Rw1G022880
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
48398458 .. 48401668
3211 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G022880.1

Sequence Viewer

Length: 2895 bp
ATGGGGGGAGATTTGGTTATGAAATTGGTTTTGATACACTCATTAGTTTTAAATTCCATGTCCATTTTCTGTTGTAGCTCCATGGAATTGAACCATCCGAGACTTGAAGGGAATGAGACGGATAGGCTGGCATTGCTAGCAATCAAAGCTCAAATACAACACGATCCCAGCTCGGTCACAAGCTCATGGAATGAAACCCTTCACTTTTGCCTGTGGCACGGCGTCACCTGCAGTCGACGACATCGCCAAAGGGTGACGAAGCTGGAGCTAGGGTCTCTAACTTTGGTGGGATCCATATCTCCACACATAGGAAATCTAAGCTTCTTAAGAGTGCTAAATCTCCAGAACAATAGCTTCACTCATCAAATCCCTCCTCAAATTGGGCATTTGCATAGACTGCAGGTATTGCATCTAAACAATAACTCATTTACTGGCACCATTCCTGCCAATATATCCAATTTCTTCAAACTCATCACTCTCCGTCTTGATACAAACAATCTAGTGGGTAAAATTCCTCCCGAACTGAGTTCCTTGTCAAAGCTTCGACTTTTAATTTTGCAAACCAACAATTTAACAGGAGAGATCCCTCCTTCTTTGGGGAACCTTTCATCGCTAGAGATATTTAGTATAACAAATAATAACTTAGAAGGCAGCATCCCTAGTTCTCTATGCCAGTTGAAAAGATTAACAAGTATCTATTTAGGCTCAAATAGGTTATCTGGTATCATCCCTTCCTGCATTTACAACCTCTCTGCTATGGTTCTTTTCGACGTAAGAGCAAACCAAATTCAAGGAAGTCTTCCATCAAACTTGAGCAATGCTTTTCCCAACCTTCAAATCTTTTCCATCAGCGACAATCAATTTACCGGGGCCATCCCTTCGTCAATATCCAATGCAACAAATCTTGTGGTGTTTCAGTGTAATTTCAACAAACTCACTCGACAGGTGCCAAATTTACGAAATCTTCATAACCTTCGAGTATTCCTTGTCGATAATAATAATCTTGGAAGCGGTAAAGATGGTGACTTGAGTTTTGTCTCAGAATTGATCAATGCCACACAGCTAACTTCTTTGAATATCCAGTACAACAATTTTGGAGGGACGTTGCCCAAATCAATATCCAATCTCTCAACCAATCTCCAAATGTTCGTGGTCGGTGAAAACCAACTACATGGAAGCATCCCAACTGGATTAGGCAATCTTGTCAACCTGCAATTACTCCATATGGGAGGAAACTCCTTCACAGGTAGCATCCCCATAGACATTGGGCAGCTTTCAGGGCTTGGGCGGTTGCTTCTTGACAACAACCAATTGTCAGGAAGCATTCCATCTTCTCTTGGAAATTTAACACAGTTAATAGTTCTCTATTTGCACGAAAATAATCTAGATGGTAGCATCCCGTCCAGCCTAGGGAAATGCCACTGGTTAATCGGATTGCGTCTTTCCAGAAACAATCTGAATGGCACGATACCGCCCCAAGTTATTGGCCTTTCATCTTTATCAACAATTTTAGCATTGGATGGAAACCAATTCACTGGTTCCCTTCCTACGGAGATTGGAAAATTGAAGAATATTCCACAATTTCTTGAGAATCTGAACTTGGAGTACCTGAACCTCTCCTTCAACCAGTTTTGGGGAGCAGTACCAACTGGCGGTGTTTTTAAGAATGCAACTGCGACTTCAGTTGCTGGAAACGCTAGACTCTGCGGAGGTATGGCTAGTCTTCGACTTCCTCTGTGCAAGCTTAATGACTCTAAAGGAGAAAGGCTGTCTCATAGAATGAAACTTATGATCTCTTTAGTCTCTGGGTTCACTCTATTGGGACTGGTTGTGGTGCTATCTCTTTTTCTTCTTGGTAAGAAAAGGAGAGAAACTAATTTAAGCAGTTTGGGGAACTCTGTTTTGCAAGTTTCATATGCTACACTCCTCAAAGCTACCGATGGTTTTTCTTCAGCTAATTTGATTGGTGTGGGTGCTTTTGGGTCTGTGTACAAAGGAATCCTTGCTGATGATAGAGTTGTTGTTGCTGTGAAGGTGCTTAACATGCTACACCGGGGAGCAGCTAAGAGTTTCATGGCCGAATGTGAGGCATTGAGAAATATCAGACATCGAAATTTGGTCAAGATCTTAACTGCATGTTCAAGTATTGATTTTGGCGGCAATGATTTCAAGGCTCTTGTTTACGAGTTCATGGACAACGGGAGCTTGGAAGATTGGTTGCATCCATCTAGTGGAACTAGAGAGGTAACAGAAGCACCCAAAAGTTTAAGTCTTATTCAGAGGCTCAACATTGCCATTGATGTTGCCAGTGCATTGGATTATCTTCACAACCATTGTGAAACACCGATCGTTCATTGTGATCTCAAGCCAAGTAATGTTCTCTTGGATGGTGACCTGACTGGACATGTTTCTGACTTTGGGTTGTCAAGGTTTCTCTCAGAACCAACCATGACTGTTTCTGGAAATCAATCAAGCTCCATTGGAATTAGAGGATCGGTTGGTTATGCTGCACCAGAGTATGGTATGGGAAGTGAGGTATCCACATACGGGGATGTCTACAGCTTTGGCATTCTCTTGTTAGAAATGTTTACGAGGAAGCAACCCACTGATTACATGTTTAGTGACAGCTTAAATCTTCATAATTATGTGAAGACAGCTCTCCCTGAACTAGTTTCAGAGATTTCAGAATCACTTGTTCTTCAAGAAGGCACCACCAATGTCACTGAAGCTCACAGGCACAGCCGATTGAGTGTGAGAGCACAGAAAATTGAGGAGTGCTTGACTCTGATACTTGGTATAGGAATTGCATGTTCTGTTGAATCCCCCACAAACAGAAAGGATATCAGTGATGTGGCATCTGAATTGCAATCCATTAGGCGCAATCTTCTCAACTAG

Protein Analysis

964

Amino Acids

104.84

Weight (kDa)

8.09

Isoelectric Point (pI)

34.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 78 1.1e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 99 - 188 2.2e-10 Leucine-rich repeat region
LRR_14 PF23598 174 - 253 4.3e-07 Leucine-rich repeat region
Pkinase PF00069 651 - 879 5.1e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 653 - 872 1.1e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 236
Acc36I ACCTGC 3 cut(s) 236, 391, 1218
AccB1I GGYRCC 3 cut(s) 434, 946, 2708
AccB7I CCANNNNNTGG 2 cut(s) 2231, 2519
AccI GTMKAC 2 cut(s) 235, 2556
AciI CCGC 6 cut(s) 1011, 1288, 1472, 1653, 1707, 2157
AclWI GGATC 5 cut(s) 158, 285, 298, 577, 2500
AcoI YGGCCR 1 cut(s) 2076
AcsI RAATTY 6 cut(s) 52, 510, 786, 952, 1342, 2113
AcuI CTGAAG 3 cut(s) 1665, 1935, 2745
AcyI GRCGYC 1 cut(s) 222
AfaI GTAC 4 cut(s) 1085, 1607, 1644, 1991
AflII CTTAAG 1 cut(s) 325
AflIII ACRYGT 2 cut(s) 2404, 2613
AhlI ACTAGT 1 cut(s) 2668
AjuI GAANNNNNNNTTGG 2 cut(s) 1583, 1615
