Belongs to the protein kinase superfamily. Ser Thr protein kinase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRRNT_2 | PF08263 | 36 - 72 | 7.4e-10 | Leucine rich repeat N-terminal domain |
| LRR_14 | PF23598 | 80 - 299 | 2e-18 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 356 - 588 | 8.4e-06 | Leucine-rich repeat region |
| Pkinase | PF00069 | 689 - 922 | 9.7e-39 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 691 - 916 | 2.9e-37 | Protein tyrosine and serine/threonine kinase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1200, 1887 |
| AbsI | CCTCGAGG | 1 cut(s) | 1034 |
| Acc16I | TGCGCA | 1 cut(s) | 542 |
| Acc65I | GGTACC | 1 cut(s) | 2612 |
| AccB1I | GGYRCC | 3 cut(s) | 344, 2223, 2612 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2356, 2639 |
| AccI | GTMKAC | 1 cut(s) | 1798 |
| AccII | CGCG | 1 cut(s) | 2962 |
| AciI | CCGC | 9 cut(s) | 216, 765, 1068, 1367, 1760, 1856, 2250, 2654, 2853 |
| AclWI | GGATC | 2 cut(s) | 824, 2801 |
| AcoI | YGGCCR | 1 cut(s) | 217 |
| AcuI | CTGAAG | 4 cut(s) | 745, 1974, 2148, 2565 |
| AflII | CTTAAG | 1 cut(s) | 1534 |
| AflIII | ACRYGT | 3 cut(s) | 2733, 2788, 2995 |
| AhlI | ACTAGT | 3 cut(s) | 1399, 2242, 2840 |
| AjiI | CACGTC | 1 cut(s) | 2461 |
| AjnI | CCWGG | 1 cut(s) | 167 |
| AleI | CACNNNNGTG | 1 cut(s) | 1428 |
| Alw21I | GWGCWC | 2 cut(s) | 1953, 2434 |
| Alw26I | GTCTC | 1 cut(s) | 2233 |
| AlwI | GGATC | 2 cut(s) | 824, 2801 |
| Ama87I | CYCGRG | 2 cut(s) | 395, 1034 |
| AoxI | GGCC | 5 cut(s) | 75, 217, 634, 1917, 2720 |
| ApeKI | GCWGC | 5 cut(s) | 379, 711, 2377, 2380, 2835 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1291, 1323 |
| AseI | ATTAAT | 1 cut(s) | 1877 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 586, 758, 1332, 2282 |
| Asp718I | GGTACC | 1 cut(s) | 2612 |
| AspA2I | CCTAGG | 1 cut(s) | 1847 |
| AspLEI | GCGC | 2 cut(s) | 543, 2962 |
| AspS9I | GGNCC | 5 cut(s) | 114, 247, 767, 1358, 1917 |
| AsuC2I | CCSGG | 2 cut(s) | 376, 3025 |
| AsuHPI | GGTGA | 3 cut(s) | 1733, 1825, 2248 |
| AvaI | CYCGRG | 2 cut(s) | 395, 1034 |
| AvaII | GGWCC | 4 cut(s) | 114, 247, 767, 1358 |
| AvrII | CCTAGG | 1 cut(s) | 1847 |
| BanI | GGYRCC | 3 cut(s) | 344, 2223, 2612 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1710, 1742, 2145, 2177 |
| BauI | CACGAG | 1 cut(s) | 229 |
| BbsI | GAAGAC | 2 cut(s) | 229, 1369 |
| Bbv12I | GWGCWC | 2 cut(s) | 1953, 2434 |
| BbvI | GCAGC | 5 cut(s) | 366, 698, 2367, 2389, 2847 |
| BccI | CCATC | 9 cut(s) | 356, 434, 784, 1231, 2005, 2048, 2309, 2767, 2876 |
| BceAI | ACGGC | 2 cut(s) | 358, 1904 |
| BciT130I | CCWGG | 1 cut(s) | 169 |
