RchiOBHm_Chr1g0337411
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
29153892 .. 29156684
2793 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56531

Sequence Viewer

Length: 2670 bp
ATGGAGAGCTCATGCCTGGTTGTGAGGATTTGGTCAGTATTCATGTCACTGTTTCCCCTGATGATCATCACTATGGCCTCTTCAAATCTGAGAGCAAATAAGGTGGAAAGACTATCCTTGCTTGCCTTTAAAGCTGTAGTCAGTGATCCTCTGGGCATCCTTAGCTCCTGGAATTATTCCTCCAACTTATGTCATGAGTGGCGAGGGATTACTTGCGGCAGAAGACGCCCGAGAGTCAAGGTTCTCGACCTCCGGTCCAGCCAGCTGAAGGGTGTTCTATCTCCACATATCGGAAACTTGAGCTTTCTCAGGACATTAAATCTCCGAAGGAATAGCTTCACCGGCACCATCCCTCAAGAAGTTGGTCGACTGTCCCGGCTGCAAGTACTAAACCTCGGGGACAACTTGTTCAAAGGTTATATCCCCATGAATATATCACATTGTTCTAACCTCCATTATCTTTTTTTGGCTAATAACAGTCTTACTGGCGAAATTCCAATTGAACTTGGCTCATTGTTGAAGCTTCAAGAACTTATTTTGCGCAGGAACAATTTAATAGGGGAAATTCCCCCTTCCTTTGGAAATTTTTCTTCTCTTAAAGTTCTTTCTATGAAAGAAAATAATCTGCGTGGCCTCATGAATAGCCGCCTTGGGAAATTGAAAAGCTTAAGAGATCTTTCATTGGGTACAAATAGATTGTCTGGTACCATCCCTCCCTCCATATACAACCTTTCTTCAATTCAACACATTTCTGTGGTTGGAAACCAACTTCATGGAACTCTTCCTTCTGGGTTGGGCTACACAATATTTCCAAAGCTTCAAATCTTTCAGTTCCAAATGAACAGATTCAGTGGACCAATTCCATCTACTATCTCAAACGCATCCTACCTTTCACGATTTGGGATCTCTAATAATACTTTTACCGGAAAAGTCCCTAGTTTGGCAAGACTGTCCAATCTGGTTCGGCTGGAAATTGATGATAATAATCTTGGAAATGAGGATGGTGAATTGGATTTTCTCTCTTCTCTGGTCAATTGTACCGGTTTAGAACTTTTGGATATTAATGGGAATAATTTTCAAGGAGTTCTACCTGAATCTATCAGCAATCTCTCAACAAAGCTCAAGGTGATGAGCTTAGGAAGGAATCAGCTAAGAGGAAGCATTCCGATTGGGATAGGAAATCTCATCAACTTGTTTGTATTGAGCTTCGAGGAAAACCTATTGACGGGCCCTATACCGAGTTCAATATGTAAGCCAAGTAAACTAAGCAGTCTGTTTATAAACCATAATCAGTTATCAGGTACGATCCCTTTTTGTTTAAGAAATCTAACTTGGTTAAGCAGATTAGACCTCTCATTTAATGATTTTGAAGGCGAAGTACCCATTGATGGAGTTTTCAGGAATTCAACTGCGGTTTGTCTCGTGGGAAACAGAGGACTTTGTGGAGGTGTAACTCAGTTGAACTTGCCTCTATGTTGTTCTGAGTCTTCTGACGGGAGCCTGTTTCCTCTTTGGACATTAGTCTTCTCAGTTTTCTCTTTGGCCGTTGGAAGTATTTTGGTGTTGTGCTATCACTGCTGTGTGCCCCTTTATAGATCAAATAAAAGGAAAGCCAAAGCTAAGGTAACCGTGATACCATTATTGGATCTTTCACTCTTAAAATTGTCATATGGTGATCTCCTAAAAGCAACTGATGGCTTCTCTTCTCGGAATTTGATTGGCTCTGGTAGTTCTGGTTCTGTGTATTGGGGAGTTCTTGATCAACAGGAGGAAACAATTGTTGCTGTGAAAGTACTCAACCTTCAAAGTTCAAGAGCTTCTAGAAGTTTTGTAGCTGAATGTAAAGTCCTGAAAAGCATTAGGCACCGAAATCTTGTTAAACTAGTGACCGCTTGCTCAAGTATTGATTTTCAAGGAAATGAATTCAAAGCTTTGGTTTTTGAGTTCATGTTGGATGGAAATCTAGATGAAATGTTGCATTATTCAGCTCATACAGTGGTTCGGGTGCCCACTGTGCAGGTGCATTTGAATCTTATCCAAAGGGTAAATATTGCCATTGATGTAGCTAATGCTTTGGATTATTTGCACAGCCACTTTCACAACCCTATAGTTCATTGTGATTTAAAGCCGAGTAATGTTCTCCTAGAAAAGGACATGACTGCCCGTGTCTGTGATTTTGGGTTAGCAACCTACCTCCCACATACTTCTTCACTAGAGAGTTCTTCCAATATAATAAGGGGGTCCATCGGCTATTTTCCCCCAGAGTATGGCATGGGAGGTGCGGTCTCAACGTATGGGGATGTGTATAGCTACGGAATCTTGTTACTGGAGATGCTTACTGGTAAGAGGCCAACAGATGATATGTTTACAGATGACACGAACTTGCACAATTTTGTTCTGATGGCTTTGCCTGAACGTGTGAAAGAAATATGTGATCCGTTGCTTCTTCAAGAAAAGGAAAGCAGCACTAGTACAAAGCCTGCAAGCAATAGGAATGATGTCCAAAATGATGAAACACGAAGAGTTGAAGAGTGTCTTATTTCCATTGCTAGGATAGGAGTTGCTTGTTCTGTGCATTTGCCCAAAGCACGAATGGAGATTGGAAAAGTTGTAGCTGAATTACGTGTAATCAGGGATGTACTGACTGGAACCAGGATGCTTAGAGAGTAG

Protein Analysis

889

Amino Acids

98.25

Weight (kDa)

8.89

Isoelectric Point (pI)

39.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 72 1.3e-09 Leucine rich repeat N-terminal domain
LRR_8 PF13855 77 - 136 9.3e-06 Leucine rich repeat
LRR_14 PF23598 79 - 180 4.4e-09 Leucine-rich repeat region
LRR_14 PF23598 129 - 229 3.9e-08 Leucine-rich repeat region
LRR_8 PF13855 174 - 233 5.2e-06 Leucine rich repeat
LRR_14 PF23598 191 - 366 7.5e-10 Leucine-rich repeat region
Pkinase PF00069 569 - 796 1.5e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 571 - 792 4.2e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1280
AarI CACCTGC 1 cut(s) 2008
Acc16I TGCGCA 1 cut(s) 542
Acc36I ACCTGC 1 cut(s) 2008
Acc65I GGTACC 1 cut(s) 704
AccB1I GGYRCC 4 cut(s) 344, 704, 1863, 2005
AccB7I CCANNNNNTGG 1 cut(s) 2267
AccI GTMKAC 1 cut(s) 367
AciI CCGC 5 cut(s) 216, 646, 1412, 1890, 2282
AclWI GGATC 5 cut(s) 140, 911, 1300, 1653, 2429
AcoI YGGCCR 1 cut(s) 1542
AcsI RAATTY 6 cut(s) 492, 564, 583, 1402, 1711, 1922
AcuI CTGAAG 1 cut(s) 287
AcyI GRCGYC 1 cut(s) 226
AfaI GTAC 9 cut(s) 387, 688, 706, 1039, 1303, 1380, 1794, 2473, 2640
AfiI CCNNNNNNNGG 9 cut(s) 268, 290, 578, 940, 1225, 1388, 2149, 2267, 2550
AflII CTTAAG 1 cut(s) 667
AflIII ACRYGT 2 cut(s) 2416, 2623
AgeI ACCGGT 1 cut(s) 1040
