RLG00000026744
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
5582833 .. 5585100
2268 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026744

Sequence Viewer

Length: 2160 bp
ATGAGCAATGCCACTAATCTAGCGTTCTTTGAGGTTATAGGTAATAAACTAACAGGGCAAGTGCCAAATTTACAAAAGCTTCGTAGCCTTGTGAAATTCCAAATTGCTGGTAATCATCTCGGAAGTGGCAGTGATGGGGACTTAAGCTTTTTCTCAGGCTTGACCAATGCTACACAGTTGAAGTGGTTAGTTATAGCATTCAACAATTTCGGAGGGACGTTGCCCACATCAATATCCAATCTCTCAACCAACCTTGCAGTTCTCGTTGTTTTCAAAAACCAATTACATGGAAGCATCCCTGCAGGGATAGTGAATCTGGTCAACATGGGATCATTGGTTTTGTCTGATAACATGTTCACAGGTAACATTCCCACTGACATCGGGAAACTTTCAAGTCTTGGGAGATTGCATTTTGATTTCAACAGATTATCAGGGAGCCTCCCATCCTCTCTAGGAAATCTGACATCATTAGTTGATCTCGAATTGCAAGGAAATACTTTTAATGGCACCATCCCTACAAGCCTTGGGGAATGCCATTCATTGCTGATGTTGGATCTTTCTCGCAATAATCTTAGTGGCGACATACCTCCACCAGTTATTTTTATTACTTCCTTATCAGTGTATTTGGACTTGTCTGAAAATCTTCTCACTGGTTCCCTTCCCTTGGAGGTAGGAAAGTTAAAAAATCTAGGTGAGTTGTATGTCTTTAATAATATGTTATCAGGAAAACTTCCTAGTAGCCTTGGTAGTTGCCAGAGTTTAGAAGTCTTGAACTTGCAAGATAACTTCTTTGAAGGCCCGATTCCCTCGGCTATGGCCTCCTTGAGAGGGATTCAAGAGTTAGACCTTTCACGCAACAATCTCTCCGGTGAAATTCCTGAATTTCTGGCGGGGTTTGGAGGCTTGAAGCAACTTAACCTGTCTTTCAATGACTTTTGGGGTGCAGTGCCAGTTAAAGGTGTCTTTAACAACGCAAGTGCCACTTCAGTTGTTGGAAATAGTAGGCTCTGTGGAGGTATCTCTGCTCTCCGCCTTCCAAAGTGCAAGTCTAAAGAATTGACGTCTCGTAGCATGAAACTAACAATCTTATTAGTATCAGCATTCACTCTTCTTGGAATAGCTATGCTGCTGACATTTCTGTTTCTTTGTTTCTCCAAAAAGAAATGCAAAGCAACTTCATCAAGCACATTTGCGGACTCTATTTTGCAAGTGTCCTATAATACTCTCTTGAAAGCTACTGATGGCTTCTCTGCAACAAATTTGATTGGAGCGGGTAGTTTTGGGTCTGTCTACAAAGGAGTTCTCGGCGAAGATGGAGCTCAGGTTGTTGCTGTGAAGGTGTTTAACATGTTACGCCGGGGAGCTTCCAAGAGTTTCCTAGCCGAATGTGAGGCACTCAGAAATATCAGACACCGAAATCTAGTCCCGATTATAACTGCATGTTCGAGTGTTGACTCTAGTGGCAATGATTTCAAGGCTTTGGTTTATAAGTTCATGGAGAATGGGAGCTTAGAGGAGTGGCTGCAACCAACTACTGAGATAGAAGAGGCACCGAAGAATTTAAGTCTTGTTCAGAGGCTAGAAATTGCGATTGACGTCGCTTGTGCACTGGATTATCTTCATAATCATTGCGAAACACCAATAGTTCATTGTGACCTCAAGCCGAGCAATGTTCTTTTGGACAATGACTTGACTGGACATGTTGCTGACTTTGGATTAGCTAGATTCCTCTCAAGACTAGCCGATAACGTTTCAGCAAATCAATCAAGTTCCATTGGAATAAGAGGGACTGTTGGTTATGCTGCTCCAGAGTATGGAATGGGAAGTGAGTTGTCAACATATGGAGATGTCTACAGCTTCGGCATTCTCTTGTTAGAGATGTTTACAGGGAAGAGACCCACCGACCACATGTTCGTGGACGGTTTGAACCTTCACAAGTTTGTAAAAAGGGCTTTCCCCGAGCGTGTTTCAGAGATTGCAGATTCATCACTTGTTCAAGTAGGCAAACCCAGCCAGAGCACCAATGATGCTCTTGAGGAATGCTTGAGTTCAATACTGGGAATTGGAGTTGCATGCTCTGTAGAATCCCCAACAGACCGAGAGAATATCGGTGATGCTGTATCTGAACTGAAAAGCATTCGAGCCACTCTTGTTGGATAG

