Rmu_sc0008140.1_g000008
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008140.1
Physical Location & Seq
Reverse (-)
22978 .. 24024
1047 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008140.1_g000008.1.cds

Sequence Viewer

Length: 1047 bp
atggagcttcatatgctcaacttctgcgcatttcgatatacccaccttcatgtcatgaccacccttttccttctcaccaaccttttccaatctaccatctttgcaaatgcattgagcaatgaaaccgatcgcttggctttgctgaaattcaaagattgcatagccaccgatccagatgggctgttgaactcatggaatgactccgttcacttctgcaaatggcaaggaattacttgtggcagacggcatcaaagagtaacagccttgaatctaccagaagctgttttgcacggaaccatatcaccatacattggcaacctctcctttcttaggttcatcaaccttcaaaacaacagcttctctggcaagattccgcaacaagttgaacatttattccgactccgacatctcaatctcagttacaacatgttggaggggggaattccagtcaacctgaccttgtgtgcggaactgagcatcttaagtattggaagaaaccgccttaccggcaaaattccttcagagatcgggtcattgaggaagcttgtgtttctcaatctagagacaaacaatctgacggggcccatcccaccttccttgggaaatctttcatcaatcactcgactttacttaccaatgaacaatttggtgggcaacgtaccagaggtgctaggccaattgagaagcttagaagttttttcaattggtcccaataatctctctggtttgatccctccctccctttttaacatatcatctatgaaactcatttcacctgcgggtaataagtttaagggcagtattcctcctggtataggactgattggatttgggacgaggttgatggtggagctcattggcggggcacgtcgactgcttctccagaagcttgacgacctctttcaactggtcattggagaaagctctgacgcggatcgacgtcgtccacggcgaggaggagaacgacgacagcacccgacgtgccaaggaggcgcgcgaggttatgcggtggggactgagagtcctaatcatggacgacgacgatga

Protein Analysis

348

Amino Acids

38.58

Weight (kDa)

9.98

Isoelectric Point (pI)

