MD01G1150600.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
25913571 .. 25916887
3317 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1150600.v1.1.491

Sequence Viewer

Length: 3069 bp
ATGGGGTTCTGGGGTATCATTATTAGCATCCGGTCTATTATCATGCAACTATTTCTCTTGATGGTCATTTCATCCTCCTTACGTCTTGGAGGGAATGAGACGGATAGACAGTCCTTGCTTGCATTTAAAGCTGAAATTGTGAACGATCCACTGGGCATTCTTAACTCCTGGAATGAATCCCTCCACTTCTGTCATTGGCAAGGCGTTGCTTGTGGCCACAGACACCAGAGACAGAGAGTCACCGTGCTGGACCTCCAATCAAGCCGGCTGAATGGTCAGCTACCCCCCCACATTGGAAACTTGAGCTTTCTTAGAAATTTAAACCTCCAAGACAACAGCTTCAACAACACCATCCCTCAAGAAATTGGTCGTTTGTTCAATCTGCAACAACTACTCCTTGATAACAACTCCTTCAGTGGTGATATTCCGTTCAACATATCACGTTGCTCTAACCTCCAAATACTTCGCATATCTGGAAACCATCTTAGGGGCAAACTTCCAATTGAAATTGGCTCCTTGTCCAACCTTCAGGTACTTACTTTAAGAAAAAACAATTTAAGTGGGGAAATCCCACCTTCTTTTGGAAATCTTTCTTCTCTCGACGAGTTAGATTTGGGAAGCAATAATCTGCGTGGAGGCATTCCGAATAGCCTTGGCCAATTGAAAAGTCTAACATATCTTGCATTGGGTCTAAATTATTATTTGAATGGTACCATTCCTCCCTCCATATACAACCTCTCATCAATTACAAGCATTTCTGTGGTTCGAAACGAACTGCATGGAACTCTTCCTCCTGGGTTGGGCCACACTATATTTCCAAACCTCCAACTATTTTATTTCTGGGGCAACCAATTCAGTGGACCGATACCAAATTCAATCTCCAATGCCTCAAGCCTTTCAAATTTTTTAATCCCATTTAATGAGTTTACTGGAAAAGTGCCTAGTCTGGCACGCCTGTCAAATTTGTATTGGTTAACACTTGCCCATAACAATCTTGGAAATGATGAGGAAAGTGACTTGGATTTCATTTCTTCTCTTGGTAATTGCACCAAATTGAGAAAGTTAGATTTTCTGGACAATAATTTTGGAGGAATGCTACCTGAATCCATCAGCAATCTCTCAACAGAGCTCAACCTACTGGTATTTGGTCGTAACCAGATACGTGGAAGAATTCCCATTGGGATCGGAAATCTAATCAACATGGAGGCTCTAGCCTCTGAGGGAAACCTATTGACAGGCACAATACCAAGTTCTATTGGGAAACTGAAAAGGTTGAATGAGCTGTATCTGAACGCGAATAAACTATCAGGTACCATCCCATCTTCTATTGGAAATCTAACTTCAATGACCAAGTTGATTCTCAGGTCAAACAAGTTAGAAGGCAACATACCGCAAAGTCTCGGAGAATGCAAGAATCTTCTACTTTTAGATCTTTCCCAAAATAATCTTCACGGTCAAATTCCTAAAGAAGTTATTGGTTTAACATCCTTGTCACAAGTTTTGGATCTATCCAGCAACAAGCTTACTGGATCCATACCAATGGAGGTAAGCAACTTGATGCATCTAGTTTACTTGGATGTTTCTGACAATAGGTTATCTGGTGAGATTCCACGAAGCTTAGGGAGTTGTACAAGTTTGGCATATCTGTATCTGAGTGGAAACTCATTGCAGGGGACCATTCCTGTATCCTTGAGCTCTTTGAGAGGGATTGAGGTTTTCGACCTCTCTCGCAACAACTTGTCTGGCAGTATTCCCAGCTATTTGGAGAGTTTCCGCTTTTTGGTGAATTTGAACCTCTCGTTTAATGATTTTGAAGGTGCATTACCAATGAAAGGAGTTTTCAAGAACCCAATTGCGCTTTCTGTCATGGGAAACTCACGGATTTGTGGAGTTATACCTTCTTTAAGATTGCCCAAATGCGTCTCCAAGCAATCTAAGCAAGGCTTATCGTCTAGGCTGGAAATAATTCTTTCAGTTGCTTGTGGGGTTATTGGGTTGATCTTACTGTTGTCCGTTGTGCTTCTTTGCCGATCAAGAAAAGTGAGAGCACTTAACTCAACTTCAGGATCGTATCAAATGGTTTCACTCTTGAAATTATCTTATAGAGATCTCCATAAAGCAACAGATGGGTTCTCGGCTGTGAATTTGATTGGTGGTGGAAGTTATGGGTCTGTATACAAGGCAACTCTCAATCAGCGTGAACAAAGAATTGTTGCAGTGAAAGTACTCAGTCAAAATTCAAGAGCTTCTAAAAGTTTCATAGCTGAATGTGAAGCCTTGAAAAGCATTAGGCACAGAAATCTTGTCAAGCTACTGACTGCTTGTTCAAGCATTGATTCTCAAGGAAACAATTTCAAGGCTCTGGTTTACGAGTTCATGGTGAACGGAAGCCTCGACGACTGGCTGCATAATTCAGCTCAACGGGTCGACAATCCAACCAACCTGCAGAAAAATCTGAATCTTATTCAGATAATCAACATTGCAATTGATGTAGCATGTGCTCTGGATTATTTGCACAACCGTTCTCACATGCCGATAGTTCATTGTGATTTAAAACCGAGCAATGTTCTCTTGGGTGGTGACATGACTGCATGTGTTGGTGATTTTGGTTTGGCAAGGTTCCTCCCGGACGTTTCTCGTCCATTTCCTGTGCACGAAAGCTCTTCCGATGCAATAAAAGGCTCCATAGGCTATACTGCCCCAGAGTATGGCATGGGAAGCGAGGTGTCAACATCTGGTGATGTGTATAGCTATGGAATCTTGTTACTAGAGATGCTAACAGGCAAGAGGCCAACGGATGACATGTTCAAAGACGGTTTGAATCTGCACAGCTTTGTTGTGAATGCAGTTCCTGAACACGTGGAAGAAATATGTGATCCGGTACTTCTTCAAAATGAAGAAAAAAATGGTGGGGATCGCAGGCAAAAAGTTGAGGAGTGCTTGATTTCACTTGCAAGAATAGGAGTTGCTTGTTCTGCGGCAATGCCGAGAGAGCGCAAGGACATGACCAATGTTGTATCTGAGTTGTGTCTTATAAGGGATGTGCTGATGGGAACCAGGATGCCTTAG

Protein Analysis

1023

Amino Acids

111.91

Weight (kDa)

8.39

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 1.8e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 79 - 159 4.1e-07 Leucine-rich repeat region
LRR_14 PF23598 146 - 228 1.7e-09 Leucine-rich repeat region
LRR_8 PF13855 150 - 210 2.4e-06 Leucine rich repeat
LRR_8 PF13855 174 - 230 4e-07 Leucine rich repeat
LRR_14 PF23598 389 - 479 3.9e-07 Leucine-rich repeat region
LRR_14 PF23598 466 - 590 8.5e-07 Leucine-rich repeat region
LRR_8 PF13855 499 - 556 1.2e-06 Leucine rich repeat
Pkinase PF00069 713 - 934 2.6e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 715 - 1009 2.9e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3035
Acc36I ACCTGC 1 cut(s) 2451
Acc65I GGTACC 2 cut(s) 710, 1310
AccB1I GGYRCC 2 cut(s) 710, 1310
AccB7I CCANNNNNTGG 1 cut(s) 2708
AccI GTMKAC 2 cut(s) 2175, 2427