AhdI GACNNNNNGTC 1 cut(s) 253
AhlI ACTAGT 2 cut(s) 1882, 2468
AjnI CCWGG 3 cut(s) 15, 167, 2651
AjuI GAANNNNNNNTTGG 2 cut(s) 1315, 1347
AleI CACNNNNGTG 1 cut(s) 1578
AloI GAACNNNNNNTCC 2 cut(s) 392, 424
Alw21I GWGCWC 1 cut(s) 11
Alw26I GTCTC 2 cut(s) 1424, 2290
AlwI GGATC 5 cut(s) 140, 911, 1300, 1653, 2429
Ama87I CYCGRG 2 cut(s) 229, 395
AoxI GGCC 5 cut(s) 75, 631, 1228, 1542, 2348
ApaI GGGCCC 1 cut(s) 1232
ApeKI GCWGC 2 cut(s) 379, 2463
ApoI RAATTY 6 cut(s) 492, 564, 583, 1402, 1711, 1922
ArsI GACNNNNNNTTYG 2 cut(s) 683, 715
AseI ATTAAT 1 cut(s) 1062
AsiGI ACCGGT 1 cut(s) 1040
Asp700I GAANNNNTTC 3 cut(s) 335, 586, 845
Asp718I GGTACC 1 cut(s) 704
AspLEI GCGC 1 cut(s) 543
AspS9I GGNCC 5 cut(s) 255, 854, 1228, 1229, 2241
AsuC2I CCSGG 1 cut(s) 376
AsuHPI GGTGA 4 cut(s) 331, 1016, 1138, 1685
AvaI CYCGRG 2 cut(s) 229, 395
AvaII GGWCC 3 cut(s) 255, 854, 2241
BaeGI GKGCMC 3 cut(s) 1232, 1587, 2010
BanI GGYRCC 4 cut(s) 344, 704, 1863, 2005
BanII GRGCYC 2 cut(s) 11, 1232
BarI GAAGNNNNNNTAC 4 cut(s) 1362, 1394, 1785, 1817
BauI CACGAG 1 cut(s) 1421
BbsI GAAGAC 3 cut(s) 229, 1479, 1516
Bbv12I GWGCWC 1 cut(s) 11
BbvI GCAGC 2 cut(s) 366, 2475
BccI CCATC 9 cut(s) 356, 716, 871, 995, 1382, 1688, 1949, 2252, 2395
BceAI ACGGC 1 cut(s) 1529
BciT130I CCWGG 3 cut(s) 17, 169, 2653
BclI TGATCA 2 cut(s) 63, 1759
BcnI CCSGG 1 cut(s) 376
BcoDI GTCTC 2 cut(s) 1424, 2290
BcuI ACTAGT 2 cut(s) 1882, 2468
BfaI CTAG 8 cut(s) 936, 1821, 1883, 1964, 2144, 2213, 2469, 2550
BfmI CTRYAG 2 cut(s) 135, 2106
BfrI CTTAAG 1 cut(s) 667
BfuAI ACCTGC 1 cut(s) 2008
BglII AGATCT 1 cut(s) 673
BisI GCNGC 4 cut(s) 217, 380, 646, 2464
BlsI GCNGC 4 cut(s) 218, 381, 647, 2465
BmcAI AGTACT 2 cut(s) 387, 1794
Bme1390I CCNGG 4 cut(s) 17, 169, 376, 2653
Bme18I GGWCC 3 cut(s) 255, 854, 2241
BmeRI GACNNNNNGTC 1 cut(s) 253
BmeT110I CYCGRG 2 cut(s) 229, 395
BmgT120I GGNCC 5 cut(s) 255, 854, 1228, 1229, 2241
BmiI GGNNCC 8 cut(s) 346, 706, 1230, 1499, 1865, 2007, 2242, 2650
BmrFI CCNGG 4 cut(s) 17, 169, 376, 2653
BmsI GCATC 4 cut(s) 165, 890, 2322, 2646
BoxI GACNNNNGTC 1 cut(s) 1520
BpiI GAAGAC 3 cut(s) 229, 1479, 1516
