MD13G1088400.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
6190439 .. 6193977
3539 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1088400.v1.1.491

Sequence Viewer

Length: 2955 bp
ATGGGGTTTTTGGCCGTGAGATTGGTTATTTTACACTCACTTTTTAACGTATTTCTCTGCTGCTTCAGCTTCTCCATGCATCCGAAACTAGGCGGGAACGAAACAGACAGGATGGCGTTGTTGGCCATCAAAGCGCAGATAAAGGAGGACCCCGACCAGTTCCTGAGTTCATGGAACGAATCATATCACTTCTGCCTATGGCAAGGTGTCACATGCAGCCAACGACATCACCAAAGGATCACTAGGTTAAACCTAGGGAACCAAAACTTGGTGGGTACCATATCCCCACACATAGGAAATCTAAGCTTCCTCAGGGTACTACGTTTGAGCGACAACCGTTTGTCGGGTCAAATTCCACCAGAAATGGGGCGTTTGCGCAGATTGCAGGTATTAAATTTGACCCAAAACTCACTCAGTGGTGTTATTCCTGTCAATATGTCCAATTGTCTTGACCTCATCGGTTTCCATTCAGGCTTCAATCATTTGGTGGGTAAAATTCCTATAGAGTTTGGCTCCTTTCCTAAACTTGAAAAACTTGTTCTTCAACGCAACACTTTGTCAGGGGCAATCCCTGATTCCTTGGGGAACATTTCATCACTTGATGTTTTTGCATTTTACGACAATCACTTGTCAGGTGACATCCCTAGTTCCCTAGGTCAGTTGAAAAAATTGAGATTTTTCTCATTAGGTTCAAATAAGTTGTCTGGTATTAGAATTGGCTACAATTTTCCAAATCTCAAAGTATTTCACATTACCGGGAATCAATTCTCAGGGTCCATTCCTATATCAATATCCAATGCCACAAATCTAGTGCAATTTGAAGTTTCAGATAACAAACTAACCGGACAAGTTCCAAATCTACAAAAGCTTTGTAACCTCGAAACGCTCCTTCTAGATTCAAACCGCCTTGGAACCGGTACAAATGGGGACTTGAGTTTTGTTTCGGACTTGAGCAATGCCACGAAGTTTAGGTGGTTGGTTACACAGACTAACAATTTTGGAGGGGTGCTGCCCACAGCCATATCCAATCTCTCAACCACGCTTGAAATCCTTTGGGTTGGAGGAAACCAACTCTATGGAAACATCCCAGCCGGGATAACCAGTCTAGTCAGCTTGAAATTATTAGTTATGGGGAATAACCACTTGACAGGTAATAACCCCACTGATATTGGCAAGCTTACAAGGCTTCGGAAGTTGCGTCTTTTTACCAACAAATTATCAGGGAGCATTCCATCCACTCTAGGAAATTTAACGATGCTAGATACACTTGAATTGCAAGGAAATAATCTTCATGGTGACATCCCTTCAAGCCTAGGGAAATGCCAGAGCCTATTGCAATTGGATATTTCGCAAAATAACCTCAATGACACAATACCTCAGCAAGTTTTTGAGCTCACCTCCTTATCGCTTTCGTTCAACTTGTCTAGAAACCGCTTAACCGGTTCTCTTCCATTGGAGATCGGGAAATTGAGCAGTTTAGGCAAATTGGACTTCTCGGACAACTTCTTGTCAGGAGAACTTCCCAATACTCTTGGAGGTTGTGTAGATTTAGAAGTCCTACACTTTCAAGGCAACTTCTTCAACGGGACCATTCCTTCTTCATTGAGTTCATTGAGAGGGATTGAGGATTTAGACCTTTCTCGCAACAATTTGTCCGGCGAAATTCCAAAGTTTTTGGAGGGCTTTGCTTTCTTGAAGAATCTCAACCTATTTTTCAATCGACTTTCGGGAACAGTACCGATTGAAGGTGTTTTCAAAAATGCAACTGCAACTTCAATTGTTGGAAACACCGGGCTCTGTAGCGATATTGGTAATCTCCAACTTCCCAAGTGCAAGAATAAGGGCAGATTGTCTCCTAGATTGAAACTAATAATCTCTTTTGTAGCTGGGTTTGCCTTTCTGGGAATGGTTATAGTGTTGTCATTACTGTTTGTTCGTTCATCAAGAAAGAAAGGGAAAGGAGCAGGTCCAAGTGCTTTGGGGAACTCTACTTTTCAAGTGTCATATAACGCCCTCTTGAAGGCTACTGATGGGTTCTCCTCAACTAATCTGATTGGCATGGGCAGCTTCGGGTCCGTGTATAAAGGAGTTCTTGATGATGACAATGGAACTCGTCAGCTTGTAGCGGTCAAGGTGTTTAACATGTTACGCCAGGGAGCCTCTAAGAGTTTCATAGCCGAATGTGAGGCGATGAGAAATATCAGACATCGGAATCTTGTCAAGGTTGTAACGGCTTGTTCAAGTGTGGACTTTTCTGGTAATAATTTCAAGGCTTTAGTTTATGAGCTCGTGGACAATGGGAGCTTAGAGGAGTGGTTGCATCCAACAGCCGGAACACCCAAAAATTTAAGTTTTCTTCAGAGGCTAGACATTGCCATTGATGTTGCTTGTGCATTGGATTATCTTCATAATCACTGCGAGGCACCAATTGTCCATTGTGATCTCAAGCCTAGCAATGTTCTTTTGGGAAACGACTTGACTGGACTTGTTTCTGATTTTGGACTGGCAAGATTTCTCTCAAACCTGACCAGTAGCGTTGCGGAAAGTCAGACAAGTTCCATTGGAATACGAGGAACGGTTGGTTATGCTGCTCCAGAGTATGGCATGGGAAGCAAGATTGCAACATGTGGGGATGTCTACAGCTTTGGTATTCTCTTGTTAGAGATGTTTACAGGGAAGAGACCCACCGACCCTATGTTTAGTGACGGCTTGAACCTTCACAATTTTGTAAAGATGGATTTGCCACATCGAGTTGCAGAAATTGCAGATTCACTATTCGACCCTATTACTTCCAACCAAAGCAGCATCATCAGTGCTGAAAAAATCCAAGTGTGTTTGAGTTCAATATTTAATATCGGAATCTCGTGCTCTGATGAATCCCCGAGAGACCGAAAGGATATGAGTGATGTTGTAACTGAGATGCAATCCATCAGGGACCTTCTGTCCTCGGCCTGA

Protein Analysis

985

Amino Acids

107.06

Weight (kDa)

8.42

Isoelectric Point (pI)

28.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 73 1.9e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 90 - 296 2.5e-10 Leucine-rich repeat region
LRR_14 PF23598 315 - 426 7e-08 Leucine-rich repeat region
Pkinase PF00069 681 - 901 4.2e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 683 - 972 2e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 377
Acc36I ACCTGC 2 cut(s) 376, 1955
Acc65I GGTACC 1 cut(s) 275
AccB1I GGYRCC 2 cut(s) 275, 2422
AccB7I CCANNNNNTGG 2 cut(s) 268, 2600
AccI GTMKAC 1 cut(s) 2637
AciI CCGC 5 cut(s) 93, 904, 1432, 2126, 2540
AclWI GGATC 1 cut(s) 245
AcoI YGGCCR 2 cut(s) 12, 123
AcsI RAATTY 6 cut(s) 351, 394, 495, 1246, 1662, 2344
AcuI CTGAAG 2 cut(s) 49, 2342
AdeI CACNNNGTG 1 cut(s) 416
AfaI GTAC 4 cut(s) 277, 318, 919, 1737
AfiI CCNNNNNNNGG 9 cut(s) 89, 268, 293, 343, 365, 1745, 2020, 2330, 2600
AflIII ACRYGT 2 cut(s) 2142, 2624
AgeI ACCGGT 2 cut(s) 914, 1439
AhdI GACNNNNNGTC 1 cut(s) 2941
AjnI CCWGG 1 cut(s) 2151
AjuI GAANNNNNNNTTGG 2 cut(s) 251, 283
Alw21I GWGCWC 3 cut(s) 1395, 2289, 2870
Alw26I GTCTC 3 cut(s) 1857, 2674, 2880
AlwI GGATC 1 cut(s) 245
AlwNI CAGNNNCTG 1 cut(s) 163
Ama87I CYCGRG 1 cut(s) 2881
AoxI GGCC 3 cut(s) 12, 123, 2949
ApeKI GCWGC 6 cut(s) 60, 216, 1009, 2064, 2588, 2802
ApoI RAATTY 6 cut(s) 351, 394, 495, 1246, 1662, 2344
ArsI GACNNNNNNTTYG 4 cut(s) 686, 718, 920, 952
