MD11G1106200.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
9406534 .. 9407253
720 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1106200.v1.1.491

Sequence Viewer

Length: 720 bp
ATGCCATTTAACCAAATTCAAGGAAGTATTCCATCAGATATTGGCAGAAGTCTTCCTAATCTCGAAATCTTCAACTTCGGCAGCAACCAACTCACTGGGTCCATACCTCCCTCAATATTCAACGTCACTAGTGTTTGGTTATTTGAAGTTGAGGGTAACAACCTAATCGGACAGGTGCCGAATCTCCAAAAGCTTCACAACCTCCTGTATTTCAACATTCAATTTAATAATATTGGAAGCGGTAAAGATGGTGACTTATGTTTTCTCTCGGACTTGACCAATGCCACGCAGTTAAAAGACTTGGTGATTAACAGCAACAATTTTGGAGGGACATTGCCTATGTCAGTATGCAATCTCTCAACCAAACTTGAATTGTTTTGGGTTGGCGGTAACCAAATATATGGAAGCATCCCATCTGGGATAGGGAATCTGGTGAGCTTGCAATCGTTGTATTTGGGGAATAATAGCTTCACAGGTAACATCCCCTCTGACATGGGTAAGCTTTCAAAACCTTGGAAGATTAGATATTTTCATGACCAAATTATCCGGAAATATTTTCCGTCTTCCTTAGGAAATTTAACCAGGTTATACTATCTTGGGTTGGATGGAAATTATCTTGAGGGCAGCATTCCTTCAGGTCTGGGTGAATGCCATGGGTTGCAAGCGTTGAATCTTTCTTATAACCTTCTTAACGGCACAATACCCAAACAAGTTTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

240

Amino Acids

26.26

Weight (kDa)

6.27

Isoelectric Point (pI)