BpmI CTGGAG 1 cut(s) 2348
Bpu10I CCTNAGC 3 cut(s) 161, 1135, 1620
BpuEI CTTGAG 4 cut(s) 319, 339, 1106, 1882
BpuMI CCSGG 1 cut(s) 376
BsaAI YACGTR 1 cut(s) 2624
BsaBI GATNNNNATC 3 cut(s) 65, 984, 1959
BsaHI GRCGYC 1 cut(s) 226
BsaI GGTCTC 1 cut(s) 2290
BsaJI CCNNGG 2 cut(s) 394, 649
BsaWI WCCGGW 3 cut(s) 252, 923, 1040
BsaXI ACNNNNNCTCC 4 cut(s) 697, 727, 2268, 2298
Bsc4I CCNNNNNNNGG 9 cut(s) 268, 290, 578, 940, 1225, 1388, 2149, 2267, 2550
Bse118I RCCGGY 2 cut(s) 341, 1040
Bse1I ACTGG 4 cut(s) 490, 2331, 2344, 2650
Bse3DI GCAATG 1 cut(s) 2544
Bse8I GATNNNNATC 3 cut(s) 65, 984, 1959
BseBI CCWGG 3 cut(s) 17, 169, 2653
BseDI CCNNGG 2 cut(s) 394, 649
BseGI GGATG 9 cut(s) 156, 348, 708, 881, 1006, 1960, 2305, 2641, 2661
BseJI GATNNNNATC 3 cut(s) 65, 984, 1959
BseLI CCNNNNNNNGG 9 cut(s) 268, 290, 578, 940, 1225, 1388, 2149, 2267, 2550
BseMI GCAATG 1 cut(s) 2544
BseMII CTCAG 5 cut(s) 80, 322, 1469, 1473, 1542
BseNI ACTGG 4 cut(s) 490, 2331, 2344, 2650
BseSI GKGCMC 3 cut(s) 1232, 1587, 2010
BseXI GCAGC 2 cut(s) 366, 2475
BsgI GTGCAG 1 cut(s) 2036
BshFI GGCC 5 cut(s) 77, 633, 1230, 1544, 2350
BshNI GGYRCC 4 cut(s) 344, 704, 1863, 2005
BshTI ACCGGT 1 cut(s) 1040
BsiHKAI GWGCWC 1 cut(s) 11
BsiHKCI CYCGRG 2 cut(s) 229, 395
BsiSI CCGG 5 cut(s) 253, 342, 376, 924, 1041
BslFI GGGAC 3 cut(s) 358, 413, 917
BslI CCNNNNNNNGG 9 cut(s) 268, 290, 578, 940, 1225, 1388, 2149, 2267, 2550
BsmAI GTCTC 2 cut(s) 1424, 2290
BsmFI GGGAC 3 cut(s) 358, 413, 917
BsmI GAATGC 1 cut(s) 1161
BsnI GGCC 5 cut(s) 77, 633, 1230, 1544, 2350
Bso31I GGTCTC 1 cut(s) 2290
BsoBI CYCGRG 2 cut(s) 229, 395
Bsp120I GGGCCC 1 cut(s) 1228
Bsp1286I GDGCHC 4 cut(s) 11, 1232, 1587, 2010
BspACI CCGC 5 cut(s) 216, 646, 1412, 1890, 2282
BspANI GGCC 5 cut(s) 77, 633, 1230, 1544, 2350
BspCNI CTCAG 5 cut(s) 81, 321, 1468, 1474, 1541
BspHI TCATGA 2 cut(s) 193, 636
BspLI GGNNCC 8 cut(s) 346, 706, 1230, 1499, 1865, 2007, 2242, 2650
BspMI ACCTGC 1 cut(s) 2008
BspPI GGATC 5 cut(s) 140, 911, 1300, 1653, 2429
BspT107I GGYRCC 4 cut(s) 344, 704, 1863, 2005
BspTI CTTAAG 1 cut(s) 667
BspTNI GGTCTC 1 cut(s) 2290
BsrDI GCAATG 1 cut(s) 2544