AsiGI ACCGGT 2 cut(s) 914, 1439
Asp700I GAANNNNTTC 1 cut(s) 764
Asp718I GGTACC 1 cut(s) 275
AspA2I CCTAGG 3 cut(s) 253, 652, 1312
AspLEI GCGC 2 cut(s) 136, 378
AspS9I GGNCC 6 cut(s) 148, 774, 1587, 1967, 2073, 2935
AsuC2I CCSGG 3 cut(s) 757, 1093, 1792
AsuHPI GGTGA 4 cut(s) 221, 647, 1307, 1387
AvaI CYCGRG 1 cut(s) 2881
AvaII GGWCC 6 cut(s) 148, 774, 1587, 1967, 2073, 2935
AvrII CCTAGG 3 cut(s) 253, 652, 1312
AxyI CCTNAGG 1 cut(s) 311
BalI TGGCCA 1 cut(s) 125
BanI GGYRCC 2 cut(s) 275, 2422
BanII GRGCYC 3 cut(s) 1395, 1797, 2289
BauI CACGAG 2 cut(s) 2288, 2863
Bbv12I GWGCWC 3 cut(s) 1395, 2289, 2870
BbvCI CCTCAGC 1 cut(s) 1377
BbvI GCAGC 6 cut(s) 47, 228, 996, 2076, 2575, 2814
BccI CCATC 6 cut(s) 106, 134, 1240, 2024, 2728, 2936
BceAI ACGGC 2 cut(s) 2247, 2722
BciT130I CCWGG 1 cut(s) 2153
BcnI CCSGG 3 cut(s) 757, 1093, 1792
BcoDI GTCTC 3 cut(s) 1857, 2674, 2880
BfmI CTRYAG 3 cut(s) 501, 1798, 2638
BfuAI ACCTGC 2 cut(s) 376, 1955
BisI GCNGC 6 cut(s) 61, 217, 1010, 2065, 2589, 2803
BlnI CCTAGG 3 cut(s) 253, 652, 1312
BlsI GCNGC 6 cut(s) 62, 218, 1011, 2066, 2590, 2804
Bme1390I CCNGG 4 cut(s) 757, 1093, 1792, 2153
Bme18I GGWCC 6 cut(s) 148, 774, 1587, 1967, 2073, 2935
BmeRI GACNNNNNGTC 1 cut(s) 2941
BmeT110I CYCGRG 1 cut(s) 2881
BmgT120I GGNCC 6 cut(s) 148, 774, 1587, 1967, 2073, 2935
BmrFI CCNGG 4 cut(s) 757, 1093, 1792, 2153
BmsI GCATC 5 cut(s) 88, 1245, 2329, 2814, 2910
BplI GAGNNNNNCTC 4 cut(s) 497, 529, 1382, 1414
BpmI CTGGAG 1 cut(s) 2577
Bpu10I CCTNAGC 1 cut(s) 1377
BpuEI CTTGAG 3 cut(s) 952, 970, 2429
BpuMI CCSGG 3 cut(s) 757, 1093, 1792
BsaI GGTCTC 2 cut(s) 2674, 2880
BsaJI CCNNGG 7 cut(s) 253, 579, 652, 907, 1312, 2152, 2946
BsaWI WCCGGW 3 cut(s) 842, 914, 1439
BsaXI ACNNNNNCTCC 2 cut(s) 1527, 1557
Bsc4I CCNNNNNNNGG 9 cut(s) 89, 268, 293, 343, 365, 1745, 2020, 2330, 2600
Bse118I RCCGGY 2 cut(s) 914, 1439
Bse1I ACTGG 5 cut(s) 157, 1101, 2485, 2508, 2529
Bse21I CCTNAGG 1 cut(s) 311
Bse3DI GCAATG 3 cut(s) 961, 2370, 2461
BseBI CCWGG 1 cut(s) 2153
BseDI CCNNGG 7 cut(s) 253, 579, 652, 907, 1312, 2152, 2946
BseGI GGATG 8 cut(s) 79, 117, 639, 1083, 1232, 1299, 2320, 2638
BseLI CCNNNNNNNGG 9 cut(s) 89, 268, 293, 343, 365, 1745, 2020, 2330, 2600
BseMI GCAATG 3 cut(s) 961, 2370, 2461
BseMII CTCAG 6 cut(s) 155, 325, 427, 783, 1391, 2907
