Rw1G034110
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
62055732 .. 62066833
11102 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G034110.1

Sequence Viewer

Length: 5091 bp
ATGAATTGCCCCTATTTTCTATCCTATAAGTTAATTTGTCAGGCCTCAAATGGAACTTACAAATTTTCGCGACCCCATTACCAATTCAAAATGACCGCATCATACTTTCTTTCCAATGTAGTAGCACTAGCATTTGCTTTTGTTTGTTGCTGCAGCTCCATGGCCTCAACCATGGACAGCAATATGTTGGGGCTCGGAGGAGGAAACCAGACAGATAGGTTAGCGTTGCTTGCCATCAAAGCTCAAATACACCAAGATCCCAACCGGCCGGTCATGAGCTCGTGGAATGAGTCCACTCATTTTTGCATGTGGCATGGTGTCACCTGCAGCCGACGCCATCTTCAGAGGGTCATTAAGCTGAACCTAACCTCCCTGAAGTTGTCCGGGTCCATATATCCTCACGTAGGAAACCTGAGCTTCCTAAGGGAGCTAAGCCTCTATAATAATAGCCTCACCAACAAAATTCCTCCAGAAATTGGGCACTTGCTGAGGTTGCGGATATTACGTCTAGAAAATAACTCACTCAGTGGTCCTATTCCTGCCAATATCTCCAATTGCTTCAACCTCATTATTCTCGATGTTTCTCACAACATGCTGGGAGGTAACATTCCTCCAGAACTTGGCTCCTTGTCTAAGCTTGAGTATCTTAGTTTTCTATTTAATAATCTAACAGGAGAGATACCTCCCTCCTTGGGTAACCTTTCTAGTCTTGGCTCACTTGATGCTTATAGTAATAACTTGGTGGGAAGTATTCCTAGTTCTCTAGGCCAACTGAAAAAATTAACACATTTCTCATTGGAATCAAATAAGTTGTCTGGTACCATCCCTCCCTCCATCTATAACATCTCTAGTCTCGTTGGATTTATCATAGGAATAAACCAAATTCAAGGGAGCATGCCCCCAACCTTGTTCAGAACCCTTTTGAATCTCAAATATTTTTGCGTTTCCGATAATCAGTTTACTGGATCACTTCCTCTGTCAATAAGCAATGCCACTAATTTAGTGGTTTTTTATGTTGAGGATAACAAACTAACAGGGCAAGTGCCAAATTTACAAAAGCTTTGTACCCTTGTGACATTCCATATTGCTGGTAATCATCTCGGAAGTGGCAGTGATGGGGACTTGAGTTTTTTCTCAGACTTGACCAATGCTACACAGTTGGTGTGGTTAATTATAGCATCCAACAATTTCGGAGGGACGCTGCCCACATCAATATCCAATCTCTCAACCCTTACAATTCTAGAAGTTGAAAGCAACCAATTACATGGAAGCATCCCTGCAGGGATAGGGAATCTGGTCAACATGAAATCATTGGCTTTGTCTGGTAACATGTTCACAAGTAACATTCCCACTGACATCGGGAAACTTTCAGGTCTTGGGGGATTGCATTTTCAAAACAACGGATTATCAGGGAGCCTACCATTTTCTCTAGGAAATCTGACATCGTTAGTTTATCTCGAAATGCAAGGAAATAATTTTAATGGTACCATCCCTACAAGCCTTGGGGAATGCCATTCATTGCTAGTGTTTGATCTTTCACGCAATAATCTTAGTGGCCACATACCTCCACAAGTTATTGGTGTTCCTTCTTTATCAATATCTTTGAACTTGTCTGAAAATCGTCTCAGTGGTTCCCTTCCCTTGGAGCTAGGAAAGTTAAAAAGTCTAGGTGAGCTGGATCTCTCTAATAATATGATATCAGGAAAACTTCCTAGTAGCCTTGGCAGTTGCCTGAGTTTAGAAATCCTGCACTTGCAAGGAAACTTCTTTGATGGCTCCATTCCTTCGGCTATGGTTTCCTTGAGAGGGATTCGAGATTTAGACCTTTCGCGCAACAATCTCTCCGGTGAAATTCCTGAATTTTTGGCAGGGTTTAGAGACTTGGAGAAACTTAACCTGTCGTTCAATGACTTTTGGGGTGCAGTACCAATTAAAGGTGTATTTAACAATGCAAGTGCTACTTCAGTTTTAATTTGTCAGGCCTCAAATGGAACTCACAAATCTTCACAACCCCATAACCAATTCAAAATGACCTCATCATACTTTTTTTCCAATGTACTAGCACTAATACTAGTACTAGCAATTGTTTTTTTTTGTTGCTGCAGGTCCATGGCCTCAACCATGGACAGCAATAGGTTAGCACTCAGAGGAGGCAACGAGACAGATAGGCTGGCATTGCTTGCCATTAAAGCTCAAATACACCAAAATCCCAACCGGCCGGTCATGAGCTCGTGGAATAAGTCCACTCATTTTTGCAACTGGCATGGTGTCACCTGCAGCCGACGCCATCTTCAGAGGGTCATTAAGCTGAACTTAACCTCCCTGAAGTTATCCGGGTCCATATCTCCTCACATAGGAAACCTGAGCTTCCTAAGGGATCTAAGCTTCTATGATAATAGCTTCACCAAAAAAATCCCTCCAGAAATTGGGCACTTGCGGAGGTTGCGGATATTACGTCTAGAAAACAACTCACTCAGTGGTCCTATTCCTGCCAATATCTCCAATTGCTTCAAACTCATTATTATCGATGTTTCTTACAACAAGCTGGGAGGTAACATTCCTCCAGAACTTGGCTCCTTGTCTAAGCTTGAGTATCTTAGTTTGCTATTTAATAATCTAACAGGAGGGATACCTCCCTCCTTGGGTAACCTTTCTAGTCTTGGCTCACTTGATGCTTATAGTAATAACTTGGTGGGAAGTATTCCTAGTTCTCTAGGCCAACTGAAAAAATTAACATATTTCTCATTGGAATCAAACCAGTTGTCTGGTACCATCCCTCCCTCCATCTATAACATCTCAAGTCTCATTGGATTTATCATAGGAATAAACCAAATTCAAGGGAGCATGCCCCCAACCTTGTTCAGAACCCTTTTGAATCTCAAATATTTTTGCATTTCCGATAATCAGTTGAGTGGATCACTTCCTCTGTCAATAAGCAATGCCACTAATTTAGTGGATTTTTATGTTGAGAATAACCAAATAACAGGGCAAGTGCCAAACTTACAAAAGCTTCGTACCCTTGTGACATTCTATATTGCTGGTAATCATCTCGGAAGTGGCAGTGATGGGGACTTGAGTTTTTTCTCAGACTTGACCAATGCTACACAGTTGGTGTGGTTGGCTGCAGATACCAACAACTTCGGAGGGACGTTGCCCGCATCAGTATCCAATCTCTCAACCAACCTTGCAGGTCTCGATGTTCACAAAAACCAATTACATGGAAGCATCCCTGCAGGGATAGTGAATCTGGTCAACATGGAATTATTGGTTTTGTCTGATAACATGTTCACAGGTAACATTCCCACTGACATCGGGAAACTTTCAAGTCTTGGGAAATTGGGTTTTCATAATAACAGATTATCAGGAAGCCTCCCATCCTCTCTAGAAAATCTGACATCATTAGTTTATCTCGAATTGCAAGGAAATAATTTTAATGGTACCATCCCTACAAGCCTTGGGGAATGCCATTCATTGCTAGTGCTTGATCTTTCACGCAATAATCTTAGTGGGGACATACCTCCACAAGTTATTGGTGTTCCTTCTTTATCAATATCTTTGAACTTGTCTGAAAATCGTCTCAGTGGTTCCCTTCCCTTGGAGGTAGGAAAGTTAAAAAGTCTAGGTGAGTTGGATCTCTCTAATAATATGATATCAGGAAAACTTCCTAGTAGCCTTGGTAGTTGCCTGAGTTTAGAAATCCTGCTCTTGCAAGGAAACTTCTTTGACGGCTCCATTCCTTCGGCTATGGTTTCCTTGAGAGGGATTCGAGATTTAGACCTTTCGCGCAATAATCTCTCAGGTGAAATTCCTGAATTTCTGGCGGGGTTTGGAAGCTTGAAGCAACTTAACCTGTCTTTCAATGACTTTAGGGGTGCAGTACCAGTTAAAGGTGTCTTTAACAATGCAAGTGCCACTTCAGTTGTCGGAAACACTAGGCTCTGCGGAGGTATTTCTGAATTTCAGCTTCCAAAGTGCAAGTCTAAAGAATCGAGGTCTCGTAGCATGAAACTAACAATCTCATTAGTATCCGCATTCACACTTCTTGGAATTGCTACGCTGCTGACATTTATGTTTCTTTGTTTCTCCAAAAAGAAAAGCAAAGCAACTTCATCAAGCACATTTTCGAACTCTATTTTGCAAGTGTCATATAATAGTCTCTCCAAAGCTACTGATGGTTTCTCTGCAACAAATTTGATTGGTGCGGGTAGTTTTGGGTTTGTCTACAAAGGAGTTCTCAACGAAGATGGAGCTCAGCTTGTTGCTGTGAAGGTGTTTAACATGTTACGCCGGGGAGCTTCCAAGAGTTTCCTAGCCGAATGTGAGGCACTCCGAAATATCAGACATCGAAATCTAGTCCCAATTATAACTGCATGTTTGAGTTTTGACTCTCATGGTAATGATTTCAAGGCTTTGGTTTATAAGTTCATGGAGAATGGGAGCTTAGAGGAGTGGCTACATCCAACTACTGGGACAGAGGACGCACTGAAGAATTTAAGTCTTGTTCAGAGGCTAAACATTGCCATTGATGTTGCTTGTGCACTGGATTATCTTCATAATCATAGCAAAACACCAATAGTTCATTGTGATCTCAAGCCGAGCAATGTTCTTTTGGACAATGACTTGACTGGACATGTTGCTGACTTTGGATTAGCTAGATTCCTCTCAAGAATAGCCGATAACGTCTCAACAAATCAATCAAGTTCCATTGCAATAAGAGGGACTATTGGTTATGCTGCTCCAGAGTATGGAATGGGAAGTGAGGTGTCAACATATGGAGATGTCTACAGCTTCGGCATTCTCTTGTTAGAGATGTTTACAGGGAAGAGACCCACTGACCACATGTTTGTGGACGGTTTGAACCTTCACAAGTTTGTGAAGATGGCCTTCTGCGAGCGAGTTTTAGAGATTGCAGATTCATCACTTGTTCAAGTAGGCAATCCCAGCCAGAGCACCAATGATGCTCTTGAGGAATGCTTGAGTTCAATACTGGGAATTGGAGTTGCTTGCTCTGTGGAATCTCCAACAGACCGAGAGAATATCGGTGATGTTGTATCTGAACTGAAAAGCATTCGAGCCACTCTTGTTGGATAG

