MD11G1103300.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
8725873 .. 8728476
2604 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1103300.v1.1.491

Sequence Viewer

Length: 2604 bp
ATGCTTTTCAGTGCAGTGTTCGTTTGCTGTTGGAGCTCCCTGCGATCGGGACTCAGAGGGAATGTGACGGATAGGCTGGCGCTGCTAGCCATCAAAGCTCAAATAAAGCAAGATCTCCATAATTACAATGTGATGAGCTCCTGGAACGAATCCACGCACTTCTGCATGTGGCATGGTGTGACGTGCAATCGACGACATCGCCAAAGGGTCACTAAGCTGGACCTGCAATCTCAAAATCTGGTAGGGAAACTATCCCCAAACGTAGGAAATCTAAGTTTTCTAAAGGAGTTGTGGCTGCGAAATAACAGCTTCAGTCATGAAATTCCTCCACAAATTGGGAATTTGGGTAGGTTGCAGGTATTGCGATTAGACATTAACTCGTTTAGTAGCAGTATTCCACACAATATATCATATTGCTTCAACCTTATCGTTGTGAATTTCACTCGCAACAAGTTGGTGGGTAAAATTCCTTCAGAAATTGGATTGCTGTCGAAGCTTCAAAATTTTATATTAGAAGATAATAATATAACGGGACAGGTCCCTCCTTCCTTGGGGAACCTTTCGTCTCTCCGGGCACTAATTCTCGTTAGTAATAACTTGATGGGAAACATCCCCAGTTCTCTTGGCCAATTGAAAAAATTAACCTTCTTGAGATTGGGGTTAAATCAGTTGTCTGGTAGCATCCCTTCCTCCATTTATAACCTCTCTTCTCTTGTTACATTTTCCATGACAAATAACCAAATTCAAGGGAGTATTCCATCAGATATTGGCAAAAGTCTTCTTAATCTCGAAATATTCAACTTCGGCATCAACCAACTTACTGGGTCCATACCTCCCTCAATAATCAACGTCACAAGTGTTTGGTTTTTTGACGTTGGGAGTAGCAACCTAATCGGACGGGTACCGAATCTCCAAAAGCTTCACAACCTCCAGGTTTTCAACATTCAATATAATAATATTGGAAGCGGTAAAGATGGTGACTTAAGTTTTCTCTCGGACTTGACCAATGCCACCCGGTTACAATTTTTGATTATTAACACCAACAATTTTGGAGGGACATTGCCCATGTCAATATCCAATCTCTCAACCAAACTTGAAATTTTTGCAGTTGACACTAACCAAATATATGGAAGCATCCCATCTGGGATAGGGAATCTGGTGAGCTTGGAATGGTTGTCTTTGGGGAATAATAGCTTCACAGGAAACATCCCCTCTGACATGGGTAAGCTTTCAAACCTTGGATTATTAAAGATTTACAAGACCAAATTATCAGGAAATATTCCGTCTTCCTTCAGAAATTTAACCAAGTTATACCATCTTTCGTTGGTTGGAAATTATCTTGAGGGCAGCATTCCTTCAGGTCTGGGGGAATGCCATGGGTTGCAATTGTTGTATCTTTCTTATAACCTCCTAAATGGCACAATACCCAAACAAGTTTTTAGACTCTCCTCCTTAACGATTTCTTTGGACTTGTCTAATAACCTCTTCACAGGTTCCCTTCCCCCGGAGGTTGGGAATTTCCATAGTCTAAGTGAACTGGATCTTTCTGATAACATGTTATCTGGAGAACTTCCCAGTAGCCTTGGTGGTTGTGAGAGTTTAGAAGTCCTGCATTTGCAAGGAAACTTCTTCAACGGGTCCATTCCTTTGTCTATGAGTTCAGTGAGAGGGATTCGAGATATAGACCTTTCTCGCAATAATTTTTCAGGGGAAATTCCACATTTTTTAGAAGGCTTTAGAATCCTGAATATTCTGAACTTATCATTCAATCAATTTTGGGGAGTGGTACCAACTGGAGGTGTTTTCAAAAATGCGAGTGCTATTTCAGTCATTGGCAACACAAATTTGTGCAGTCTTGTTGCTAATTTAAAGCTTCCCAAGTGCAAGTCTAAAGAGACCAAGAAACGAAGATTGTCTCGTAGCTTGAAACTAATACTCCCTTTAGTATTTGGGCTTACTCTTCTAGGAATAGCCATGGTGTTCTCCTATTTCTTTCTTTGTTCATCAAGGAAGAAAAGGAAAGAAATTTCATTGAGCACTTTGGGGGACACTATTTTGCAAGTGTCATATGCTACTCTACTCAAAGCTACTGATGGGTTCTCAGAGGCTAATTTAATTGGTGTTGGTAGTTTTGGGTCTGTGTACAAGGGAGTTCTTGATGATGATGATAAAGCTCAACTTGTTGCCGTGAAGGTGTTTAACTTGTTACGCCTTGGAGCTTCGAAGAGTTTCATAGCCGAATGTGAAGCTTTGAGAAATATTAGGCATCGAAATCTCGTCAAGATTATAATTGTCTGTTCAAGTGTTGATTTTAATGGTAATGATGTCAAGGCTCTAGTTTATGAGTTCGTGGACAACGGGAGCTTAGAGGAGTGGCTGCATCCACCTACTGGAACTGAAGAGTTAGGAGATCATGTACCCAAGAATTTAAGTCTTCTTCAGAGGCTAGAAATTGCCATTGGTGTTGCTTGTGCACTAGATTATCTTCATAATCATTGTGAAACGCCAATAGTTCATTGTGATCTCAAACCAAGCAACGTTCTCTTAGACAAAGAATTGACTGGCCATGTTTCTGACTTTGGATTAGCAAGGTTTCTCTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

868

Amino Acids

95.18

Weight (kDa)

8.91

Isoelectric Point (pI)

34.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 23 - 63 2e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 207 - 351 2.4e-06 Leucine-rich repeat region
LRR_14 PF23598 382 - 467 7.9e-08 Leucine-rich repeat region
Pkinase PF00069 702 - 866 1.9e-24 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 704 - 866 1.4e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 699, 1404, 2288
Acc36I ACCTGC 2 cut(s) 231, 346
Acc65I GGTACC 2 cut(s) 901, 1786
AccB1I GGYRCC 2 cut(s) 901, 1786
AccB7I CCANNNNNTGG 2 cut(s) 335, 2390
AciI CCGC 1 cut(s) 966
AclI AACGTT 1 cut(s) 2538
AclWI GGATC 1 cut(s) 1548
AcoI YGGCCR 2 cut(s) 625, 2563
AcuI CTGAAG 6 cut(s) 295, 456, 1276, 1341, 2418, 2423
AfaI GTAC 4 cut(s) 903, 1788, 2144, 2418
AfiI CCNNNNNNNGG 8 cut(s) 46, 263, 335, 551, 1504, 1511, 1796, 2390
AflII CTTAAG 1 cut(s) 982
AflIII ACRYGT 1 cut(s) 1554
AjiI CACGTC 1 cut(s) 183
AjnI CCWGG 2 cut(s) 140, 930
AjuI GAANNNNNNNTTGG 2 cut(s) 2442, 2474
Alw21I GWGCWC 4 cut(s) 38, 140, 2039, 2476
Alw26I GTCTC 3 cut(s) 570, 1889, 1920
Alw44I GTGCAC 1 cut(s) 2472
AlwI GGATC 1 cut(s) 1548
AoxI GGCC 2 cut(s) 625, 2563
ApaLI GTGCAC 1 cut(s) 2472
ApeKI GCWGC 4 cut(s) 82, 295, 1347, 2377
Asp700I GAANNNNTTC 1 cut(s) 2228
Asp718I GGTACC 2 cut(s) 901, 1786
AspLEI GCGC 1 cut(s) 82
AspS9I GGNCC 4 cut(s) 220, 538, 825, 1638
AsuC2I CCSGG 3 cut(s) 572, 1015, 1505
AsuHPI GGTGA 2 cut(s) 989, 1171