BseNI ACTGG 5 cut(s) 157, 1101, 2485, 2508, 2529
BseRI GAGGAG 2 cut(s) 2029, 2324
BseXI GCAGC 6 cut(s) 47, 228, 996, 2076, 2575, 2814
BseYI CCCAGC 2 cut(s) 1087, 1886
BshFI GGCC 3 cut(s) 14, 125, 2951
BshNI GGYRCC 2 cut(s) 275, 2422
BshTI ACCGGT 2 cut(s) 914, 1439
BsiHKAI GWGCWC 3 cut(s) 1395, 2289, 2870
BsiHKCI CYCGRG 1 cut(s) 2881
BsiSI CCGG 8 cut(s) 756, 843, 915, 1092, 1440, 1656, 1791, 2331
BslFI GGGAC 3 cut(s) 941, 1600, 2948
BslI CCNNNNNNNGG 9 cut(s) 89, 268, 293, 343, 365, 1745, 2020, 2330, 2600
BsmAI GTCTC 3 cut(s) 1857, 2674, 2880
BsmFI GGGAC 3 cut(s) 941, 1600, 2948
BsmI GAATGC 1 cut(s) 1227
BsnI GGCC 3 cut(s) 14, 125, 2951
Bso31I GGTCTC 2 cut(s) 2674, 2880
BsoBI CYCGRG 1 cut(s) 2881
Bsp1286I GDGCHC 4 cut(s) 1395, 1797, 2289, 2870
Bsp143I GATC 3 cut(s) 237, 1458, 2440
BspACI CCGC 5 cut(s) 93, 904, 1432, 2126, 2540
BspANI GGCC 3 cut(s) 14, 125, 2951
BspCNI CTCAG 6 cut(s) 156, 324, 426, 782, 1390, 2908
BspMI ACCTGC 2 cut(s) 376, 1955
BspPI GGATC 1 cut(s) 245
BspT107I GGYRCC 2 cut(s) 275, 2422
BspTNI GGTCTC 2 cut(s) 2674, 2880
BsrDI GCAATG 3 cut(s) 961, 2370, 2461
BsrFI RCCGGY 2 cut(s) 914, 1439
BsrI ACTGG 5 cut(s) 157, 1101, 2485, 2508, 2529
BssAI RCCGGY 2 cut(s) 914, 1439
BssECI CCNNGG 7 cut(s) 253, 579, 652, 907, 1312, 2152, 2946
BssMI GATC 3 cut(s) 237, 1458, 2440
BssSI CACGAG 2 cut(s) 2288, 2863
BssT1I CCWWGG 5 cut(s) 253, 579, 652, 907, 1312
Bst2BI CACGAG 2 cut(s) 2288, 2863
Bst2UI CCWGG 1 cut(s) 2153
Bst4CI ACNGT 4 cut(s) 338, 1735, 1929, 2578
Bst6I CTCTTC 2 cut(s) 1452, 2672
BstAPI GCANNNNNTGC 1 cut(s) 2762
BstC8I GCNNGC 1 cut(s) 1175
BstDEI CTNAG 9 cut(s) 164, 302, 311, 413, 769, 1377, 2163, 2305, 2916
BstENI CCTNNNNNAGG 1 cut(s) 2018
BstF5I GGATG 8 cut(s) 79, 117, 639, 1083, 1232, 1299, 2320, 2638
BstHHI GCGC 2 cut(s) 136, 378
BstKTI GATC 3 cut(s) 240, 1461, 2443
BstMAI GTCTC 3 cut(s) 1857, 2674, 2880
BstMBI GATC 3 cut(s) 237, 1458, 2440
BstNI CCWGG 1 cut(s) 2153
BstNSI RCATGY 3 cut(s) 216, 2146, 2628
BstSCI CCNGG 4 cut(s) 755, 1091, 1790, 2151
BstSFI CTRYAG 3 cut(s) 501, 1798, 2638
BstV1I GCAGC 6 cut(s) 47, 228, 996, 2076, 2575, 2814
BstXI CCANNNNNNTGG 1 cut(s) 1076
Bsu36I CCTNAGG 1 cut(s) 311
BsuRI GGCC 3 cut(s) 14, 125, 2951
BtgZI GCGATG 1 cut(s) 2204
BtsCI GGATG 8 cut(s) 79, 117, 639, 1083, 1232, 1299, 2320, 2638
BtsI GCAGTG 1 cut(s) 2413