Protein Analysis

720

Amino Acids

77.02

Weight (kDa)

5.75

Isoelectric Point (pI)

35.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 98 - 186 6e-06 Leucine-rich repeat region
LRR_14 PF23598 174 - 306 3.9e-06 Leucine-rich repeat region
LRR_8 PF13855 253 - 312 8.8e-08 Leucine rich repeat
Pkinase PF00069 418 - 682 5.5e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 419 - 637 5.9e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1433, 1488
AatII GACGTC 2 cut(s) 1064, 1599
AccB1I GGYRCC 2 cut(s) 506, 1549
AccB7I CCANNNNNTGG 1 cut(s) 1814
AccBSI CCGCTC 1 cut(s) 1271
AccI GTMKAC 2 cut(s) 1290, 1851
AciI CCGC 4 cut(s) 890, 1030, 1193, 1271
AclI AACGTT 1 cut(s) 1749
AclWI GGATC 2 cut(s) 337, 561
AcsI RAATTY 6 cut(s) 67, 95, 873, 881, 1258, 1558
AcuI CTGAAG 1 cut(s) 969
AcyI GRCGYC 2 cut(s) 1061, 1596
AfiI CCNNNNNNNGG 4 cut(s) 664, 828, 956, 1814
AflII CTTAAG 1 cut(s) 142
AflIII ACRYGT 4 cut(s) 351, 1347, 1699, 1908
AluBI AGCT 9 cut(s) 79, 147, 1121, 1235, 1319, 1364, 1509, 1721, 1857
AluI AGCT 9 cut(s) 79, 147, 1121, 1235, 1319, 1364, 1509, 1721, 1857
Alw21I GWGCWC 3 cut(s) 1321, 1609, 2021
Alw26I GTCTC 2 cut(s) 1068, 1888
Alw44I GTGCAC 1 cut(s) 1605
AlwI GGATC 2 cut(s) 337, 561
Ama87I CYCGRG 1 cut(s) 1958
AoxI GGCC 2 cut(s) 796, 816
ApaLI GTGCAC 1 cut(s) 1605
ApeKI GCWGC 3 cut(s) 1126, 1522, 1802
ApoI RAATTY 6 cut(s) 67, 95, 873, 881, 1258, 1558
ArsI GACNNNNNNTTYG 4 cut(s) 1031, 1063, 1895, 1927
Asp700I GAANNNNTTC 1 cut(s) 642
AspS9I GGNCC 1 cut(s) 797
AsuC2I CCSGG 1 cut(s) 1358
AsuHPI GGTGA 3 cut(s) 704, 881, 2123
AvaI CYCGRG 1 cut(s) 1958
BaeGI GKGCMC 1 cut(s) 1609
BanI GGYRCC 2 cut(s) 506, 1549
BanII GRGCYC 1 cut(s) 1321
Bbv12I GWGCWC 3 cut(s) 1321, 1609, 2021
BbvI GCAGC 3 cut(s) 1113, 1509, 1789
BccI CCATC 5 cut(s) 128, 451, 518, 1235, 1307
BcnI CCSGG 1 cut(s) 1358
BcoDI GTCTC 2 cut(s) 1068, 1888
BfmI CTRYAG 3 cut(s) 300, 1852, 2079
