RchiOBHm_Chr1g0335031
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
27250427 .. 27252004
1578 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56371

Sequence Viewer

Length: 1476 bp
ATGTTATCAGCACAACTTCCTAGTAGCCTCGGTAGTTGTGAGAGTTTGGAAGTCCTACACTTACAAGGTAACTTTTTGGAAGGGCTCATTCCTTCATCTATGAAGGAATTGAGAGGGATTCGAGATTTAGACCTTTCACTCAATAATTTGTCAGGAGATATTCCACAGTTTTTCGAGCAAATTGGAAACCTGGAGAATCTAAACCTATCCTTTAATCAGTTTTGGGGAGCAGTACCAACAGACGGTGTTTTTAGGAATGCAAGTGCGACTTCAGTTGCTGGAAACACAAGACTCTGCGGCGGTATTGCTAATCTTCGACTTCCTGTATGCAAGCTTCAAGAATCTAAAGGAAGAGAATTGTCTCTTAGAATGAAACTAGTGATCTCATTAGTTTCCGGGCTCACATTGTTGGGACTGACTGTGGTGCTTGCTCTTTTCCTTCTTCGTAAGAAAGGGAAAGAAACTGAAGTAAGCACTGTTGAGAACTCCATCTTACAAGTTTCATATGCTACTCTTCTAAAAGCTACTGACGGGTTCACTTCAGCTAATTTGATTGGTGTGGGCGCTTTTGGGTCTGTTTACAAAGGAATTCTTGGGGATGATAGAGTTGTTGTCGCTGTGAAGGTGCTTAACATGTTACACCGGGGAGCATCTAAGAGTTTCATTGCCGAATGTGAGGCATTGAGAAATATCAGGCATCGGAATCTGGTCAAGATCTTAACTGCATGTTCAAGTATTGATTTCAGTGGTAATGATTTCAAGGCTCTTGTTTATGAGTTCATGGAGAACGGTAGCTTAGAGGATTGGTTGCATCCATCCCCTGGAAATGAAGAGCTGATAGAAGCCCCCAAAAGTTTAAGTCTTGTTCAGAGGCTCGACATTGCCATTCATATTGCTTGTGCACTGGATTATCTTCACAATCATTGTGAAACAGCGATAGTTCATTGTGATCTCAAGCCAAGTAATGTTCTTTTGGACAAAGATTTGACTGGACATGTTTCTGACTTTGGACTGGCAAGGTTTCTCTCGGAACCAACCAGTGTTTCTAGAAATCAATCAAGCTCCATTGGAATCAGAGGATCAATTGGTTATGCTGCTCCAGAGTATGGTATGGGAAGTGAAGTTTCAACATATGGGGATGTCTACAGCTTTGGCATTCTCTTGTTAGAAATGTTTACAGGGAAGAAACCCACTGATCACATGTTCAGTGATGGCTTCAGTCTTCATTATTATGTGAAGACAGCTTTCCCTAAACGTGTTGCAGACATTGCAGATTCACTATTTCTTCGAGGAGGCAATATCACTGTTGAAGAATCTCACAACCTCTCGAGCTTGAGAGCACAGAAAATTGAAGAGTGCTTGACTTTGATATTTGGAATTGGAATTGCCTGTTCGGTTGAATCTCCAACAACCAGAAAGGATATCAGTGATGTTGCATCTGAATTGCACTCAATTAGGGGCAATCTTCTTGACTAG

Protein Analysis

491

Amino Acids

53.36

Weight (kDa)

5.76

Isoelectric Point (pI)