Alw21I GWGCWC 1 cut(s) 2761
Alw26I GTCTC 6 cut(s) 94, 110, 279, 1042, 1776, 1807
AlwI GGATC 5 cut(s) 158, 285, 298, 577, 2500
AlwNI CAGNNNCTG 1 cut(s) 1688
AoxI GGCC 3 cut(s) 870, 1486, 2076
ApeKI GCWGC 4 cut(s) 651, 1270, 2060, 2507
ApoI RAATTY 6 cut(s) 52, 510, 786, 952, 1342, 2113
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
Asp700I GAANNNNTTC 1 cut(s) 198
AspA2I CCTAGG 1 cut(s) 1408
AspLEI GCGC 1 cut(s) 2880
AspS9I GGNCC 1 cut(s) 870
AsuC2I CCSGG 2 cut(s) 868, 2054
AsuHPI GGTGA 5 cut(s) 217, 265, 1034, 1169, 2402
AsuNHI GCTAGC 1 cut(s) 136
AvrII CCTAGG 1 cut(s) 1408
BamHI GGATCC 1 cut(s) 290
BanI GGYRCC 3 cut(s) 434, 946, 2708
BarI GAAGNNNNNNTAC 2 cut(s) 715, 747
BbsI GAAGAC 3 cut(s) 791, 1715, 2657
Bbv12I GWGCWC 1 cut(s) 2761
BbvI GCAGC 4 cut(s) 663, 1282, 2072, 2494
BceAI ACGGC 1 cut(s) 235
BciVI GTATCC 1 cut(s) 2548
BclI TGATCA 1 cut(s) 1047
BcnI CCSGG 2 cut(s) 868, 2054
BcoDI GTCTC 6 cut(s) 94, 110, 279, 1042, 1776, 1807
BcuI ACTAGT 1 cut(s) 2668
BfmI CTRYAG 3 cut(s) 229, 398, 2557
BfrI CTTAAG 1 cut(s) 325
BfuAI ACCTGC 3 cut(s) 236, 391, 1218
BfuI GTATCC 1 cut(s) 2548
BglII AGATCT 1 cut(s) 2124
BisI GCNGC 5 cut(s) 652, 1271, 2061, 2158, 2508
BlnI CCTAGG 1 cut(s) 1408
BlsI GCNGC 5 cut(s) 653, 1272, 2062, 2159, 2509
Bme1390I CCNGG 2 cut(s) 868, 2054
BmgT120I GGNCC 1 cut(s) 870
BmiI GGNNCC 7 cut(s) 292, 436, 602, 871, 948, 1540, 2710
BmrFI CCNGG 2 cut(s) 868, 2054
BmsI GCATC 7 cut(s) 418, 663, 1188, 1260, 1404, 2230, 2864
BmtI GCTAGC 1 cut(s) 140
BpiI GAAGAC 3 cut(s) 791, 1715, 2657
BpmI CTGGAG 2 cut(s) 284, 326
BpuEI CTTGAG 4 cut(s) 832, 1048, 1607, 2348
BpuMI CCSGG 2 cut(s) 868, 2054
BsaBI GATNNNNATC 1 cut(s) 295
BsaHI GRCGYC 1 cut(s) 222
BsaI GGTCTC 1 cut(s) 279
BsaJI CCNNGG 4 cut(s) 81, 867, 1408, 2053
BsaXI ACNNNNNCTCC 3 cut(s) 30, 257, 287
Bse3DI GCAATG 4 cut(s) 131, 823, 2167, 2289
Bse8I GATNNNNATC 1 cut(s) 295
BseDI CCNNGG 4 cut(s) 81, 867, 1408, 2053
BseJI GATNNNNATC 1 cut(s) 295
BseMI GCAATG 4 cut(s) 131, 823, 2167, 2289
BseMII CTCAG 3 cut(s) 515, 1053, 2451
BseRI GAGGAG 3 cut(s) 363, 1916, 2786