Protein Analysis

1696

Amino Acids

183.13

Weight (kDa)

8.06

Isoelectric Point (pI)

34.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 70 - 110 7.8e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 110 - 219 2.3e-08 Leucine-rich repeat region
LRR_14 PF23598 403 - 511 1e-08 Leucine-rich repeat region
LRR_14 PF23598 500 - 636 4.2e-06 Leucine-rich repeat region
LRR_8 PF13855 579 - 638 5.8e-07 Leucine rich repeat
LRRNT_2 PF08263 720 - 760 7.2e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 763 - 869 1.3e-08 Leucine-rich repeat region
LRR_14 PF23598 1076 - 1165 7.9e-06 Leucine-rich repeat region
LRR_14 PF23598 1150 - 1283 6.5e-07 Leucine-rich repeat region
LRR_8 PF13855 1230 - 1289 5.7e-06 Leucine rich repeat
Pkinase PF00069 1395 - 1659 1e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1396 - 1614 2.5e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 4364, 4419
AarI CACCTGC 2 cut(s) 332, 2282
Acc36I ACCTGC 4 cut(s) 332, 2094, 2282, 3179
Acc65I GGTACC 4 cut(s) 818, 1484, 2768, 3437
AccB1I GGYRCC 4 cut(s) 818, 1484, 2768, 3437
AccB7I CCANNNNNTGG 6 cut(s) 476, 620, 2426, 2570, 4466, 4745
AccI GTMKAC 2 cut(s) 4221, 4782
AccII CGCG 3 cut(s) 70, 1831, 3784
AciI CCGC 9 cut(s) 96, 496, 2437, 2446, 3156, 3821, 3942, 4029, 4202
AclWI GGATC 6 cut(s) 251, 973, 1686, 2385, 2923, 3639
AcoI YGGCCR 3 cut(s) 266, 1555, 2216
AcuI CTGAAG 7 cut(s) 326, 395, 1947, 2276, 2345, 3900, 4505
AcyI GRCGYC 2 cut(s) 334, 2284
AdeI CACNNNGTG 2 cut(s) 527, 2477
AflIII ACRYGT 5 cut(s) 1329, 3282, 4278, 4630, 4839
AhlI ACTAGT 1 cut(s) 2071
AloI GAACNNNNNNTCC 4 cut(s) 353, 385, 2303, 2335
Alw21I GWGCWC 5 cut(s) 281, 2231, 4252, 4540, 4952
Alw44I GTGCAC 1 cut(s) 4536
AlwI GGATC 6 cut(s) 251, 973, 1686, 2385, 2923, 3639
ApaLI GTGCAC 1 cut(s) 4536
ApeKI GCWGC 9 cut(s) 150, 153, 327, 1201, 2100, 2277, 3122, 4057, 4733
ArsI GACNNNNNNTTYG 8 cut(s) 797, 829, 2747, 2779, 3962, 3994, 4826, 4858
Asp718I GGTACC 4 cut(s) 818, 1484, 2768, 3437
AspLEI GCGC 2 cut(s) 1833, 3786
AspS9I GGNCC 5 cut(s) 387, 530, 2106, 2337, 2480
AsuC2I CCSGG 3 cut(s) 385, 2335, 4289
AsuHPI GGTGA 9 cut(s) 313, 445, 1682, 1859, 2263, 2395, 3635, 3812, 5054