38.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 15 - 74 1e-08 Leucine rich repeat
Pkinase PF00069 180 - 400 1.7e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 183 - 402 5.7e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 821, 1106
AccI GTMKAC 1 cut(s) 1143
AciI CCGC 2 cut(s) 297, 300
AclWI GGATC 1 cut(s) 1087
AcsI RAATTY 1 cut(s) 588
AcuI CTGAAG 4 cut(s) 255, 486, 525, 1201
AfaI GTAC 1 cut(s) 234
AfiI CCNNNNNNNGG 3 cut(s) 242, 821, 1106
AflIII ACRYGT 4 cut(s) 633, 994, 1200, 1255
AgsI TTSAA 7 cut(s) 338, 732, 760, 1128, 1310, 1352, 1400
AhlI ACTAGT 1 cut(s) 376
AjnI CCWGG 2 cut(s) 189, 820
AjuI GAANNNNNNNTTGG 2 cut(s) 1027, 1059
AluBI AGCT 9 cut(s) 334, 524, 545, 795, 835, 1062, 1149, 1244, 1332
AluI AGCT 9 cut(s) 334, 524, 545, 795, 835, 1062, 1149, 1244, 1332
Alw21I GWGCWC 2 cut(s) 904, 1342
Alw26I GTCTC 1 cut(s) 366
Alw44I GTGCAC 1 cut(s) 900
AlwI GGATC 1 cut(s) 1087
AlwNI CAGNNNCTG 1 cut(s) 278
Ama87I CYCGRG 1 cut(s) 1327
ApaLI GTGCAC 1 cut(s) 900
ApeKI GCWGC 1 cut(s) 1094
ApoI RAATTY 1 cut(s) 588
AspLEI GCGC 1 cut(s) 566
AsuC2I CCSGG 2 cut(s) 397, 644
AvaI CYCGRG 1 cut(s) 1327
BaeGI GKGCMC 1 cut(s) 904
BanII GRGCYC 2 cut(s) 87, 402
BarI GAAGNNNNNNTAC 2 cut(s) 318, 350
BbsI GAAGAC 2 cut(s) 1214, 1244
Bbv12I GWGCWC 2 cut(s) 904, 1342
BbvI GCAGC 1 cut(s) 1081
BccI CCATC 3 cut(s) 497, 823, 1205
BciT130I CCWGG 2 cut(s) 191, 822
BclI TGATCA 1 cut(s) 1195
BcnI CCSGG 2 cut(s) 397, 644
BcoDI GTCTC 1 cut(s) 366
BcuI ACTAGT 1 cut(s) 376
BfaI CTAG 4 cut(s) 21, 377, 1047, 1474
BfmI CTRYAG 1 cut(s) 1144
BfoI RGCGCY 1 cut(s) 567
BglII AGATCT 1 cut(s) 714
BisI GCNGC 2 cut(s) 298, 1095
BlsI GCNGC 2 cut(s) 299, 1096
Bme1390I CCNGG 4 cut(s) 191, 397, 644, 822
BmeT110I CYCGRG 1 cut(s) 1327
BmiI GGNNCC 1 cut(s) 1032
BmrFI CCNGG 4 cut(s) 191, 397, 644, 822
BmsI GCATC 4 cut(s) 659, 706, 820, 1445
BpiI GAAGAC 2 cut(s) 1214, 1244
BpmI CTGGAG 2 cut(s) 212, 1083
BpuEI CTTGAG 2 cut(s) 938, 1354
BpuMI CCSGG 2 cut(s) 397, 644
BsaJI CCNNGG 3 cut(s) 28, 643, 820
Bsc4I CCNNNNNNNGG 3 cut(s) 242, 821, 1106
Bse1I ACTGG 4 cut(s) 909, 994, 1017, 1038
Bse3DI GCAATG 3 cut(s) 663, 879, 1266
BseBI CCWGG 2 cut(s) 191, 822
BseDI CCNNGG 3 cut(s) 28, 643, 820
BseGI GGATG 4 cut(s) 604, 811, 815, 1144
