAAACTCTCTGGACAGGTGCCAAATTTACGAAATCTTCATAACCTTAGGGTATTCAGTGTCGATACTAATAATCTTGGAAGCGGTAAACAAGGTGACTTGAGTTTTGTCTCAGAATTGATAAATGCCACACAGCTTATTTGGTTGCATGTCGGCGACAACAATTTTGGAGGGACGTTGCCGACATCAATATCCAATCTCTCAACCAATCTCTACTTTCTTTCGTTTGATAAAAACCAACTACATGGAAGCATCCCCAGGGGATTAGGGAATCTTGTCAACTTGCAATTACTCGTGATGAGAGAAAACTCCTTCACAGGTGGTATCCCCAATGACATCGGGAAGCTTTCAAGGGTTGAGGAATTGTATATTAATGACAACCAATTATCAGGGAGCATTCCATCTTCTCTTGAAAATTTAACATTGTTAACAATACTCCAATTGCAAGAGAATAATCTAGAGGGCAGCATCCCTTCCAGCCTAGGGAAATGCCATTGGTTACTAGAACTAATTCTTTCTAGAAACAAACTGAACGGCACAATACCACCTCAGATTGGAAAATTGAAGAATCTAGGTGCACTGGACGTTTCTAACAACTTGTTATCAGAAGAACTTCCCAGTAGCCTCGGCAATTGCAAGAGCTTAGAAGAACTACACTTGCAAGGCAACTTCTTCTGGGGACCAATTCCTTCATCTATGAAGGAATTGAGAGGGATTCGGGATTTAGACCTTTCTCGCAACAATTTCTCAGGAGGTATTCCACAGTTCTTCGAGGACCTTGGAAATTTGGAGAATCTGAACCTATCCTTCAATCAGTTTTGGGGAGCTGTACCAACTAGCGGTGTTTTTAAAAATGCAAGTGCTACTTCAGTTGCTGGAAACATGAGGCTCTGCGGCGGTATTGCTAATCTTCAACTTCCTGTGTGCAAGTCTAATGAGTCTAAAGGAGGAGGGTTGTCCCGTAGAATGAAACTAATGATCTCTTTAGTTTCCGGGTTTAGTCTTTTGGGATTGGCTATAGTGCTTTCTTGTTTCCTTCTTGGAAAGAAAAGGAAACAATCTGACTTAAACACTACTAGGAACTCTATTTTGCAAGTGTCGTATGCTACACTCCTAAAAGCTACTGATGGTTTTTCGTCAACTAATTTGATTGGTGTGGGTGCTTTTGGATCTGTTTACAAAGGAATTCTTGCTGATGGAGTAGTTGTCGCTGTGAAAGTGCTCAACATGTTACACCGGGGAGCATCTAAGAGTTTCATGGCCGAATGTGAGGCATTGAGAAATATCCGACATCGAAATTTGGTCAAGATCTTAACTGCATGTTCAAGTATTGATTTTAGTGGCAATGATTTCAAGGCTCTTGTTTACGAGTTCATGGACAATGGGACCTTAGAGGAGTGGTTACATCCATCCACTGGAAATGAAGAGGTGACAGAAGCACCCAAAAGTTTAAGCCTTGTTCAGAGGCTTGACATTGCCATTGATGTTGCTAGTGCATTGGGTTATCTTCACAAGCACTGTGAAACACCGATCGTTCATTGTGATCTCAAACCAAGTAATGTACTTTTGGATACTGACCTAACTGGACATGTGTCTGACTTTGGGATGTCAAGGTTTCTTTCAAAACCAACCACGAGTGTTTCTGGAAATCAATCAAGCTCTATTGGAATTAGAGGATCGATTGGTTATGCTGCACCAGAGTATGGTATGGGAAGTGAAGTATCCACATACGGGGATGTTTACAGCTTTGGCATTCTCTTGTTAGAAATGTTTACGGGGAAACGACCAACTGATCACGTGTTCAGTGACAGCTTGAATCTTCATAATTATGTGAAGAAAGCTCTCCCTGAACTTGTTTCAGAGATTTCAGAATCACTAGTTCTTCAAGAAGGCACCACCAATGTCGCTGAAGCTCACAGGCATAGTCGATTGATCAGTGTGAGAGCACAGAAAATTGAAGAGTGCTTGACTCTGATACTTGGTATAGGAATTGCATGTTCTGTTGAATCCCCAACAAACAGAAAGGATATCAATGATGTTGCATCTGAATTGCAATCCATTAGGCGCAATCTTCTCAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

997

Amino Acids

108.93

Weight (kDa)