AsuII TTCGAA 1 cut(s) 2222
AsuNHI GCTAGC 1 cut(s) 85
AvaII GGWCC 4 cut(s) 220, 538, 825, 1638
BaeGI GKGCMC 2 cut(s) 577, 2476
BalI TGGCCA 2 cut(s) 627, 2565
BanI GGYRCC 2 cut(s) 901, 1786
BanII GRGCYC 2 cut(s) 38, 140
BarI GAAGNNNNNNTAC 4 cut(s) 454, 486, 670, 702
BbsI GAAGAC 3 cut(s) 770, 1278, 2426
Bbv12I GWGCWC 4 cut(s) 38, 140, 2039, 2476
BbvI GCAGC 4 cut(s) 69, 282, 1359, 2364
BccI CCATC 7 cut(s) 98, 595, 766, 968, 1147, 1323, 2087
BceAI ACGGC 1 cut(s) 2171
BcgI CGANNNNNNTGC 2 cut(s) 874, 908
BciT130I CCWGG 2 cut(s) 142, 932
BcnI CCSGG 3 cut(s) 572, 1015, 1505
BcoDI GTCTC 3 cut(s) 570, 1889, 1920
BfaI CTAG 5 cut(s) 86, 1964, 2336, 2447, 2477
BfoI RGCGCY 1 cut(s) 83
BfrI CTTAAG 1 cut(s) 982
BfuAI ACCTGC 2 cut(s) 231, 346
BglII AGATCT 1 cut(s) 112
BisI GCNGC 4 cut(s) 83, 296, 1348, 2378
BlsI GCNGC 4 cut(s) 84, 297, 1349, 2379
Bme1390I CCNGG 5 cut(s) 142, 572, 932, 1015, 1505
Bme18I GGWCC 4 cut(s) 220, 538, 825, 1638
BmgBI CACGTC 1 cut(s) 183
BmgT120I GGNCC 4 cut(s) 220, 538, 825, 1638
BmiI GGNNCC 7 cut(s) 540, 557, 826, 903, 1495, 1639, 1788
BmrFI CCNGG 5 cut(s) 142, 572, 932, 1015, 1505
BmrI ACTGGG 3 cut(s) 609, 831, 1569
BmsI GCATC 5 cut(s) 690, 816, 1143, 2275, 2389
BmtI GCTAGC 1 cut(s) 89
BmuI ACTGGG 3 cut(s) 609, 831, 1569
BpiI GAAGAC 3 cut(s) 770, 1278, 2426
BpmI CTGGAG 3 cut(s) 914, 1584, 1815
Bpu14I TTCGAA 1 cut(s) 2222
BpuEI CTTGAG 2 cut(s) 670, 1361
BpuMI CCSGG 3 cut(s) 572, 1015, 1505
BsaI GGTCTC 1 cut(s) 1889
BsaJI CCNNGG 7 cut(s) 549, 1237, 1375, 1503, 1582, 1974, 2212
BsaXI ACNNNNNCTCC 6 cut(s) 894, 924, 1920, 1950, 2400, 2430
Bsc4I CCNNNNNNNGG 8 cut(s) 46, 263, 335, 551, 1504, 1511, 1796, 2390
Bse1I ACTGG 7 cut(s) 615, 826, 1542, 1575, 1798, 2395, 2566
Bse3DI GCAATG 1 cut(s) 1058
BseBI CCWGG 2 cut(s) 142, 932
BseDI CCNNGG 7 cut(s) 549, 1237, 1375, 1503, 1582, 1974, 2212
BseGI GGATG 5 cut(s) 609, 681, 1134, 1206, 2380
BseLI CCNNNNNNNGG 8 cut(s) 46, 263, 335, 551, 1504, 1511, 1796, 2390
BseMI GCAATG 1 cut(s) 1058
BseMII CTCAG 2 cut(s) 67, 2115
BseNI ACTGG 7 cut(s) 615, 826, 1542, 1575, 1798, 2395, 2566
BseRI GAGGAG 2 cut(s) 1438, 2384
BseSI GKGCMC 2 cut(s) 577, 2476
BseXI GCAGC 4 cut(s) 69, 282, 1359, 2364