AccII CGCG 1 cut(s) 1295
AciI CCGC 3 cut(s) 1391, 1774, 2978
AclWI GGATC 8 cut(s) 140, 1190, 1512, 1524, 1537, 2074, 2870, 2922
AcoI YGGCCR 2 cut(s) 214, 655
AcsI RAATTY 9 cut(s) 316, 871, 901, 961, 1170, 1458, 1786, 2143, 2236
AcuI CTGAAG 3 cut(s) 397, 512, 2046
AcvI CACGTG 1 cut(s) 2860
AfaI GTAC 6 cut(s) 534, 712, 1312, 1630, 2226, 2883
AfiI CCNNNNNNNGG 7 cut(s) 293, 487, 581, 800, 1780, 1832, 2708
AflIII ACRYGT 2 cut(s) 2802, 2857
AhdI GACNNNNNGTC 1 cut(s) 236
AjnI CCWGG 3 cut(s) 167, 793, 3056
AjuI GAANNNNNNNTTGG 4 cut(s) 1431, 1463, 1843, 1875
AloI GAACNNNNNNTCC 4 cut(s) 775, 807, 2789, 2821
Alw21I GWGCWC 5 cut(s) 1131, 1697, 2050, 2503, 2655
Alw26I GTCTC 4 cut(s) 92, 223, 1403, 1927
Alw44I GTGCAC 1 cut(s) 2651
AlwI GGATC 8 cut(s) 140, 1190, 1512, 1524, 1537, 2074, 2870, 2922
AlwNI CAGNNNCTG 1 cut(s) 2852
AoxI GGCC 4 cut(s) 214, 655, 802, 2789
ApaLI GTGCAC 1 cut(s) 2651
ApeKI GCWGC 1 cut(s) 2404
ApoI RAATTY 9 cut(s) 316, 871, 901, 961, 1170, 1458, 1786, 2143, 2236
ArsI GACNNNNNNTTYG 2 cut(s) 1067, 1099
Asp700I GAANNNNTTC 2 cut(s) 589, 1965
Asp718I GGTACC 2 cut(s) 710, 1310
AspLEI GCGC 2 cut(s) 1858, 2997
AspS9I GGNCC 4 cut(s) 250, 802, 860, 1674
AsuC2I CCSGG 1 cut(s) 2627
AsuHPI GGTGA 8 cut(s) 232, 431, 1613, 1795, 2392, 2591, 2612, 2750
AsuII TTCGAA 1 cut(s) 766
AvaII GGWCC 3 cut(s) 250, 860, 1674
BaeGI GKGCMC 1 cut(s) 2655
BalI TGGCCA 2 cut(s) 216, 657
BamHI GGATCC 1 cut(s) 1529
BanI GGYRCC 2 cut(s) 710, 1310
BanII GRGCYC 2 cut(s) 1131, 1697
BarI GAAGNNNNNNTAC 4 cut(s) 1371, 1403, 1806, 1838
BbrPI CACGTG 1 cut(s) 2860
Bbv12I GWGCWC 5 cut(s) 1131, 1697, 2050, 2503, 2655
BbvI GCAGC 1 cut(s) 2391
BccI CCATC 8 cut(s) 55, 359, 489, 1115, 1322, 1327, 2120, 3043
BciT130I CCWGG 3 cut(s) 169, 795, 3058
BciVI GTATCC 1 cut(s) 1696
BcnI CCSGG 1 cut(s) 2627
BcoDI GTCTC 4 cut(s) 92, 223, 1403, 1927
BfaI CTAG 5 cut(s) 942, 1211, 1565, 1953, 2768
BfmI CTRYAG 1 cut(s) 2444
BfuAI ACCTGC 1 cut(s) 2451
BfuI GTATCC 1 cut(s) 1696
BglII AGATCT 2 cut(s) 1429, 2107
BisI GCNGC 2 cut(s) 2405, 2979
BlsI GCNGC 2 cut(s) 2406, 2980