7.82

Isoelectric Point (pI)

35.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 73 2.4e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 79 - 224 4.4e-13 Leucine-rich repeat region
LRR_14 PF23598 298 - 474 1.3e-08 Leucine-rich repeat region
LRR_14 PF23598 439 - 571 9.3e-11 Leucine-rich repeat region
LRR_8 PF13855 518 - 577 6.2e-07 Leucine rich repeat
Pkinase PF00069 684 - 915 3.5e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 686 - 905 1.4e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 729
AarI CACCTGC 1 cut(s) 221
Acc36I ACCTGC 2 cut(s) 221, 376
Acc65I GGTACC 1 cut(s) 707
AccB1I GGYRCC 4 cut(s) 419, 707, 931, 2804
AccB7I CCANNNNNTGG 3 cut(s) 864, 2327, 2615
AccI GTMKAC 1 cut(s) 220
AciI CCGC 4 cut(s) 996, 1752, 1806, 1809
AclWI GGATC 4 cut(s) 270, 283, 2089, 2596
AcoI YGGCCR 1 cut(s) 2172
AcuI CTGAAG 2 cut(s) 1764, 2841
AcvI CACGTG 1 cut(s) 2710
AcyI GRCGYC 1 cut(s) 207
AfaI GTAC 3 cut(s) 709, 1743, 2475
AflII CTTAAG 1 cut(s) 310
AflIII ACRYGT 3 cut(s) 2139, 2500, 2709
AhlI ACTAGT 1 cut(s) 2788
AjnI CCWGG 2 cut(s) 156, 1169
Alw21I GWGCWC 3 cut(s) 1492, 2136, 2860
Alw26I GTCTC 3 cut(s) 95, 600, 1027
Alw44I GTGCAC 1 cut(s) 1488
AlwI GGATC 4 cut(s) 270, 283, 2089, 2596
AlwNI CAGNNNCTG 1 cut(s) 1787
AoxI GGCC 2 cut(s) 855, 2172
ApaLI GTGCAC 1 cut(s) 1488
ApeKI GCWGC 2 cut(s) 1377, 2603
ArsI GACNNNNNNTTYG 4 cut(s) 1001, 1033, 1061, 1093
AseI ATTAAT 1 cut(s) 1284
Asp700I GAANNNNTTC 4 cut(s) 183, 784, 1422, 1524
Asp718I GGTACC 1 cut(s) 707
AspA2I CCTAGG 1 cut(s) 1393
AspLEI GCGC 1 cut(s) 2979
AspS9I GGNCC 4 cut(s) 855, 1592, 1687, 2298
AsuC2I CCSGG 3 cut(s) 853, 1906, 2150
AsuHPI GGTGA 4 cut(s) 202, 250, 1019, 2353
AsuNHI GCTAGC 1 cut(s) 121
AvaII GGWCC 3 cut(s) 1592, 1687, 2298
AvrII CCTAGG 1 cut(s) 1393
AxyI CCTNAGG 1 cut(s) 959
BaeGI GKGCMC 1 cut(s) 1492
BamHI GGATCC 1 cut(s) 275
BanI GGYRCC 4 cut(s) 419, 707, 931, 2804
BarI GAAGNNNNNNTAC 2 cut(s) 700, 732
BauI CACGAG 2 cut(s) 1205, 2545
BbrPI CACGTG 1 cut(s) 2710
Bbv12I GWGCWC 3 cut(s) 1492, 2136, 2860
BbvI GCAGC 2 cut(s) 1389, 2590
BccI CCATC 6 cut(s) 719, 866, 1321, 2033, 2102, 2329
BceAI ACGGC 2 cut(s) 220, 1462
BciT130I CCWGG 2 cut(s) 158, 1171