BseXI GCAGC 4 cut(s) 663, 1282, 2072, 2494
BseYI CCCAGC 1 cut(s) 167
BsgI GTGCAG 1 cut(s) 2493
Bsh1285I CGRYCG 1 cut(s) 2349
BshFI GGCC 3 cut(s) 872, 1488, 2078
BshNI GGYRCC 3 cut(s) 434, 946, 2708
BsiEI CGRYCG 1 cut(s) 2349
BsiHKAI GWGCWC 1 cut(s) 2761
BsiSI CCGG 2 cut(s) 867, 2053
BslFI GGGAC 2 cut(s) 1114, 1836
BsmAI GTCTC 6 cut(s) 94, 110, 279, 1042, 1776, 1807
BsmBI CGTCTC 1 cut(s) 110
BsmFI GGGAC 2 cut(s) 1114, 1836
BsmI GAATGC 3 cut(s) 1323, 1672, 2568
BsnI GGCC 3 cut(s) 872, 1488, 2078
Bso31I GGTCTC 1 cut(s) 279
Bsp1286I GDGCHC 1 cut(s) 2761
Bsp1407I TGTACA 1 cut(s) 1989
Bsp143I GATC 9 cut(s) 163, 290, 582, 1047, 1791, 2124, 2346, 2359, 2492
Bsp19I CCATGG 1 cut(s) 81
BspACI CCGC 6 cut(s) 1011, 1288, 1472, 1653, 1707, 2157
BspANI GGCC 3 cut(s) 872, 1488, 2078
BspCNI CTCAG 3 cut(s) 516, 1052, 2450
BspLI GGNNCC 7 cut(s) 292, 436, 602, 871, 948, 1540, 2710
BspMAI CTGCAG 2 cut(s) 233, 402
BspMI ACCTGC 3 cut(s) 236, 391, 1218
BspOI GCTAGC 1 cut(s) 140
BspPI GGATC 5 cut(s) 158, 285, 298, 577, 2500
BspT107I GGYRCC 3 cut(s) 434, 946, 2708
BspTI CTTAAG 1 cut(s) 325
BspTNI GGTCTC 1 cut(s) 279
BsrDI GCAATG 4 cut(s) 131, 823, 2167, 2289
BsrGI TGTACA 1 cut(s) 1989
BssECI CCNNGG 4 cut(s) 81, 867, 1408, 2053
BssMI GATC 9 cut(s) 163, 290, 582, 1047, 1791, 2124, 2346, 2359, 2492
BssNI GRCGYC 1 cut(s) 222
BssT1I CCWWGG 2 cut(s) 81, 1408
Bst4CI ACNGT 2 cut(s) 1353, 2455
BstACI GRCGYC 1 cut(s) 222
BstAFI CTTAAG 1 cut(s) 325
BstAPI GCANNNNNTGC 2 cut(s) 397, 406
BstAUI TGTACA 1 cut(s) 1989
BstC8I GCNNGC 3 cut(s) 129, 138, 1742
BstDEI CTNAG 6 cut(s) 317, 524, 643, 1039, 2064, 2437
BstDSI CCRYGG 1 cut(s) 81
BstEII GGTNACC 1 cut(s) 2390
BstHHI GCGC 1 cut(s) 2880
BstKTI GATC 9 cut(s) 166, 293, 585, 1050, 1794, 2127, 2349, 2362, 2495
BstMAI GTCTC 6 cut(s) 94, 110, 279, 1042, 1776, 1807
BstMBI GATC 9 cut(s) 163, 290, 582, 1047, 1791, 2124, 2346, 2359, 2492
BstMCI CGRYCG 1 cut(s) 2349
BstMWI GCNNNNNNNGC 9 cut(s) 133, 137, 146, 228, 397, 406, 1279, 1694, 2044
BstNSI RCATGY 5 cut(s) 2047, 2139, 2408, 2617, 2811
BstPI GGTNACC 1 cut(s) 2390
BstSCI CCNGG 2 cut(s) 866, 2052