40.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 784
AatII GACGTC 1 cut(s) 943
Acc16I TGCGCA 1 cut(s) 28
Acc36I ACCTGC 1 cut(s) 784
AccB7I CCANNNNNTGG 1 cut(s) 311
AccI GTMKAC 1 cut(s) 871
AccII CGCG 3 cut(s) 932, 995, 997
AciI CCGC 7 cut(s) 374, 467, 499, 779, 861, 932, 1007
AclWI GGATC 3 cut(s) 164, 724, 942
AcsI RAATTY 3 cut(s) 146, 441, 513
AcuI CTGAAG 1 cut(s) 504
AcyI GRCGYC 1 cut(s) 940
AfaI GTAC 1 cut(s) 660
AfiI CCNNNNNNNGG 6 cut(s) 311, 330, 599, 815, 953, 1031
AflII CTTAAG 1 cut(s) 481
AflIII ACRYGT 1 cut(s) 426
AgsI TTSAA 7 cut(s) 151, 187, 268, 347, 386, 702, 905
AhdI GACNNNNNGTC 1 cut(s) 1020
AjiI CACGTC 2 cut(s) 869, 981
AjnI CCWGG 1 cut(s) 808
AloI GAACNNNNNNTCC 2 cut(s) 378, 410
AluBI AGCT 8 cut(s) 7, 281, 357, 544, 687, 853, 889, 924
AluI AGCT 8 cut(s) 7, 281, 357, 544, 687, 853, 889, 924
Alw21I GWGCWC 1 cut(s) 855
Alw26I GTCTC 1 cut(s) 557
AlwI GGATC 3 cut(s) 164, 724, 942
AlwNI CAGNNNCTG 1 cut(s) 281
AoxI GGCC 2 cut(s) 581, 673
ApaI GGGCCC 1 cut(s) 585
ApoI RAATTY 3 cut(s) 146, 441, 513
Asp700I GAANNNNTTC 1 cut(s) 607
AspLEI GCGC 3 cut(s) 29, 995, 997
AspS9I GGNCC 3 cut(s) 581, 582, 707
AsuHPI GGTGA 3 cut(s) 67, 294, 765
AvaII GGWCC 1 cut(s) 707
BaeGI GKGCMC 2 cut(s) 585, 868
BanII GRGCYC 2 cut(s) 585, 855
Bbv12I GWGCWC 1 cut(s) 855
BccI CCATC 4 cut(s) 104, 170, 593, 838
BceAI ACGGC 2 cut(s) 260, 965
BciT130I CCWGG 1 cut(s) 810
BcoDI GTCTC 1 cut(s) 557
BfaI CTAG 2 cut(s) 560, 671
BfrI CTTAAG 1 cut(s) 481
BfuAI ACCTGC 1 cut(s) 784
BglI GCCNNNNNGGC 2 cut(s) 507, 990
Bme1390I CCNGG 1 cut(s) 810
Bme18I GGWCC 1 cut(s) 707
BmeRI GACNNNNNGTC 1 cut(s) 1020
BmgBI CACGTC 2 cut(s) 869, 981
BmgT120I GGNCC 3 cut(s) 581, 582, 707
BmiI GGNNCC 4 cut(s) 295, 582, 583, 709
BmrFI CCNGG 1 cut(s) 810
BmsI GCATC 2 cut(s) 256, 486
BpmI CTGGAG 1 cut(s) 866
BsaHI GRCGYC 1 cut(s) 940
BsaJI CCNNGG 3 cut(s) 597, 947, 985
BsaXI ACNNNNNCTCC 2 cut(s) 864, 894
Bsc4I CCNNNNNNNGG 6 cut(s) 311, 330, 599, 815, 953, 1031
Bse118I RCCGGY 1 cut(s) 506
Bse1I ACTGG 2 cut(s) 446, 912
Bse3DI GCAATG 1 cut(s) 124
BseBI CCWGG 1 cut(s) 810
BseDI CCNNGG 3 cut(s) 597, 947, 985
BseGI GGATG 1 cut(s) 585
BseLI CCNNNNNNNGG 6 cut(s) 311, 330, 599, 815, 953, 1031
BseMI GCAATG 1 cut(s) 124
BseMII CTCAG 3 cut(s) 430, 464, 1008
BseNI ACTGG 2 cut(s) 446, 912
BsePI GCGCGC 1 cut(s) 993
BseRI GAGGAG 2 cut(s) 969, 972
BseSI GKGCMC 2 cut(s) 585, 868
Bsh1236I CGCG 3 cut(s) 932, 995, 997
Bsh1285I CGRYCG 1 cut(s) 130