BciVI GTATCC 3 cut(s) 1247, 2476, 2644
BclI TGATCA 2 cut(s) 2704, 2844
BcnI CCSGG 3 cut(s) 853, 1906, 2150
BcoDI GTCTC 3 cut(s) 95, 600, 1027
BcuI ACTAGT 1 cut(s) 2788
BfmI CTRYAG 2 cut(s) 214, 1929
BfrI CTTAAG 1 cut(s) 310
BfuAI ACCTGC 2 cut(s) 221, 376
BfuI GTATCC 3 cut(s) 1247, 2476, 2644
BglII AGATCT 1 cut(s) 2220
BisI GCNGC 3 cut(s) 1378, 1807, 2604
BlnI CCTAGG 1 cut(s) 1393
BlsI GCNGC 3 cut(s) 1379, 1808, 2605
Bme1390I CCNGG 5 cut(s) 158, 853, 1171, 1906, 2150
Bme18I GGWCC 3 cut(s) 1592, 1687, 2298
BmgT120I GGNCC 4 cut(s) 855, 1592, 1687, 2298
BmiI GGNNCC 9 cut(s) 277, 421, 587, 709, 856, 933, 1593, 2299, 2806
BmrFI CCNGG 5 cut(s) 158, 853, 1171, 1906, 2150
BmrI ACTGGG 1 cut(s) 1524
BmsI GCATC 6 cut(s) 139, 767, 1173, 1389, 2165, 2963
BmtI GCTAGC 1 cut(s) 125
BmuI ACTGGG 1 cut(s) 1524
BoxI GACNNNNGTC 1 cut(s) 2503
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 2 cut(s) 269, 311
BpuEI CTTGAG 3 cut(s) 246, 817, 1033
BpuMI CCSGG 3 cut(s) 853, 1906, 2150
Bsa29I ATCGAT 1 cut(s) 2591
BsaAI YACGTR 1 cut(s) 2710
BsaBI GATNNNNATC 1 cut(s) 280
BsaHI GRCGYC 1 cut(s) 207
BsaJI CCNNGG 8 cut(s) 852, 863, 1169, 1170, 1393, 1537, 1690, 2149
BsaXI ACNNNNNCTCC 3 cut(s) 30, 2103, 2133
Bse1I ACTGG 5 cut(s) 658, 1497, 1530, 2332, 2500
Bse21I CCTNAGG 1 cut(s) 959
Bse3DI GCAATG 4 cut(s) 808, 831, 2263, 2385
Bse8I GATNNNNATC 1 cut(s) 280
BseBI CCWGG 2 cut(s) 158, 1171
BseCI ATCGAT 1 cut(s) 2591
BseDI CCNNGG 8 cut(s) 852, 863, 1169, 1170, 1393, 1537, 1690, 2149
BseGI GGATG 9 cut(s) 79, 711, 858, 1164, 1380, 2317, 2321, 2523, 2653
BseJI GATNNNNATC 1 cut(s) 280
BseMI GCAATG 4 cut(s) 808, 831, 2263, 2385
BseMII CTCAG 4 cut(s) 523, 1038, 1475, 1674
BseNI ACTGG 5 cut(s) 658, 1497, 1530, 2332, 2500
BseRI GAGGAG 3 cut(s) 348, 1875, 2321
BseSI GKGCMC 1 cut(s) 1492
BseXI GCAGC 2 cut(s) 1389, 2590
BseYI CCCAGC 1 cut(s) 504
BsgI GTGCAG 1 cut(s) 2589
Bsh1285I CGRYCG 1 cut(s) 2445
BshFI GGCC 2 cut(s) 857, 2174
BshNI GGYRCC 4 cut(s) 419, 707, 931, 2804
BshVI ATCGAT 1 cut(s) 2591
BsiEI CGRYCG 1 cut(s) 2445
BsiHKAI GWGCWC 3 cut(s) 1492, 2136, 2860
BsiSI CCGG 3 cut(s) 852, 1905, 2149
BslFI GGGAC 4 cut(s) 1099, 1605, 1855, 2311
BsmAI GTCTC 3 cut(s) 95, 600, 1027
