Rw3G010360
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Forward (+)
9924378 .. 9927692
3315 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G010360.1

Sequence Viewer

Length: 3135 bp
ATGGCCTTTTTTCTTCCATATAGGACTTCCACACCACATTTCTCAATTTTAATTAATCTGCTCATCCCATCTTTGTTCATCATCACCTTGTTGCCTTCACCATATTCTACTTCTGCAGCCACCATCATTTCCAAATCCAATCAGACCGATAGGCTAGCCTTACTTGCCATTAAAGCTCAGATCATCAAAGACCCAAATAGCATTTTGAGCTCATGGAATGACTCTCTCCATTTCTGCAACTGGAAAGGTGTGACTTGCGGTCTTCGTCACCAAAGAGTCATGACCTTGAACTTGAGCTCATATCAGTTAACCGGCTCACTCTCTCCTCATATAGGAAACCTCACTTTCCTTTCTGGCCTCAACCTTGAACTCAACAATTTCCACAGTAGTCTCCCACAAGAAATTGGCCATTTATTCAGGCTCAAATACCTTAACCTCTCCAACAATTCATTTTCTGGGGAAATCCCACCAAATCTCTCAAATTGTTCTAGTCTAATCTGGCTTCGTTTAGGCTTCAACAAGTTAATTGGGAAAATCCCATTTGAATTAGGCTCATTGCAAAAGCTAGAGAGAGTTCAACTTCACTACAACAGCCTAAGTGGACCGCTTCCAAGTTCTGTAGGCAACCTTTCCTCTGTTAGATCTCTGTCTCTGGCAGTTAACAACTTGGAGGGAAAGATACCGGAGTCACTGGGCCGCTTGAAGAATTTGGAATTCCTTGGATTTGGGGTTAATCAATTTTCTGGTATGGTCCCATCCTCAATTTACAACCTTTCTTCTCTTACAAGGCTTAGTTTGCCATACAATCAACTGCAGGGGAACTTGCCTTCAGACTTGGGTTTCACTCTTCCTAACTTGCTAGTCTTAAATTTGGGTCACAATCTCTTCACTGGAACCTTACCAGCATCACTCTCCAATGCGACAAATCTTCTTGAATTAGATGTCAATGGGAGTAATTTCACTGGAGAAGTTGCAATTGATTTTGGAGGCCTAACTAGTTTATGGTGGCTGATTCTTGCTTCGAATTCCTTGGGCACAGTACAAGCAAATGATTTGAGTTTCTTTAACTCTTTGAGCAAATGCAGGAACTTACAAATTCTTGATTTAAGCGACAACCAATTTGGAGGGGTGTTGCCAGATTCCATGTCCAACTTCTCAAACCAACTTGTGTCACTGAGACTGGGAAGAAACCAATTATCTGGAAGCTTCCCTACGGGAATATTTGAGAACCTTGTTAATCTGACAGAACTGATGATGGAGAAGAACAATTTCAGTGGTGGAATTCCTGCAATTATTGGTAACCTCTGGATGCTGCGGCGATTAGATTTATCTGCAAATAAGTTTTCTGGCCAAATTCCATCATCCATAGCCAATATGAGTCAATTGTATGCTCTCTATCTTCAAAACAATCATTTCACAGGTTCTATTCCTTCAAGTTTTGGGAAACTTTCAAACTTGCAAGAGCTAGACCTTTCTCAGAATTATCTCAATGGAATCATACCAGAAAAAGTTATGAGCCTTTCTTCTCTGACCATTTCCCTAAACCTTTCTCAAAACCGATTGACTGGTTCCTTGCCCTCAAAAGTTGGAGACTTGAAAAATCTAGGGAACTTGGATCTTTCTGAGAATATATTGTCAGGAGAAATTCCCAGTAGCCTTGCTAGTTGTGTATCCTTAGAACACCTTCACTTGGAAGGTAACTTTTTTGAAGGAACCATTCCTTCATCTTTTAGATCCTTGAGAGGTCTTCAAGACTTGGATCTTTCGCATAACAACTTATCTGGCCAAATTCCTGAATTTTTTCAACTTATTTCCCTTGTGAACTTAAATCTTTCCTTCAACAATTTTGAGGGTCAAGTGCCAACAGGAGGAGTTTTCAAAAATGCAACTGGCACTTCAATAGCAGGAAATGGAAAGCTTTGTGGAGGCATACCTGAATTTCAATTGCCGGTTTGCACTGCTACTAAGCCAAAGAAAAGAAAGATGTCTCAAGGACTGAAATTCATGATCTTATTGCTTTCTGGACTTTTGGGGTTAGTTTTGATCATGTCTCTTCTAGTTATTTATTGGTTAAGGAAGGCCAAAACACCACCCTCTACAGAAGCTTCACCAACTAAGGAATTGCATTTGAAGATATCCTATGAAACTCTCCTTCAAGCTACCGGAGGATTTTCTCCTGCCAACCTAATTGGTTCTGGTAGCTTTGGTTCTGTCTACAAAGGGATTCTTGATGAAGTAGTTGTGGCAGTAAAGGTACTCTACTTATATCAACCAGGTGCTCTAAAAAGCTTCTCAGCTGAATGTGAAGCCTTGAGAAGTATTCGGCACCGGAATCTTGTGAAAGTCTTAACTGCCTGCTCAAGCGTTGATTTTCAAGGTAATGAGTTTAAAGCTCTTGTCTATGAGTATATGCCAAATGGGAGTCTGGAGAGTTGGCTACATCCACTTTCAGAAGCTGATGACTTAAATGGTGACTTGAGGATGCTTAGTCTTCTACAAAGATTGAACATTGCCATTGATGTGGCATCAGCTCTGGATTATCTTCATCACCATTGCGAAGAACAGATCGTTCACTGTGATCTGAAGCCAAGCAATATCCTACTTGACAATAATATGACTGCACATGTGGGTGATTTTGGGTTGGCCAGGTTCATTCCAGAAGCTTCAAGTAGATCTCCTATCAATCAAACCAGCTCAGTAGGACTGAAGGGAACTGTTGGCTATGCTGCACCAGAGTATGGCATGGGAAGCAAGGTCACAACTTACGGCGATGTGTACAGCTTTGGTATACTCTTATTAGAAATGTTCACAGGGAAGAAGCCCACTGATGACATGTTTAAAGAAGGACTGCAGCTCCATAATTTTGTTAAGAATGCATTGCCTGAACACATATCAGAAGTTTTAGAACCATTGTTTGTAGAAGGAAGGGAAGGAGAAGACGATCACTGGACTAGTGAAGAGAAATGCATTGTGGGGCAGAGAAAAAATGACCTAAATCAAGAGTGCCTAATTGCAATACTCAGAATTGGAGTTGCTTGTTCAGTGGAATCACCTAGAGGGAGAATGGATATCAGTCATGTTGTTAAGGAGTTACAGTTAGTCAGAGACACTCTTATTGGATCTGGAGTGGACTAG

Protein Analysis

1044

Amino Acids

114.17

Weight (kDa)

6.26

Isoelectric Point (pI)

38.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 48 - 86 2.2e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 92 - 241 1.1e-11 Leucine-rich repeat region
LRR_14 PF23598 230 - 420 6.8e-09 Leucine-rich repeat region
LRR_14 PF23598 392 - 494 9.4e-09 Leucine-rich repeat region
LRR_8 PF13855 461 - 521 3.3e-10 Leucine rich repeat
LRR_14 PF23598 514 - 615 3.2e-06 Leucine-rich repeat region
LRR_8 PF13855 558 - 616 4.9e-07 Leucine rich repeat
Pkinase PF00069 728 - 946 4.8e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 729 - 948 1.1e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2325
AccB7I CCANNNNNTGG 1 cut(s) 2738
AccI GTMKAC 2 cut(s) 2214, 2788
AciI CCGC 4 cut(s) 258, 605, 697, 1315
AclWI GGATC 4 cut(s) 1623, 1728, 1767, 3127
AcoI YGGCCR 4 cut(s) 406, 1348, 1783, 2643
AcuI CTGAAG 3 cut(s) 813, 2603, 2726
AfaI GTAC 3 cut(s) 1041, 2256, 2777
AfiI CCNNNNNNNGG 4 cut(s) 332, 1690, 1868, 2738
AflIII ACRYGT 2 cut(s) 2623, 2832
AhdI GACNNNNNGTC 1 cut(s) 258
AhlI ACTAGT 2 cut(s) 995, 2951
AjnI CCWGG 2 cut(s) 2272, 2645
Alw21I GWGCWC 3 cut(s) 212, 299, 2281