AsuII TTCGAA 1 cut(s) 4124
AvaII GGWCC 5 cut(s) 387, 530, 2106, 2337, 2480
AxyI CCTNAGG 2 cut(s) 422, 2372
BaeGI GKGCMC 3 cut(s) 483, 2433, 4540
BalI TGGCCA 1 cut(s) 1557
BanI GGYRCC 4 cut(s) 818, 1484, 2768, 3437
BanII GRGCYC 4 cut(s) 195, 281, 2231, 4252
BauI CACGAG 2 cut(s) 280, 2230
Bbv12I GWGCWC 5 cut(s) 281, 2231, 4252, 4540, 4952
BbvCI CCTCAGC 1 cut(s) 488
BbvI GCAGC 9 cut(s) 137, 165, 339, 1188, 2087, 2289, 3109, 4044, 4720
BceAI ACGGC 1 cut(s) 3742
BciVI GTATCC 3 cut(s) 2622, 3175, 4036
BcnI CCSGG 3 cut(s) 385, 2335, 4289
BcuI ACTAGT 1 cut(s) 2071
BfmI CTRYAG 8 cut(s) 151, 325, 1278, 2101, 2275, 3123, 3231, 4783
BfuAI ACCTGC 4 cut(s) 332, 2094, 2282, 3179
BfuI GTATCC 3 cut(s) 2622, 3175, 4036
BisI GCNGC 9 cut(s) 151, 154, 328, 1202, 2101, 2278, 3123, 4058, 4734
BlpI GCTNAGC 2 cut(s) 431, 4251
BlsI GCNGC 9 cut(s) 152, 155, 329, 1203, 2102, 2279, 3124, 4059, 4735
BmcAI AGTACT 1 cut(s) 2076
Bme1390I CCNGG 3 cut(s) 385, 2335, 4289
Bme18I GGWCC 5 cut(s) 387, 530, 2106, 2337, 2480
BmgT120I GGNCC 5 cut(s) 387, 530, 2106, 2337, 2480
BmrFI CCNGG 3 cut(s) 385, 2335, 4289
BmrI ACTGGG 2 cut(s) 4476, 4997
BmsI GCATC 8 cut(s) 107, 712, 1187, 1281, 2662, 3167, 3234, 4948
BmuI ACTGGG 2 cut(s) 4476, 4997
BpmI CTGGAG 5 cut(s) 453, 597, 2403, 2547, 4722
Bpu10I CCTNAGC 3 cut(s) 413, 488, 2363
Bpu1102I GCTNAGC 2 cut(s) 431, 4251
Bpu14I TTCGAA 1 cut(s) 4124
BpuMI CCSGG 3 cut(s) 385, 2335, 4289
Bsa29I ATCGAT 1 cut(s) 2526
BsaAI YACGTR 1 cut(s) 403
BsaHI GRCGYC 2 cut(s) 334, 2284
BsaI GGTCTC 3 cut(s) 3197, 3999, 4819
BsaWI WCCGGW 1 cut(s) 1844
Bse118I RCCGGY 4 cut(s) 264, 268, 2214, 2218
Bse1I ACTGG 8 cut(s) 967, 2264, 2758, 3881, 4471, 4545, 4630, 4992
Bse21I CCTNAGG 2 cut(s) 422, 2372
Bse3DI GCAATG 8 cut(s) 994, 1517, 2174, 2944, 3470, 4515, 4606, 4704
BseCI ATCGAT 1 cut(s) 2526
BseGI GGATG 9 cut(s) 822, 1178, 1272, 1488, 2772, 3225, 3374, 3441, 4456
BseMI GCAATG 8 cut(s) 994, 1517, 2174, 2944, 3470, 4515, 4606, 4704
BseNI ACTGG 8 cut(s) 967, 2264, 2758, 3881, 4471, 4545, 4630, 4992
BseRI GAGGAG 4 cut(s) 213, 2163, 2337, 4460
BseSI GKGCMC 3 cut(s) 483, 2433, 4540
BseX3I CGGCCG 2 cut(s) 266, 2216
BseXI GCAGC 9 cut(s) 137, 165, 339, 1188, 2087, 2289, 3109, 4044, 4720
BseYI CCCAGC 3 cut(s) 595, 2545, 4940
BsgI GTGCAG 3 cut(s) 1733, 1941, 3894
Bsh1236I CGCG 3 cut(s) 70, 1831, 3784
Bsh1285I CGRYCG 2 cut(s) 269, 2219
BshNI GGYRCC 4 cut(s) 818, 1484, 2768, 3437
BshVI ATCGAT 1 cut(s) 2526
BsiEI CGRYCG 2 cut(s) 269, 2219