BsgI GTGCAG 2 cut(s) 33, 1870
Bsh1285I CGRYCG 1 cut(s) 47
BshFI GGCC 2 cut(s) 627, 2565
BshNI GGYRCC 2 cut(s) 901, 1786
BsiEI CGRYCG 1 cut(s) 47
BsiHKAI GWGCWC 4 cut(s) 38, 140, 2039, 2476
BsiSI CCGG 3 cut(s) 571, 1015, 1505
BslFI GGGAC 5 cut(s) 63, 524, 546, 1069, 2060
BslI CCNNNNNNNGG 8 cut(s) 46, 263, 335, 551, 1504, 1511, 1796, 2390
BsmAI GTCTC 3 cut(s) 570, 1889, 1920
BsmBI CGTCTC 1 cut(s) 570
BsmFI GGGAC 5 cut(s) 63, 524, 546, 1069, 2060
BsmI GAATGC 2 cut(s) 1350, 1376
BsnI GGCC 2 cut(s) 627, 2565
Bso31I GGTCTC 1 cut(s) 1889
Bsp119I TTCGAA 1 cut(s) 2222
Bsp1286I GDGCHC 5 cut(s) 38, 140, 577, 2039, 2476
Bsp1407I TGTACA 1 cut(s) 2142
Bsp143I GATC 5 cut(s) 44, 112, 1540, 2410, 2521
Bsp19I CCATGG 2 cut(s) 1375, 1974
BspACI CCGC 1 cut(s) 966
BspANI GGCC 2 cut(s) 627, 2565
BspCNI CTCAG 2 cut(s) 66, 2114
BspHI TCATGA 1 cut(s) 316
BspLI GGNNCC 7 cut(s) 540, 557, 826, 903, 1495, 1639, 1788
BspMI ACCTGC 2 cut(s) 231, 346
BspOI GCTAGC 1 cut(s) 89
BspPI GGATC 1 cut(s) 1548
BspT104I TTCGAA 1 cut(s) 2222
BspT107I GGYRCC 2 cut(s) 901, 1786
BspTI CTTAAG 1 cut(s) 982
BspTNI GGTCTC 1 cut(s) 1889
BsrDI GCAATG 1 cut(s) 1058
BsrGI TGTACA 1 cut(s) 2142
BsrI ACTGG 7 cut(s) 615, 826, 1542, 1575, 1798, 2395, 2566
BssECI CCNNGG 7 cut(s) 549, 1237, 1375, 1503, 1582, 1974, 2212
BssMI GATC 5 cut(s) 44, 112, 1540, 2410, 2521
BssT1I CCWWGG 6 cut(s) 549, 1237, 1375, 1582, 1974, 2212
Bst2UI CCWGG 2 cut(s) 142, 932
Bst6I CTCTTC 5 cut(s) 712, 1490, 1965, 2219, 2394
BstAFI CTTAAG 1 cut(s) 982
BstAPI GCANNNNNTGC 1 cut(s) 361
BstAUI TGTACA 1 cut(s) 2142
BstBI TTCGAA 1 cut(s) 2222
BstC8I GCNNGC 2 cut(s) 78, 87
BstDEI CTNAG 7 cut(s) 53, 213, 272, 1529, 2101, 2365, 2545
BstDSI CCRYGG 2 cut(s) 1375, 1974
BstF5I GGATG 5 cut(s) 609, 681, 1134, 1206, 2380
BstH2I RGCGCY 1 cut(s) 83
BstHHI GCGC 1 cut(s) 82
BstKTI GATC 5 cut(s) 47, 115, 1543, 2413, 2524
BstMAI GTCTC 3 cut(s) 570, 1889, 1920
BstMBI GATC 5 cut(s) 44, 112, 1540, 2410, 2521
BstMCI CGRYCG 1 cut(s) 47
BstMWI GCNNNNNNNGC 7 cut(s) 33, 82, 86, 95, 223, 361, 493
BstNI CCWGG 2 cut(s) 142, 932
BstNSI RCATGY 2 cut(s) 169, 1558
BstSCI CCNGG 5 cut(s) 140, 570, 930, 1013, 1503
BstSLI GKGCMC 2 cut(s) 577, 2476