Alw26I GTCTC 7 cut(s) 395, 654, 1171, 1584, 1992, 2055, 3099
AlwI GGATC 4 cut(s) 1623, 1728, 1767, 3127
AlwNI CAGNNNCTG 1 cut(s) 2456
AoxI GGCC 9 cut(s) 3, 355, 406, 694, 988, 1348, 1783, 2079, 2643
ApeKI GCWGC 4 cut(s) 116, 1312, 2726, 2851
ArsI GACNNNNNNTTYG 2 cut(s) 1103, 1135
AseI ATTAAT 1 cut(s) 54
Asp700I GAANNNNTTC 3 cut(s) 1268, 1683, 1800
AspS9I GGNCC 3 cut(s) 602, 694, 751
AsuHPI GGTGA 8 cut(s) 76, 90, 260, 2100, 2483, 2540, 2642, 3042
AsuII TTCGAA 1 cut(s) 1022
AsuNHI GCTAGC 1 cut(s) 154
AvaII GGWCC 2 cut(s) 602, 751
BaeGI GKGCMC 1 cut(s) 1037
BaeI ACNNNNGTAYC 2 cut(s) 671, 704
BalI TGGCCA 4 cut(s) 408, 1350, 1785, 2645
BanI GGYRCC 1 cut(s) 2325
BanII GRGCYC 2 cut(s) 212, 299
BarI GAAGNNNNNNTAC 2 cut(s) 1195, 1227
BbsI GAAGAC 4 cut(s) 254, 1739, 2483, 2943
Bbv12I GWGCWC 3 cut(s) 212, 299, 2281
BbvI GCAGC 4 cut(s) 128, 1299, 2713, 2863
BccI CCATC 5 cut(s) 76, 131, 763, 1249, 1366
BceAI ACGGC 1 cut(s) 2782
BciT130I CCWGG 2 cut(s) 2274, 2647
BciVI GTATCC 1 cut(s) 1681
BclI TGATCA 1 cut(s) 2043
BcoDI GTCTC 7 cut(s) 395, 654, 1171, 1584, 1992, 2055, 3099
BcuI ACTAGT 2 cut(s) 995, 2951
BfmI CTRYAG 5 cut(s) 114, 618, 812, 2097, 2849
BfuI GTATCC 1 cut(s) 1681
BglII AGATCT 2 cut(s) 641, 2672
BisI GCNGC 6 cut(s) 117, 697, 1313, 1316, 2727, 2852
BlsI GCNGC 6 cut(s) 118, 698, 1314, 1317, 2728, 2853
Bme1390I CCNGG 2 cut(s) 2274, 2647
Bme18I GGWCC 2 cut(s) 602, 751
BmeRI GACNNNNNGTC 1 cut(s) 258
BmgT120I GGNCC 3 cut(s) 602, 694, 751
BmiI GGNNCC 5 cut(s) 753, 895, 1570, 1714, 2327
BmrFI CCNGG 2 cut(s) 2274, 2647
BmrI ACTGGG 3 cut(s) 701, 1190, 1644
BmsI GCATC 4 cut(s) 914, 1299, 2472, 2534
BmtI GCTAGC 1 cut(s) 158
BmuI ACTGGG 3 cut(s) 701, 1190, 1644
BpiI GAAGAC 4 cut(s) 254, 1739, 2483, 2943
BpmI CTGGAG 2 cut(s) 984, 2447
Bpu14I TTCGAA 1 cut(s) 1022
BpuEI CTTGAG 6 cut(s) 313, 1759, 1974, 2332, 2344, 2497
BsaJI CCNNGG 2 cut(s) 718, 1029
BsaWI WCCGGW 3 cut(s) 682, 2162, 2328
BsaXI ACNNNNNCTCC 4 cut(s) 2838, 2868, 3080, 3110
Bsc4I CCNNNNNNNGG 4 cut(s) 332, 1690, 1868, 2738
Bse118I RCCGGY 2 cut(s) 311, 1948
Bse1I ACTGG 9 cut(s) 245, 696, 895, 967, 1185, 1570, 1650, 1894, 2951
Bse3DI GCAATG 4 cut(s) 554, 2508, 2551, 2876
BseBI CCWGG 2 cut(s) 2274, 2647
BseDI CCNNGG 2 cut(s) 718, 1029