BstSFI CTRYAG 3 cut(s) 229, 398, 2557
BstV1I GCAGC 4 cut(s) 663, 1282, 2072, 2494
BstV2I GAAGAC 3 cut(s) 791, 1715, 2657
BstX2I RGATCY 3 cut(s) 290, 582, 2124
BstXI CCANNNNNNTGG 4 cut(s) 1172, 1484, 1535, 2314
BstYI RGATCY 3 cut(s) 290, 582, 2124
BsuI GTATCC 1 cut(s) 2548
BsuRI GGCC 3 cut(s) 872, 1488, 2078
BtgI CCRYGG 1 cut(s) 81
BtgZI GCGATG 2 cut(s) 227, 594
BtsIMutI CAGTG 7 cut(s) 923, 1420, 1533, 2314, 2604, 2721, 2851
BveI ACCTGC 3 cut(s) 236, 391, 1218
Cac8I GCNNGC 3 cut(s) 129, 138, 1742
CaiI CAGNNNCTG 1 cut(s) 1688
CfoI GCGC 1 cut(s) 2880
Cfr13I GGNCC 1 cut(s) 870
CseI GACGC 2 cut(s) 211, 1427
Csp6I GTAC 4 cut(s) 1084, 1606, 1643, 1990
CspCI CAANNNNNGTGG 2 cut(s) 888, 923
CviQI GTAC 4 cut(s) 1084, 1606, 1643, 1990
DdeI CTNAG 6 cut(s) 317, 524, 643, 1039, 2064, 2437
DpnI GATC 9 cut(s) 165, 292, 584, 1049, 1793, 2126, 2348, 2361, 2494
DpnII GATC 9 cut(s) 163, 290, 582, 1047, 1791, 2124, 2346, 2359, 2492
DraI TTTAAA 1 cut(s) 51
EaeI YGGCCR 1 cut(s) 2076
Eco130I CCWWGG 2 cut(s) 81, 1408
Eco31I GGTCTC 1 cut(s) 279
Eco32I GATATC 1 cut(s) 2842
Eco57I CTGAAG 3 cut(s) 1665, 1935, 2745
Eco91I GGTNACC 1 cut(s) 2390
EcoO65I GGTNACC 1 cut(s) 2390
EcoRV GATATC 1 cut(s) 2842
EcoT14I CCWWGG 2 cut(s) 81, 1408
ErhI CCWWGG 2 cut(s) 81, 1408
Esp3I CGTCTC 1 cut(s) 110
FalI AAGNNNNNCTT 4 cut(s) 783, 815, 1986, 2018
FaqI GGGAC 2 cut(s) 1114, 1836
FauNDI CATATG 2 cut(s) 1224, 1915
FbaI TGATCA 1 cut(s) 1047
FblI GTMKAC 2 cut(s) 235, 2556
Fnu4HI GCNGC 5 cut(s) 652, 1271, 2061, 2158, 2508
Fsp4HI GCNGC 5 cut(s) 652, 1271, 2061, 2158, 2508
GlaI GCGC 1 cut(s) 2879
GluI GCNGC 5 cut(s) 652, 1271, 2061, 2158, 2508
GsaI CCCAGC 1 cut(s) 171
GsuI CTGGAG 2 cut(s) 284, 326
HaeIII GGCC 3 cut(s) 872, 1488, 2078
HapII CCGG 2 cut(s) 867, 2053
HgaI GACGC 2 cut(s) 211, 1427
HhaI GCGC 1 cut(s) 2880
Hin1I GRCGYC 1 cut(s) 222
Hin6I GCGC 1 cut(s) 2878
HinP1I GCGC 1 cut(s) 2878
HincII GTYRAC 2 cut(s) 236, 1207
HindII GTYRAC 2 cut(s) 236, 1207
HindIII AAGCTT 3 cut(s) 319, 539, 1742
HinfI GANTC 7 cut(s) 1591, 1701, 1751, 1998, 2687, 2782, 2819