BmcAI AGTACT 1 cut(s) 2226
Bme1390I CCNGG 4 cut(s) 169, 795, 2627, 3058
Bme18I GGWCC 3 cut(s) 250, 860, 1674
BmeRI GACNNNNNGTC 1 cut(s) 236
BmgT120I GGNCC 4 cut(s) 250, 802, 860, 1674
BmiI GGNNCC 8 cut(s) 514, 712, 1312, 1531, 1675, 2621, 2683, 3055
BmrFI CCNGG 4 cut(s) 169, 795, 2627, 3058
BmrI ACTGGG 1 cut(s) 161
BmsI GCATC 6 cut(s) 36, 1548, 1570, 2659, 2763, 3051
BmuI ACTGGG 1 cut(s) 161
Bpu10I CCTNAGC 1 cut(s) 1618
Bpu14I TTCGAA 1 cut(s) 766
BpuEI CTTGAG 5 cut(s) 322, 342, 874, 1711, 2325
BpuMI CCSGG 1 cut(s) 2627
BsaAI YACGTR 2 cut(s) 1163, 2860
BsaJI CCNNGG 2 cut(s) 652, 794
BsaWI WCCGGW 2 cut(s) 30, 2878
BsaXI ACNNNNNCTCC 6 cut(s) 378, 408, 703, 733, 775, 805
Bsc4I CCNNNNNNNGG 7 cut(s) 293, 487, 581, 800, 1780, 1832, 2708
Bse118I RCCGGY 1 cut(s) 264
Bse1I ACTGG 5 cut(s) 156, 934, 1143, 1531, 2405
Bse3DI GCAATG 4 cut(s) 1664, 2478, 2569, 2988
BseBI CCWGG 3 cut(s) 169, 795, 3058
BseDI CCNNGG 2 cut(s) 652, 794
BseGI GGATG 9 cut(s) 27, 71, 351, 1314, 1484, 1582, 2803, 3046, 3066
BseLI CCNNNNNNNGG 7 cut(s) 293, 487, 581, 800, 1780, 1832, 2708
BseMI GCAATG 4 cut(s) 1664, 2478, 2569, 2988
BseMII CTCAG 5 cut(s) 1209, 1375, 1643, 2242, 3012
BseNI ACTGG 5 cut(s) 156, 934, 1143, 1531, 2405
BseRI GAGGAG 1 cut(s) 2948
BseSI GKGCMC 1 cut(s) 2655
BseXI GCAGC 1 cut(s) 2391
BseYI CCCAGC 1 cut(s) 1754
BsgI GTGCAG 1 cut(s) 2810
Bsh1236I CGCG 1 cut(s) 1295
BshFI GGCC 4 cut(s) 216, 657, 804, 2791
BshNI GGYRCC 2 cut(s) 710, 1310
BsiHKAI GWGCWC 5 cut(s) 1131, 1697, 2050, 2503, 2655
BsiSI CCGG 4 cut(s) 31, 265, 2627, 2879
BslFI GGGAC 1 cut(s) 1687
BslI CCNNNNNNNGG 7 cut(s) 293, 487, 581, 800, 1780, 1832, 2708
BsmAI GTCTC 4 cut(s) 92, 223, 1403, 1927
BsmBI CGTCTC 2 cut(s) 92, 1927
BsmFI GGGAC 1 cut(s) 1687
BsmI GAATGC 5 cut(s) 156, 639, 1098, 1412, 2848
BsnI GGCC 4 cut(s) 216, 657, 804, 2791
Bsp119I TTCGAA 1 cut(s) 766
Bsp1286I GDGCHC 5 cut(s) 1131, 1697, 2050, 2503, 2655
Bsp1407I TGTACA 1 cut(s) 1628
BspACI CCGC 3 cut(s) 1391, 1774, 2978
BspANI GGCC 4 cut(s) 216, 657, 804, 2791
BspCNI CTCAG 5 cut(s) 1210, 1374, 1644, 2241, 3013
BspFNI CGCG 1 cut(s) 1295