BtsIMutI CAGTG 4 cut(s) 421, 1161, 2413, 2818
BveI ACCTGC 2 cut(s) 376, 1955
Cac8I GCNNGC 1 cut(s) 1175
CaiI CAGNNNCTG 1 cut(s) 163
CfoI GCGC 2 cut(s) 136, 378
Cfr10I RCCGGY 2 cut(s) 914, 1439
Cfr13I GGNCC 6 cut(s) 148, 774, 1587, 1967, 2073, 2935
CseI GACGC 1 cut(s) 1187
Csp6I GTAC 4 cut(s) 276, 317, 918, 1736
CspAI ACCGGT 2 cut(s) 914, 1439
CspCI CAANNNNNGTGG 2 cut(s) 1150, 1185
CviAII CATG 8 cut(s) 76, 171, 213, 1292, 2059, 2143, 2605, 2625
CviQI GTAC 4 cut(s) 276, 317, 918, 1736
DdeI CTNAG 9 cut(s) 164, 302, 311, 413, 769, 1377, 2163, 2305, 2916
DpnI GATC 3 cut(s) 239, 1460, 2442
DpnII GATC 3 cut(s) 237, 1458, 2440
DraIII CACNNNGTG 1 cut(s) 416
DriI GACNNNNNGTC 1 cut(s) 2941
EaeI YGGCCR 2 cut(s) 12, 123
Eam1104I CTCTTC 2 cut(s) 1452, 2672
Eam1105I GACNNNNNGTC 1 cut(s) 2941
EarI CTCTTC 2 cut(s) 1452, 2672
Ecl136II GAGCTC 2 cut(s) 1393, 2287
Eco130I CCWWGG 5 cut(s) 253, 579, 652, 907, 1312
Eco24I GRGCYC 3 cut(s) 1395, 1797, 2289
Eco31I GGTCTC 2 cut(s) 2674, 2880
Eco47I GGWCC 6 cut(s) 148, 774, 1587, 1967, 2073, 2935
Eco53kI GAGCTC 2 cut(s) 1393, 2287
Eco57I CTGAAG 2 cut(s) 49, 2342
Eco81I CCTNAGG 1 cut(s) 311
Eco88I CYCGRG 1 cut(s) 2881
EcoICRI GAGCTC 2 cut(s) 1393, 2287
EcoNI CCTNNNNNAGG 1 cut(s) 2018
EcoO109I RGGNCCY 2 cut(s) 148, 2935
EcoRII CCWGG 1 cut(s) 2151
EcoT14I CCWWGG 5 cut(s) 253, 579, 652, 907, 1312
EcoT22I ATGCAT 1 cut(s) 81
EcoT38I GRGCYC 3 cut(s) 1395, 1797, 2289
ErhI CCWWGG 5 cut(s) 253, 579, 652, 907, 1312
FaeI CATG 8 cut(s) 79, 174, 216, 1295, 2062, 2146, 2608, 2628
FalI AAGNNNNNCTT 2 cut(s) 2076, 2108
FaqI GGGAC 3 cut(s) 941, 1600, 2948
FatI CATG 8 cut(s) 75, 170, 212, 1291, 2058, 2142, 2604, 2624
FauI CCCGC 1 cut(s) 86
FblI GTMKAC 1 cut(s) 2637
Fnu4HI GCNGC 6 cut(s) 61, 217, 1010, 2065, 2589, 2803
FokI GGATG 8 cut(s) 66, 124, 626, 1070, 1219, 1286, 2307, 2645
FriOI GRGCYC 3 cut(s) 1395, 1797, 2289
Fsp4HI GCNGC 6 cut(s) 61, 217, 1010, 2065, 2589, 2803
FspI TGCGCA 1 cut(s) 377
GlaI GCGC 2 cut(s) 135, 377
GluI GCNGC 6 cut(s) 61, 217, 1010, 2065, 2589, 2803
GsaI CCCAGC 2 cut(s) 1091, 1890
GsuI CTGGAG 1 cut(s) 2577
HaeIII GGCC 3 cut(s) 14, 125, 2951
HapII CCGG 8 cut(s) 756, 843, 915, 1092, 1440, 1656, 1791, 2331
HgaI GACGC 1 cut(s) 1187
HhaI GCGC 2 cut(s) 136, 378
Hin1II CATG 8 cut(s) 79, 174, 216, 1295, 2062, 2146, 2608, 2628
