MD01G1150100.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
25876361 .. 25879911
3551 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1150100.v1.1.491

Sequence Viewer

Length: 3144 bp
ATGGGGTTCCCAGGTATTGTTGTTAGCGTTTGGTCAATTTTCATGCAACTATTTCTCCTAATGGTCACTTCATCCTCTACTCTGGGAGGAGATGAAGTGGATAGACTGTCCTTGCTTGCCTTTAAAGCTAAAATTGTGAGTGATGACATGGCCATCCTCGCCTCCTGGAATGAATCCCTCCACTTCTGTGAATGGCCTGGCATTTCTTGCGGCCGCAGACACCAGAGAGTCACGGTGTTGGACCTCCGATCAAGCCGGCTAGAAGGTCTACTATCTCCCAACATTGGAAACTTGAGCTTTCTCAGGACATTAAACCTCGAAAACAATACATTCAGGCACACCATCCCTCCAGAAATTGGTCGTTTGTCCCGGCTGCAACAATTACGCCTTGGTAACAATTCCTTCAGGGGTGATATTCCGGTCAACATATCACGTTGCTCTAAGCTCCGCTACCTTGACTTAGGCGATAACATTCTCGGTGGCAAGATTCATATTGAAATCGGCTTCTTGTCCAACCTTCAGGTACTTAATTTAAGCAGGAACAATTTAAATGGGGAAATCCCACCTTCCTTGGGAAATCTTTCTTCTCTTCAGATGCTATCTTTGCAACAAAATAATCTGCAGGGAGGTATTCCAAATAGCCTTGGCCAGTTGAATAGCTTAAAAAATCTTTCTTTGGGTTACAATAATTTGAATGATACCATCCCTCCCTCCATATACAACCTCTCTTCTATTACAATCATCTCGGTGCTAGAAAACCGACTTCATGGAACTCTTCCTCCTGGCTTGGGCCACACTGTTTTTCCAAACCTCGAAGCCTTTTATTTTCATTTCAACGGATTCAGTGGACAAATACCAGTTTCAATCTCCAATGCATCCAACCTTGCATTATTTGGTATCTCAACCAATATGTTTACCGGAAGAGTGCCTAGCCTGGCAGGGATGTCCAATCTGTTTCGGTTAGAACTGGATGCTAACAATCTTGGAAATAAAGAGGATGGTGACTTGGACTTTCTCTCTTCTCTGGTTAATTGCACCAATTTAGAGCGTTTGGATATCAGTGACAATAATTTTGGAGGAGTGCTGCCTGAATCTCTCAGCAACCTCTCAACAAAGCTCGTGGCAATGACACTGGGAGGAAATTATTTAAGCGGAAGCATTCCGGTTGATATCGGAAATCTCATCAACTTGGGGGTACTAGGCATTGGGGGAAATCGGTTGAAGGGTCCTATACCAAGCTCATTATCTAAACTAAGTAAACTGTATGAGCTGTCGTTGAATCACAATGGGCTGTCAGGTACCATCCCATCTTCTGTAGGCAATCTAACTTCGTTAGGCAGATTAGTTCTCATGTCAAACATCTTAGAGGGAATCATACCTCCAAGTCTCGGTGAATGCAGAAATTTGCTAGCTTTGGATCTTTCTCAAAATAATCTTAGCGGTCCCATTCCACATGAAGTCATGAGTTTATCATCCCTGTCACTAGAGTTGGACCTATCCAGCAACCAACTTACTGGTTCGATTCCCTTCGAAGTGGGTCATATGGTGAATCTTGCTTCCTTGGATCTTTCTGAGAACCAATTATCTGATGGCATTCCTGAAACCTTAGGGAGTTGCGTAAGTTTGACGAGTTTGTCTCTGAGAGGAAACTTGTTGCAGGGAACAATTCCTGATTCCTTAAGTTCTCTAAGAGGGATCGAAGATATCGACCTCTCTCATAACAGCTTTTTTGGCAGAATTCCCAACTATTTGGGGAGCTTCCGTTTCTTGCTGAATTTGAACCTATCATATAATGATTTTCAGGATGCAATACCAATGGAAGGAGTTTTCAAGAATACAACTGTGCTTCATATCAAAGGAAACCCACAGCTTTGTGGAGGTATACCTCAGTTACAATTGCCCAAATGCAACTCCAACGAATCTAAGCAAGAAATATTTCCATGGCGGAAATTTCTTATCTCATTTGCTTGTGGGGGCTCTATTGGAGTTATCTTACTGTTGTGGTGCGTCATTCTTTATCCACCCAAAAAAGCATTGAGCTTTATGCTTCTTTATCTATCAAGAAAAGCAAGATTGAAGTTAACTTTAGGTTCCTCATGGGAGGTCTCACTCTTAAAAGTTTCATATGGAGATCTCCTCGAAGCAACTAATGGGTTCTCTTCTCAGAATTTGATTGGTGCTGGTAGCTTCGGGTCTGTGTACAGGGGAATTATCAATCAGGAAGAAAGAATTGTTGCAGTGAAAGTACTCAATGCTCATTGTTCAAGAGAAAGTTTCATAGCTGAATGTGAAGCCTTGAAAAACATTAGGCACCGAAATCTTATCAAATTACTGACCGTGTGTTTAAGTATTGACTTTCAAGGAAACGATTTCAAAGCTTTGGTTTATGAATTCATGACGAATGGAAATCTAGAAGAGTGGCTGCATTTTTCAGCTCATAGACCACCTGGGGCACCCATTGTGCATGGGCATTTGAACCTTATTCAGAGGGTAAACATTGCCATCGACGTGGCTAATGCTCTGAATTATTTGCACAACCAATGCCACATACCAATAGTTCATTGTGATTTGAAACCCAGCAACGTTCTCTTGGAAGGCAACATGACTGCCCGTGTTGCAGATTTTGGTTTAGCAAGGTACGTCAAGGATGCTTCGTGTTCACTTCCTTCACACAGAAGCACTGCCAATGTCATAAATGGCTCCATAGGCTATATTGCCCCAGAGTATGGCATGGGAAATGAGGTTTCAGCATATGGAGATGTGTATAGCTATGGAATCCTGCTGTTGGAGATGCTTACTGGAAAGAGACCGACGGATGAAATGTTCAAAGATGGTCTGACCCTCCACAACTTTGTTCAGATGGCATTGCCTGAACGCGTAGAAGAAATATGTGATCCGGTGCTTCTTCAAGTTAAACCAAGCAGCATTTGTAGTAATGCCACAAACAATAGGAACCATGTCCAAGATGATCAAAGGCAAAGAATTAGCAAGTGCTTGGTTATCATGGCCAAGATAGGAGTTGCTTGTTCTGCAGATTTGCCGAGAGAGCGGATGGATATTGGACGTGTTGTAGAAGGATTATGCCTAGTTAGGGATGTACTAACTGGAACCTCAATTCCTATATATCATATGATCACGGCCTAA

Protein Analysis

1048

Amino Acids

114.35

Weight (kDa)

6.35

Isoelectric Point (pI)

34.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 70 4.8e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 143 - 251 1.4e-10 Leucine-rich repeat region
LRR_14 PF23598 386 - 451 9.9e-06 Leucine-rich repeat region
LRR_8 PF13855 517 - 575 3.3e-07 Leucine rich repeat
Pkinase PF00069 720 - 960 1.4e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 722 - 944 5.9e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1633
Acc65I GGTACC 1 cut(s) 1298
AccB1I GGYRCC 3 cut(s) 1298, 2310, 2452
AccB7I CCANNNNNTGG 2 cut(s) 356, 2726
AccBSI CCGCTC 1 cut(s) 3049
AccI GTMKAC 2 cut(s) 268, 1882
AccII CGCG 1 cut(s) 2877
AciI CCGC 7 cut(s) 210, 214, 448, 1152, 1440, 1945, 3049
AclI AACGTT 1 cut(s) 2583
AclWI GGATC 4 cut(s) 1425, 1572, 1703, 2888
AcoI YGGCCR 4 cut(s) 150, 211, 646, 3006
AcsI RAATTY 6 cut(s) 1402, 1737, 1774, 1949, 2167, 2390
AcuI CTGAAG 3 cut(s) 388, 503, 575
AfaI GTAC 7 cut(s) 525, 1197, 1300, 2201, 2247, 2639, 3099