| BclI | TGATCA | 2 cut(s) | 63, 3045 |
| BcnI | CCSGG | 2 cut(s) | 376, 3025 |
| BcoDI | GTCTC | 1 cut(s) | 2233 |
| BcuI | ACTAGT | 3 cut(s) | 1399, 2242, 2840 |
| BfmI | CTRYAG | 3 cut(s) | 135, 380, 3033 |
| BfrI | CTTAAG | 1 cut(s) | 1534 |
| BglII | AGATCT | 3 cut(s) | 6, 1618, 2035 |
| BisI | GCNGC | 7 cut(s) | 217, 380, 712, 1856, 2378, 2381, 2836 |
| BlnI | CCTAGG | 1 cut(s) | 1847 |
| BlpI | GCTNAGC | 1 cut(s) | 1064 |
| BlsI | GCNGC | 7 cut(s) | 218, 381, 713, 1857, 2379, 2382, 2837 |
| BmcAI | AGTACT | 2 cut(s) | 1113, 2154 |
| Bme1390I | CCNGG | 3 cut(s) | 169, 376, 3025 |
| Bme18I | GGWCC | 4 cut(s) | 114, 247, 767, 1358 |
| BmeT110I | CYCGRG | 2 cut(s) | 395, 1034 |
| BmgBI | CACGTC | 1 cut(s) | 2461 |
| BmgT120I | GGNCC | 5 cut(s) | 114, 247, 767, 1358, 1917 |
| BmiI | GGNNCC | 7 cut(s) | 346, 1474, 1676, 1918, 2225, 2614, 3022 |
| BmrFI | CCNGG | 3 cut(s) | 169, 376, 3025 |
| BmrI | ACTGGG | 1 cut(s) | 2116 |
| BmsI | GCATC | 5 cut(s) | 165, 803, 2694, 2998, 3018 |
| BmuI | ACTGGG | 1 cut(s) | 2116 |
| BpiI | GAAGAC | 2 cut(s) | 229, 1369 |
| BpmI | CTGGAG | 4 cut(s) | 190, 287, 1250, 2720 |
| Bpu10I | CCTNAGC | 2 cut(s) | 161, 1860 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1064 |
| BpuEI | CTTGAG | 6 cut(s) | 319, 339, 617, 1009, 1085, 2242 |
| BpuMI | CCSGG | 2 cut(s) | 376, 3025 |
| BsaAI | YACGTR | 1 cut(s) | 2996 |
| BsaBI | GATNNNNATC | 3 cut(s) | 65, 897, 2319 |
| BsaJI | CCNNGG | 6 cut(s) | 15, 340, 394, 577, 649, 1847 |
| BsaWI | WCCGGW | 3 cut(s) | 836, 2226, 2809 |
| Bse3DI | GCAATG | 2 cut(s) | 2625, 2916 |
| Bse8I | GATNNNNATC | 3 cut(s) | 65, 897, 2319 |
| BseBI | CCWGG | 1 cut(s) | 169 |
| BseDI | CCNNGG | 6 cut(s) | 15, 340, 394, 577, 649, 1847 |
| BseJI | GATNNNNATC | 3 cut(s) | 65, 897, 2319 |
| BseMI | GCAATG | 2 cut(s) | 2625, 2916 |
| BseMII | CTCAG | 3 cut(s) | 80, 322, 1817 |
| BseRI | GAGGAG | 1 cut(s) | 1088 |
| BseX3I | CGGCCG | 1 cut(s) | 217 |
| BseXI | GCAGC | 5 cut(s) | 366, 698, 2367, 2389, 2847 |
| BsgI | GTGCAG | 3 cut(s) | 697, 1333, 2396 |
| Bsh1236I | CGCG | 1 cut(s) | 2962 |
| Bsh1285I | CGRYCG | 1 cut(s) | 220 |
| BshFI | GGCC | 5 cut(s) | 77, 219, 636, 1919, 2722 |
| BshNI | GGYRCC | 3 cut(s) | 344, 2223, 2612 |
| BsiEI | CGRYCG | 1 cut(s) | 220 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1953, 2434 |
| BsiHKCI | CYCGRG | 2 cut(s) | 395, 1034 |
| BsiSI | CCGG | 5 cut(s) | 376, 837, 2227, 2810, 3024 |
| BslFI | GGGAC | 5 cut(s) | 358, 399, 830, 2447, 2684 |
| BsmAI | GTCTC | 1 cut(s) | 2233 |
| BsmFI | GGGAC | 5 cut(s) | 358, 399, 830, 2447, 2684 |
| BsmI | GAATGC | 1 cut(s) | 1074 |
| BsnI | GGCC | 5 cut(s) | 77, 219, 636, 1919, 2722 |