BsiHKAI GWGCWC 5 cut(s) 281, 2231, 4252, 4540, 4952
BsiSI CCGG 8 cut(s) 265, 269, 384, 1845, 2215, 2219, 2334, 4288
BslFI GGGAC 8 cut(s) 1133, 1210, 3083, 3160, 3524, 4340, 4483, 4732
BsmBI CGTCTC 3 cut(s) 1628, 3581, 4687
BsmFI GGGAC 8 cut(s) 1133, 1210, 3083, 3160, 3524, 4340, 4483, 4732
BsmI GAATGC 6 cut(s) 1514, 3467, 4031, 4794, 4976, 5067
Bso31I GGTCTC 3 cut(s) 3197, 3999, 4819
Bsp119I TTCGAA 1 cut(s) 4124
Bsp1286I GDGCHC 8 cut(s) 195, 281, 483, 2231, 2433, 4252, 4540, 4952
Bsp143I GATC 9 cut(s) 256, 965, 1531, 1678, 2377, 2915, 3484, 3631, 4585
Bsp1720I GCTNAGC 2 cut(s) 431, 4251
Bsp19I CCATGG 4 cut(s) 159, 171, 2109, 2121
Bsp68I TCGCGA 1 cut(s) 70
BspACI CCGC 9 cut(s) 96, 496, 2437, 2446, 3156, 3821, 3942, 4029, 4202
BspDI ATCGAT 1 cut(s) 2526
BspFNI CGCG 3 cut(s) 70, 1831, 3784
BspHI TCATGA 2 cut(s) 273, 2223
BspMAI CTGCAG 7 cut(s) 155, 329, 1282, 2105, 2279, 3127, 3235
BspMI ACCTGC 4 cut(s) 332, 2094, 2282, 3179
BspPI GGATC 6 cut(s) 251, 973, 1686, 2385, 2923, 3639
BspT104I TTCGAA 1 cut(s) 4124
BspT107I GGYRCC 4 cut(s) 818, 1484, 2768, 3437
BspTNI GGTCTC 3 cut(s) 3197, 3999, 4819
BsrDI GCAATG 8 cut(s) 994, 1517, 2174, 2944, 3470, 4515, 4606, 4704
BsrFI RCCGGY 4 cut(s) 264, 268, 2214, 2218
BsrI ACTGG 8 cut(s) 967, 2264, 2758, 3881, 4471, 4545, 4630, 4992
BssAI RCCGGY 4 cut(s) 264, 268, 2214, 2218
BssMI GATC 9 cut(s) 256, 965, 1531, 1678, 2377, 2915, 3484, 3631, 4585
BssNI GRCGYC 2 cut(s) 334, 2284
BssSI CACGAG 2 cut(s) 280, 2230
Bst2BI CACGAG 2 cut(s) 280, 2230
Bst4CI ACNGT 3 cut(s) 1158, 3108, 4853
Bst6I CTCTTC 1 cut(s) 4817
BstACI GRCGYC 2 cut(s) 334, 2284
BstAPI GCANNNNNTGC 1 cut(s) 2180
BstBAI YACGTR 1 cut(s) 403
BstBI TTCGAA 1 cut(s) 4124
BstC8I GCNNGC 8 cut(s) 231, 896, 2172, 2181, 2846, 3156, 4892, 5005
BstDSI CCRYGG 4 cut(s) 159, 171, 2109, 2121
BstEII GGTNACC 2 cut(s) 695, 2645
BstENI CCTNNNNNAGG 2 cut(s) 402, 2352
BstF5I GGATG 9 cut(s) 822, 1178, 1272, 1488, 2772, 3225, 3374, 3441, 4456
BstFNI CGCG 3 cut(s) 70, 1831, 3784
BstHHI GCGC 2 cut(s) 1833, 3786
BstKTI GATC 9 cut(s) 259, 968, 1534, 1681, 2380, 2918, 3487, 3634, 4588
BstMBI GATC 9 cut(s) 256, 965, 1531, 1678, 2377, 2915, 3484, 3631, 4585
BstMCI CGRYCG 2 cut(s) 269, 2219
BstPI GGTNACC 2 cut(s) 695, 2645
BstSCI CCNGG 3 cut(s) 383, 2333, 4287
BstSFI CTRYAG 8 cut(s) 151, 325, 1278, 2101, 2275, 3123, 3231, 4783
BstSLI GKGCMC 3 cut(s) 483, 2433, 4540
BstUI CGCG 3 cut(s) 70, 1831, 3784
BstV1I GCAGC 9 cut(s) 137, 165, 339, 1188, 2087, 2289, 3109, 4044, 4720