HpaII CCGG 2 cut(s) 867, 2053
HphI GGTGA 5 cut(s) 217, 265, 1034, 1169, 2402
Hpy166II GTNNAC 7 cut(s) 236, 1207, 1812, 1990, 2182, 2557, 2589
Hpy8I GTNNAC 7 cut(s) 236, 1207, 1812, 1990, 2182, 2557, 2589
Hpy99I CGWCG 2 cut(s) 240, 773
HpyCH4III ACNGT 2 cut(s) 1353, 2455
HpyCH4IV ACGT 2 cut(s) 771, 1103
HpyF10VI GCNNNNNNNGC 9 cut(s) 133, 137, 146, 228, 397, 406, 1279, 1694, 2044
HpyF3I CTNAG 6 cut(s) 317, 524, 643, 1039, 2064, 2437
HpySE526I ACGT 2 cut(s) 771, 1103
Hsp92I GRCGYC 1 cut(s) 222
HspAI GCGC 1 cut(s) 2878
Ksp22I TGATCA 1 cut(s) 1047
Kzo9I GATC 9 cut(s) 163, 290, 582, 1047, 1791, 2124, 2346, 2359, 2492
LmnI GCTCC 6 cut(s) 83, 265, 1637, 2057, 2202, 2480
Lsp1109I GCAGC 4 cut(s) 663, 1282, 2072, 2494
LweI GCATC 7 cut(s) 418, 663, 1188, 1260, 1404, 2230, 2864
MaeII ACGT 2 cut(s) 771, 1103
MaeIII GTNAC 8 cut(s) 175, 223, 253, 1022, 2245, 2390, 2621, 2719
MalI GATC 9 cut(s) 165, 292, 584, 1049, 1793, 2126, 2348, 2361, 2494
MboI GATC 9 cut(s) 163, 290, 582, 1047, 1791, 2124, 2346, 2359, 2492
MfeI CAATTG 1 cut(s) 1310
MflI RGATCY 3 cut(s) 290, 582, 2124
MhlI GDGCHC 1 cut(s) 2761
MlyI GAGTC 3 cut(s) 1695, 1745, 2776
MroXI GAANNNNTTC 1 cut(s) 198
MslI CAYNNNNRTG 1 cut(s) 2643
MspCI CTTAAG 1 cut(s) 325
MspI CCGG 2 cut(s) 867, 2053
MspR9I CCNGG 2 cut(s) 868, 2054
MunI CAATTG 1 cut(s) 1310
Mva1269I GAATGC 3 cut(s) 1323, 1672, 2568
MwoI GCNNNNNNNGC 9 cut(s) 133, 137, 146, 228, 397, 406, 1279, 1694, 2044
NciI CCSGG 2 cut(s) 868, 2054
NcoI CCATGG 1 cut(s) 81
NdeI CATATG 2 cut(s) 1224, 1915
NdeII GATC 9 cut(s) 163, 290, 582, 1047, 1791, 2124, 2346, 2359, 2492
NheI GCTAGC 1 cut(s) 136
NlaIV GGNNCC 7 cut(s) 292, 436, 602, 871, 948, 1540, 2710
NmuCI GTSAC 7 cut(s) 175, 223, 253, 1022, 2390, 2621, 2719
NspI RCATGY 5 cut(s) 2047, 2139, 2408, 2617, 2811
PaqCI CACCTGC 1 cut(s) 236
PciI ACATGT 2 cut(s) 2404, 2613
PctI GAATGC 3 cut(s) 1323, 1672, 2568
PdmI GAANNNNTTC 1 cut(s) 198
PfeI GAWTC 4 cut(s) 1591, 1998, 2687, 2819
PflMI CCANNNNNTGG 2 cut(s) 2231, 2519
PkrI GCNGC 5 cut(s) 653, 1272, 2062, 2159, 2509
Ple19I CGATCG 1 cut(s) 2349