BsmBI CGTCTC 2 cut(s) 95, 600
BsmFI GGGAC 4 cut(s) 1099, 1605, 1855, 2311
BsmI GAATGC 2 cut(s) 1308, 2664
BsnI GGCC 2 cut(s) 857, 2174
Bsp1286I GDGCHC 3 cut(s) 1492, 2136, 2860
Bsp143I GATC 9 cut(s) 275, 1890, 2081, 2220, 2442, 2455, 2588, 2704, 2844
BspACI CCGC 4 cut(s) 996, 1752, 1806, 1809
BspANI GGCC 2 cut(s) 857, 2174
BspCNI CTCAG 4 cut(s) 522, 1037, 1474, 1673
BspDI ATCGAT 1 cut(s) 2591
BspLI GGNNCC 9 cut(s) 277, 421, 587, 709, 856, 933, 1593, 2299, 2806
BspMAI CTGCAG 1 cut(s) 218
BspMI ACCTGC 2 cut(s) 221, 376
BspOI GCTAGC 1 cut(s) 125
BspPI GGATC 4 cut(s) 270, 283, 2089, 2596
BspT107I GGYRCC 4 cut(s) 419, 707, 931, 2804
BspTI CTTAAG 1 cut(s) 310
BsrDI GCAATG 4 cut(s) 808, 831, 2263, 2385
BsrI ACTGG 5 cut(s) 658, 1497, 1530, 2332, 2500
BssECI CCNNGG 8 cut(s) 852, 863, 1169, 1170, 1393, 1537, 1690, 2149
BssMI GATC 9 cut(s) 275, 1890, 2081, 2220, 2442, 2455, 2588, 2704, 2844
BssNI GRCGYC 1 cut(s) 207
BssSI CACGAG 2 cut(s) 1205, 2545
BssT1I CCWWGG 3 cut(s) 863, 1393, 1690
Bst2BI CACGAG 2 cut(s) 1205, 2545
Bst2UI CCWGG 2 cut(s) 158, 1171
Bst4CI ACNGT 2 cut(s) 1677, 2432
Bst6I CTCTTC 2 cut(s) 2331, 2865
BstACI GRCGYC 1 cut(s) 207
BstAFI CTTAAG 1 cut(s) 310
BstAPI GCANNNNNTGC 2 cut(s) 382, 391
BstBAI YACGTR 1 cut(s) 2710
BstC8I GCNNGC 2 cut(s) 114, 123
BstF5I GGATG 9 cut(s) 79, 711, 858, 1164, 1380, 2317, 2321, 2523, 2653
BstHHI GCGC 1 cut(s) 2979
BstKTI GATC 9 cut(s) 278, 1893, 2084, 2223, 2445, 2458, 2591, 2707, 2847
BstMAI GTCTC 3 cut(s) 95, 600, 1027
BstMBI GATC 9 cut(s) 275, 1890, 2081, 2220, 2442, 2455, 2588, 2704, 2844
BstMCI CGRYCG 1 cut(s) 2445
BstMWI GCNNNNNNNGC 6 cut(s) 118, 122, 131, 213, 382, 391
BstNI CCWGG 2 cut(s) 158, 1171
BstNSI RCATGY 5 cut(s) 1064, 2143, 2235, 2504, 2910
BstPAI GACNNNNGTC 1 cut(s) 2503
BstSCI CCNGG 5 cut(s) 156, 851, 1169, 1904, 2148
BstSFI CTRYAG 2 cut(s) 214, 1929
BstSLI GKGCMC 1 cut(s) 1492
BstV1I GCAGC 2 cut(s) 1389, 2590
BstX2I RGATCY 3 cut(s) 275, 2081, 2220
BstXI CCANNNNNNTGG 1 cut(s) 1157
BstYI RGATCY 3 cut(s) 275, 2081, 2220
Bsu15I ATCGAT 1 cut(s) 2591
Bsu36I CCTNAGG 1 cut(s) 959
BsuI GTATCC 3 cut(s) 1247, 2476, 2644
BsuRI GGCC 2 cut(s) 857, 2174
BsuTUI ATCGAT 1 cut(s) 2591
BtgZI GCGATG 1 cut(s) 212