BseLI CCNNNNNNNGG 3 cut(s) 242, 821, 1106
BseMI GCAATG 3 cut(s) 663, 879, 1266
BseNI ACTGG 4 cut(s) 909, 994, 1017, 1038
BseRI GAGGAG 1 cut(s) 1305
BseSI GKGCMC 1 cut(s) 904
BseXI GCAGC 1 cut(s) 1081
BsiHKAI GWGCWC 2 cut(s) 904, 1342
BsiHKCI CYCGRG 1 cut(s) 1327
BsiSI CCGG 2 cut(s) 396, 643
BslFI GGGAC 1 cut(s) 426
BslI CCNNNNNNNGG 3 cut(s) 242, 821, 1106
BsmAI GTCTC 1 cut(s) 366
BsmFI GGGAC 1 cut(s) 426
BsmI GAATGC 2 cut(s) 262, 1155
BsoBI CYCGRG 1 cut(s) 1327
Bsp1286I GDGCHC 4 cut(s) 87, 402, 904, 1342
Bsp143I GATC 5 cut(s) 381, 714, 949, 1079, 1195
BspACI CCGC 2 cut(s) 297, 300
BspLI GGNNCC 1 cut(s) 1032
BspPI GGATC 1 cut(s) 1087
BspQI GCTCTTC 1 cut(s) 825
BsrDI GCAATG 3 cut(s) 663, 879, 1266
BsrI ACTGG 4 cut(s) 909, 994, 1017, 1038
BssECI CCNNGG 3 cut(s) 28, 643, 820
BssMI GATC 5 cut(s) 381, 714, 949, 1079, 1195
Bst2UI CCWGG 2 cut(s) 191, 822
Bst4CI ACNGT 6 cut(s) 168, 245, 421, 478, 791, 1306
Bst6I CTCTTC 4 cut(s) 346, 519, 825, 1347
BstAPI GCANNNNNTGC 1 cut(s) 1268
BstC8I GCNNGC 2 cut(s) 332, 429
BstDEI CTNAG 3 cut(s) 365, 654, 796
BstF5I GGATG 4 cut(s) 604, 811, 815, 1144
BstH2I RGCGCY 1 cut(s) 567
BstHHI GCGC 1 cut(s) 566
BstKTI GATC 5 cut(s) 384, 717, 952, 1082, 1198
BstMAI GTCTC 1 cut(s) 366
BstMBI GATC 5 cut(s) 381, 714, 949, 1079, 1195
BstMWI GCNNNNNNNGC 1 cut(s) 1268
BstNI CCWGG 2 cut(s) 191, 822
BstNSI RCATGY 4 cut(s) 637, 729, 998, 1204
BstSCI CCNGG 4 cut(s) 189, 395, 642, 820
BstSFI CTRYAG 1 cut(s) 1144
BstSLI GKGCMC 1 cut(s) 904
BstV1I GCAGC 1 cut(s) 1081
BstV2I GAAGAC 2 cut(s) 1214, 1244
BstX2I RGATCY 1 cut(s) 714
BstYI RGATCY 1 cut(s) 714
BtsCI GGATG 4 cut(s) 604, 811, 815, 1144
BtsIMutI CAGTG 8 cut(s) 474, 751, 902, 1045, 1191, 1213, 1302, 1432
Cac8I GCNNGC 2 cut(s) 332, 429
CaiI CAGNNNCTG 1 cut(s) 278
CfoI GCGC 1 cut(s) 566
Csp6I GTAC 1 cut(s) 233
CviAII CATG 5 cut(s) 634, 726, 781, 995, 1201
CviQI GTAC 1 cut(s) 233
DdeI CTNAG 3 cut(s) 365, 654, 796
DpnI GATC 5 cut(s) 383, 716, 951, 1081, 1197
DpnII GATC 5 cut(s) 381, 714, 949, 1079, 1195
Eam1104I CTCTTC 4 cut(s) 346, 519, 825, 1347
EarI CTCTTC 4 cut(s) 346, 519, 825, 1347
Eco24I GRGCYC 2 cut(s) 87, 402
Eco32I GATATC 1 cut(s) 1423
Eco57I CTGAAG 4 cut(s) 255, 486, 525, 1201
Eco88I CYCGRG 1 cut(s) 1327
EcoRI GAATTC 1 cut(s) 588