AfiI CCNNNNNNNGG 9 cut(s) 284, 356, 572, 788, 1388, 1820, 2726, 2785, 3091
AflII CTTAAG 1 cut(s) 1678
AflIII ACRYGT 2 cut(s) 2875, 3064
AjiI CACGTC 2 cut(s) 2509, 3065
AjnI CCWGG 6 cut(s) 10, 164, 196, 781, 933, 2446
AleI CACNNNNGTG 1 cut(s) 186
AloI GAACNNNNNNTCC 6 cut(s) 763, 795, 2807, 2839, 3100, 3132
Alw26I GTCTC 4 cut(s) 1391, 1641, 2110, 2800
AlwI GGATC 4 cut(s) 1425, 1572, 1703, 2888
AoxI GGCC 7 cut(s) 150, 194, 211, 646, 790, 3006, 3138
ApeKI GCWGC 4 cut(s) 373, 1084, 2422, 2922
ApoI RAATTY 6 cut(s) 1402, 1737, 1774, 1949, 2167, 2390
ArsI GACNNNNNNTTYG 2 cut(s) 1055, 1087
Asp700I GAANNNNTTC 2 cut(s) 580, 1935
Asp718I GGTACC 1 cut(s) 1298
AspS9I GGNCC 5 cut(s) 241, 790, 1226, 1442, 1492
AsuC2I CCSGG 1 cut(s) 370
AsuHPI GGTGA 4 cut(s) 422, 1013, 1403, 1558
AsuII TTCGAA 1 cut(s) 1530
AsuNHI GCTAGC 1 cut(s) 1408
AvaII GGWCC 4 cut(s) 241, 1226, 1442, 1492
AxyI CCTNAGG 1 cut(s) 1606
BaeGI GKGCMC 1 cut(s) 2455
BalI TGGCCA 3 cut(s) 152, 648, 3008
BanI GGYRCC 3 cut(s) 1298, 2310, 2452
BanII GRGCYC 1 cut(s) 1979
BauI CACGAG 1 cut(s) 1118
BbvI GCAGC 4 cut(s) 360, 1071, 2409, 2934
BciT130I CCWGG 6 cut(s) 12, 166, 198, 783, 935, 2448
BclI TGATCA 2 cut(s) 2968, 3132
BcnI CCSGG 1 cut(s) 370
BcoDI GTCTC 4 cut(s) 1391, 1641, 2110, 2800
BfaI CTAG 8 cut(s) 260, 752, 930, 1199, 1409, 1484, 2411, 3086
BfmI CTRYAG 3 cut(s) 620, 1314, 3030
BfrI CTTAAG 1 cut(s) 1678
BglII AGATCT 1 cut(s) 2131
BisI GCNGC 6 cut(s) 211, 214, 374, 1085, 2423, 2923
BlsI GCNGC 6 cut(s) 212, 215, 375, 1086, 2424, 2924
BmcAI AGTACT 1 cut(s) 2247
Bme1390I CCNGG 7 cut(s) 12, 166, 198, 370, 783, 935, 2448
Bme18I GGWCC 4 cut(s) 241, 1226, 1442, 1492
BmgBI CACGTC 2 cut(s) 2509, 3065
BmgT120I GGNCC 5 cut(s) 241, 790, 1226, 1442, 1492
BmrFI CCNGG 7 cut(s) 12, 166, 198, 370, 783, 935, 2448
BmrI ACTGGG 1 cut(s) 1142
BmsI GCATC 6 cut(s) 585, 884, 961, 1795, 2638, 2781
BmtI GCTAGC 1 cut(s) 1412
BmuI ACTGGG 1 cut(s) 1142
BplI GAGNNNNNCTC 4 cut(s) 1621, 1653, 2121, 2153
BpmI CTGGAG 1 cut(s) 333
Bpu14I TTCGAA 1 cut(s) 1530
BpuEI CTTGAG 1 cut(s) 313
BpuMI CCSGG 1 cut(s) 370
BsaI GGTCTC 2 cut(s) 2110, 2800
BsaJI CCNNGG 7 cut(s) 10, 388, 570, 643, 1560, 1940, 2447
BsaWI WCCGGW 4 cut(s) 418, 917, 1162, 2896