BspLI GGNNCC 8 cut(s) 514, 712, 1312, 1531, 1675, 2621, 2683, 3055
BspMAI CTGCAG 1 cut(s) 2448
BspMI ACCTGC 1 cut(s) 2451
BspPI GGATC 8 cut(s) 140, 1190, 1512, 1524, 1537, 2074, 2870, 2922
BspQI GCTCTTC 1 cut(s) 2668
BspT104I TTCGAA 1 cut(s) 766
BspT107I GGYRCC 2 cut(s) 710, 1310
BsrDI GCAATG 4 cut(s) 1664, 2478, 2569, 2988
BsrFI RCCGGY 1 cut(s) 264
BsrGI TGTACA 1 cut(s) 1628
BsrI ACTGG 5 cut(s) 156, 934, 1143, 1531, 2405
BssAI RCCGGY 1 cut(s) 264
BssECI CCNNGG 2 cut(s) 652, 794
BssNAI GTATAC 1 cut(s) 2176
BssT1I CCWWGG 1 cut(s) 652
Bst1107I GTATAC 1 cut(s) 2176
Bst2UI CCWGG 3 cut(s) 169, 795, 3058
Bst4CI ACNGT 6 cut(s) 111, 244, 1454, 2007, 2522, 2816
Bst6I CTCTTC 2 cut(s) 792, 2668
BstAUI TGTACA 1 cut(s) 1628
BstBAI YACGTR 2 cut(s) 1163, 2860
BstBI TTCGAA 1 cut(s) 766
BstC8I GCNNGC 4 cut(s) 120, 266, 952, 2921
BstF5I GGATG 9 cut(s) 27, 71, 351, 1314, 1484, 1582, 2803, 3046, 3066
BstFNI CGCG 1 cut(s) 1295
BstHHI GCGC 2 cut(s) 1858, 2997
BstMAI GTCTC 4 cut(s) 92, 223, 1403, 1927
BstMWI GCNNNNNNNGC 6 cut(s) 128, 1936, 2688, 2718, 2975, 2992
BstNI CCWGG 3 cut(s) 169, 795, 3058
BstNSI RCATGY 4 cut(s) 2499, 2533, 2595, 2806
BstSCI CCNGG 4 cut(s) 167, 793, 2625, 3056
BstSFI CTRYAG 1 cut(s) 2444
BstSLI GKGCMC 1 cut(s) 2655
BstUI CGCG 1 cut(s) 1295
BstV1I GCAGC 1 cut(s) 2391
BstX2I RGATCY 4 cut(s) 1429, 1504, 1529, 2107
BstXI CCANNNNNNTGG 4 cut(s) 857, 1163, 1540, 1762
BstYI RGATCY 4 cut(s) 1429, 1504, 1529, 2107
BstZ17I GTATAC 1 cut(s) 2176
BsuI GTATCC 1 cut(s) 1696
BsuRI GGCC 4 cut(s) 216, 657, 804, 2791
BtsCI GGATG 9 cut(s) 27, 71, 351, 1314, 1484, 1582, 2803, 3046, 3066
BtsI GCAGTG 1 cut(s) 2223
BtsIMutI CAGTG 4 cut(s) 149, 421, 862, 2223
BveI ACCTGC 1 cut(s) 2451
Cac8I GCNNGC 4 cut(s) 120, 266, 952, 2921
CaiI CAGNNNCTG 1 cut(s) 2852
CfoI GCGC 2 cut(s) 1858, 2997
Cfr10I RCCGGY 1 cut(s) 264
Cfr13I GGNCC 4 cut(s) 250, 802, 860, 1674
CseI GACGC 1 cut(s) 1909
Csp6I GTAC 6 cut(s) 533, 711, 1311, 1629, 2225, 2882
CspCI CAANNNNNGTGG 2 cut(s) 541, 576
CviQI GTAC 6 cut(s) 533, 711, 1311, 1629, 2225, 2882
DraI TTTAAA 3 cut(s) 127, 321, 2553