Hin6I GCGC 2 cut(s) 134, 376
HinP1I GCGC 2 cut(s) 134, 376
HindIII AAGCTT 3 cut(s) 304, 866, 1175
HinfI GANTC 9 cut(s) 179, 575, 760, 896, 1699, 2212, 2768, 2859, 2876
HpaII CCGG 8 cut(s) 756, 843, 915, 1092, 1440, 1656, 1791, 2331
HphI GGTGA 4 cut(s) 221, 647, 1307, 1387
Hpy166II GTNNAC 4 cut(s) 2248, 2293, 2638, 2670
Hpy8I GTNNAC 4 cut(s) 2248, 2293, 2638, 2670
HpyAV CCTTC 7 cut(s) 899, 1314, 1605, 1739, 2014, 2726, 2948
HpyCH4III ACNGT 4 cut(s) 338, 1735, 1929, 2578
HpyCH4IV ACGT 2 cut(s) 48, 322
HpyF3I CTNAG 9 cut(s) 164, 302, 311, 413, 769, 1377, 2163, 2305, 2916
HpySE526I ACGT 2 cut(s) 48, 322
Hsp92II CATG 8 cut(s) 79, 174, 216, 1295, 2062, 2146, 2608, 2628
HspAI GCGC 2 cut(s) 134, 376
KpnI GGTACC 1 cut(s) 279
Kzo9I GATC 3 cut(s) 237, 1458, 2440
LmnI GCTCC 7 cut(s) 518, 891, 1224, 1961, 2156, 2301, 2596
Lsp1109I GCAGC 6 cut(s) 47, 228, 996, 2076, 2575, 2814
LweI GCATC 5 cut(s) 88, 1245, 2329, 2814, 2910
MaeII ACGT 2 cut(s) 48, 322
MaeIII GTNAC 9 cut(s) 208, 635, 872, 979, 1295, 2145, 2227, 2702, 2911
MalI GATC 3 cut(s) 239, 1460, 2442
MboI GATC 3 cut(s) 237, 1458, 2440
MboII GAAGA 9 cut(s) 533, 1280, 1439, 1570, 1590, 1708, 2348, 2396, 2689
MfeI CAATTG 4 cut(s) 442, 1337, 1776, 2427
MhlI GDGCHC 4 cut(s) 1395, 1797, 2289, 2870
MlsI TGGCCA 1 cut(s) 125
MluNI TGGCCA 1 cut(s) 125
MmeI TCCRAC 5 cut(s) 1039, 1762, 1843, 2348, 2817
Mox20I TGGCCA 1 cut(s) 125
Mph1103I ATGCAT 1 cut(s) 81
MroXI GAANNNNTTC 1 cut(s) 764
MscI TGGCCA 1 cut(s) 125
MseI TTAA 8 cut(s) 45, 248, 392, 1250, 1436, 2139, 2348, 2850
Msp20I TGGCCA 1 cut(s) 125
MspI CCGG 8 cut(s) 756, 843, 915, 1092, 1440, 1656, 1791, 2331
MspR9I CCNGG 4 cut(s) 757, 1093, 1792, 2153
MunI CAATTG 4 cut(s) 442, 1337, 1776, 2427
Mva1269I GAATGC 1 cut(s) 1227
MvaI CCWGG 1 cut(s) 2153
NciI CCSGG 3 cut(s) 757, 1093, 1792
NdeII GATC 3 cut(s) 237, 1458, 2440
NlaIII CATG 8 cut(s) 79, 174, 216, 1295, 2062, 2146, 2608, 2628
NmeAIII GCCGAG 1 cut(s) 2927
NmuCI GTSAC 4 cut(s) 208, 635, 1295, 2702
NsbI TGCGCA 1 cut(s) 377
NsiI ATGCAT 1 cut(s) 81
NspI RCATGY 3 cut(s) 216, 2146, 2628
PciI ACATGT 2 cut(s) 2142, 2624
PcsI WCGNNNNNNNCGW 1 cut(s) 1195
PctI GAATGC 1 cut(s) 1227
PdmI GAANNNNTTC 1 cut(s) 764
PfeI GAWTC 9 cut(s) 179, 575, 760, 896, 1699, 2212, 2768, 2859, 2876
PflMI CCANNNNNTGG 2 cut(s) 268, 2600