Bsc4I CCNNNNNNNGG 9 cut(s) 284, 356, 572, 788, 1388, 1820, 2726, 2785, 3091
Bse118I RCCGGY 1 cut(s) 255
Bse1I ACTGG 7 cut(s) 649, 857, 972, 1137, 1519, 2803, 3109
Bse21I CCTNAGG 1 cut(s) 1606
Bse3DI GCAATG 3 cut(s) 1131, 2496, 2864
BseBI CCWGG 6 cut(s) 12, 166, 198, 783, 935, 2448
BseDI CCNNGG 7 cut(s) 10, 388, 570, 643, 1560, 1940, 2447
BseLI CCNNNNNNNGG 9 cut(s) 284, 356, 572, 788, 1388, 1820, 2726, 2785, 3091
BseMI GCAATG 3 cut(s) 1131, 2496, 2864
BseMII CTCAG 6 cut(s) 316, 1111, 1563, 1631, 1901, 2177
BseNI ACTGG 7 cut(s) 649, 857, 972, 1137, 1519, 2803, 3109
BseRI GAGGAG 3 cut(s) 102, 1092, 2126
BseSI GKGCMC 1 cut(s) 2455
BseX3I CGGCCG 1 cut(s) 211
BseXI GCAGC 4 cut(s) 360, 1071, 2409, 2934
BseYI CCCAGC 1 cut(s) 2576
Bsh1236I CGCG 1 cut(s) 2877
Bsh1285I CGRYCG 1 cut(s) 214
BshFI GGCC 7 cut(s) 152, 196, 213, 648, 792, 3008, 3140
BshNI GGYRCC 3 cut(s) 1298, 2310, 2452
BsiEI CGRYCG 1 cut(s) 214
BsiSI CCGG 6 cut(s) 256, 370, 419, 918, 1163, 2897
BslFI GGGAC 2 cut(s) 352, 1428
BslI CCNNNNNNNGG 9 cut(s) 284, 356, 572, 788, 1388, 1820, 2726, 2785, 3091
BsmAI GTCTC 4 cut(s) 1391, 1641, 2110, 2800
BsmFI GGGAC 2 cut(s) 352, 1428
BsmI GAATGC 3 cut(s) 1158, 1400, 1593
BsnI GGCC 7 cut(s) 152, 196, 213, 648, 792, 3008, 3140
Bso31I GGTCTC 2 cut(s) 2110, 2800
Bsp119I TTCGAA 1 cut(s) 1530
Bsp1286I GDGCHC 2 cut(s) 1979, 2455
Bsp1407I TGTACA 1 cut(s) 2199
Bsp143I GATC 8 cut(s) 248, 1417, 1564, 1695, 2131, 2893, 2968, 3132
Bsp19I CCATGG 1 cut(s) 1940
BspACI CCGC 7 cut(s) 210, 214, 448, 1152, 1440, 1945, 3049
BspANI GGCC 7 cut(s) 152, 196, 213, 648, 792, 3008, 3140
BspCNI CTCAG 6 cut(s) 315, 1110, 1564, 1632, 1900, 2176
BspFNI CGCG 1 cut(s) 2877
BspHI TCATGA 2 cut(s) 1461, 2394
BspMAI CTGCAG 2 cut(s) 624, 3034
BspOI GCTAGC 1 cut(s) 1412
BspPI GGATC 4 cut(s) 1425, 1572, 1703, 2888
BspT104I TTCGAA 1 cut(s) 1530
BspT107I GGYRCC 3 cut(s) 1298, 2310, 2452
BspTI CTTAAG 1 cut(s) 1678
BspTNI GGTCTC 2 cut(s) 2110, 2800
BsrBI CCGCTC 1 cut(s) 3049
BsrDI GCAATG 3 cut(s) 1131, 2496, 2864
BsrFI RCCGGY 1 cut(s) 255
BsrGI TGTACA 1 cut(s) 2199
BsrI ACTGG 7 cut(s) 649, 857, 972, 1137, 1519, 2803, 3109
BssAI RCCGGY 1 cut(s) 255
BssECI CCNNGG 7 cut(s) 10, 388, 570, 643, 1560, 1940, 2447