BsrFI RCCGGY 2 cut(s) 341, 1040
BsrI ACTGG 4 cut(s) 490, 2331, 2344, 2650
BssAI RCCGGY 2 cut(s) 341, 1040
BssECI CCNNGG 2 cut(s) 394, 649
BssNI GRCGYC 1 cut(s) 226
BssSI CACGAG 1 cut(s) 1421
BssT1I CCWWGG 1 cut(s) 649
Bst2BI CACGAG 1 cut(s) 1421
Bst2UI CCWGG 3 cut(s) 17, 169, 2653
Bst4CI ACNGT 7 cut(s) 51, 372, 479, 951, 1630, 1996, 2014
Bst6I CTCTTC 6 cut(s) 85, 786, 1027, 1708, 2515, 2523
BstACI GRCGYC 1 cut(s) 226
BstAFI CTTAAG 1 cut(s) 667
BstBAI YACGTR 1 cut(s) 2624
BstC8I GCNNGC 5 cut(s) 123, 263, 1894, 2481, 2485
BstEII GGTNACC 1 cut(s) 1624
BstENI CCTNNNNNAGG 1 cut(s) 2147
BstF5I GGATG 9 cut(s) 156, 348, 708, 881, 1006, 1960, 2305, 2641, 2661
BstHHI GCGC 1 cut(s) 543
BstMAI GTCTC 2 cut(s) 1424, 2290
BstMWI GCNNNNNNNGC 6 cut(s) 131, 162, 225, 342, 1575, 2014
BstNI CCWGG 3 cut(s) 17, 169, 2653
BstPAI GACNNNNGTC 1 cut(s) 1520
BstPI GGTNACC 1 cut(s) 1624
BstSCI CCNGG 4 cut(s) 15, 167, 374, 2651
BstSFI CTRYAG 2 cut(s) 135, 2106
BstSLI GKGCMC 3 cut(s) 1232, 1587, 2010
BstV1I GCAGC 2 cut(s) 366, 2475
BstV2I GAAGAC 3 cut(s) 229, 1479, 1516
BstX2I RGATCY 3 cut(s) 673, 903, 1645
BstXI CCANNNNNNTGG 1 cut(s) 773
BstYI RGATCY 3 cut(s) 673, 903, 1645
BsuRI GGCC 5 cut(s) 77, 633, 1230, 1544, 2350
BtsCI GGATG 9 cut(s) 156, 348, 708, 881, 1006, 1960, 2305, 2641, 2661
BtsI GCAGTG 1 cut(s) 1573
BtsIMutI CAGTG 6 cut(s) 47, 148, 856, 1573, 2001, 2010
BveI ACCTGC 1 cut(s) 2008
Cac8I GCNNGC 5 cut(s) 123, 263, 1894, 2481, 2485
CciI TCATGA 2 cut(s) 193, 636
CfoI GCGC 1 cut(s) 543
Cfr10I RCCGGY 2 cut(s) 341, 1040
Cfr13I GGNCC 5 cut(s) 255, 854, 1228, 1229, 2241
CseI GACGC 1 cut(s) 234
Csp6I GTAC 9 cut(s) 386, 687, 705, 1038, 1302, 1379, 1793, 2472, 2639
CspAI ACCGGT 1 cut(s) 1040
CspCI CAANNNNNGTGG 2 cut(s) 84, 119
CviAII CATG 9 cut(s) 12, 43, 194, 427, 637, 773, 1948, 2155, 2272
CviQI GTAC 9 cut(s) 386, 687, 705, 1038, 1302, 1379, 1793, 2472, 2639
DraI TTTAAA 2 cut(s) 130, 2124
DriI GACNNNNNGTC 1 cut(s) 253
EaeI YGGCCR 1 cut(s) 1542
Eam1104I CTCTTC 6 cut(s) 85, 786, 1027, 1708, 2515, 2523
Eam1105I GACNNNNNGTC 1 cut(s) 253
EarI CTCTTC 6 cut(s) 85, 786, 1027, 1708, 2515, 2523