BseGI GGATG 6 cut(s) 63, 755, 1314, 1361, 2440, 2487
BseLI CCNNNNNNNGG 4 cut(s) 332, 1690, 1868, 2738
BseMI GCAATG 4 cut(s) 554, 2508, 2551, 2876
BseMII CTCAG 7 cut(s) 191, 1166, 1490, 1614, 2307, 2709, 3034
BseNI ACTGG 9 cut(s) 245, 696, 895, 967, 1185, 1570, 1650, 1894, 2951
BseRI GAGGAG 2 cut(s) 315, 1884
BseSI GKGCMC 1 cut(s) 1037
BseXI GCAGC 4 cut(s) 128, 1299, 2713, 2863
BsgI GTGCAG 2 cut(s) 2604, 2712
BshFI GGCC 9 cut(s) 5, 357, 408, 696, 990, 1350, 1785, 2081, 2645
BshNI GGYRCC 1 cut(s) 2325
BsiHKAI GWGCWC 3 cut(s) 212, 299, 2281
BsiSI CCGG 5 cut(s) 312, 683, 1949, 2163, 2329
BslFI GGGAC 1 cut(s) 737
BslI CCNNNNNNNGG 4 cut(s) 332, 1690, 1868, 2738
BsmAI GTCTC 7 cut(s) 395, 654, 1171, 1584, 1992, 2055, 3099
BsmFI GGGAC 1 cut(s) 737
BsmI GAATGC 1 cut(s) 2878
BsnI GGCC 9 cut(s) 5, 357, 408, 696, 990, 1350, 1785, 2081, 2645
Bsp119I TTCGAA 1 cut(s) 1022
Bsp1286I GDGCHC 4 cut(s) 212, 299, 1037, 2281
Bsp1407I TGTACA 1 cut(s) 2775
BspACI CCGC 4 cut(s) 258, 605, 697, 1315
BspANI GGCC 9 cut(s) 5, 357, 408, 696, 990, 1350, 1785, 2081, 2645
BspCNI CTCAG 7 cut(s) 190, 1167, 1489, 1615, 2306, 2708, 3033
BspHI TCATGA 2 cut(s) 279, 2004
BspLI GGNNCC 5 cut(s) 753, 895, 1570, 1714, 2327
BspMAI CTGCAG 3 cut(s) 118, 816, 2853
BspOI GCTAGC 1 cut(s) 158
BspPI GGATC 4 cut(s) 1623, 1728, 1767, 3127
BspT104I TTCGAA 1 cut(s) 1022
BspT107I GGYRCC 1 cut(s) 2325
BsrDI GCAATG 4 cut(s) 554, 2508, 2551, 2876
BsrFI RCCGGY 2 cut(s) 311, 1948
BsrGI TGTACA 1 cut(s) 2775
BsrI ACTGG 9 cut(s) 245, 696, 895, 967, 1185, 1570, 1650, 1894, 2951
BssAI RCCGGY 2 cut(s) 311, 1948
BssECI CCNNGG 2 cut(s) 718, 1029
BssNAI GTATAC 1 cut(s) 2789
BssT1I CCWWGG 2 cut(s) 718, 1029
Bst1107I GTATAC 1 cut(s) 2789
Bst2UI CCWGG 2 cut(s) 2274, 2647
Bst4CI ACNGT 5 cut(s) 386, 1039, 2576, 2716, 3096
Bst6I CTCTTC 4 cut(s) 852, 890, 2058, 2952
BstAUI TGTACA 1 cut(s) 2775
BstBI TTCGAA 1 cut(s) 1022
BstC8I GCNNGC 2 cut(s) 156, 2356
BstEII GGTNACC 1 cut(s) 1298
BstENI CCTNNNNNAGG 1 cut(s) 330
BstF5I GGATG 6 cut(s) 63, 755, 1314, 1361, 2440, 2487
BstMAI GTCTC 7 cut(s) 395, 654, 1171, 1584, 1992, 2055, 3099
BstMWI GCNNNNNNNGC 5 cut(s) 164, 173, 207, 796, 2748
BstNI CCWGG 2 cut(s) 2274, 2647
BstNSI RCATGY 2 cut(s) 2627, 2836
BstPI GGTNACC 1 cut(s) 1298
BstSCI CCNGG 2 cut(s) 2272, 2645