BshFI GGCC 2 cut(s) 583, 675
BsiEI CGRYCG 1 cut(s) 130
BsiHKAI GWGCWC 1 cut(s) 855
BsiSI CCGG 1 cut(s) 507
BslFI GGGAC 3 cut(s) 693, 847, 1027
BslI CCNNNNNNNGG 6 cut(s) 311, 330, 599, 815, 953, 1031
BsmAI GTCTC 1 cut(s) 557
BsmFI GGGAC 3 cut(s) 693, 847, 1027
BsnI GGCC 2 cut(s) 583, 675
Bsp120I GGGCCC 1 cut(s) 581
Bsp1286I GDGCHC 3 cut(s) 585, 855, 868
Bsp143I GATC 5 cut(s) 127, 169, 525, 729, 934
BspACI CCGC 7 cut(s) 374, 467, 499, 779, 861, 932, 1007
BspANI GGCC 2 cut(s) 583, 675
BspCNI CTCAG 3 cut(s) 429, 465, 1009
BspFNI CGCG 3 cut(s) 932, 995, 997
BspHI TCATGA 1 cut(s) 54
BspLI GGNNCC 4 cut(s) 295, 582, 583, 709
BspMI ACCTGC 1 cut(s) 784
BspPI GGATC 3 cut(s) 164, 724, 942
BspTI CTTAAG 1 cut(s) 481
BsrDI GCAATG 1 cut(s) 124
BsrFI RCCGGY 1 cut(s) 506
BsrI ACTGG 2 cut(s) 446, 912
BssAI RCCGGY 1 cut(s) 506
BssECI CCNNGG 3 cut(s) 597, 947, 985
BssHII GCGCGC 1 cut(s) 993
BssMI GATC 5 cut(s) 127, 169, 525, 729, 934
BssNI GRCGYC 1 cut(s) 940
BssT1I CCWWGG 2 cut(s) 597, 985
Bst2UI CCWGG 1 cut(s) 810
BstACI GRCGYC 1 cut(s) 940
BstAFI CTTAAG 1 cut(s) 481
BstC8I GCNNGC 1 cut(s) 995
BstDEI CTNAG 5 cut(s) 329, 416, 473, 688, 1017
BstDSI CCRYGG 1 cut(s) 947
BstENI CCTNNNNNAGG 2 cut(s) 328, 813
BstF5I GGATG 1 cut(s) 585
BstFNI CGCG 3 cut(s) 932, 995, 997
BstHHI GCGC 3 cut(s) 29, 995, 997
BstKTI GATC 5 cut(s) 130, 172, 528, 732, 937
BstMAI GTCTC 1 cut(s) 557
BstMBI GATC 5 cut(s) 127, 169, 525, 729, 934
BstMCI CGRYCG 1 cut(s) 130
BstMWI GCNNNNNNNGC 4 cut(s) 13, 363, 507, 990
BstNI CCWGG 1 cut(s) 810
BstNSI RCATGY 1 cut(s) 430
BstSCI CCNGG 1 cut(s) 808
BstSLI GKGCMC 2 cut(s) 585, 868
BstUI CGCG 3 cut(s) 932, 995, 997
BsuRI GGCC 2 cut(s) 583, 675
BtgI CCRYGG 1 cut(s) 947
BtrI CACGTC 2 cut(s) 869, 981
BtsCI GGATG 1 cut(s) 585
BveI ACCTGC 1 cut(s) 784
Cac8I GCNNGC 1 cut(s) 995
CaiI CAGNNNCTG 1 cut(s) 281
CciI TCATGA 1 cut(s) 54
CfoI GCGC 3 cut(s) 29, 995, 997
Cfr10I RCCGGY 1 cut(s) 506
Cfr13I GGNCC 3 cut(s) 581, 582, 707
CseI GACGC 1 cut(s) 938
Csp6I GTAC 1 cut(s) 659
CspCI CAANNNNNGTGG 2 cut(s) 579, 614
CviAII CATG 5 cut(s) 50, 55, 192, 427, 1031
CviQI GTAC 1 cut(s) 659
DdeI CTNAG 5 cut(s) 329, 416, 473, 688, 1017
DpnI GATC 5 cut(s) 129, 171, 527, 731, 936
DpnII GATC 5 cut(s) 127, 169, 525, 729, 934
DriI GACNNNNNGTC 1 cut(s) 1020
Eam1105I GACNNNNNGTC 1 cut(s) 1020
Ecl136II GAGCTC 1 cut(s) 853
Eco130I CCWWGG 2 cut(s) 597, 985
Eco24I GRGCYC 2 cut(s) 585, 855
Eco47I GGWCC 1 cut(s) 707
Eco53kI GAGCTC 1 cut(s) 853