BstX2I RGATCY 4 cut(s) 256, 1678, 2377, 3631
BstXI CCANNNNNNTGG 4 cut(s) 1088, 1265, 2765, 3218
BstYI RGATCY 4 cut(s) 256, 1678, 2377, 3631
BstZI CGGCCG 2 cut(s) 266, 2216
Bsu15I ATCGAT 1 cut(s) 2526
Bsu36I CCTNAGG 2 cut(s) 422, 2372
BsuI GTATCC 3 cut(s) 2622, 3175, 4036
BsuTUI ATCGAT 1 cut(s) 2526
BtgI CCRYGG 4 cut(s) 159, 171, 2109, 2121
BtsCI GGATG 9 cut(s) 822, 1178, 1272, 1488, 2772, 3225, 3374, 3441, 4456
BtsI GCAGTG 2 cut(s) 1117, 3067
BtuMI TCGCGA 1 cut(s) 70
BveI ACCTGC 4 cut(s) 332, 2094, 2282, 3179
Cac8I GCNNGC 8 cut(s) 231, 896, 2172, 2181, 2846, 3156, 4892, 5005
CciI TCATGA 2 cut(s) 273, 2223
CfoI GCGC 2 cut(s) 1833, 3786
Cfr10I RCCGGY 4 cut(s) 264, 268, 2214, 2218
Cfr13I GGNCC 5 cut(s) 387, 530, 2106, 2337, 2480
ClaI ATCGAT 1 cut(s) 2526
CseI GACGC 4 cut(s) 342, 1207, 2292, 4487
CspCI CAANNNNNGTGG 3 cut(s) 3901, 3936, 5065
DpnI GATC 9 cut(s) 258, 967, 1533, 1680, 2379, 2917, 3486, 3633, 4587
DpnII GATC 9 cut(s) 256, 965, 1531, 1678, 2377, 2915, 3484, 3631, 4585
DraIII CACNNNGTG 2 cut(s) 527, 2477
EaeI YGGCCR 3 cut(s) 266, 1555, 2216
EagI CGGCCG 2 cut(s) 266, 2216
Eam1104I CTCTTC 1 cut(s) 4817
EarI CTCTTC 1 cut(s) 4817
Ecl136II GAGCTC 3 cut(s) 279, 2229, 4250
EclXI CGGCCG 2 cut(s) 266, 2216
Eco147I AGGCCT 2 cut(s) 44, 1982
Eco24I GRGCYC 4 cut(s) 195, 281, 2231, 4252
Eco31I GGTCTC 3 cut(s) 3197, 3999, 4819
Eco32I GATATC 2 cut(s) 1698, 3651
Eco47I GGWCC 5 cut(s) 387, 530, 2106, 2337, 2480
Eco52I CGGCCG 2 cut(s) 266, 2216
Eco53kI GAGCTC 3 cut(s) 279, 2229, 4250
Eco57I CTGAAG 7 cut(s) 326, 395, 1947, 2276, 2345, 3900, 4505
Eco81I CCTNAGG 2 cut(s) 422, 2372
Eco91I GGTNACC 2 cut(s) 695, 2645
EcoICRI GAGCTC 3 cut(s) 279, 2229, 4250
EcoNI CCTNNNNNAGG 2 cut(s) 402, 2352
EcoO65I GGTNACC 2 cut(s) 695, 2645
EcoRV GATATC 2 cut(s) 1698, 3651
EcoT38I GRGCYC 4 cut(s) 195, 281, 2231, 4252
Esp3I CGTCTC 3 cut(s) 1628, 3581, 4687
FalI AAGNNNNNCTT 8 cut(s) 1945, 1977, 2297, 2329, 3898, 3930, 4868, 4900
FaqI GGGAC 8 cut(s) 1133, 1210, 3083, 3160, 3524, 4340, 4483, 4732
FauI CCCGC 3 cut(s) 3163, 3814, 4195
FauNDI CATATG 1 cut(s) 4771
FblI GTMKAC 2 cut(s) 4221, 4782
Fnu4HI GCNGC 9 cut(s) 151, 154, 328, 1202, 2101, 2278, 3123, 4058, 4734
FokI GGATG 9 cut(s) 809, 1165, 1259, 1475, 2759, 3212, 3361, 3428, 4443
FriOI GRGCYC 4 cut(s) 195, 281, 2231, 4252
Fsp4HI GCNGC 9 cut(s) 151, 154, 328, 1202, 2101, 2278, 3123, 4058, 4734
GlaI GCGC 2 cut(s) 1832, 3785
GluI GCNGC 9 cut(s) 151, 154, 328, 1202, 2101, 2278, 3123, 4058, 4734
GsaI CCCAGC 3 cut(s) 599, 2549, 4944