DriI GACNNNNNGTC 1 cut(s) 236
EaeI YGGCCR 2 cut(s) 214, 655
Eam1104I CTCTTC 2 cut(s) 792, 2668
Eam1105I GACNNNNNGTC 1 cut(s) 236
EarI CTCTTC 2 cut(s) 792, 2668
Ecl136II GAGCTC 2 cut(s) 1129, 1695
Eco130I CCWWGG 1 cut(s) 652
Eco24I GRGCYC 2 cut(s) 1131, 1697
Eco47I GGWCC 3 cut(s) 250, 860, 1674
Eco53kI GAGCTC 2 cut(s) 1129, 1695
Eco57I CTGAAG 3 cut(s) 397, 512, 2046
Eco72I CACGTG 1 cut(s) 2860
EcoICRI GAGCTC 2 cut(s) 1129, 1695
EcoRI GAATTC 1 cut(s) 1170
EcoRII CCWGG 3 cut(s) 167, 793, 3056
EcoT14I CCWWGG 1 cut(s) 652
EcoT22I ATGCAT 1 cut(s) 1563
EcoT38I GRGCYC 2 cut(s) 1131, 1697
ErhI CCWWGG 1 cut(s) 652
Esp3I CGTCTC 2 cut(s) 92, 1927
FalI AAGNNNNNCTT 2 cut(s) 1928, 1960
FaqI GGGAC 1 cut(s) 1687
FblI GTMKAC 2 cut(s) 2175, 2427
Fnu4HI GCNGC 2 cut(s) 2405, 2979
FokI GGATG 8 cut(s) 14, 58, 338, 1301, 1471, 1589, 2810, 3053
FriOI GRGCYC 2 cut(s) 1131, 1697
Fsp4HI GCNGC 2 cut(s) 2405, 2979
FspBI CTAG 5 cut(s) 942, 1211, 1565, 1953, 2768
GlaI GCGC 2 cut(s) 1857, 2996
GluI GCNGC 2 cut(s) 2405, 2979
GsaI CCCAGC 1 cut(s) 1758
HaeIII GGCC 4 cut(s) 216, 657, 804, 2791
HapII CCGG 4 cut(s) 31, 265, 2627, 2879
HgaI GACGC 1 cut(s) 1909
HhaI GCGC 2 cut(s) 1858, 2997
Hin6I GCGC 2 cut(s) 1856, 2995
HinP1I GCGC 2 cut(s) 1856, 2995
HincII GTYRAC 3 cut(s) 975, 2428, 2730
HindII GTYRAC 3 cut(s) 975, 2428, 2730
HindIII AAGCTT 2 cut(s) 1520, 1615
HpaI GTTAAC 1 cut(s) 975
HpaII CCGG 4 cut(s) 31, 265, 2627, 2879
HphI GGTGA 8 cut(s) 232, 431, 1613, 1795, 2392, 2591, 2612, 2750
Hpy99I CGWCG 2 cut(s) 605, 2399
HpyAV CCTTC 6 cut(s) 421, 536, 585, 1373, 1808, 1908
HpyCH4III ACNGT 6 cut(s) 111, 244, 1454, 2007, 2522, 2816
HpyCH4IV ACGT 5 cut(s) 82, 442, 1162, 2631, 2859
HpyF10VI GCNNNNNNNGC 6 cut(s) 128, 1936, 2688, 2718, 2975, 2992
HpySE526I ACGT 5 cut(s) 82, 442, 1162, 2631, 2859
HspAI GCGC 2 cut(s) 1856, 2995
KpnI GGTACC 2 cut(s) 714, 1314
KroI GCCGGC 1 cut(s) 264
KroNI GCCGGC 1 cut(s) 266
KspAI GTTAAC 1 cut(s) 975
LguI GCTCTTC 1 cut(s) 2668
LmnI GCTCC 2 cut(s) 518, 2687
Lsp1109I GCAGC 1 cut(s) 2391
LweI GCATC 6 cut(s) 36, 1548, 1570, 2659, 2763, 3051