| BsoBI | CYCGRG | 2 cut(s) | 395, 1034 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1953, 2434 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1064 |
| Bsp19I | CCATGG | 1 cut(s) | 15 |
| BspACI | CCGC | 9 cut(s) | 216, 765, 1068, 1367, 1760, 1856, 2250, 2654, 2853 |
| BspANI | GGCC | 5 cut(s) | 77, 219, 636, 1919, 2722 |
| BspCNI | CTCAG | 3 cut(s) | 81, 321, 1816 |
| BspFNI | CGCG | 1 cut(s) | 2962 |
| BspHI | TCATGA | 1 cut(s) | 639 |
| BspLI | GGNNCC | 7 cut(s) | 346, 1474, 1676, 1918, 2225, 2614, 3022 |
| BspMAI | CTGCAG | 1 cut(s) | 384 |
| BspPI | GGATC | 2 cut(s) | 824, 2801 |
| BspT107I | GGYRCC | 3 cut(s) | 344, 2223, 2612 |
| BspTI | CTTAAG | 1 cut(s) | 1534 |
| BsrDI | GCAATG | 2 cut(s) | 2625, 2916 |
| BssECI | CCNNGG | 6 cut(s) | 15, 340, 394, 577, 649, 1847 |
| BssNAI | GTATAC | 1 cut(s) | 1799 |
| BssSI | CACGAG | 1 cut(s) | 229 |
| BssT1I | CCWWGG | 4 cut(s) | 15, 577, 649, 1847 |
| Bst1107I | GTATAC | 1 cut(s) | 1799 |
| Bst2BI | CACGAG | 1 cut(s) | 229 |
| Bst2UI | CCWGG | 1 cut(s) | 169 |
| Bst4CI | ACNGT | 6 cut(s) | 51, 114, 241, 864, 2477, 2896 |
| Bst6I | CTCTTC | 3 cut(s) | 85, 940, 2895 |
| BstAFI | CTTAAG | 1 cut(s) | 1534 |
| BstBAI | YACGTR | 1 cut(s) | 2996 |
| BstC8I | GCNNGC | 8 cut(s) | 123, 263, 1531, 1866, 1893, 2254, 2524, 2857 |
| BstDEI | CTNAG | 9 cut(s) | 89, 161, 308, 1064, 1258, 1427, 1540, 1803, 1860 |
| BstDSI | CCRYGG | 2 cut(s) | 15, 340 |
| BstFNI | CGCG | 1 cut(s) | 2962 |
| BstHHI | GCGC | 2 cut(s) | 543, 2962 |
| BstMAI | GTCTC | 1 cut(s) | 2233 |
| BstMCI | CGRYCG | 1 cut(s) | 220 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 162, 342, 1861, 3037 |
| BstNI | CCWGG | 1 cut(s) | 169 |
| BstNSI | RCATGY | 2 cut(s) | 1533, 2737 |
| BstSCI | CCNGG | 3 cut(s) | 167, 374, 3023 |
| BstSFI | CTRYAG | 3 cut(s) | 135, 380, 3033 |
| BstUI | CGCG | 1 cut(s) | 2962 |
| BstV1I | GCAGC | 5 cut(s) | 366, 698, 2367, 2389, 2847 |
| BstV2I | GAAGAC | 2 cut(s) | 229, 1369 |
| BstX2I | RGATCY | 4 cut(s) | 6, 816, 1618, 2035 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 265, 1430, 2882 |
| BstYI | RGATCY | 4 cut(s) | 6, 816, 1618, 2035 |
| BstZ17I | GTATAC | 1 cut(s) | 1799 |
| BstZI | CGGCCG | 1 cut(s) | 217 |
| BsuRI | GGCC | 5 cut(s) | 77, 219, 636, 1919, 2722 |
| BtgI | CCRYGG | 2 cut(s) | 15, 340 |
| BtrI | CACGTC | 1 cut(s) | 2461 |
| BtsI | GCAGTG | 1 cut(s) | 3048 |
| BtsIMutI | CAGTG | 3 cut(s) | 2473, 3011, 3048 |
| Cac8I | GCNNGC | 8 cut(s) | 123, 263, 1531, 1866, 1893, 2254, 2524, 2857 |
| CciI | TCATGA | 1 cut(s) | 639 |
| CfoI | GCGC | 2 cut(s) | 543, 2962 |
| Cfr13I | GGNCC | 5 cut(s) | 114, 247, 767, 1358, 1917 |