BstSFI CTRYAG 5 cut(s) 114, 618, 812, 2097, 2849
BstSLI GKGCMC 1 cut(s) 1037
BstV1I GCAGC 4 cut(s) 128, 1299, 2713, 2863
BstV2I GAAGAC 4 cut(s) 254, 1739, 2483, 2943
BstX2I RGATCY 6 cut(s) 641, 1615, 1733, 1759, 2672, 3119
BstXI CCANNNNNNTGG 2 cut(s) 1199, 2521
BstYI RGATCY 6 cut(s) 641, 1615, 1733, 1759, 2672, 3119
BstZ17I GTATAC 1 cut(s) 2789
BsuI GTATCC 1 cut(s) 1681
BsuRI GGCC 9 cut(s) 5, 357, 408, 696, 990, 1350, 1785, 2081, 2645
BtgZI GCGATG 1 cut(s) 2784
BtsCI GGATG 6 cut(s) 63, 755, 1314, 1361, 2440, 2487
BtsI GCAGTG 1 cut(s) 1956
Cac8I GCNNGC 2 cut(s) 156, 2356
CaiI CAGNNNCTG 1 cut(s) 2456
CciI TCATGA 2 cut(s) 279, 2004
Cfr10I RCCGGY 2 cut(s) 311, 1948
Cfr13I GGNCC 3 cut(s) 602, 694, 751
CsiI ACCWGGT 1 cut(s) 2272
Csp6I GTAC 3 cut(s) 1040, 2255, 2776
CspCI CAANNNNNGTGG 2 cut(s) 1255, 1290
CviAII CATG 9 cut(s) 213, 280, 1144, 2005, 2047, 2624, 2743, 2833, 3077
CviQI GTAC 3 cut(s) 1040, 2255, 2776
DraI TTTAAA 2 cut(s) 2389, 2839
DriI GACNNNNNGTC 1 cut(s) 258
EaeI YGGCCR 4 cut(s) 406, 1348, 1783, 2643
Eam1104I CTCTTC 4 cut(s) 852, 890, 2058, 2952
Eam1105I GACNNNNNGTC 1 cut(s) 258
EarI CTCTTC 4 cut(s) 852, 890, 2058, 2952
Ecl136II GAGCTC 2 cut(s) 210, 297
Eco130I CCWWGG 2 cut(s) 718, 1029
Eco147I AGGCCT 1 cut(s) 990
Eco24I GRGCYC 2 cut(s) 212, 299
Eco32I GATATC 2 cut(s) 2136, 3070
Eco47I GGWCC 2 cut(s) 602, 751
Eco53kI GAGCTC 2 cut(s) 210, 297
Eco57I CTGAAG 3 cut(s) 813, 2603, 2726
Eco91I GGTNACC 1 cut(s) 1298
EcoICRI GAGCTC 2 cut(s) 210, 297
EcoNI CCTNNNNNAGG 1 cut(s) 330
EcoO65I GGTNACC 1 cut(s) 1298
EcoRI GAATTC 3 cut(s) 713, 1024, 1281
EcoRII CCWGG 2 cut(s) 2272, 2645
EcoRV GATATC 2 cut(s) 2136, 3070
EcoT14I CCWWGG 2 cut(s) 718, 1029
EcoT22I ATGCAT 2 cut(s) 2878, 2969
EcoT38I GRGCYC 2 cut(s) 212, 299
ErhI CCWWGG 2 cut(s) 718, 1029
FaeI CATG 9 cut(s) 216, 283, 1147, 2008, 2050, 2627, 2746, 2836, 3080
FalI AAGNNNNNCTT 2 cut(s) 2211, 2243
FaqI GGGAC 1 cut(s) 737
FatI CATG 9 cut(s) 212, 279, 1143, 2004, 2046, 2623, 2742, 2832, 3076
FbaI TGATCA 1 cut(s) 2043
FblI GTMKAC 2 cut(s) 2214, 2788
Fnu4HI GCNGC 6 cut(s) 117, 697, 1313, 1316, 2727, 2852
FokI GGATG 6 cut(s) 50, 742, 1321, 1348, 2427, 2494
FriOI GRGCYC 2 cut(s) 212, 299
Fsp4HI GCNGC 6 cut(s) 117, 697, 1313, 1316, 2727, 2852
GluI GCNGC 6 cut(s) 117, 697, 1313, 1316, 2727, 2852