BstV1I GCAGC 4 cut(s) 69, 282, 1359, 2364
BstV2I GAAGAC 3 cut(s) 770, 1278, 2426
BstX2I RGATCY 2 cut(s) 112, 1540
BstXI CCANNNNNNTGG 2 cut(s) 821, 1127
BstYI RGATCY 2 cut(s) 112, 1540
BsuRI GGCC 2 cut(s) 627, 2565
BtgI CCRYGG 2 cut(s) 1375, 1974
BtgZI GCGATG 1 cut(s) 182
BtrI CACGTC 1 cut(s) 183
BtsCI GGATG 5 cut(s) 609, 681, 1134, 1206, 2380
BtsI GCAGTG 1 cut(s) 21
BtsIMutI CAGTG 3 cut(s) 16, 21, 1668
BveI ACCTGC 2 cut(s) 231, 346
Cac8I GCNNGC 2 cut(s) 78, 87
CciI TCATGA 1 cut(s) 316
CfoI GCGC 1 cut(s) 82
Cfr13I GGNCC 4 cut(s) 220, 538, 825, 1638
Csp6I GTAC 4 cut(s) 902, 1787, 2143, 2417
CviQI GTAC 4 cut(s) 902, 1787, 2143, 2417
DdeI CTNAG 7 cut(s) 53, 213, 272, 1529, 2101, 2365, 2545
DpnI GATC 5 cut(s) 46, 114, 1542, 2412, 2523
DpnII GATC 5 cut(s) 44, 112, 1540, 2410, 2521
DraI TTTAAA 1 cut(s) 1869
EaeI YGGCCR 2 cut(s) 625, 2563
Eam1104I CTCTTC 5 cut(s) 712, 1490, 1965, 2219, 2394
EarI CTCTTC 5 cut(s) 712, 1490, 1965, 2219, 2394
Ecl136II GAGCTC 2 cut(s) 36, 138
Eco130I CCWWGG 6 cut(s) 549, 1237, 1375, 1582, 1974, 2212
Eco24I GRGCYC 2 cut(s) 38, 140
Eco31I GGTCTC 1 cut(s) 1889
Eco47I GGWCC 4 cut(s) 220, 538, 825, 1638
Eco53kI GAGCTC 2 cut(s) 36, 138
Eco57I CTGAAG 6 cut(s) 295, 456, 1276, 1341, 2418, 2423
EcoICRI GAGCTC 2 cut(s) 36, 138
EcoO109I RGGNCCY 1 cut(s) 538
EcoRII CCWGG 2 cut(s) 140, 930
EcoT14I CCWWGG 6 cut(s) 549, 1237, 1375, 1582, 1974, 2212
EcoT38I GRGCYC 2 cut(s) 38, 140
ErhI CCWWGG 6 cut(s) 549, 1237, 1375, 1582, 1974, 2212
Esp3I CGTCTC 1 cut(s) 570
FalI AAGNNNNNCTT 2 cut(s) 2163, 2195
FaqI GGGAC 5 cut(s) 63, 524, 546, 1069, 2060
FauNDI CATATG 1 cut(s) 2068
Fnu4HI GCNGC 4 cut(s) 83, 296, 1348, 2378
FokI GGATG 5 cut(s) 596, 668, 1121, 1193, 2367
FriOI GRGCYC 2 cut(s) 38, 140
Fsp4HI GCNGC 4 cut(s) 83, 296, 1348, 2378
FspBI CTAG 5 cut(s) 86, 1964, 2336, 2447, 2477
GlaI GCGC 1 cut(s) 81
GluI GCNGC 4 cut(s) 83, 296, 1348, 2378
GsuI CTGGAG 3 cut(s) 914, 1584, 1815
HaeII RGCGCY 1 cut(s) 83
HaeIII GGCC 2 cut(s) 627, 2565
HapII CCGG 3 cut(s) 571, 1015, 1505
HhaI GCGC 1 cut(s) 82
Hin6I GCGC 1 cut(s) 80
HinP1I GCGC 1 cut(s) 80
HincII GTYRAC 1 cut(s) 1111
HindII GTYRAC 1 cut(s) 1111