BfrI CTTAAG 1 cut(s) 142
BisI GCNGC 3 cut(s) 1127, 1523, 1803
BlsI GCNGC 3 cut(s) 1128, 1524, 1804
Bme1390I CCNGG 1 cut(s) 1358
BmeT110I CYCGRG 1 cut(s) 1958
BmgT120I GGNCC 1 cut(s) 797
BmiI GGNNCC 4 cut(s) 437, 508, 655, 1551
BmrFI CCNGG 1 cut(s) 1358
BmrI ACTGGG 1 cut(s) 2066
BmsI GCATC 3 cut(s) 303, 2017, 2104
BmuI ACTGGG 1 cut(s) 2066
BpmI CTGGAG 1 cut(s) 1791
Bpu10I CCTNAGC 1 cut(s) 1320
BpuEI CTTGAG 5 cut(s) 844, 1643, 1717, 2054, 2065
BpuMI CCSGG 1 cut(s) 1358
BsaHI GRCGYC 2 cut(s) 1061, 1596
BsaI GGTCTC 1 cut(s) 1888
BsaJI CCNNGG 5 cut(s) 523, 663, 742, 807, 1357
BsaWI WCCGGW 1 cut(s) 866
BsaXI ACNNNNNCTCC 4 cut(s) 848, 878, 1308, 1338
Bsc4I CCNNNNNNNGG 4 cut(s) 664, 828, 956, 1814
Bse1I ACTGG 6 cut(s) 593, 655, 950, 1614, 1699, 2061
Bse3DI GCAATG 5 cut(s) 13, 539, 1471, 1627, 1675
BseDI CCNNGG 5 cut(s) 523, 663, 742, 807, 1357
BseGI GGATG 3 cut(s) 294, 443, 510
BseLI CCNNNNNNNGG 4 cut(s) 664, 828, 956, 1814
BseMI GCAATG 5 cut(s) 13, 539, 1471, 1627, 1675
BseMII CTCAG 4 cut(s) 168, 1334, 1411, 1527
BseNI ACTGG 6 cut(s) 593, 655, 950, 1614, 1699, 2061
BseRI GAGGAG 1 cut(s) 1529
BseSI GKGCMC 1 cut(s) 1609
BseXI GCAGC 3 cut(s) 1113, 1509, 1789
BseYI CCCAGC 1 cut(s) 2009
BsgI GTGCAG 1 cut(s) 963
BshFI GGCC 2 cut(s) 798, 818
BshNI GGYRCC 2 cut(s) 506, 1549
BsiHKAI GWGCWC 3 cut(s) 1321, 1609, 2021
BsiHKCI CYCGRG 1 cut(s) 1958
BsiSI CCGG 2 cut(s) 867, 1357
BslFI GGGAC 4 cut(s) 152, 229, 1409, 1801
BslI CCNNNNNNNGG 4 cut(s) 664, 828, 956, 1814
BsmAI GTCTC 2 cut(s) 1068, 1888
BsmBI CGTCTC 1 cut(s) 1068
BsmFI GGGAC 4 cut(s) 152, 229, 1409, 1801
BsmI GAATGC 6 cut(s) 197, 536, 1100, 1863, 2045, 2136
BsnI GGCC 2 cut(s) 798, 818
Bso31I GGTCTC 1 cut(s) 1888
BsoBI CYCGRG 1 cut(s) 1958
Bsp1286I GDGCHC 3 cut(s) 1321, 1609, 2021
Bsp143I GATC 3 cut(s) 329, 475, 553
BspACI CCGC 4 cut(s) 890, 1030, 1193, 1271
BspANI GGCC 2 cut(s) 798, 818
BspCNI CTCAG 4 cut(s) 167, 1333, 1410, 1528
BspLI GGNNCC 4 cut(s) 437, 508, 655, 1551
BspMAI CTGCAG 1 cut(s) 304
BspPI GGATC 2 cut(s) 337, 561
BspT107I GGYRCC 2 cut(s) 506, 1549
BspTI CTTAAG 1 cut(s) 142
BspTNI GGTCTC 1 cut(s) 1888
BsrBI CCGCTC 1 cut(s) 1271