Ecl136II GAGCTC 1 cut(s) 9
Eco130I CCWWGG 1 cut(s) 649
Eco24I GRGCYC 2 cut(s) 11, 1232
Eco31I GGTCTC 1 cut(s) 2290
Eco47I GGWCC 3 cut(s) 255, 854, 2241
Eco53kI GAGCTC 1 cut(s) 9
Eco57I CTGAAG 1 cut(s) 287
Eco88I CYCGRG 2 cut(s) 229, 395
Eco91I GGTNACC 1 cut(s) 1624
EcoICRI GAGCTC 1 cut(s) 9
EcoNI CCTNNNNNAGG 1 cut(s) 2147
EcoO109I RGGNCCY 1 cut(s) 1229
EcoO65I GGTNACC 1 cut(s) 1624
EcoRI GAATTC 2 cut(s) 1402, 1922
EcoRII CCWGG 3 cut(s) 15, 167, 2651
EcoT14I CCWWGG 1 cut(s) 649
EcoT38I GRGCYC 2 cut(s) 11, 1232
ErhI CCWWGG 1 cut(s) 649
FaeI CATG 9 cut(s) 15, 46, 197, 430, 640, 776, 1951, 2158, 2275
FalI AAGNNNNNCTT 2 cut(s) 2520, 2552
FaqI GGGAC 3 cut(s) 358, 413, 917
FatI CATG 9 cut(s) 11, 42, 193, 426, 636, 772, 1947, 2154, 2271
FauNDI CATATG 1 cut(s) 1669
FbaI TGATCA 2 cut(s) 63, 1759
FblI GTMKAC 1 cut(s) 367
Fnu4HI GCNGC 4 cut(s) 217, 380, 646, 2464
FokI GGATG 8 cut(s) 143, 335, 695, 868, 1013, 1967, 2312, 2648
FriOI GRGCYC 2 cut(s) 11, 1232
Fsp4HI GCNGC 4 cut(s) 217, 380, 646, 2464
FspBI CTAG 8 cut(s) 936, 1821, 1883, 1964, 2144, 2213, 2469, 2550
FspI TGCGCA 1 cut(s) 542
GlaI GCGC 1 cut(s) 542
GluI GCNGC 4 cut(s) 217, 380, 646, 2464
GsuI CTGGAG 1 cut(s) 2348
HaeIII GGCC 5 cut(s) 77, 633, 1230, 1544, 2350
HapII CCGG 5 cut(s) 253, 342, 376, 924, 1041
HgaI GACGC 1 cut(s) 234
HhaI GCGC 1 cut(s) 543
Hin1I GRCGYC 1 cut(s) 226
Hin1II CATG 9 cut(s) 15, 46, 197, 430, 640, 776, 1951, 2158, 2275
Hin6I GCGC 1 cut(s) 541
HinP1I GCGC 1 cut(s) 541
HincII GTYRAC 1 cut(s) 368
HindII GTYRAC 1 cut(s) 368
HindIII AAGCTT 4 cut(s) 521, 664, 815, 1929
HinfI GANTC 7 cut(s) 234, 846, 1094, 1144, 1484, 2029, 2316
HpaII CCGG 5 cut(s) 253, 342, 376, 924, 1041
HphI GGTGA 4 cut(s) 331, 1016, 1138, 1685
Hpy166II GTNNAC 4 cut(s) 368, 854, 1262, 2367
Hpy188I TCNGA 8 cut(s) 90, 293, 326, 1167, 1483, 1492, 1710, 2400
Hpy8I GTNNAC 4 cut(s) 368, 854, 1262, 2367
HpyAV CCTTC 7 cut(s) 262, 321, 582, 795, 1134, 1364, 1811
HpyCH4III ACNGT 7 cut(s) 51, 372, 479, 951, 1630, 1996, 2014
HpyCH4IV ACGT 3 cut(s) 2291, 2416, 2623
HpyCH4V TGCA 8 cut(s) 382, 1978, 2017, 2023, 2086, 2386, 2483, 2575