BssMI GATC 8 cut(s) 248, 1417, 1564, 1695, 2131, 2893, 2968, 3132
BssNAI GTATAC 1 cut(s) 1883
BssSI CACGAG 1 cut(s) 1118
BssT1I CCWWGG 5 cut(s) 388, 570, 643, 1560, 1940
Bst1107I GTATAC 1 cut(s) 1883
Bst2BI CACGAG 1 cut(s) 1118
Bst2UI CCWGG 6 cut(s) 12, 166, 198, 783, 935, 2448
Bst4CI ACNGT 7 cut(s) 108, 235, 799, 1263, 1843, 1998, 2338
Bst6I CTCTTC 7 cut(s) 594, 733, 780, 916, 1024, 2164, 2409
BstAFI CTTAAG 1 cut(s) 1678
BstAPI GCANNNNNTGC 1 cut(s) 207
BstAUI TGTACA 1 cut(s) 2199
BstBI TTCGAA 1 cut(s) 1530
BstC8I GCNNGC 3 cut(s) 117, 257, 1410
BstDSI CCRYGG 1 cut(s) 1940
BstFNI CGCG 1 cut(s) 2877
BstKTI GATC 8 cut(s) 251, 1420, 1567, 1698, 2134, 2896, 2971, 3135
BstMAI GTCTC 4 cut(s) 1391, 1641, 2110, 2800
BstMBI GATC 8 cut(s) 248, 1417, 1564, 1695, 2131, 2893, 2968, 3132
BstMCI CGRYCG 1 cut(s) 214
BstMWI GCNNNNNNNGC 9 cut(s) 125, 158, 207, 604, 1731, 2615, 2706, 3029, 3046
BstNI CCWGG 6 cut(s) 12, 166, 198, 783, 935, 2448
BstSCI CCNGG 7 cut(s) 10, 164, 196, 368, 781, 933, 2446
BstSFI CTRYAG 3 cut(s) 620, 1314, 3030
BstSLI GKGCMC 1 cut(s) 2455
BstUI CGCG 1 cut(s) 2877
BstV1I GCAGC 4 cut(s) 360, 1071, 2409, 2934
BstX2I RGATCY 3 cut(s) 1417, 1564, 2131
BstXI CCANNNNNNTGG 3 cut(s) 1514, 1750, 2509
BstYI RGATCY 3 cut(s) 1417, 1564, 2131
BstZ17I GTATAC 1 cut(s) 1883
BstZI CGGCCG 1 cut(s) 211
Bsu36I CCTNAGG 1 cut(s) 1606
BsuRI GGCC 7 cut(s) 152, 196, 213, 648, 792, 3008, 3140
BtgI CCRYGG 1 cut(s) 1940
BtrI CACGTC 2 cut(s) 2509, 3065
BtsI GCAGTG 2 cut(s) 2244, 2679
BtsIMutI CAGTG 6 cut(s) 795, 850, 1066, 1130, 2244, 2679
Cac8I GCNNGC 3 cut(s) 117, 257, 1410
CciI TCATGA 2 cut(s) 1461, 2394
CciNI GCGGCCGC 1 cut(s) 211
Cfr10I RCCGGY 1 cut(s) 255
Cfr13I GGNCC 5 cut(s) 241, 790, 1226, 1442, 1492
CseI GACGC 1 cut(s) 1996
Csp6I GTAC 7 cut(s) 524, 1196, 1299, 2200, 2246, 2638, 3098
CspCI CAANNNNNGTGG 4 cut(s) 552, 587, 1101, 1136
CviQI GTAC 7 cut(s) 524, 1196, 1299, 2200, 2246, 2638, 3098
DpnI GATC 8 cut(s) 250, 1419, 1566, 1697, 2133, 2895, 2970, 3134
DpnII GATC 8 cut(s) 248, 1417, 1564, 1695, 2131, 2893, 2968, 3132
DraI TTTAAA 2 cut(s) 124, 549
DrdI GACNNNNNNGTC 1 cut(s) 1633
DseDI GACNNNNNNGTC 1 cut(s) 1633
EaeI YGGCCR 4 cut(s) 150, 211, 646, 3006