GsuI CTGGAG 5 cut(s) 453, 597, 2403, 2547, 4722
HapII CCGG 8 cut(s) 265, 269, 384, 1845, 2215, 2219, 2334, 4288
HgaI GACGC 4 cut(s) 342, 1207, 2292, 4487
HhaI GCGC 2 cut(s) 1833, 3786
Hin1I GRCGYC 2 cut(s) 334, 2284
Hin6I GCGC 2 cut(s) 1831, 3784
HinP1I GCGC 2 cut(s) 1831, 3784
HincII GTYRAC 3 cut(s) 1300, 3253, 4767
HindII GTYRAC 3 cut(s) 1300, 3253, 4767
HindIII AAGCTT 6 cut(s) 635, 1058, 2383, 2585, 3008, 3832
HpaII CCGG 8 cut(s) 265, 269, 384, 1845, 2215, 2219, 2334, 4288
HphI GGTGA 9 cut(s) 313, 445, 1682, 1859, 2263, 2395, 3635, 3812, 5054
Hpy99I CGWCG 2 cut(s) 336, 2286
HpyAV CCTTC 9 cut(s) 1596, 1646, 1794, 3549, 3599, 3747, 4261, 4871, 4894
HpyCH4III ACNGT 3 cut(s) 1158, 3108, 4853
HpyCH4IV ACGT 5 cut(s) 402, 505, 2455, 3149, 4680
HpySE526I ACGT 5 cut(s) 402, 505, 2455, 3149, 4680
Hsp92I GRCGYC 2 cut(s) 334, 2284
HspAI GCGC 2 cut(s) 1831, 3784
KpnI GGTACC 4 cut(s) 822, 1488, 2772, 3441
Kzo9I GATC 9 cut(s) 256, 965, 1531, 1678, 2377, 2915, 3484, 3631, 4585
Lsp1109I GCAGC 9 cut(s) 137, 165, 339, 1188, 2087, 2289, 3109, 4044, 4720
LweI GCATC 8 cut(s) 107, 712, 1187, 1281, 2662, 3167, 3234, 4948
MaeII ACGT 5 cut(s) 402, 505, 2455, 3149, 4680
MalI GATC 9 cut(s) 258, 967, 1533, 1680, 2379, 2917, 3486, 3633, 4587
MboI GATC 9 cut(s) 256, 965, 1531, 1678, 2377, 2915, 3484, 3631, 4585
MboII GAAGA 8 cut(s) 332, 1995, 2282, 4253, 4498, 4541, 4834, 4888
MfeI CAATTG 3 cut(s) 553, 2082, 2503
MflI RGATCY 4 cut(s) 256, 1678, 2377, 3631
MhlI GDGCHC 8 cut(s) 195, 281, 483, 2231, 2433, 4252, 4540, 4952
MlsI TGGCCA 1 cut(s) 1557
MluNI TGGCCA 1 cut(s) 1557
MlyI GAGTC 2 cut(s) 299, 4379
MmeI TCCRAC 7 cut(s) 838, 1206, 3609, 3904, 4484, 5045, 5065
Mox20I TGGCCA 1 cut(s) 1557
MscI TGGCCA 1 cut(s) 1557
MslI CAYNNNNRTG 2 cut(s) 4395, 4844
Msp20I TGGCCA 1 cut(s) 1557
MspI CCGG 8 cut(s) 265, 269, 384, 1845, 2215, 2219, 2334, 4288
MspR9I CCNGG 3 cut(s) 385, 2335, 4289
MunI CAATTG 3 cut(s) 553, 2082, 2503
Mva1269I GAATGC 6 cut(s) 1514, 3467, 4031, 4794, 4976, 5067
MvnI CGCG 3 cut(s) 70, 1831, 3784
NciI CCSGG 3 cut(s) 385, 2335, 4289
NcoI CCATGG 4 cut(s) 159, 171, 2109, 2121
NdeI CATATG 1 cut(s) 4771
NdeII GATC 9 cut(s) 256, 965, 1531, 1678, 2377, 2915, 3484, 3631, 4585
NmeAIII GCCGAG 1 cut(s) 4620
NmuCI GTSAC 4 cut(s) 319, 1072, 2269, 3022
NruI TCGCGA 1 cut(s) 70
NspV TTCGAA 1 cut(s) 4124
PaeI GCATGC 2 cut(s) 898, 2848
PagI TCATGA 2 cut(s) 273, 2223
PaqCI CACCTGC 2 cut(s) 332, 2282
PceI AGGCCT 2 cut(s) 44, 1982
PciI ACATGT 5 cut(s) 1329, 3282, 4278, 4630, 4839