MaeI CTAG 5 cut(s) 942, 1211, 1565, 1953, 2768
MaeII ACGT 5 cut(s) 82, 442, 1162, 2631, 2859
MaeIII GTNAC 6 cut(s) 238, 1013, 1151, 1491, 2579, 2763
MfeI CAATTG 4 cut(s) 501, 659, 1851, 2484
MflI RGATCY 4 cut(s) 1429, 1504, 1529, 2107
MhlI GDGCHC 5 cut(s) 1131, 1697, 2050, 2503, 2655
MlsI TGGCCA 2 cut(s) 216, 657
MluNI TGGCCA 2 cut(s) 216, 657
MlyI GAGTC 1 cut(s) 246
MmeI TCCRAC 3 cut(s) 546, 850, 2459
Mox20I TGGCCA 2 cut(s) 216, 657
Mph1103I ATGCAT 1 cut(s) 1563
MroNI GCCGGC 1 cut(s) 264
MroXI GAANNNNTTC 2 cut(s) 589, 1965
MscI TGGCCA 2 cut(s) 216, 657
MslI CAYNNNNRTG 2 cut(s) 758, 1538
Msp20I TGGCCA 2 cut(s) 216, 657
MspI CCGG 4 cut(s) 31, 265, 2627, 2879
MspR9I CCNGG 4 cut(s) 169, 795, 2627, 3058
MunI CAATTG 4 cut(s) 501, 659, 1851, 2484
Mva1269I GAATGC 5 cut(s) 156, 639, 1098, 1412, 2848
MvaI CCWGG 3 cut(s) 169, 795, 3058
MvnI CGCG 1 cut(s) 1295
MwoI GCNNNNNNNGC 6 cut(s) 128, 1936, 2688, 2718, 2975, 2992
NaeI GCCGGC 1 cut(s) 266
NciI CCSGG 1 cut(s) 2627
NgoMIV GCCGGC 1 cut(s) 264
NlaIV GGNNCC 8 cut(s) 514, 712, 1312, 1531, 1675, 2621, 2683, 3055
NmeAIII GCCGAG 2 cut(s) 2114, 3012
NmuCI GTSAC 4 cut(s) 238, 1013, 1491, 2579
NsiI ATGCAT 1 cut(s) 1563
NspI RCATGY 4 cut(s) 2499, 2533, 2595, 2806
NspV TTCGAA 1 cut(s) 766
PciI ACATGT 1 cut(s) 2802
PciSI GCTCTTC 1 cut(s) 2668
PcsI WCGNNNNNNNCGW 1 cut(s) 2391
PctI GAATGC 5 cut(s) 156, 639, 1098, 1412, 2848
PdiI GCCGGC 1 cut(s) 266
PdmI GAANNNNTTC 2 cut(s) 589, 1965
PfeI GAWTC 9 cut(s) 176, 1103, 1357, 1414, 1606, 2336, 2458, 2757, 2821
PflMI CCANNNNNTGG 1 cut(s) 2708
PfoI TCCNGGA 2 cut(s) 167, 2625
PkrI GCNGC 2 cut(s) 2406, 2980
PleI GAGTC 1 cut(s) 245
PmaCI CACGTG 1 cut(s) 2860
PmlI CACGTG 1 cut(s) 2860
PpsI GAGTC 1 cut(s) 245
Ppu21I YACGTR 2 cut(s) 1163, 2860
PscI ACATGT 1 cut(s) 2802
PsiI TTATAA 1 cut(s) 3035
Psp124BI GAGCTC 2 cut(s) 1131, 1697
Psp6I CCWGG 3 cut(s) 167, 793, 3056
PspCI CACGTG 1 cut(s) 2860
PspFI CCCAGC 1 cut(s) 1754
PspGI CCWGG 3 cut(s) 167, 793, 3056
PspN4I GGNNCC 8 cut(s) 514, 712, 1312, 1531, 1675, 2621, 2683, 3055
PspPI GGNCC 4 cut(s) 250, 802, 860, 1674