GsuI CTGGAG 2 cut(s) 984, 2447
HaeIII GGCC 9 cut(s) 5, 357, 408, 696, 990, 1350, 1785, 2081, 2645
HapII CCGG 5 cut(s) 312, 683, 1949, 2163, 2329
Hin1II CATG 9 cut(s) 216, 283, 1147, 2008, 2050, 2627, 2746, 2836, 3080
HincII GTYRAC 2 cut(s) 309, 661
HindII GTYRAC 2 cut(s) 309, 661
HindIII AAGCTT 5 cut(s) 1204, 1916, 2103, 2287, 2661
HpaI GTTAAC 2 cut(s) 309, 661
HpaII CCGG 5 cut(s) 312, 683, 1949, 2163, 2329
HphI GGTGA 8 cut(s) 76, 90, 260, 2100, 2483, 2540, 2642, 3042
HpyCH4III ACNGT 5 cut(s) 386, 1039, 2576, 2716, 3096
HpyF10VI GCNNNNNNNGC 5 cut(s) 164, 173, 207, 796, 2748
Hsp92II CATG 9 cut(s) 216, 283, 1147, 2008, 2050, 2627, 2746, 2836, 3080
Ksp22I TGATCA 1 cut(s) 2043
KspAI GTTAAC 2 cut(s) 309, 661
LmnI GCTCC 1 cut(s) 2859
Lsp1109I GCAGC 4 cut(s) 128, 1299, 2713, 2863
LweI GCATC 4 cut(s) 914, 1299, 2472, 2534
MabI ACCWGGT 1 cut(s) 2272
MfeI CAATTG 3 cut(s) 975, 1382, 1943
MflI RGATCY 6 cut(s) 641, 1615, 1733, 1759, 2672, 3119
MhlI GDGCHC 4 cut(s) 212, 299, 1037, 2281
MlsI TGGCCA 4 cut(s) 408, 1350, 1785, 2645
MluNI TGGCCA 4 cut(s) 408, 1350, 1785, 2645
MlyI GAGTC 5 cut(s) 215, 285, 695, 1387, 2431
MmeI TCCRAC 3 cut(s) 465, 1173, 1567
Mox20I TGGCCA 4 cut(s) 408, 1350, 1785, 2645
Mph1103I ATGCAT 2 cut(s) 2878, 2969
MroXI GAANNNNTTC 3 cut(s) 1268, 1683, 1800
MscI TGGCCA 4 cut(s) 408, 1350, 1785, 2645
MslI CAYNNNNRTG 2 cut(s) 2519, 2628
Msp20I TGGCCA 4 cut(s) 408, 1350, 1785, 2645
MspA1I CMGCKG 1 cut(s) 2297
MspI CCGG 5 cut(s) 312, 683, 1949, 2163, 2329
MspR9I CCNGG 2 cut(s) 2274, 2647
MunI CAATTG 3 cut(s) 975, 1382, 1943
Mva1269I GAATGC 1 cut(s) 2878
MvaI CCWGG 2 cut(s) 2274, 2647
MwoI GCNNNNNNNGC 5 cut(s) 164, 173, 207, 796, 2748
NheI GCTAGC 1 cut(s) 154
NlaIII CATG 9 cut(s) 216, 283, 1147, 2008, 2050, 2627, 2746, 2836, 3080
NlaIV GGNNCC 5 cut(s) 753, 895, 1570, 1714, 2327
NmuCI GTSAC 7 cut(s) 250, 266, 687, 875, 1170, 2471, 2755
NsiI ATGCAT 2 cut(s) 2878, 2969
NspI RCATGY 2 cut(s) 2627, 2836
NspV TTCGAA 1 cut(s) 1022
PacI TTAATTAA 1 cut(s) 54
PagI TCATGA 2 cut(s) 279, 2004
PceI AGGCCT 1 cut(s) 990
PciI ACATGT 2 cut(s) 2623, 2832
PctI GAATGC 1 cut(s) 2878
PdmI GAANNNNTTC 3 cut(s) 1268, 1683, 1800
PfeI GAWTC 6 cut(s) 1012, 1139, 1494, 2224, 2332, 3047
PflMI CCANNNNNTGG 1 cut(s) 2738