| CviAII | CATG | 9 cut(s) | 16, 43, 640, 1530, 1771, 2510, 2515, 2644, 2734 |
| DdeI | CTNAG | 9 cut(s) | 89, 161, 308, 1064, 1258, 1427, 1540, 1803, 1860 |
| DraI | TTTAAA | 1 cut(s) | 130 |
| EaeI | YGGCCR | 1 cut(s) | 217 |
| EagI | CGGCCG | 1 cut(s) | 217 |
| Eam1104I | CTCTTC | 3 cut(s) | 85, 940, 2895 |
| EarI | CTCTTC | 3 cut(s) | 85, 940, 2895 |
| EclXI | CGGCCG | 1 cut(s) | 217 |
| Eco130I | CCWWGG | 4 cut(s) | 15, 577, 649, 1847 |
| Eco47I | GGWCC | 4 cut(s) | 114, 247, 767, 1358 |
| Eco52I | CGGCCG | 1 cut(s) | 217 |
| Eco57I | CTGAAG | 4 cut(s) | 745, 1974, 2148, 2565 |
| Eco88I | CYCGRG | 2 cut(s) | 395, 1034 |
| EcoRI | GAATTC | 2 cut(s) | 1581, 2282 |
| EcoRII | CCWGG | 1 cut(s) | 167 |
| EcoT14I | CCWWGG | 4 cut(s) | 15, 577, 649, 1847 |
| EcoT22I | ATGCAT | 1 cut(s) | 2949 |
| ErhI | CCWWGG | 4 cut(s) | 15, 577, 649, 1847 |
| FaeI | CATG | 9 cut(s) | 19, 46, 643, 1533, 1774, 2513, 2518, 2647, 2737 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2892, 2924 |
| FaqI | GGGAC | 5 cut(s) | 358, 399, 830, 2447, 2684 |
| FatI | CATG | 9 cut(s) | 15, 42, 639, 1529, 1770, 2509, 2514, 2643, 2733 |
| FauI | CCCGC | 1 cut(s) | 2860 |
| FauNDI | CATATG | 2 cut(s) | 2665, 3042 |
| FbaI | TGATCA | 2 cut(s) | 63, 3045 |
| FblI | GTMKAC | 1 cut(s) | 1798 |
| Fnu4HI | GCNGC | 7 cut(s) | 217, 380, 712, 1856, 2378, 2381, 2836 |
| Fsp4HI | GCNGC | 7 cut(s) | 217, 380, 712, 1856, 2378, 2381, 2836 |
| FspI | TGCGCA | 1 cut(s) | 542 |
| GlaI | GCGC | 2 cut(s) | 542, 2961 |
| GluI | GCNGC | 7 cut(s) | 217, 380, 712, 1856, 2378, 2381, 2836 |
| GsuI | CTGGAG | 4 cut(s) | 190, 287, 1250, 2720 |
| HaeIII | GGCC | 5 cut(s) | 77, 219, 636, 1919, 2722 |
| HapII | CCGG | 5 cut(s) | 376, 837, 2227, 2810, 3024 |
| HhaI | GCGC | 2 cut(s) | 543, 2962 |
| Hin1II | CATG | 9 cut(s) | 19, 46, 643, 1533, 1774, 2513, 2518, 2647, 2737 |
| Hin6I | GCGC | 2 cut(s) | 541, 2960 |
| HinP1I | GCGC | 2 cut(s) | 541, 2960 |
| HincII | GTYRAC | 1 cut(s) | 2661 |
| HindII | GTYRAC | 1 cut(s) | 2661 |
| HindIII | AAGCTT | 3 cut(s) | 521, 1537, 2289 |
| HpaII | CCGG | 5 cut(s) | 376, 837, 2227, 2810, 3024 |
| HphI | GGTGA | 3 cut(s) | 1733, 1825, 2248 |
| Hpy166II | GTNNAC | 4 cut(s) | 1799, 2104, 2473, 2661 |
| Hpy8I | GTNNAC | 4 cut(s) | 1799, 2104, 2473, 2661 |
| HpyAV | CCTTC | 9 cut(s) | 582, 608, 740, 1047, 1690, 1712, 1730, 2589, 2604 |
| HpyCH4III | ACNGT | 6 cut(s) | 51, 114, 241, 864, 2477, 2896 |
| HpyCH4IV | ACGT | 4 cut(s) | 2460, 2673, 2788, 2995 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 162, 342, 1861, 3037 |
| HpyF3I | CTNAG | 9 cut(s) | 89, 161, 308, 1064, 1258, 1427, 1540, 1803, 1860 |