EcoRII CCWGG 2 cut(s) 189, 820
EcoRV GATATC 1 cut(s) 1423
EcoT38I GRGCYC 2 cut(s) 87, 402
FaeI CATG 5 cut(s) 637, 729, 784, 998, 1204
FalI AAGNNNNNCTT 4 cut(s) 253, 285, 576, 608
FaqI GGGAC 1 cut(s) 426
FatI CATG 5 cut(s) 633, 725, 780, 994, 1200
FauNDI CATATG 2 cut(s) 505, 1132
FbaI TGATCA 1 cut(s) 1195
FblI GTMKAC 1 cut(s) 1143
Fnu4HI GCNGC 2 cut(s) 298, 1095
FokI GGATG 4 cut(s) 611, 798, 802, 1151
FriOI GRGCYC 2 cut(s) 87, 402
Fsp4HI GCNGC 2 cut(s) 298, 1095
FspBI CTAG 4 cut(s) 21, 377, 1047, 1474
GlaI GCGC 1 cut(s) 565
GluI GCNGC 2 cut(s) 298, 1095
GsuI CTGGAG 2 cut(s) 212, 1083
HaeII RGCGCY 1 cut(s) 567
HapII CCGG 2 cut(s) 396, 643
HhaI GCGC 1 cut(s) 566
Hin1II CATG 5 cut(s) 637, 729, 784, 998, 1204
Hin6I GCGC 1 cut(s) 564
HinP1I GCGC 1 cut(s) 564
HindIII AAGCTT 1 cut(s) 332
HinfI GANTC 9 cut(s) 118, 196, 291, 341, 703, 1071, 1274, 1313, 1400
HpaII CCGG 2 cut(s) 396, 643
Hpy166II GTNNAC 5 cut(s) 537, 580, 902, 1144, 1176
Hpy188I TCNGA 6 cut(s) 702, 870, 1003, 1030, 1076, 1441
Hpy188III TCNNGA 8 cut(s) 122, 153, 338, 712, 1047, 1100, 1327, 1469
Hpy8I GTNNAC 5 cut(s) 537, 580, 902, 1144, 1176
HpyAV CCTTC 5 cut(s) 74, 97, 102, 449, 616
HpyCH4III ACNGT 6 cut(s) 168, 245, 421, 478, 791, 1306
HpyCH4IV ACGT 1 cut(s) 1255
HpyCH4V TGCA 9 cut(s) 260, 330, 725, 811, 902, 1262, 1271, 1436, 1447
HpyF10VI GCNNNNNNNGC 1 cut(s) 1268
HpyF3I CTNAG 3 cut(s) 365, 654, 796
HpySE526I ACGT 1 cut(s) 1255
Hsp92II CATG 5 cut(s) 637, 729, 784, 998, 1204
HspAI GCGC 1 cut(s) 564
Ksp22I TGATCA 1 cut(s) 1195
Kzo9I GATC 5 cut(s) 381, 714, 949, 1079, 1195
LguI GCTCTTC 1 cut(s) 825
LmnI GCTCC 4 cut(s) 227, 647, 1067, 1102
Lsp1109I GCAGC 1 cut(s) 1081
LweI GCATC 4 cut(s) 659, 706, 820, 1445
MaeI CTAG 4 cut(s) 21, 377, 1047, 1474
MaeII ACGT 1 cut(s) 1255
MaeIII GTNAC 2 cut(s) 68, 636
MalI GATC 5 cut(s) 383, 716, 951, 1081, 1197
MboI GATC 5 cut(s) 381, 714, 949, 1079, 1195
MfeI CAATTG 1 cut(s) 1083
MflI RGATCY 1 cut(s) 714
MhlI GDGCHC 4 cut(s) 87, 402, 904, 1342
MlyI GAGTC 1 cut(s) 285
MmeI TCCRAC 1 cut(s) 1430
MnlI CCTC 9 cut(s) 38, 107, 670, 793, 864, 1070, 1283, 1286, 1334
MseI TTAA 4 cut(s) 213, 630, 719, 857
MslI CAYNNNNRTG 1 cut(s) 1230
MspI CCGG 2 cut(s) 396, 643
MspR9I CCNGG 4 cut(s) 191, 397, 644, 822
MunI CAATTG 1 cut(s) 1083