Eco57I CTGAAG 1 cut(s) 504
EcoICRI GAGCTC 1 cut(s) 853
EcoNI CCTNNNNNAGG 2 cut(s) 328, 813
EcoO109I RGGNCCY 1 cut(s) 581
EcoRI GAATTC 1 cut(s) 441
EcoRII CCWGG 1 cut(s) 808
EcoT14I CCWWGG 2 cut(s) 597, 985
EcoT22I ATGCAT 1 cut(s) 112
EcoT38I GRGCYC 2 cut(s) 585, 855
ErhI CCWWGG 2 cut(s) 597, 985
FaeI CATG 5 cut(s) 53, 58, 195, 430, 1034
FaqI GGGAC 3 cut(s) 693, 847, 1027
FatI CATG 5 cut(s) 49, 54, 191, 426, 1030
FauI CCCGC 2 cut(s) 772, 854
FauNDI CATATG 1 cut(s) 12
FblI GTMKAC 1 cut(s) 871
FokI GGATG 1 cut(s) 572
FriOI GRGCYC 2 cut(s) 585, 855
FspBI CTAG 2 cut(s) 560, 671
FspI TGCGCA 1 cut(s) 28
GlaI GCGC 3 cut(s) 28, 994, 996
GsuI CTGGAG 1 cut(s) 866
HaeIII GGCC 2 cut(s) 583, 675
HapII CCGG 1 cut(s) 507
HgaI GACGC 1 cut(s) 938
HhaI GCGC 3 cut(s) 29, 995, 997
Hin1I GRCGYC 1 cut(s) 940
Hin1II CATG 5 cut(s) 53, 58, 195, 430, 1034
Hin6I GCGC 3 cut(s) 27, 993, 995
HinP1I GCGC 3 cut(s) 27, 993, 995
HincII GTYRAC 2 cut(s) 451, 872
HindII GTYRAC 2 cut(s) 451, 872
HindIII AAGCTT 3 cut(s) 542, 685, 887
HinfI GANTC 5 cut(s) 200, 268, 370, 399, 1021
HpaII CCGG 1 cut(s) 507
HphI GGTGA 3 cut(s) 67, 294, 765
Hpy166II GTNNAC 4 cut(s) 208, 451, 872, 947
Hpy188I TCNGA 5 cut(s) 398, 404, 523, 576, 928
Hpy188III TCNNGA 4 cut(s) 55, 173, 560, 883
Hpy8I GTNNAC 4 cut(s) 208, 451, 872, 947
Hpy99I CGWCG 7 cut(s) 873, 942, 945, 969, 982, 1041, 1044
HpyAV CCTTC 5 cut(s) 56, 80, 353, 528, 603
HpyCH4IV ACGT 4 cut(s) 657, 868, 940, 980
HpyCH4V TGCA 5 cut(s) 104, 110, 159, 216, 289
HpyF10VI GCNNNNNNNGC 4 cut(s) 13, 363, 507, 990
HpyF3I CTNAG 5 cut(s) 329, 416, 473, 688, 1017
HpySE526I ACGT 4 cut(s) 657, 868, 940, 980
Hsp92I GRCGYC 1 cut(s) 940
Hsp92II CATG 5 cut(s) 53, 58, 195, 430, 1034
HspAI GCGC 3 cut(s) 27, 993, 995
Kzo9I GATC 5 cut(s) 127, 169, 525, 729, 934
LmnI GCTCC 2 cut(s) 4, 850
LweI GCATC 2 cut(s) 256, 486
MaeI CTAG 2 cut(s) 560, 671
MaeII ACGT 4 cut(s) 657, 868, 940, 980
MaeIII GTNAC 2 cut(s) 256, 419
MalI GATC 5 cut(s) 129, 171, 527, 731, 936
MboI GATC 5 cut(s) 127, 169, 525, 729, 934
MboII GAAGA 1 cut(s) 504
MfeI CAATTG 2 cut(s) 677, 702
MhlI GDGCHC 3 cut(s) 585, 855, 868
MluCI AATT 7 cut(s) 146, 228, 441, 513, 643, 677, 702
MlyI GAGTC 3 cut(s) 194, 393, 1030
MmeI TCCRAC 3 cut(s) 411, 421, 427
Mph1103I ATGCAT 1 cut(s) 112
MroXI GAANNNNTTC 1 cut(s) 607
MseI TTAA 3 cut(s) 482, 747, 792
MslI CAYNNNNRTG 1 cut(s) 48
MspCI CTTAAG 1 cut(s) 481
MspI CCGG 1 cut(s) 507
MspR9I CCNGG 1 cut(s) 810