| HpySE526I | ACGT | 4 cut(s) | 2460, 2673, 2788, 2995 |
| Hsp92II | CATG | 9 cut(s) | 19, 46, 643, 1533, 1774, 2513, 2518, 2647, 2737 |
| HspAI | GCGC | 2 cut(s) | 541, 2960 |
| KpnI | GGTACC | 1 cut(s) | 2616 |
| Ksp22I | TGATCA | 2 cut(s) | 63, 3045 |
| LmnI | GCTCC | 2 cut(s) | 170, 1956 |
| Lsp1109I | GCAGC | 5 cut(s) | 366, 698, 2367, 2389, 2847 |
| LweI | GCATC | 5 cut(s) | 165, 803, 2694, 2998, 3018 |
| MaeII | ACGT | 4 cut(s) | 2460, 2673, 2788, 2995 |
| MaeIII | GTNAC | 7 cut(s) | 235, 1395, 1418, 1634, 2245, 2334, 2694 |
| MflI | RGATCY | 4 cut(s) | 6, 816, 1618, 2035 |
| MhlI | GDGCHC | 2 cut(s) | 1953, 2434 |
| MlyI | GAGTC | 2 cut(s) | 243, 1991 |
| MmeI | TCCRAC | 4 cut(s) | 207, 822, 861, 2292 |
| Mph1103I | ATGCAT | 1 cut(s) | 2949 |
| MroXI | GAANNNNTTC | 4 cut(s) | 586, 758, 1332, 2282 |
| MslI | CAYNNNNRTG | 2 cut(s) | 20, 1428 |
| MspA1I | CMGCKG | 3 cut(s) | 265, 765, 2380 |
| MspCI | CTTAAG | 1 cut(s) | 1534 |
| MspI | CCGG | 5 cut(s) | 376, 837, 2227, 2810, 3024 |
| MspR9I | CCNGG | 3 cut(s) | 169, 376, 3025 |
| Mva1269I | GAATGC | 1 cut(s) | 1074 |
| MvaI | CCWGG | 1 cut(s) | 169 |
| MvnI | CGCG | 1 cut(s) | 2962 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 162, 342, 1861, 3037 |
| NciI | CCSGG | 2 cut(s) | 376, 3025 |
| NcoI | CCATGG | 1 cut(s) | 15 |
| NdeI | CATATG | 2 cut(s) | 2665, 3042 |
| NlaIII | CATG | 9 cut(s) | 19, 46, 643, 1533, 1774, 2513, 2518, 2647, 2737 |
| NlaIV | GGNNCC | 7 cut(s) | 346, 1474, 1676, 1918, 2225, 2614, 3022 |
| NmeAIII | GCCGAG | 1 cut(s) | 2514 |
| NmuCI | GTSAC | 3 cut(s) | 235, 1395, 2245 |
| NsbI | TGCGCA | 1 cut(s) | 542 |
| NsiI | ATGCAT | 1 cut(s) | 2949 |
| NspI | RCATGY | 2 cut(s) | 1533, 2737 |
| OliI | CACNNNNGTG | 1 cut(s) | 1428 |
| PaeI | GCATGC | 1 cut(s) | 1533 |
| PaeR7I | CTCGAG | 1 cut(s) | 1034 |
| PagI | TCATGA | 1 cut(s) | 639 |
| PciI | ACATGT | 1 cut(s) | 2733 |
| PctI | GAATGC | 1 cut(s) | 1074 |
| PdmI | GAANNNNTTC | 4 cut(s) | 586, 758, 1332, 2282 |
| PfeI | GAWTC | 9 cut(s) | 176, 601, 1007, 1057, 1480, 1970, 2230, 2389, 2688 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2356, 2639 |
| PfoI | TCCNGGA | 1 cut(s) | 167 |
| PkrI | GCNGC | 7 cut(s) | 218, 381, 713, 1857, 2379, 2382, 2837 |
| PleI | GAGTC | 2 cut(s) | 242, 1990 |
| PpsI | GAGTC | 2 cut(s) | 242, 1990 |
| Ppu21I | YACGTR | 1 cut(s) | 2996 |
| PscI | ACATGT | 1 cut(s) | 2733 |
| PshBI | ATTAAT | 1 cut(s) | 1877 |
| PsiI | TTATAA | 2 cut(s) | 1200, 1887 |
| Psp6I | CCWGG | 1 cut(s) | 167 |
| PspGI | CCWGG | 1 cut(s) | 167 |
| PspN4I | GGNNCC | 7 cut(s) | 346, 1474, 1676, 1918, 2225, 2614, 3022 |
| PspPI | GGNCC | 5 cut(s) | 114, 247, 767, 1358, 1917 |