BtsCI GGATG 9 cut(s) 79, 711, 858, 1164, 1380, 2317, 2321, 2523, 2653
BtsIMutI CAGTG 7 cut(s) 665, 976, 1490, 2325, 2428, 2722, 2854
BveI ACCTGC 2 cut(s) 221, 376
Cac8I GCNNGC 2 cut(s) 114, 123
CaiI CAGNNNCTG 1 cut(s) 1787
CfoI GCGC 1 cut(s) 2979
Cfr13I GGNCC 4 cut(s) 855, 1592, 1687, 2298
ClaI ATCGAT 1 cut(s) 2591
CseI GACGC 1 cut(s) 196
CsiI ACCWGGT 1 cut(s) 156
Csp6I GTAC 3 cut(s) 708, 1742, 2474
CviQI GTAC 3 cut(s) 708, 1742, 2474
DpnI GATC 9 cut(s) 277, 1892, 2083, 2222, 2444, 2457, 2590, 2706, 2846
DpnII GATC 9 cut(s) 275, 1890, 2081, 2220, 2442, 2455, 2588, 2704, 2844
DraI TTTAAA 1 cut(s) 1762
EaeI YGGCCR 1 cut(s) 2172
Eam1104I CTCTTC 2 cut(s) 2331, 2865
EarI CTCTTC 2 cut(s) 2331, 2865
Eco130I CCWWGG 3 cut(s) 863, 1393, 1690
Eco32I GATATC 3 cut(s) 36, 568, 2941
Eco47I GGWCC 3 cut(s) 1592, 1687, 2298
Eco57I CTGAAG 2 cut(s) 1764, 2841
Eco72I CACGTG 1 cut(s) 2710
Eco81I CCTNAGG 1 cut(s) 959
EcoO109I RGGNCCY 2 cut(s) 1687, 2298
EcoRI GAATTC 2 cut(s) 545, 2097
EcoRII CCWGG 2 cut(s) 156, 1169
EcoRV GATATC 3 cut(s) 36, 568, 2941
EcoT14I CCWWGG 3 cut(s) 863, 1393, 1690
ErhI CCWWGG 3 cut(s) 863, 1393, 1690
Esp3I CGTCTC 2 cut(s) 95, 600
FalI AAGNNNNNCTT 6 cut(s) 628, 660, 1762, 1794, 2085, 2117
FaqI GGGAC 4 cut(s) 1099, 1605, 1855, 2311
FbaI TGATCA 2 cut(s) 2704, 2844
FblI GTMKAC 1 cut(s) 220
Fnu4HI GCNGC 3 cut(s) 1378, 1807, 2604
FokI GGATG 9 cut(s) 66, 698, 845, 1151, 1367, 2304, 2308, 2530, 2660
Fsp4HI GCNGC 3 cut(s) 1378, 1807, 2604
GlaI GCGC 1 cut(s) 2978
GluI GCNGC 3 cut(s) 1378, 1807, 2604
GsaI CCCAGC 1 cut(s) 508
GsuI CTGGAG 2 cut(s) 269, 311
HaeIII GGCC 2 cut(s) 857, 2174
HapII CCGG 3 cut(s) 852, 1905, 2149
HgaI GACGC 1 cut(s) 196
HhaI GCGC 1 cut(s) 2979
Hin1I GRCGYC 1 cut(s) 207
Hin6I GCGC 1 cut(s) 2977
HinP1I GCGC 1 cut(s) 2977
HincII GTYRAC 4 cut(s) 221, 1192, 1341, 2052
HindII GTYRAC 4 cut(s) 221, 1192, 1341, 2052
HindIII AAGCTT 4 cut(s) 264, 304, 524, 1256
HpaI GTTAAC 1 cut(s) 1341
HpaII CCGG 3 cut(s) 852, 1905, 2149
HphI GGTGA 4 cut(s) 202, 250, 1019, 2353
Hpy99I CGWCG 1 cut(s) 225
HpyCH4III ACNGT 2 cut(s) 1677, 2432
HpyCH4IV ACGT 3 cut(s) 1088, 1497, 2709
HpyF10VI GCNNNNNNNGC 6 cut(s) 118, 122, 131, 213, 382, 391