HpyF10VI GCNNNNNNNGC 6 cut(s) 131, 162, 225, 342, 1575, 2014
HpySE526I ACGT 3 cut(s) 2291, 2416, 2623
Hsp92I GRCGYC 1 cut(s) 226
Hsp92II CATG 9 cut(s) 15, 46, 197, 430, 640, 776, 1951, 2158, 2275
HspAI GCGC 1 cut(s) 541
KpnI GGTACC 1 cut(s) 708
Ksp22I TGATCA 2 cut(s) 63, 1759
LmnI GCTCC 2 cut(s) 170, 1497
Lsp1109I GCAGC 2 cut(s) 366, 2475
LweI GCATC 4 cut(s) 165, 890, 2322, 2646
MaeI CTAG 8 cut(s) 936, 1821, 1883, 1964, 2144, 2213, 2469, 2550
MaeII ACGT 3 cut(s) 2291, 2416, 2623
MaeIII GTNAC 5 cut(s) 45, 1450, 1624, 1885, 2322
MfeI CAATTG 3 cut(s) 498, 1033, 1776
MflI RGATCY 3 cut(s) 673, 903, 1645
MhlI GDGCHC 4 cut(s) 11, 1232, 1587, 2010
MlyI GAGTC 2 cut(s) 243, 1493
MmeI TCCRAC 4 cut(s) 207, 739, 1528, 1932
MroXI GAANNNNTTC 3 cut(s) 335, 586, 845
MslI CAYNNNNRTG 3 cut(s) 71, 752, 1578
MspA1I CMGCKG 1 cut(s) 265
MspCI CTTAAG 1 cut(s) 667
MspI CCGG 5 cut(s) 253, 342, 376, 924, 1041
MspR9I CCNGG 4 cut(s) 17, 169, 376, 2653
MunI CAATTG 3 cut(s) 498, 1033, 1776
Mva1269I GAATGC 1 cut(s) 1161
MvaI CCWGG 3 cut(s) 17, 169, 2653
MwoI GCNNNNNNNGC 6 cut(s) 131, 162, 225, 342, 1575, 2014
NciI CCSGG 1 cut(s) 376
NdeI CATATG 1 cut(s) 1669
NlaIII CATG 9 cut(s) 15, 46, 197, 430, 640, 776, 1951, 2158, 2275
NlaIV GGNNCC 8 cut(s) 346, 706, 1230, 1499, 1865, 2007, 2242, 2650
NmeAIII GCCGAG 1 cut(s) 2154
NmuCI GTSAC 2 cut(s) 45, 1885
NsbI TGCGCA 1 cut(s) 542
OliI CACNNNNGTG 1 cut(s) 1578
PagI TCATGA 2 cut(s) 193, 636
PaqCI CACCTGC 1 cut(s) 2008
PctI GAATGC 1 cut(s) 1161
PdmI GAANNNNTTC 3 cut(s) 335, 586, 845
PfeI GAWTC 5 cut(s) 846, 1094, 1144, 2029, 2316
PflMI CCANNNNNTGG 1 cut(s) 2267
PfoI TCCNGGA 1 cut(s) 167
PinAI ACCGGT 1 cut(s) 1040
PkrI GCNGC 4 cut(s) 218, 381, 647, 2465
PleI GAGTC 2 cut(s) 242, 1492
PpsI GAGTC 2 cut(s) 242, 1492
Ppu21I YACGTR 1 cut(s) 2624
PshAI GACNNNNGTC 1 cut(s) 1520
PshBI ATTAAT 1 cut(s) 1062
PsiI TTATAA 1 cut(s) 1280
Psp124BI GAGCTC 1 cut(s) 11
Psp6I CCWGG 3 cut(s) 15, 167, 2651
PspEI GGTNACC 1 cut(s) 1624
PspGI CCWGG 3 cut(s) 15, 167, 2651
PspN4I GGNNCC 8 cut(s) 346, 706, 1230, 1499, 1865, 2007, 2242, 2650
PspOMI GGGCCC 1 cut(s) 1228