BsrDI GCAATG 5 cut(s) 13, 539, 1471, 1627, 1675
BsrI ACTGG 6 cut(s) 593, 655, 950, 1614, 1699, 2061
BssECI CCNNGG 5 cut(s) 523, 663, 742, 807, 1357
BssMI GATC 3 cut(s) 329, 475, 553
BssNI GRCGYC 2 cut(s) 1061, 1596
BssT1I CCWWGG 3 cut(s) 523, 663, 742
Bst4CI ACNGT 3 cut(s) 177, 1792, 1922
Bst6I CTCTTC 3 cut(s) 1113, 1539, 1886
BstACI GRCGYC 2 cut(s) 1061, 1596
BstAFI CTTAAG 1 cut(s) 142
BstC8I GCNNGC 1 cut(s) 2074
BstDEI CTNAG 6 cut(s) 154, 572, 1320, 1397, 1510, 1536
BstF5I GGATG 3 cut(s) 294, 443, 510
BstKTI GATC 3 cut(s) 332, 478, 556
BstMAI GTCTC 2 cut(s) 1068, 1888
BstMBI GATC 3 cut(s) 329, 475, 553
BstMWI GCNNNNNNNGC 1 cut(s) 2010
BstNSI RCATGY 6 cut(s) 355, 1351, 1443, 1703, 1912, 2076
BstSCI CCNGG 1 cut(s) 1356
BstSFI CTRYAG 3 cut(s) 300, 1852, 2079
BstSLI GKGCMC 1 cut(s) 1609
BstV1I GCAGC 3 cut(s) 1113, 1509, 1789
BstX2I RGATCY 1 cut(s) 553
BstXI CCANNNNNNTGG 2 cut(s) 107, 287
BstYI RGATCY 1 cut(s) 553
BsuRI GGCC 2 cut(s) 798, 818
BtsCI GGATG 3 cut(s) 294, 443, 510
BtsI GCAGTG 2 cut(s) 136, 951
BtsIMutI CAGTG 6 cut(s) 136, 372, 624, 648, 951, 1607
Cac8I GCNNGC 1 cut(s) 2074
Cfr13I GGNCC 1 cut(s) 797
CspCI CAANNNNNGTGG 3 cut(s) 970, 1005, 2134
DdeI CTNAG 6 cut(s) 154, 572, 1320, 1397, 1510, 1536
DpnI GATC 3 cut(s) 331, 477, 555
DpnII GATC 3 cut(s) 329, 475, 553
Eam1104I CTCTTC 3 cut(s) 1113, 1539, 1886
EarI CTCTTC 3 cut(s) 1113, 1539, 1886
EciI GGCGGA 1 cut(s) 1019
Ecl136II GAGCTC 1 cut(s) 1319
Eco130I CCWWGG 3 cut(s) 523, 663, 742
Eco24I GRGCYC 1 cut(s) 1321
Eco31I GGTCTC 1 cut(s) 1888
Eco53kI GAGCTC 1 cut(s) 1319
Eco57I CTGAAG 1 cut(s) 969
Eco88I CYCGRG 1 cut(s) 1958
EcoICRI GAGCTC 1 cut(s) 1319
EcoT14I CCWWGG 3 cut(s) 523, 663, 742
EcoT38I GRGCYC 1 cut(s) 1321
ErhI CCWWGG 3 cut(s) 523, 663, 742
Esp3I CGTCTC 1 cut(s) 1068
FalI AAGNNNNNCTT 2 cut(s) 967, 999
FaqI GGGAC 4 cut(s) 152, 229, 1409, 1801
FauI CCCGC 2 cut(s) 883, 1264
FauNDI CATATG 1 cut(s) 1840
FblI GTMKAC 2 cut(s) 1290, 1851
Fnu4HI GCNGC 3 cut(s) 1127, 1523, 1803
FokI GGATG 3 cut(s) 281, 430, 497
FriOI GRGCYC 1 cut(s) 1321
Fsp4HI GCNGC 3 cut(s) 1127, 1523, 1803
GluI GCNGC 3 cut(s) 1127, 1523, 1803