EagI CGGCCG 1 cut(s) 211
Eam1104I CTCTTC 7 cut(s) 594, 733, 780, 916, 1024, 2164, 2409
EarI CTCTTC 7 cut(s) 594, 733, 780, 916, 1024, 2164, 2409
EciI GGCGGA 1 cut(s) 1960
EclXI CGGCCG 1 cut(s) 211
Eco130I CCWWGG 5 cut(s) 388, 570, 643, 1560, 1940
Eco24I GRGCYC 1 cut(s) 1979
Eco31I GGTCTC 2 cut(s) 2110, 2800
Eco32I GATATC 3 cut(s) 1057, 1171, 1705
Eco47I GGWCC 4 cut(s) 241, 1226, 1442, 1492
Eco52I CGGCCG 1 cut(s) 211
Eco57I CTGAAG 3 cut(s) 388, 503, 575
Eco81I CCTNAGG 1 cut(s) 1606
EcoO109I RGGNCCY 1 cut(s) 1226
EcoRI GAATTC 2 cut(s) 1737, 2390
EcoRII CCWGG 6 cut(s) 10, 164, 196, 781, 933, 2446
EcoRV GATATC 3 cut(s) 1057, 1171, 1705
EcoT14I CCWWGG 5 cut(s) 388, 570, 643, 1560, 1940
EcoT22I ATGCAT 1 cut(s) 877
EcoT38I GRGCYC 1 cut(s) 1979
ErhI CCWWGG 5 cut(s) 388, 570, 643, 1560, 1940
FaqI GGGAC 2 cut(s) 352, 1428
FauNDI CATATG 4 cut(s) 1542, 2125, 2752, 3129
FbaI TGATCA 2 cut(s) 2968, 3132
FblI GTMKAC 2 cut(s) 268, 1882
Fnu4HI GCNGC 6 cut(s) 211, 214, 374, 1085, 2423, 2923
FriOI GRGCYC 1 cut(s) 1979
Fsp4HI GCNGC 6 cut(s) 211, 214, 374, 1085, 2423, 2923
FspBI CTAG 8 cut(s) 260, 752, 930, 1199, 1409, 1484, 2411, 3086
GluI GCNGC 6 cut(s) 211, 214, 374, 1085, 2423, 2923
GsaI CCCAGC 1 cut(s) 2580
GsuI CTGGAG 1 cut(s) 333
HaeIII GGCC 7 cut(s) 152, 196, 213, 648, 792, 3008, 3140
HapII CCGG 6 cut(s) 256, 370, 419, 918, 1163, 2897
HgaI GACGC 1 cut(s) 1996
HincII GTYRAC 2 cut(s) 424, 2082
HindII GTYRAC 2 cut(s) 424, 2082
HindIII AAGCTT 1 cut(s) 2376
HpaI GTTAAC 1 cut(s) 2082
HpaII CCGG 6 cut(s) 256, 370, 419, 918, 1163, 2897
HphI GGTGA 4 cut(s) 422, 1013, 1403, 1558
Hpy99I CGWCG 2 cut(s) 2510, 2815
HpyCH4III ACNGT 7 cut(s) 108, 235, 799, 1263, 1843, 1998, 2338
HpyCH4IV ACGT 5 cut(s) 433, 2508, 2583, 2640, 3064
HpyF10VI GCNNNNNNNGC 9 cut(s) 125, 158, 207, 604, 1731, 2615, 2706, 3029, 3046
HpySE526I ACGT 5 cut(s) 433, 2508, 2583, 2640, 3064
KpnI GGTACC 1 cut(s) 1302
KroI GCCGGC 1 cut(s) 255
KroNI GCCGGC 1 cut(s) 257
Ksp22I TGATCA 2 cut(s) 2968, 3132
KspAI GTTAAC 1 cut(s) 2082
Kzo9I GATC 8 cut(s) 248, 1417, 1564, 1695, 2131, 2893, 2968, 3132
LmnI GCTCC 3 cut(s) 450, 1755, 2705
Lsp1109I GCAGC 4 cut(s) 360, 1071, 2409, 2934
LweI GCATC 6 cut(s) 585, 884, 961, 1795, 2638, 2781