PinAI ACCGGT 2 cut(s) 914, 1439
PkrI GCNGC 6 cut(s) 62, 218, 1011, 2066, 2590, 2804
PpuMI RGGWCCY 2 cut(s) 148, 2935
PscI ACATGT 2 cut(s) 2142, 2624
Psp124BI GAGCTC 2 cut(s) 1395, 2289
Psp5II RGGWCCY 2 cut(s) 148, 2935
Psp6I CCWGG 1 cut(s) 2151
PspFI CCCAGC 2 cut(s) 1087, 1886
PspGI CCWGG 1 cut(s) 2151
PspPI GGNCC 6 cut(s) 148, 774, 1587, 1967, 2073, 2935
PspPPI RGGWCCY 2 cut(s) 148, 2935
PstNI CAGNNNCTG 1 cut(s) 163
RsaI GTAC 4 cut(s) 277, 318, 919, 1737
RsaNI GTAC 4 cut(s) 276, 317, 918, 1736
SacI GAGCTC 2 cut(s) 1395, 2289
SaqAI TTAA 8 cut(s) 45, 248, 392, 1250, 1436, 2139, 2348, 2850
SatI GCNGC 6 cut(s) 61, 217, 1010, 2065, 2589, 2803
Sau3AI GATC 3 cut(s) 237, 1458, 2440
Sau96I GGNCC 6 cut(s) 148, 774, 1587, 1967, 2073, 2935
ScrFI CCNGG 4 cut(s) 757, 1093, 1792, 2153
SduI GDGCHC 4 cut(s) 1395, 1797, 2289, 2870
SfaNI GCATC 5 cut(s) 88, 1245, 2329, 2814, 2910
SfcI CTRYAG 3 cut(s) 501, 1798, 2638
SinI GGWCC 6 cut(s) 148, 774, 1587, 1967, 2073, 2935
SmlI CTYRAG 3 cut(s) 931, 949, 2444
SmoI CTYRAG 3 cut(s) 931, 949, 2444
SsiI CCGC 5 cut(s) 93, 904, 1432, 2126, 2540
SspI AATATT 1 cut(s) 2847
SstI GAGCTC 2 cut(s) 1395, 2289
StyD4I CCNGG 4 cut(s) 755, 1091, 1790, 2151
StyI CCWWGG 5 cut(s) 253, 579, 652, 907, 1312
TaaI ACNGT 4 cut(s) 338, 1735, 1929, 2578
TaiI ACGT 2 cut(s) 51, 325
TaqI TCGA 4 cut(s) 879, 1720, 2749, 2778
TaqII GACCGA 1 cut(s) 2904
TfiI GAWTC 9 cut(s) 179, 575, 760, 896, 1699, 2212, 2768, 2859, 2876
Tru1I TTAA 8 cut(s) 45, 248, 392, 1250, 1436, 2139, 2348, 2850
Tru9I TTAA 8 cut(s) 45, 248, 392, 1250, 1436, 2139, 2348, 2850
TscAI CASTG 4 cut(s) 421, 1168, 2420, 2818
TseFI GTSAC 4 cut(s) 208, 635, 1295, 2702
TseI GCWGC 6 cut(s) 60, 216, 1009, 2064, 2588, 2802
Tsp45I GTSAC 4 cut(s) 208, 635, 1295, 2702
TspDTI ATGAA 9 cut(s) 159, 582, 1280, 1590, 1599, 1929, 2161, 2396, 2889
TspGWI ACGGA 1 cut(s) 2065
TspRI CASTG 4 cut(s) 421, 1168, 2420, 2818
Van91I CCANNNNNTGG 2 cut(s) 268, 2600
VpaK11BI GGWCC 6 cut(s) 148, 774, 1587, 1967, 2073, 2935
XagI CCTNNNNNAGG 1 cut(s) 2018
XapI RAATTY 6 cut(s) 351, 394, 495, 1246, 1662, 2344
XbaI TCTAGA 2 cut(s) 892, 1424
XceI RCATGY 3 cut(s) 216, 2146, 2628
XmaJI CCTAGG 3 cut(s) 253, 652, 1312
XmiI GTMKAC 1 cut(s) 2637
XmnI GAANNNNTTC 1 cut(s) 764
Zsp2I ATGCAT 1 cut(s) 81
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.