MunI CAATTG 2 cut(s) 677, 702
MvaI CCWGG 1 cut(s) 810
MvnI CGCG 3 cut(s) 932, 995, 997
MwoI GCNNNNNNNGC 4 cut(s) 13, 363, 507, 990
NdeI CATATG 1 cut(s) 12
NdeII GATC 5 cut(s) 127, 169, 525, 729, 934
NlaIII CATG 5 cut(s) 53, 58, 195, 430, 1034
NlaIV GGNNCC 4 cut(s) 295, 582, 583, 709
NsbI TGCGCA 1 cut(s) 28
NsiI ATGCAT 1 cut(s) 112
NspI RCATGY 1 cut(s) 430
PagI TCATGA 1 cut(s) 54
PaqCI CACCTGC 1 cut(s) 784
PauI GCGCGC 1 cut(s) 993
PciI ACATGT 1 cut(s) 426
PcsI WCGNNNNNNNCGW 1 cut(s) 949
PdmI GAANNNNTTC 1 cut(s) 607
PfeI GAWTC 2 cut(s) 268, 370
PflFI GACNNNGTC 1 cut(s) 942
PflMI CCANNNNNTGG 1 cut(s) 311
Ple19I CGATCG 1 cut(s) 130
PleI GAGTC 3 cut(s) 194, 393, 1029
PpsI GAGTC 3 cut(s) 194, 393, 1029
PscI ACATGT 1 cut(s) 426
Psp124BI GAGCTC 1 cut(s) 855
Psp6I CCWGG 1 cut(s) 808
PspGI CCWGG 1 cut(s) 808
PspN4I GGNNCC 4 cut(s) 295, 582, 583, 709
PspOMI GGGCCC 1 cut(s) 581
PspPI GGNCC 3 cut(s) 581, 582, 707
PstNI CAGNNNCTG 1 cut(s) 281
PsyI GACNNNGTC 1 cut(s) 942
PteI GCGCGC 1 cut(s) 993
PvuI CGATCG 1 cut(s) 130
RsaI GTAC 1 cut(s) 660
RsaNI GTAC 1 cut(s) 659
RseI CAYNNNNRTG 1 cut(s) 48
SacI GAGCTC 1 cut(s) 855
SalI GTCGAC 1 cut(s) 870
SaqAI TTAA 3 cut(s) 482, 747, 792
Sau3AI GATC 5 cut(s) 127, 169, 525, 729, 934
Sau96I GGNCC 3 cut(s) 581, 582, 707
SchI GAGTC 3 cut(s) 194, 393, 1030
ScrFI CCNGG 1 cut(s) 810
SduI GDGCHC 3 cut(s) 585, 855, 868
SfaNI GCATC 2 cut(s) 256, 486
SinI GGWCC 1 cut(s) 707
SmiMI CAYNNNNRTG 1 cut(s) 48
SmlI CTYRAG 1 cut(s) 481
SmoI CTYRAG 1 cut(s) 481
Sse9I AATT 7 cut(s) 146, 228, 441, 513, 643, 677, 702
SsiI CCGC 7 cut(s) 374, 467, 499, 779, 861, 932, 1007
SspMI CTAG 2 cut(s) 560, 671
SstI GAGCTC 1 cut(s) 855
StyD4I CCNGG 1 cut(s) 808
StyI CCWWGG 2 cut(s) 597, 985
TaiI ACGT 4 cut(s) 660, 871, 943, 983
TaqI TCGA 4 cut(s) 34, 622, 871, 937
TasI AATT 7 cut(s) 146, 228, 441, 513, 643, 677, 702
TfiI GAWTC 2 cut(s) 268, 370
Tru1I TTAA 3 cut(s) 482, 747, 792
Tru9I TTAA 3 cut(s) 482, 747, 792
TspDTI ATGAA 6 cut(s) 38, 135, 325, 600, 653, 776
TspGWI ACGGA 2 cut(s) 193, 306
Tth111I GACNNNGTC 1 cut(s) 942
Van91I CCANNNNNTGG 1 cut(s) 311
Vha464I CTTAAG 1 cut(s) 481
VpaK11BI GGWCC 1 cut(s) 707
XagI CCTNNNNNAGG 2 cut(s) 328, 813
XapI RAATTY 3 cut(s) 146, 441, 513
XbaI TCTAGA 1 cut(s) 559
XceI RCATGY 1 cut(s) 430
XmiI GTMKAC 1 cut(s) 871
XmnI GAANNNNTTC 1 cut(s) 607
XspI CTAG 2 cut(s) 560, 671
ZraI GACGTC 1 cut(s) 941
Zsp2I ATGCAT 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.