MaeI CTAG 8 cut(s) 260, 752, 930, 1199, 1409, 1484, 2411, 3086
MaeII ACGT 5 cut(s) 433, 2508, 2583, 2640, 3064
MaeIII GTNAC 8 cut(s) 64, 229, 392, 680, 1001, 1061, 1479, 1890
MalI GATC 8 cut(s) 250, 1419, 1566, 1697, 2133, 2895, 2970, 3134
MbiI CCGCTC 1 cut(s) 3049
MboI GATC 8 cut(s) 248, 1417, 1564, 1695, 2131, 2893, 2968, 3132
MfeI CAATTG 1 cut(s) 1895
MflI RGATCY 3 cut(s) 1417, 1564, 2131
MhlI GDGCHC 2 cut(s) 1979, 2455
MlsI TGGCCA 3 cut(s) 152, 648, 3008
MluI ACGCGT 1 cut(s) 2875
MluNI TGGCCA 3 cut(s) 152, 648, 3008
MlyI GAGTC 1 cut(s) 237
MmeI TCCRAC 6 cut(s) 219, 537, 903, 1470, 1938, 2766
Mox20I TGGCCA 3 cut(s) 152, 648, 3008
Mph1103I ATGCAT 1 cut(s) 877
MroNI GCCGGC 1 cut(s) 255
MroXI GAANNNNTTC 2 cut(s) 580, 1935
MscI TGGCCA 3 cut(s) 152, 648, 3008
MslI CAYNNNNRTG 3 cut(s) 186, 746, 2507
Msp20I TGGCCA 3 cut(s) 152, 648, 3008
MspCI CTTAAG 1 cut(s) 1678
MspI CCGG 6 cut(s) 256, 370, 419, 918, 1163, 2897
MspR9I CCNGG 7 cut(s) 12, 166, 198, 370, 783, 935, 2448
MunI CAATTG 1 cut(s) 1895
Mva1269I GAATGC 3 cut(s) 1158, 1400, 1593
MvaI CCWGG 6 cut(s) 12, 166, 198, 783, 935, 2448
MvnI CGCG 1 cut(s) 2877
MwoI GCNNNNNNNGC 9 cut(s) 125, 158, 207, 604, 1731, 2615, 2706, 3029, 3046
NaeI GCCGGC 1 cut(s) 257
NciI CCSGG 1 cut(s) 370
NcoI CCATGG 1 cut(s) 1940
NdeI CATATG 4 cut(s) 1542, 2125, 2752, 3129
NdeII GATC 8 cut(s) 248, 1417, 1564, 1695, 2131, 2893, 2968, 3132
NgoMIV GCCGGC 1 cut(s) 255
NheI GCTAGC 1 cut(s) 1408
NmeAIII GCCGAG 1 cut(s) 3066
NmuCI GTSAC 5 cut(s) 64, 229, 1001, 1061, 1479
NotI GCGGCCGC 1 cut(s) 211
NsiI ATGCAT 1 cut(s) 877
NspV TTCGAA 1 cut(s) 1530
OliI CACNNNNGTG 1 cut(s) 186
PagI TCATGA 2 cut(s) 1461, 2394
PcsI WCGNNNNNNNCGW 1 cut(s) 1704
PctI GAATGC 3 cut(s) 1158, 1400, 1593
PdiI GCCGGC 1 cut(s) 257
PdmI GAANNNNTTC 2 cut(s) 580, 1935
PflMI CCANNNNNTGG 2 cut(s) 356, 2726
PfoI TCCNGGA 1 cut(s) 164
PkrI GCNGC 6 cut(s) 212, 215, 375, 1086, 2424, 2924
PleI GAGTC 1 cut(s) 236
PpsI GAGTC 1 cut(s) 236
PpuMI RGGWCCY 1 cut(s) 1226
Psp1406I AACGTT 1 cut(s) 2583
Psp5II RGGWCCY 1 cut(s) 1226
Psp6I CCWGG 6 cut(s) 10, 164, 196, 781, 933, 2446
PspFI CCCAGC 1 cut(s) 2576
PspGI CCWGG 6 cut(s) 10, 164, 196, 781, 933, 2446