HpySE526I ACGT 3 cut(s) 1088, 1497, 2709
Hsp92I GRCGYC 1 cut(s) 207
HspAI GCGC 1 cut(s) 2977
KpnI GGTACC 1 cut(s) 711
Ksp22I TGATCA 2 cut(s) 2704, 2844
KspAI GTTAAC 1 cut(s) 1341
Kzo9I GATC 9 cut(s) 275, 1890, 2081, 2220, 2442, 2455, 2588, 2704, 2844
LmnI GCTCC 4 cut(s) 250, 1305, 1736, 2153
Lsp1109I GCAGC 2 cut(s) 1389, 2590
LweI GCATC 6 cut(s) 139, 767, 1173, 1389, 2165, 2963
MabI ACCWGGT 1 cut(s) 156
MaeII ACGT 3 cut(s) 1088, 1497, 2709
MaeIII GTNAC 9 cut(s) 160, 208, 238, 1007, 1410, 2142, 2313, 2341, 2717
MalI GATC 9 cut(s) 277, 1892, 2083, 2222, 2444, 2457, 2590, 2706, 2846
MboI GATC 9 cut(s) 275, 1890, 2081, 2220, 2442, 2455, 2588, 2704, 2844
MfeI CAATTG 4 cut(s) 71, 442, 1352, 1543
MflI RGATCY 3 cut(s) 275, 2081, 2220
MhlI GDGCHC 3 cut(s) 1492, 2136, 2860
MlyI GAGTC 4 cut(s) 96, 251, 1859, 2875
MmeI TCCRAC 1 cut(s) 2224
MroXI GAANNNNTTC 4 cut(s) 183, 784, 1422, 1524
MslI CAYNNNNRTG 1 cut(s) 2739
MspCI CTTAAG 1 cut(s) 310
MspI CCGG 3 cut(s) 852, 1905, 2149
MspR9I CCNGG 5 cut(s) 158, 853, 1171, 1906, 2150
MunI CAATTG 4 cut(s) 71, 442, 1352, 1543
Mva1269I GAATGC 2 cut(s) 1308, 2664
MvaI CCWGG 2 cut(s) 158, 1171
MwoI GCNNNNNNNGC 6 cut(s) 118, 122, 131, 213, 382, 391
NciI CCSGG 3 cut(s) 853, 1906, 2150
NdeII GATC 9 cut(s) 275, 1890, 2081, 2220, 2442, 2455, 2588, 2704, 2844
NheI GCTAGC 1 cut(s) 121
NlaIV GGNNCC 9 cut(s) 277, 421, 587, 709, 856, 933, 1593, 2299, 2806
NmeAIII GCCGAG 1 cut(s) 1518
NmuCI GTSAC 6 cut(s) 160, 208, 238, 1007, 2341, 2717
NspI RCATGY 5 cut(s) 1064, 2143, 2235, 2504, 2910
PaqCI CACCTGC 1 cut(s) 221
PasI CCCWGGG 1 cut(s) 1170
PciI ACATGT 2 cut(s) 2139, 2500
PctI GAATGC 2 cut(s) 1308, 2664
PdmI GAANNNNTTC 4 cut(s) 183, 784, 1422, 1524
PfeI GAWTC 8 cut(s) 76, 1183, 1480, 1627, 1705, 2728, 2783, 2918
PflMI CCANNNNNTGG 3 cut(s) 864, 2327, 2615
PkrI GCNGC 3 cut(s) 1379, 1808, 2605
Ple19I CGATCG 1 cut(s) 2445
PleI GAGTC 4 cut(s) 95, 251, 1858, 2875
PmaCI CACGTG 1 cut(s) 2710
PmlI CACGTG 1 cut(s) 2710
PpsI GAGTC 4 cut(s) 95, 251, 1858, 2875
Ppu21I YACGTR 1 cut(s) 2710
PpuMI RGGWCCY 2 cut(s) 1687, 2298
PscI ACATGT 2 cut(s) 2139, 2500
PshAI GACNNNNGTC 1 cut(s) 2503
PshBI ATTAAT 1 cut(s) 1284
PsiI TTATAA 1 cut(s) 729