Mva1269I GAATGC 2 cut(s) 262, 1155
MvaI CCWGG 2 cut(s) 191, 822
MwoI GCNNNNNNNGC 1 cut(s) 1268
NciI CCSGG 2 cut(s) 397, 644
NdeI CATATG 2 cut(s) 505, 1132
NdeII GATC 5 cut(s) 381, 714, 949, 1079, 1195
NlaIII CATG 5 cut(s) 637, 729, 784, 998, 1204
NlaIV GGNNCC 1 cut(s) 1032
NspI RCATGY 4 cut(s) 637, 729, 998, 1204
PaeR7I CTCGAG 1 cut(s) 1327
PciI ACATGT 3 cut(s) 633, 994, 1200
PciSI GCTCTTC 1 cut(s) 825
PctI GAATGC 2 cut(s) 262, 1155
PfeI GAWTC 8 cut(s) 118, 196, 341, 703, 1071, 1274, 1313, 1400
PflMI CCANNNNNTGG 2 cut(s) 821, 1106
PkrI GCNGC 2 cut(s) 299, 1096
PleI GAGTC 1 cut(s) 285
PpsI GAGTC 1 cut(s) 285
PscI ACATGT 3 cut(s) 633, 994, 1200
Psp6I CCWGG 2 cut(s) 189, 820
PspGI CCWGG 2 cut(s) 189, 820
PspN4I GGNNCC 1 cut(s) 1032
PstNI CAGNNNCTG 1 cut(s) 278
PsuI RGATCY 1 cut(s) 714
RsaI GTAC 1 cut(s) 234
RsaNI GTAC 1 cut(s) 233
RseI CAYNNNNRTG 1 cut(s) 1230
SapI GCTCTTC 1 cut(s) 825
SaqAI TTAA 4 cut(s) 213, 630, 719, 857
SatI GCNGC 2 cut(s) 298, 1095
Sau3AI GATC 5 cut(s) 381, 714, 949, 1079, 1195
SchI GAGTC 1 cut(s) 285
ScrFI CCNGG 4 cut(s) 191, 397, 644, 822
SduI GDGCHC 4 cut(s) 87, 402, 904, 1342
SfaNI GCATC 4 cut(s) 659, 706, 820, 1445
SfcI CTRYAG 1 cut(s) 1144
Sfr274I CTCGAG 1 cut(s) 1327
SlaI CTCGAG 1 cut(s) 1327
SmiMI CAYNNNNRTG 1 cut(s) 1230
SmlI CTYRAG 3 cut(s) 953, 1327, 1333
SmoI CTYRAG 3 cut(s) 953, 1327, 1333
SpeI ACTAGT 1 cut(s) 376
SsiI CCGC 2 cut(s) 297, 300
SspMI CTAG 4 cut(s) 21, 377, 1047, 1474
StyD4I CCNGG 4 cut(s) 189, 395, 642, 820
TaaI ACNGT 6 cut(s) 168, 245, 421, 478, 791, 1306
TaiI ACGT 1 cut(s) 1258
TaqI TCGA 6 cut(s) 121, 174, 316, 876, 1288, 1328
TauI GCSGC 1 cut(s) 300
TfiI GAWTC 8 cut(s) 118, 196, 341, 703, 1071, 1274, 1313, 1400
Tru1I TTAA 4 cut(s) 213, 630, 719, 857
Tru9I TTAA 4 cut(s) 213, 630, 719, 857
TscAI CASTG 8 cut(s) 481, 751, 909, 1045, 1198, 1213, 1309, 1432
TseI GCWGC 1 cut(s) 1094
TspRI CASTG 8 cut(s) 481, 751, 909, 1045, 1198, 1213, 1309, 1432
Van91I CCANNNNNTGG 2 cut(s) 821, 1106
VneI GTGCAC 1 cut(s) 900
XapI RAATTY 1 cut(s) 588
XbaI TCTAGA 1 cut(s) 1046
XceI RCATGY 4 cut(s) 637, 729, 998, 1204
XhoI CTCGAG 1 cut(s) 1327
XmiI GTMKAC 1 cut(s) 1143
XspI CTAG 4 cut(s) 21, 377, 1047, 1474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.