PstI CTGCAG 1 cut(s) 2448
PstNI CAGNNNCTG 1 cut(s) 2852
PsuI RGATCY 4 cut(s) 1429, 1504, 1529, 2107
RsaI GTAC 6 cut(s) 534, 712, 1312, 1630, 2226, 2883
RsaNI GTAC 6 cut(s) 533, 711, 1311, 1629, 2225, 2882
RseI CAYNNNNRTG 2 cut(s) 758, 1538
SacI GAGCTC 2 cut(s) 1131, 1697
SalI GTCGAC 1 cut(s) 2426
SapI GCTCTTC 1 cut(s) 2668
SatI GCNGC 2 cut(s) 2405, 2979
Sau96I GGNCC 4 cut(s) 250, 802, 860, 1674
ScaI AGTACT 1 cut(s) 2226
SchI GAGTC 1 cut(s) 246
ScrFI CCNGG 4 cut(s) 169, 795, 2627, 3058
SduI GDGCHC 5 cut(s) 1131, 1697, 2050, 2503, 2655
SfaNI GCATC 6 cut(s) 36, 1548, 1570, 2659, 2763, 3051
SfcI CTRYAG 1 cut(s) 2444
SfuI TTCGAA 1 cut(s) 766
SinI GGWCC 3 cut(s) 250, 860, 1674
SmiMI CAYNNNNRTG 2 cut(s) 758, 1538
SmlI CTYRAG 5 cut(s) 301, 357, 889, 1690, 2340
SmoI CTYRAG 5 cut(s) 301, 357, 889, 1690, 2340
SsiI CCGC 3 cut(s) 1391, 1774, 2978
SspMI CTAG 5 cut(s) 942, 1211, 1565, 1953, 2768
SstI GAGCTC 2 cut(s) 1131, 1697
StyD4I CCNGG 4 cut(s) 167, 793, 2625, 3056
StyI CCWWGG 1 cut(s) 652
TaaI ACNGT 6 cut(s) 111, 244, 1454, 2007, 2522, 2816
TaiI ACGT 5 cut(s) 85, 445, 1165, 2634, 2862
TaqI TCGA 5 cut(s) 600, 766, 1719, 2394, 2427
TaqII GACCGA 1 cut(s) 877
TatI WGTACW 2 cut(s) 1628, 2224
TauI GCSGC 1 cut(s) 2981
TfiI GAWTC 9 cut(s) 176, 1103, 1357, 1414, 1606, 2336, 2458, 2757, 2821
TscAI CASTG 4 cut(s) 156, 421, 862, 2223
TseFI GTSAC 4 cut(s) 238, 1013, 1491, 2579
TseI GCWGC 1 cut(s) 2404
Tsp45I GTSAC 4 cut(s) 238, 1013, 1491, 2579
TspDTI ATGAA 8 cut(s) 60, 189, 1015, 1844, 2248, 2365, 2531, 2910
TspGWI ACGGA 6 cut(s) 116, 417, 1894, 2002, 2400, 2810
TspRI CASTG 4 cut(s) 156, 421, 862, 2223
Van91I CCANNNNNTGG 1 cut(s) 2708
VneI GTGCAC 1 cut(s) 2651
VpaK11BI GGWCC 3 cut(s) 250, 860, 1674
XapI RAATTY 9 cut(s) 316, 871, 901, 961, 1170, 1458, 1786, 2143, 2236
XceI RCATGY 4 cut(s) 2499, 2533, 2595, 2806
XcmI CCANNNNNNNNNTGG 1 cut(s) 992
XmiI GTMKAC 2 cut(s) 2175, 2427
XmnI GAANNNNTTC 2 cut(s) 589, 1965
XspI CTAG 5 cut(s) 942, 1211, 1565, 1953, 2768
ZrmI AGTACT 1 cut(s) 2226
Zsp2I ATGCAT 1 cut(s) 1563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.