GsaI CCCAGC 1 cut(s) 2013
GsuI CTGGAG 1 cut(s) 1791
HaeIII GGCC 2 cut(s) 798, 818
HapII CCGG 2 cut(s) 867, 1357
Hin1I GRCGYC 2 cut(s) 1061, 1596
HincII GTYRAC 3 cut(s) 322, 1453, 1836
HindII GTYRAC 3 cut(s) 322, 1453, 1836
HindIII AAGCTT 2 cut(s) 77, 145
HinfI GANTC 8 cut(s) 313, 802, 832, 1196, 1454, 1725, 1982, 2084
HpaII CCGG 2 cut(s) 867, 1357
HphI GGTGA 3 cut(s) 704, 881, 2123
Hpy166II GTNNAC 9 cut(s) 322, 357, 1291, 1453, 1607, 1836, 1852, 1884, 1918
Hpy8I GTNNAC 9 cut(s) 322, 357, 1291, 1453, 1607, 1836, 1852, 1884, 1918
Hpy99I CGWCG 1 cut(s) 1601
HpyAV CCTTC 5 cut(s) 668, 788, 1043, 1330, 1940
HpyCH4III ACNGT 3 cut(s) 177, 1792, 1922
HpyCH4IV ACGT 4 cut(s) 218, 1061, 1596, 1749
HpyF10VI GCNNNNNNNGC 1 cut(s) 2010
HpyF3I CTNAG 6 cut(s) 154, 572, 1320, 1397, 1510, 1536
HpySE526I ACGT 4 cut(s) 218, 1061, 1596, 1749
Hsp92I GRCGYC 2 cut(s) 1061, 1596
Kzo9I GATC 3 cut(s) 329, 475, 553
LmnI GCTCC 6 cut(s) 435, 1268, 1316, 1361, 1506, 1810
Lsp1109I GCAGC 3 cut(s) 1113, 1509, 1789
LweI GCATC 3 cut(s) 303, 2017, 2104
MaeII ACGT 4 cut(s) 218, 1061, 1596, 1749
MaeIII GTNAC 3 cut(s) 362, 1350, 1652
MalI GATC 3 cut(s) 331, 477, 555
MbiI CCGCTC 1 cut(s) 1271
MboI GATC 3 cut(s) 329, 475, 553
MboII GAAGA 7 cut(s) 635, 1100, 1322, 1556, 1567, 1610, 1903
MflI RGATCY 1 cut(s) 553
MhlI GDGCHC 3 cut(s) 1321, 1609, 2021
MlyI GAGTC 2 cut(s) 1190, 1448
MmeI TCCRAC 3 cut(s) 531, 973, 2134
MroXI GAANNNNTTC 1 cut(s) 642
MseI TTAA 9 cut(s) 143, 501, 680, 708, 915, 954, 966, 1344, 1562
MslI CAYNNNNRTG 1 cut(s) 1913
MspCI CTTAAG 1 cut(s) 142
MspI CCGG 2 cut(s) 867, 1357
MspR9I CCNGG 1 cut(s) 1358
Mva1269I GAATGC 6 cut(s) 197, 536, 1100, 1863, 2045, 2136
MwoI GCNNNNNNNGC 1 cut(s) 2010
NciI CCSGG 1 cut(s) 1358
NdeI CATATG 1 cut(s) 1840
NdeII GATC 3 cut(s) 329, 475, 553
NlaIV GGNNCC 4 cut(s) 437, 508, 655, 1551
NmeAIII GCCGAG 3 cut(s) 788, 1284, 1689
NmuCI GTSAC 1 cut(s) 1652
NspI RCATGY 6 cut(s) 355, 1351, 1443, 1703, 1912, 2076
PaeI GCATGC 1 cut(s) 2076
PciI ACATGT 4 cut(s) 351, 1347, 1699, 1908
PctI GAATGC 6 cut(s) 197, 536, 1100, 1863, 2045, 2136
PdmI GAANNNNTTC 1 cut(s) 642
PfeI GAWTC 6 cut(s) 313, 802, 832, 1725, 1982, 2084