PspPI GGNCC 5 cut(s) 241, 790, 1226, 1442, 1492
PspPPI RGGWCCY 1 cut(s) 1226
PstI CTGCAG 2 cut(s) 624, 3034
PsuI RGATCY 3 cut(s) 1417, 1564, 2131
RsaI GTAC 7 cut(s) 525, 1197, 1300, 2201, 2247, 2639, 3099
RsaNI GTAC 7 cut(s) 524, 1196, 1299, 2200, 2246, 2638, 3098
RseI CAYNNNNRTG 3 cut(s) 186, 746, 2507
SatI GCNGC 6 cut(s) 211, 214, 374, 1085, 2423, 2923
Sau3AI GATC 8 cut(s) 248, 1417, 1564, 1695, 2131, 2893, 2968, 3132
Sau96I GGNCC 5 cut(s) 241, 790, 1226, 1442, 1492
ScaI AGTACT 1 cut(s) 2247
SchI GAGTC 1 cut(s) 237
ScrFI CCNGG 7 cut(s) 12, 166, 198, 370, 783, 935, 2448
SduI GDGCHC 2 cut(s) 1979, 2455
SfaNI GCATC 6 cut(s) 585, 884, 961, 1795, 2638, 2781
SfcI CTRYAG 3 cut(s) 620, 1314, 3030
SfuI TTCGAA 1 cut(s) 1530
SinI GGWCC 4 cut(s) 241, 1226, 1442, 1492
SmiI ATTTAAAT 1 cut(s) 549
SmiMI CAYNNNNRTG 3 cut(s) 186, 746, 2507
SmlI CTYRAG 2 cut(s) 292, 1678
SmoI CTYRAG 2 cut(s) 292, 1678
SsiI CCGC 7 cut(s) 210, 214, 448, 1152, 1440, 1945, 3049
SspI AATATT 1 cut(s) 1935
SspMI CTAG 8 cut(s) 260, 752, 930, 1199, 1409, 1484, 2411, 3086
StyD4I CCNGG 7 cut(s) 10, 164, 196, 368, 781, 933, 2446
StyI CCWWGG 5 cut(s) 388, 570, 643, 1560, 1940
SwaI ATTTAAAT 1 cut(s) 549
TaaI ACNGT 7 cut(s) 108, 235, 799, 1263, 1843, 1998, 2338
TaiI ACGT 5 cut(s) 436, 2511, 2586, 2643, 3067
TaqI TCGA 8 cut(s) 318, 813, 1520, 1530, 1698, 1707, 2139, 2505
TaqII GACCGA 1 cut(s) 2824
TatI WGTACW 3 cut(s) 2199, 2245, 3097
TauI GCSGC 2 cut(s) 213, 216
TscAI CASTG 6 cut(s) 802, 850, 1066, 1137, 2244, 2686
TseFI GTSAC 5 cut(s) 64, 229, 1001, 1061, 1479
TseI GCWGC 4 cut(s) 373, 1084, 2422, 2922
Tsp45I GTSAC 5 cut(s) 64, 229, 1001, 1061, 1479
TspGWI ACGGA 3 cut(s) 852, 1751, 2828
TspRI CASTG 6 cut(s) 802, 850, 1066, 1137, 2244, 2686
Van91I CCANNNNNTGG 2 cut(s) 356, 2726
Vha464I CTTAAG 1 cut(s) 1678
VpaK11BI GGWCC 4 cut(s) 241, 1226, 1442, 1492
XapI RAATTY 6 cut(s) 1402, 1737, 1774, 1949, 2167, 2390
XbaI TCTAGA 1 cut(s) 2410
XcmI CCANNNNNNNNNTGG 1 cut(s) 1586
XmiI GTMKAC 2 cut(s) 268, 1882
XmnI GAANNNNTTC 2 cut(s) 580, 1935
XspI CTAG 8 cut(s) 260, 752, 930, 1199, 1409, 1484, 2411, 3086
ZrmI AGTACT 1 cut(s) 2247
Zsp2I ATGCAT 1 cut(s) 877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.