HindIII AAGCTT 5 cut(s) 494, 917, 1226, 1871, 2247
HinfI GANTC 7 cut(s) 51, 149, 907, 1153, 1443, 1672, 1740
HpaII CCGG 3 cut(s) 571, 1015, 1505
HphI GGTGA 2 cut(s) 989, 1171
Hpy166II GTNNAC 5 cut(s) 1111, 1535, 2143, 2353, 2474
Hpy8I GTNNAC 5 cut(s) 1111, 1535, 2143, 2353, 2474
Hpy99I CGWCG 1 cut(s) 195
HpyAV CCTTC 9 cut(s) 480, 555, 655, 696, 1300, 1365, 1508, 1724, 2185
HpyCH4IV ACGT 5 cut(s) 182, 261, 849, 873, 2538
HpyF10VI GCNNNNNNNGC 7 cut(s) 33, 82, 86, 95, 223, 361, 493
HpyF3I CTNAG 7 cut(s) 53, 213, 272, 1529, 2101, 2365, 2545
HpySE526I ACGT 5 cut(s) 182, 261, 849, 873, 2538
HspAI GCGC 1 cut(s) 80
KpnI GGTACC 2 cut(s) 905, 1790
Kzo9I GATC 5 cut(s) 44, 112, 1540, 2410, 2521
LmnI GCTCC 5 cut(s) 33, 41, 143, 2216, 2361
Lsp1109I GCAGC 4 cut(s) 69, 282, 1359, 2364
LweI GCATC 5 cut(s) 690, 816, 1143, 2275, 2389
MaeI CTAG 5 cut(s) 86, 1964, 2336, 2447, 2477
MaeII ACGT 5 cut(s) 182, 261, 849, 873, 2538
MaeIII GTNAC 8 cut(s) 64, 178, 208, 715, 850, 977, 1017, 2205
MalI GATC 5 cut(s) 46, 114, 1542, 2412, 2523
MboI GATC 5 cut(s) 44, 112, 1540, 2410, 2521
MfeI CAATTG 2 cut(s) 629, 1385
MflI RGATCY 2 cut(s) 112, 1540
MhlI GDGCHC 5 cut(s) 38, 140, 577, 2039, 2476
MlsI TGGCCA 2 cut(s) 627, 2565
MluNI TGGCCA 2 cut(s) 627, 2565
MlyI GAGTC 2 cut(s) 45, 1437
MmeI TCCRAC 2 cut(s) 11, 1309
Mox20I TGGCCA 2 cut(s) 627, 2565
MroXI GAANNNNTTC 1 cut(s) 2228
MscI TGGCCA 2 cut(s) 627, 2565
Msp20I TGGCCA 2 cut(s) 627, 2565
MspCI CTTAAG 1 cut(s) 982
MspI CCGG 3 cut(s) 571, 1015, 1505
MspR9I CCNGG 5 cut(s) 142, 572, 932, 1015, 1505
MunI CAATTG 2 cut(s) 629, 1385
Mva1269I GAATGC 2 cut(s) 1350, 1376
MvaI CCWGG 2 cut(s) 142, 932
MwoI GCNNNNNNNGC 7 cut(s) 33, 82, 86, 95, 223, 361, 493
NciI CCSGG 3 cut(s) 572, 1015, 1505
NcoI CCATGG 2 cut(s) 1375, 1974
NdeI CATATG 1 cut(s) 2068
NdeII GATC 5 cut(s) 44, 112, 1540, 2410, 2521
NheI GCTAGC 1 cut(s) 85
NlaIV GGNNCC 7 cut(s) 540, 557, 826, 903, 1495, 1639, 1788
NmuCI GTSAC 5 cut(s) 64, 178, 208, 850, 977
NspI RCATGY 2 cut(s) 169, 1558
NspV TTCGAA 1 cut(s) 2222
PagI TCATGA 1 cut(s) 316
PciI ACATGT 1 cut(s) 1554
PctI GAATGC 2 cut(s) 1350, 1376
PdmI GAANNNNTTC 1 cut(s) 2228
PfeI GAWTC 5 cut(s) 149, 907, 1153, 1672, 1740