PctI GAATGC 6 cut(s) 1514, 3467, 4031, 4794, 4976, 5067
PflMI CCANNNNNTGG 6 cut(s) 476, 620, 2426, 2570, 4466, 4745
PkrI GCNGC 9 cut(s) 152, 155, 329, 1203, 2102, 2279, 3124, 4059, 4735
PleI GAGTC 2 cut(s) 298, 4379
PpsI GAGTC 2 cut(s) 298, 4379
Ppu21I YACGTR 1 cut(s) 403
PscI ACATGT 5 cut(s) 1329, 3282, 4278, 4630, 4839
PsiI TTATAA 2 cut(s) 4364, 4419
Psp124BI GAGCTC 3 cut(s) 281, 2231, 4252
PspEI GGTNACC 2 cut(s) 695, 2645
PspFI CCCAGC 3 cut(s) 595, 2545, 4940
PspPI GGNCC 5 cut(s) 387, 530, 2106, 2337, 2480
PsrI GAACNNNNNNTAC 4 cut(s) 742, 774, 2692, 2724
PstI CTGCAG 7 cut(s) 155, 329, 1282, 2105, 2279, 3127, 3235
PsuI RGATCY 4 cut(s) 256, 1678, 2377, 3631
RruI TCGCGA 1 cut(s) 70
RseI CAYNNNNRTG 2 cut(s) 4395, 4844
SacI GAGCTC 3 cut(s) 281, 2231, 4252
SatI GCNGC 9 cut(s) 151, 154, 328, 1202, 2101, 2278, 3123, 4058, 4734
Sau3AI GATC 9 cut(s) 256, 965, 1531, 1678, 2377, 2915, 3484, 3631, 4585
Sau96I GGNCC 5 cut(s) 387, 530, 2106, 2337, 2480
SbfI CCTGCAGG 2 cut(s) 1282, 3235
ScaI AGTACT 1 cut(s) 2076
SchI GAGTC 2 cut(s) 299, 4379
ScrFI CCNGG 3 cut(s) 385, 2335, 4289
SdaI CCTGCAGG 2 cut(s) 1282, 3235
SduI GDGCHC 8 cut(s) 195, 281, 483, 2231, 2433, 4252, 4540, 4952
SfaNI GCATC 8 cut(s) 107, 712, 1187, 1281, 2662, 3167, 3234, 4948
SfcI CTRYAG 8 cut(s) 151, 325, 1278, 2101, 2275, 3123, 3231, 4783
SfuI TTCGAA 1 cut(s) 4124
SinI GGWCC 5 cut(s) 387, 530, 2106, 2337, 2480
SmiMI CAYNNNNRTG 2 cut(s) 4395, 4844
SpeI ACTAGT 1 cut(s) 2071
SphI GCATGC 2 cut(s) 898, 2848
Sse8387I CCTGCAGG 2 cut(s) 1282, 3235
SseBI AGGCCT 2 cut(s) 44, 1982
SsiI CCGC 9 cut(s) 96, 496, 2437, 2446, 3156, 3821, 3942, 4029, 4202
SspI AATATT 2 cut(s) 935, 2885
SstI GAGCTC 3 cut(s) 281, 2231, 4252
StuI AGGCCT 2 cut(s) 44, 1982
StyD4I CCNGG 3 cut(s) 383, 2333, 4287
TaaI ACNGT 3 cut(s) 1158, 3108, 4853
TaiI ACGT 5 cut(s) 405, 508, 2458, 3152, 4683
TaqII GACCGA 1 cut(s) 5043
TatI WGTACW 2 cut(s) 2056, 2074
TseFI GTSAC 4 cut(s) 319, 1072, 2269, 3022
TseI GCWGC 9 cut(s) 150, 153, 327, 1201, 2100, 2277, 3122, 4057, 4733
Tsp45I GTSAC 4 cut(s) 319, 1072, 2269, 3022
TspGWI ACGGA 1 cut(s) 1416
Van91I CCANNNNNTGG 6 cut(s) 476, 620, 2426, 2570, 4466, 4745
VneI GTGCAC 1 cut(s) 4536
VpaK11BI GGWCC 5 cut(s) 387, 530, 2106, 2337, 2480
XagI CCTNNNNNAGG 2 cut(s) 402, 2352
XbaI TCTAGA 4 cut(s) 508, 1240, 2458, 3382
XcmI CCANNNNNNNNNTGG 2 cut(s) 1000, 2950
XmiI GTMKAC 2 cut(s) 4221, 4782
ZrmI AGTACT 1 cut(s) 2076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.