PflMI CCANNNNNTGG 1 cut(s) 1814
PkrI GCNGC 3 cut(s) 1128, 1524, 1804
PleI GAGTC 2 cut(s) 1190, 1448
PpsI GAGTC 2 cut(s) 1190, 1448
PscI ACATGT 4 cut(s) 351, 1347, 1699, 1908
PsiI TTATAA 2 cut(s) 1433, 1488
Psp124BI GAGCTC 1 cut(s) 1321
Psp1406I AACGTT 1 cut(s) 1749
PspFI CCCAGC 1 cut(s) 2009
PspN4I GGNNCC 4 cut(s) 437, 508, 655, 1551
PspPI GGNCC 1 cut(s) 797
PstI CTGCAG 1 cut(s) 304
PsuI RGATCY 1 cut(s) 553
RseI CAYNNNNRTG 1 cut(s) 1913
SacI GAGCTC 1 cut(s) 1321
SaqAI TTAA 9 cut(s) 143, 501, 680, 708, 915, 954, 966, 1344, 1562
SatI GCNGC 3 cut(s) 1127, 1523, 1803
Sau3AI GATC 3 cut(s) 329, 475, 553
Sau96I GGNCC 1 cut(s) 797
SbfI CCTGCAGG 1 cut(s) 304
SchI GAGTC 2 cut(s) 1190, 1448
ScrFI CCNGG 1 cut(s) 1358
SdaI CCTGCAGG 1 cut(s) 304
SduI GDGCHC 3 cut(s) 1321, 1609, 2021
SfaNI GCATC 3 cut(s) 303, 2017, 2104
SfcI CTRYAG 3 cut(s) 300, 1852, 2079
SmiMI CAYNNNNRTG 1 cut(s) 1913
SmlI CTYRAG 6 cut(s) 142, 823, 1658, 1732, 2033, 2044
SmoI CTYRAG 6 cut(s) 142, 823, 1658, 1732, 2033, 2044
SphI GCATGC 1 cut(s) 2076
Sse8387I CCTGCAGG 1 cut(s) 304
SsiI CCGC 4 cut(s) 890, 1030, 1193, 1271
SstI GAGCTC 1 cut(s) 1321
StyD4I CCNGG 1 cut(s) 1356
StyI CCWWGG 3 cut(s) 523, 663, 742
TaaI ACNGT 3 cut(s) 177, 1792, 1922
TaiI ACGT 4 cut(s) 221, 1064, 1599, 1752
TaqI TCGA 3 cut(s) 480, 1445, 2140
TaqII GACCGA 1 cut(s) 2112
TfiI GAWTC 6 cut(s) 313, 802, 832, 1725, 1982, 2084
Tru1I TTAA 9 cut(s) 143, 501, 680, 708, 915, 954, 966, 1344, 1562
Tru9I TTAA 9 cut(s) 143, 501, 680, 708, 915, 954, 966, 1344, 1562
TscAI CASTG 6 cut(s) 136, 379, 624, 655, 951, 1614
TseFI GTSAC 1 cut(s) 1652
TseI GCWGC 3 cut(s) 1126, 1522, 1802
Tsp45I GTSAC 1 cut(s) 1652
TspDTI ATGAA 7 cut(s) 528, 1088, 1167, 1483, 1610, 1637, 1974
TspRI CASTG 6 cut(s) 136, 379, 624, 655, 951, 1614
Van91I CCANNNNNTGG 1 cut(s) 1814
Vha464I CTTAAG 1 cut(s) 142
VneI GTGCAC 1 cut(s) 1605
XapI RAATTY 6 cut(s) 67, 95, 873, 881, 1258, 1558
XceI RCATGY 6 cut(s) 355, 1351, 1443, 1703, 1912, 2076
XmiI GTMKAC 2 cut(s) 1290, 1851
XmnI GAANNNNTTC 1 cut(s) 642
ZraI GACGTC 2 cut(s) 1062, 1597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.