PspPI GGNCC 5 cut(s) 255, 854, 1228, 1229, 2241
PsrI GAACNNNNNNTAC 2 cut(s) 1720, 1752
PsuI RGATCY 3 cut(s) 673, 903, 1645
PvuII CAGCTG 1 cut(s) 265
RsaI GTAC 9 cut(s) 387, 688, 706, 1039, 1303, 1380, 1794, 2473, 2640
RsaNI GTAC 9 cut(s) 386, 687, 705, 1038, 1302, 1379, 1793, 2472, 2639
RseI CAYNNNNRTG 3 cut(s) 71, 752, 1578
SacI GAGCTC 1 cut(s) 11
SalI GTCGAC 1 cut(s) 366
SatI GCNGC 4 cut(s) 217, 380, 646, 2464
Sau96I GGNCC 5 cut(s) 255, 854, 1228, 1229, 2241
ScaI AGTACT 2 cut(s) 387, 1794
SchI GAGTC 2 cut(s) 243, 1493
ScrFI CCNGG 4 cut(s) 17, 169, 376, 2653
SduI GDGCHC 4 cut(s) 11, 1232, 1587, 2010
SfaNI GCATC 4 cut(s) 165, 890, 2322, 2646
SfcI CTRYAG 2 cut(s) 135, 2106
SinI GGWCC 3 cut(s) 255, 854, 2241
SmiMI CAYNNNNRTG 3 cut(s) 71, 752, 1578
SmlI CTYRAG 5 cut(s) 298, 354, 667, 1121, 1897
SmoI CTYRAG 5 cut(s) 298, 354, 667, 1121, 1897
SpeI ACTAGT 2 cut(s) 1882, 2468
SsiI CCGC 5 cut(s) 216, 646, 1412, 1890, 2282
SspI AATATT 2 cut(s) 807, 2050
SspMI CTAG 8 cut(s) 936, 1821, 1883, 1964, 2144, 2213, 2469, 2550
SstI GAGCTC 1 cut(s) 11
StyD4I CCNGG 4 cut(s) 15, 167, 374, 2651
StyI CCWWGG 1 cut(s) 649
TaaI ACNGT 7 cut(s) 51, 372, 479, 951, 1630, 1996, 2014
TaiI ACGT 3 cut(s) 2294, 2419, 2626
TaqI TCGA 3 cut(s) 246, 367, 1209
TatI WGTACW 4 cut(s) 385, 1792, 2471, 2638
TauI GCSGC 2 cut(s) 219, 648
TfiI GAWTC 5 cut(s) 846, 1094, 1144, 2029, 2316
TscAI CASTG 6 cut(s) 54, 148, 856, 1580, 2001, 2017
TseFI GTSAC 2 cut(s) 45, 1885
TseI GCWGC 2 cut(s) 379, 2463
Tsp45I GTSAC 2 cut(s) 45, 1885
TspGWI ACGGA 2 cut(s) 2328, 2427
TspRI CASTG 6 cut(s) 54, 148, 856, 1580, 2001, 2017
Van91I CCANNNNNTGG 1 cut(s) 2267
Vha464I CTTAAG 1 cut(s) 667
VpaK11BI GGWCC 3 cut(s) 255, 854, 2241
VspI ATTAAT 1 cut(s) 1062
XagI CCTNNNNNAGG 1 cut(s) 2147
XapI RAATTY 6 cut(s) 492, 564, 583, 1402, 1711, 1922
XbaI TCTAGA 2 cut(s) 1820, 1963
XcmI CCANNNNNNNNNTGG 1 cut(s) 2590
XmiI GTMKAC 1 cut(s) 367
XmnI GAANNNNTTC 3 cut(s) 335, 586, 845
XspI CTAG 8 cut(s) 936, 1821, 1883, 1964, 2144, 2213, 2469, 2550
ZrmI AGTACT 2 cut(s) 387, 1794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.