PkrI GCNGC 6 cut(s) 118, 698, 1314, 1317, 2728, 2853
PleI GAGTC 5 cut(s) 215, 284, 694, 1386, 2430
PpsI GAGTC 5 cut(s) 215, 284, 694, 1386, 2430
PscI ACATGT 2 cut(s) 2623, 2832
PshBI ATTAAT 1 cut(s) 54
Psp124BI GAGCTC 2 cut(s) 212, 299
Psp6I CCWGG 2 cut(s) 2272, 2645
PspEI GGTNACC 1 cut(s) 1298
PspGI CCWGG 2 cut(s) 2272, 2645
PspN4I GGNNCC 5 cut(s) 753, 895, 1570, 1714, 2327
PspPI GGNCC 3 cut(s) 602, 694, 751
PsrI GAACNNNNNNTAC 2 cut(s) 2191, 2223
PstI CTGCAG 3 cut(s) 118, 816, 2853
PstNI CAGNNNCTG 1 cut(s) 2456
PsuI RGATCY 6 cut(s) 641, 1615, 1733, 1759, 2672, 3119
PvuII CAGCTG 1 cut(s) 2297
RsaI GTAC 3 cut(s) 1041, 2256, 2777
RsaNI GTAC 3 cut(s) 1040, 2255, 2776
RseI CAYNNNNRTG 2 cut(s) 2519, 2628
SacI GAGCTC 2 cut(s) 212, 299
SatI GCNGC 6 cut(s) 117, 697, 1313, 1316, 2727, 2852
Sau96I GGNCC 3 cut(s) 602, 694, 751
SchI GAGTC 5 cut(s) 215, 285, 695, 1387, 2431
ScrFI CCNGG 2 cut(s) 2274, 2647
SduI GDGCHC 4 cut(s) 212, 299, 1037, 2281
SexAI ACCWGGT 1 cut(s) 2272
SfaNI GCATC 4 cut(s) 914, 1299, 2472, 2534
SfcI CTRYAG 5 cut(s) 114, 618, 812, 2097, 2849
SfuI TTCGAA 1 cut(s) 1022
SinI GGWCC 2 cut(s) 602, 751
SmiMI CAYNNNNRTG 2 cut(s) 2519, 2628
SmlI CTYRAG 6 cut(s) 292, 1738, 1989, 2311, 2359, 2476
SmoI CTYRAG 6 cut(s) 292, 1738, 1989, 2311, 2359, 2476
SpeI ACTAGT 2 cut(s) 995, 2951
SseBI AGGCCT 1 cut(s) 990
SsiI CCGC 4 cut(s) 258, 605, 697, 1315
SspI AATATT 1 cut(s) 1221
SstI GAGCTC 2 cut(s) 212, 299
StuI AGGCCT 1 cut(s) 990
StyD4I CCNGG 2 cut(s) 2272, 2645
StyI CCWWGG 2 cut(s) 718, 1029
TaaI ACNGT 5 cut(s) 386, 1039, 2576, 2716, 3096
TaqI TCGA 1 cut(s) 1022
TaqII GACCGA 1 cut(s) 161
TatI WGTACW 2 cut(s) 1039, 2775
TauI GCSGC 2 cut(s) 699, 1318
TfiI GAWTC 6 cut(s) 1012, 1139, 1494, 2224, 2332, 3047
TseFI GTSAC 7 cut(s) 250, 266, 687, 875, 1170, 2471, 2755
TseI GCWGC 4 cut(s) 116, 1312, 2726, 2851
Tsp45I GTSAC 7 cut(s) 250, 266, 687, 875, 1170, 2471, 2755
TspDTI ATGAA 8 cut(s) 67, 438, 1713, 1993, 2157, 2247, 2534, 2641
Van91I CCANNNNNTGG 1 cut(s) 2738
VpaK11BI GGWCC 2 cut(s) 602, 751
VspI ATTAAT 1 cut(s) 54
XagI CCTNNNNNAGG 1 cut(s) 330
XceI RCATGY 2 cut(s) 2627, 2836
XmiI GTMKAC 2 cut(s) 2214, 2788
XmnI GAANNNNTTC 3 cut(s) 1268, 1683, 1800
Zsp2I ATGCAT 2 cut(s) 2878, 2969
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.