PleI GAGTC 3 cut(s) 1695, 1745, 2776
PpsI GAGTC 3 cut(s) 1695, 1745, 2776
PscI ACATGT 2 cut(s) 2404, 2613
PspEI GGTNACC 1 cut(s) 2390
PspFI CCCAGC 1 cut(s) 167
PspN4I GGNNCC 7 cut(s) 292, 436, 602, 871, 948, 1540, 2710
PspPI GGNCC 1 cut(s) 870
PsrI GAACNNNNNNTAC 2 cut(s) 1589, 1621
PstI CTGCAG 2 cut(s) 233, 402
PstNI CAGNNNCTG 1 cut(s) 1688
PsuI RGATCY 3 cut(s) 290, 582, 2124
PvuI CGATCG 1 cut(s) 2349
RsaI GTAC 4 cut(s) 1085, 1607, 1644, 1991
RsaNI GTAC 4 cut(s) 1084, 1606, 1643, 1990
RseI CAYNNNNRTG 1 cut(s) 2643
SalI GTCGAC 1 cut(s) 234
SatI GCNGC 5 cut(s) 652, 1271, 2061, 2158, 2508
Sau3AI GATC 9 cut(s) 163, 290, 582, 1047, 1791, 2124, 2346, 2359, 2492
Sau96I GGNCC 1 cut(s) 870
SchI GAGTC 3 cut(s) 1695, 1745, 2776
ScrFI CCNGG 2 cut(s) 868, 2054
SduI GDGCHC 1 cut(s) 2761
SfaNI GCATC 7 cut(s) 418, 663, 1188, 1260, 1404, 2230, 2864
SfcI CTRYAG 3 cut(s) 229, 398, 2557
SmiMI CAYNNNNRTG 1 cut(s) 2643
SmlI CTYRAG 5 cut(s) 325, 811, 1027, 1586, 2363
SmoI CTYRAG 5 cut(s) 325, 811, 1027, 1586, 2363
SpeI ACTAGT 1 cut(s) 2668
SsiI CCGC 6 cut(s) 1011, 1288, 1472, 1653, 1707, 2157
SspI AATATT 1 cut(s) 1573
StyD4I CCNGG 2 cut(s) 866, 2052
StyI CCWWGG 2 cut(s) 81, 1408
TaaI ACNGT 2 cut(s) 1353, 2455
TaiI ACGT 2 cut(s) 774, 1106
TaqI TCGA 8 cut(s) 235, 544, 768, 940, 976, 990, 1726, 2110
TaqII GACCGA 1 cut(s) 163
TatI WGTACW 2 cut(s) 1083, 1989
TauI GCSGC 1 cut(s) 2160
TfiI GAWTC 4 cut(s) 1591, 1998, 2687, 2819
TscAI CASTG 7 cut(s) 923, 1427, 1540, 2314, 2611, 2728, 2851
TseFI GTSAC 7 cut(s) 175, 223, 253, 1022, 2390, 2621, 2719
TseI GCWGC 4 cut(s) 651, 1270, 2060, 2507
Tsp45I GTSAC 7 cut(s) 175, 223, 253, 1022, 2390, 2621, 2719
TspGWI ACGGA 3 cut(s) 134, 470, 1565
TspRI CASTG 7 cut(s) 923, 1427, 1540, 2314, 2611, 2728, 2851
Van91I CCANNNNNTGG 2 cut(s) 2231, 2519
Vha464I CTTAAG 1 cut(s) 325
XapI RAATTY 6 cut(s) 52, 510, 786, 952, 1342, 2113
XbaI TCTAGA 1 cut(s) 1384
XceI RCATGY 5 cut(s) 2047, 2139, 2408, 2617, 2811
XmaJI CCTAGG 1 cut(s) 1408
XmiI GTMKAC 2 cut(s) 235, 2556
XmnI GAANNNNTTC 1 cut(s) 198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.