Psp5II RGGWCCY 2 cut(s) 1687, 2298
Psp6I CCWGG 2 cut(s) 156, 1169
PspCI CACGTG 1 cut(s) 2710
PspFI CCCAGC 1 cut(s) 504
PspGI CCWGG 2 cut(s) 156, 1169
PspN4I GGNNCC 9 cut(s) 277, 421, 587, 709, 856, 933, 1593, 2299, 2806
PspPI GGNCC 4 cut(s) 855, 1592, 1687, 2298
PspPPI RGGWCCY 2 cut(s) 1687, 2298
PstI CTGCAG 1 cut(s) 218
PstNI CAGNNNCTG 1 cut(s) 1787
PsuI RGATCY 3 cut(s) 275, 2081, 2220
PvuI CGATCG 1 cut(s) 2445
RsaI GTAC 3 cut(s) 709, 1743, 2475
RsaNI GTAC 3 cut(s) 708, 1742, 2474
RseI CAYNNNNRTG 1 cut(s) 2739
SalI GTCGAC 1 cut(s) 219
SatI GCNGC 3 cut(s) 1378, 1807, 2604
Sau3AI GATC 9 cut(s) 275, 1890, 2081, 2220, 2442, 2455, 2588, 2704, 2844
Sau96I GGNCC 4 cut(s) 855, 1592, 1687, 2298
SchI GAGTC 4 cut(s) 96, 251, 1859, 2875
ScrFI CCNGG 5 cut(s) 158, 853, 1171, 1906, 2150
SduI GDGCHC 3 cut(s) 1492, 2136, 2860
SexAI ACCWGGT 1 cut(s) 156
SfaNI GCATC 6 cut(s) 139, 767, 1173, 1389, 2165, 2963
SfcI CTRYAG 2 cut(s) 214, 1929
SinI GGWCC 3 cut(s) 1592, 1687, 2298
SmiMI CAYNNNNRTG 1 cut(s) 2739
SmlI CTYRAG 4 cut(s) 261, 310, 796, 1012
SmoI CTYRAG 4 cut(s) 261, 310, 796, 1012
SpeI ACTAGT 1 cut(s) 2788
SsiI CCGC 4 cut(s) 996, 1752, 1806, 1809
StyD4I CCNGG 5 cut(s) 156, 851, 1169, 1904, 2148
StyI CCWWGG 3 cut(s) 863, 1393, 1690
TaaI ACNGT 2 cut(s) 1677, 2432
TaiI ACGT 3 cut(s) 1091, 1500, 2712
TaqI TCGA 8 cut(s) 90, 220, 753, 975, 1683, 2206, 2591, 2839
TatI WGTACW 1 cut(s) 2473
TauI GCSGC 1 cut(s) 1809
TfiI GAWTC 8 cut(s) 76, 1183, 1480, 1627, 1705, 2728, 2783, 2918
TscAI CASTG 7 cut(s) 665, 976, 1497, 2332, 2435, 2722, 2854
TseFI GTSAC 6 cut(s) 160, 208, 238, 1007, 2341, 2717
TseI GCWGC 2 cut(s) 1377, 2603
Tsp45I GTSAC 6 cut(s) 160, 208, 238, 1007, 2341, 2717
TspGWI ACGGA 2 cut(s) 119, 455
TspRI CASTG 7 cut(s) 665, 976, 1497, 2332, 2435, 2722, 2854
Van91I CCANNNNNTGG 3 cut(s) 864, 2327, 2615
Vha464I CTTAAG 1 cut(s) 310
VneI GTGCAC 1 cut(s) 1488
VpaK11BI GGWCC 3 cut(s) 1592, 1687, 2298
VspI ATTAAT 1 cut(s) 1284
XbaI TCTAGA 3 cut(s) 613, 1369, 1430
XceI RCATGY 5 cut(s) 1064, 2143, 2235, 2504, 2910
XmaJI CCTAGG 1 cut(s) 1393
XmiI GTMKAC 1 cut(s) 220
XmnI GAANNNNTTC 4 cut(s) 183, 784, 1422, 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.