PflMI CCANNNNNTGG 2 cut(s) 335, 2390
PfoI TCCNGGA 1 cut(s) 140
PkrI GCNGC 4 cut(s) 84, 297, 1349, 2379
Ple19I CGATCG 1 cut(s) 47
PleI GAGTC 2 cut(s) 45, 1437
PpsI GAGTC 2 cut(s) 45, 1437
PpuMI RGGWCCY 1 cut(s) 538
PscI ACATGT 1 cut(s) 1554
PsiI TTATAA 3 cut(s) 699, 1404, 2288
Psp124BI GAGCTC 2 cut(s) 38, 140
Psp1406I AACGTT 1 cut(s) 2538
Psp5II RGGWCCY 1 cut(s) 538
Psp6I CCWGG 2 cut(s) 140, 930
PspGI CCWGG 2 cut(s) 140, 930
PspN4I GGNNCC 7 cut(s) 540, 557, 826, 903, 1495, 1639, 1788
PspPI GGNCC 4 cut(s) 220, 538, 825, 1638
PspPPI RGGWCCY 1 cut(s) 538
PsuI RGATCY 2 cut(s) 112, 1540
PvuI CGATCG 1 cut(s) 47
RsaI GTAC 4 cut(s) 903, 1788, 2144, 2418
RsaNI GTAC 4 cut(s) 902, 1787, 2143, 2417
SacI GAGCTC 2 cut(s) 38, 140
SatI GCNGC 4 cut(s) 83, 296, 1348, 2378
Sau3AI GATC 5 cut(s) 44, 112, 1540, 2410, 2521
Sau96I GGNCC 4 cut(s) 220, 538, 825, 1638
SchI GAGTC 2 cut(s) 45, 1437
ScrFI CCNGG 5 cut(s) 142, 572, 932, 1015, 1505
SduI GDGCHC 5 cut(s) 38, 140, 577, 2039, 2476
SfaNI GCATC 5 cut(s) 690, 816, 1143, 2275, 2389
SfuI TTCGAA 1 cut(s) 2222
SinI GGWCC 4 cut(s) 220, 538, 825, 1638
SmlI CTYRAG 3 cut(s) 649, 982, 1340
SmoI CTYRAG 3 cut(s) 649, 982, 1340
SsiI CCGC 1 cut(s) 966
SspI AATATT 5 cut(s) 795, 958, 1279, 1750, 2260
SspMI CTAG 5 cut(s) 86, 1964, 2336, 2447, 2477
SstI GAGCTC 2 cut(s) 38, 140
StyD4I CCNGG 5 cut(s) 140, 570, 930, 1013, 1503
StyI CCWWGG 6 cut(s) 549, 1237, 1375, 1582, 1974, 2212
TaiI ACGT 5 cut(s) 185, 264, 852, 876, 2541
TaqI TCGA 6 cut(s) 190, 491, 789, 1675, 2222, 2269
TatI WGTACW 1 cut(s) 2142
TfiI GAWTC 5 cut(s) 149, 907, 1153, 1672, 1740
TscAI CASTG 3 cut(s) 16, 21, 1668
TseFI GTSAC 5 cut(s) 64, 178, 208, 850, 977
TseI GCWGC 4 cut(s) 82, 295, 1347, 2377
Tsp45I GTSAC 5 cut(s) 64, 178, 208, 850, 977
TspDTI ATGAA 6 cut(s) 333, 1992, 2019, 2221, 2477, 2504
TspGWI ACGGA 2 cut(s) 83, 1272
TspRI CASTG 3 cut(s) 16, 21, 1668
Van91I CCANNNNNTGG 2 cut(s) 335, 2390
Vha464I CTTAAG 1 cut(s) 982
VneI GTGCAC 1 cut(s) 2472
VpaK11BI GGWCC 4 cut(s) 220, 538, 825, 1638
XceI RCATGY 2 cut(s) 169, 1558
XmnI GAANNNNTTC 1 cut(s) 2228
XspI CTAG 5 cut(s) 86, 1964, 2336, 2447, 2477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.