| PspXI | VCTCGAGB | 1 cut(s) | 1034 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 392, 424, 2080, 2112 |
| PstI | CTGCAG | 1 cut(s) | 384 |
| PsuI | RGATCY | 4 cut(s) | 6, 816, 1618, 2035 |
| PvuII | CAGCTG | 2 cut(s) | 265, 2380 |
| RseI | CAYNNNNRTG | 2 cut(s) | 20, 1428 |
| SatI | GCNGC | 7 cut(s) | 217, 380, 712, 1856, 2378, 2381, 2836 |
| Sau96I | GGNCC | 5 cut(s) | 114, 247, 767, 1358, 1917 |
| ScaI | AGTACT | 2 cut(s) | 1113, 2154 |
| SchI | GAGTC | 2 cut(s) | 243, 1991 |
| ScrFI | CCNGG | 3 cut(s) | 169, 376, 3025 |
| SduI | GDGCHC | 2 cut(s) | 1953, 2434 |
| SfaNI | GCATC | 5 cut(s) | 165, 803, 2694, 2998, 3018 |
| SfcI | CTRYAG | 3 cut(s) | 135, 380, 3033 |
| Sfr274I | CTCGAG | 1 cut(s) | 1034 |
| SinI | GGWCC | 4 cut(s) | 114, 247, 767, 1358 |
| SlaI | CTCGAG | 1 cut(s) | 1034 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 20, 1428 |
| SmlI | CTYRAG | 8 cut(s) | 298, 354, 596, 1024, 1034, 1100, 1534, 2257 |
| SmoI | CTYRAG | 8 cut(s) | 298, 354, 596, 1024, 1034, 1100, 1534, 2257 |
| SpeI | ACTAGT | 3 cut(s) | 1399, 2242, 2840 |
| SphI | GCATGC | 1 cut(s) | 1533 |
| SsiI | CCGC | 9 cut(s) | 216, 765, 1068, 1367, 1760, 1856, 2250, 2654, 2853 |
| SspI | AATATT | 1 cut(s) | 720 |
| StyD4I | CCNGG | 3 cut(s) | 167, 374, 3023 |
| StyI | CCWWGG | 4 cut(s) | 15, 577, 649, 1847 |
| TaaI | ACNGT | 6 cut(s) | 51, 114, 241, 864, 2477, 2896 |
| TaiI | ACGT | 4 cut(s) | 2463, 2676, 2791, 2998 |
| TaqI | TCGA | 5 cut(s) | 367, 1035, 1122, 2118, 2603 |
| TatI | WGTACW | 6 cut(s) | 1111, 1941, 2103, 2152, 2584, 2843 |
| TauI | GCSGC | 2 cut(s) | 219, 1858 |
| TfiI | GAWTC | 9 cut(s) | 176, 601, 1007, 1057, 1480, 1970, 2230, 2389, 2688 |
| TscAI | CASTG | 3 cut(s) | 2480, 3018, 3055 |
| TseFI | GTSAC | 3 cut(s) | 235, 1395, 2245 |
| TseI | GCWGC | 5 cut(s) | 379, 711, 2377, 2380, 2835 |
| Tsp45I | GTSAC | 3 cut(s) | 235, 1395, 2245 |
| TspDTI | ATGAA | 8 cut(s) | 31, 656, 767, 1461, 2001, 2179, 2334, 2343 |
| TspGWI | ACGGA | 1 cut(s) | 1370 |
| TspRI | CASTG | 3 cut(s) | 2480, 3018, 3055 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2356, 2639 |
| Vha464I | CTTAAG | 1 cut(s) | 1534 |
| VpaK11BI | GGWCC | 4 cut(s) | 114, 247, 767, 1358 |
| VspI | ATTAAT | 1 cut(s) | 1877 |
| XbaI | TCTAGA | 2 cut(s) | 2180, 2323 |
| XceI | RCATGY | 2 cut(s) | 1533, 2737 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2357, 2962 |
| XhoI | CTCGAG | 1 cut(s) | 1034 |
| XmaJI | CCTAGG | 1 cut(s) | 1847 |
| XmiI | GTMKAC | 1 cut(s) | 1798 |
| XmnI | GAANNNNTTC | 4 cut(s) | 586, 758, 1332, 2282 |
| ZrmI | AGTACT | 2 cut(s) | 1113, 2154 |
| Zsp2I | ATGCAT | 1 cut(s) | 2949 |