30.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 681
AccB1I GGYRCC 1 cut(s) 175
AccIII TCCGGA 1 cut(s) 546
AciI CCGC 2 cut(s) 240, 387
AcsI RAATTY 2 cut(s) 15, 574
AcuI CTGAAG 1 cut(s) 618
AgsI TTSAA 9 cut(s) 20, 73, 121, 146, 214, 221, 371, 507, 670
AhlI ACTAGT 1 cut(s) 128
AjnI CCWGG 1 cut(s) 581
AluBI AGCT 4 cut(s) 193, 438, 468, 502
AluI AGCT 4 cut(s) 193, 438, 468, 502
Aor13HI TCCGGA 1 cut(s) 546
ApeKI GCWGC 2 cut(s) 81, 624
ApoI RAATTY 2 cut(s) 15, 574
AspS9I GGNCC 1 cut(s) 99
AsuHPI GGTGA 4 cut(s) 263, 316, 445, 656
AvaII GGWCC 1 cut(s) 99
AxyI CCTNAGG 1 cut(s) 568
BanI GGYRCC 1 cut(s) 175
BbsI GAAGAC 2 cut(s) 44, 555
BbvI GCAGC 2 cut(s) 93, 636
BccI CCATC 4 cut(s) 40, 242, 421, 599
BceAI ACGGC 1 cut(s) 709
BciT130I CCWGG 1 cut(s) 583
BcuI ACTAGT 1 cut(s) 128
BfaI CTAG 1 cut(s) 129
BisI GCNGC 2 cut(s) 82, 625
BlsI GCNGC 2 cut(s) 83, 626
Bme1390I CCNGG 1 cut(s) 583
Bme18I GGWCC 1 cut(s) 99
BmgT120I GGNCC 1 cut(s) 99
BmiI GGNNCC 2 cut(s) 100, 177
BmrFI CCNGG 1 cut(s) 583
BmrI ACTGGG 1 cut(s) 105
BmsI GCATC 1 cut(s) 417
BmuI ACTGGG 1 cut(s) 105
BpiI GAAGAC 2 cut(s) 44, 555
BpuEI CTTGAG 1 cut(s) 638
BsaJI CCNNGG 2 cut(s) 512, 652
BsaWI WCCGGW 1 cut(s) 546
Bse1I ACTGG 1 cut(s) 100
Bse21I CCTNAGG 1 cut(s) 568
Bse3DI GCAATG 1 cut(s) 332
BseAI TCCGGA 1 cut(s) 546
BseBI CCWGG 1 cut(s) 583
BseDI CCNNGG 2 cut(s) 512, 652
BseGI GGATG 3 cut(s) 408, 480, 610
BseMI GCAATG 1 cut(s) 332
BseNI ACTGG 1 cut(s) 100
BseXI GCAGC 2 cut(s) 93, 636
BshNI GGYRCC 1 cut(s) 175
BsiSI CCGG 1 cut(s) 547
BslFI GGGAC 1 cut(s) 343
BsmFI GGGAC 1 cut(s) 343
BsmI GAATGC 2 cut(s) 627, 653
Bsp13I TCCGGA 1 cut(s) 546
Bsp19I CCATGG 1 cut(s) 652
BspACI CCGC 2 cut(s) 240, 387
BspEI TCCGGA 1 cut(s) 546
BspHI TCATGA 1 cut(s) 532
BspLI GGNNCC 2 cut(s) 100, 177
BspT107I GGYRCC 1 cut(s) 175
BsrDI GCAATG 1 cut(s) 332
BsrI ACTGG 1 cut(s) 100
BssECI CCNNGG 2 cut(s) 512, 652
BssT1I CCWWGG 2 cut(s) 512, 652
Bst2UI CCWGG 1 cut(s) 583
BstC8I GCNNGC 2 cut(s) 440, 663
BstDEI CTNAG 1 cut(s) 568
BstDSI CCRYGG 1 cut(s) 652
BstEII GGTNACC 1 cut(s) 389
BstF5I GGATG 3 cut(s) 408, 480, 610
BstNI CCWGG 1 cut(s) 583
BstPI GGTNACC 1 cut(s) 389
BstSCI CCNGG 1 cut(s) 581
BstV1I GCAGC 2 cut(s) 93, 636
BstV2I GAAGAC 2 cut(s) 44, 555
BstXI CCANNNNNNTGG 2 cut(s) 95, 401
Bsu36I CCTNAGG 1 cut(s) 568
BtgI CCRYGG 1 cut(s) 652
BtsCI GGATG 3 cut(s) 408, 480, 610
BtsIMutI CAGTG 1 cut(s) 93
Cac8I GCNNGC 2 cut(s) 440, 663
CciI TCATGA 1 cut(s) 532
Cfr13I GGNCC 1 cut(s) 99
CsiI ACCWGGT 1 cut(s) 581
CviAII CATG 3 cut(s) 493, 533, 653
CviJI RGCY 4 cut(s) 193, 438, 468, 502
CviKI_1 RGCY 4 cut(s) 193, 438, 468, 502
DdeI CTNAG 1 cut(s) 568
Eco130I CCWWGG 2 cut(s) 512, 652
Eco47I GGWCC 1 cut(s) 99
Eco57I CTGAAG 1 cut(s) 618
Eco81I CCTNAGG 1 cut(s) 568
Eco91I GGTNACC 1 cut(s) 389
EcoO65I GGTNACC 1 cut(s) 389
EcoRII CCWGG 1 cut(s) 581
EcoT14I CCWWGG 2 cut(s) 512, 652
ErhI CCWWGG 2 cut(s) 512, 652
FaeI CATG 3 cut(s) 496, 536, 656
FaqI GGGAC 1 cut(s) 343
FatI CATG 3 cut(s) 492, 532, 652
Fnu4HI GCNGC 2 cut(s) 82, 625
FokI GGATG 3 cut(s) 395, 467, 617
Fsp4HI GCNGC 2 cut(s) 82, 625
FspBI CTAG 1 cut(s) 129
GluI GCNGC 2 cut(s) 82, 625
HapII CCGG 1 cut(s) 547
Hin1II CATG 3 cut(s) 496, 536, 656
HindIII AAGCTT 2 cut(s) 191, 500
HinfI GANTC 3 cut(s) 181, 427, 670
HpaII CCGG 1 cut(s) 547
HphI GGTGA 4 cut(s) 263, 316, 445, 656
Hpy188I TCNGA 4 cut(s) 37, 170, 271, 490
Hpy188III TCNNGA 4 cut(s) 62, 533, 547, 617
HpyAV CCTTC 2 cut(s) 642, 695
HpyCH4IV ACGT 1 cut(s) 123
HpyCH4V TGCA 3 cut(s) 351, 442, 661
HpyF3I CTNAG 1 cut(s) 568
HpySE526I ACGT 1 cut(s) 123
Hsp92II CATG 3 cut(s) 496, 536, 656
Kpn2I TCCGGA 1 cut(s) 546
Lsp1109I GCAGC 2 cut(s) 93, 636
LweI GCATC 1 cut(s) 417
MabI ACCWGGT 1 cut(s) 581
MaeI CTAG 1 cut(s) 129
MaeII ACGT 1 cut(s) 123
MaeIII GTNAC 5 cut(s) 124, 155, 251, 389, 476
MboII GAAGA 4 cut(s) 44, 61, 529, 555
MluCI AATT 7 cut(s) 15, 221, 319, 371, 540, 574, 610
MmeI TCCRAC 1 cut(s) 582
MnlI CCTC 7 cut(s) 117, 121, 145, 212, 320, 496, 613
MroI TCCGGA 1 cut(s) 546
MseI TTAA 6 cut(s) 9, 225, 293, 309, 578, 690
MspI CCGG 1 cut(s) 547
MspR9I CCNGG 1 cut(s) 583
Mva1269I GAATGC 2 cut(s) 627, 653
MvaI CCWGG 1 cut(s) 583
NcoI CCATGG 1 cut(s) 652
NlaIII CATG 3 cut(s) 496, 536, 656
NlaIV GGNNCC 2 cut(s) 100, 177
NmuCI GTSAC 2 cut(s) 124, 251
PagI TCATGA 1 cut(s) 532
PctI GAATGC 2 cut(s) 627, 653
PfeI GAWTC 3 cut(s) 181, 427, 670
PkrI GCNGC 2 cut(s) 83, 626
PsiI TTATAA 1 cut(s) 681
Psp6I CCWGG 1 cut(s) 581
PspEI GGTNACC 1 cut(s) 389
PspGI CCWGG 1 cut(s) 581
PspN4I GGNNCC 2 cut(s) 100, 177
PspPI GGNCC 1 cut(s) 99
SaqAI TTAA 6 cut(s) 9, 225, 293, 309, 578, 690
SatI GCNGC 2 cut(s) 82, 625
Sau96I GGNCC 1 cut(s) 99
ScrFI CCNGG 1 cut(s) 583
SexAI ACCWGGT 1 cut(s) 581
SfaNI GCATC 1 cut(s) 417
SinI GGWCC 1 cut(s) 99
SmlI CTYRAG 1 cut(s) 617
SmoI CTYRAG 1 cut(s) 617
SpeI ACTAGT 1 cut(s) 128
Sse9I AATT 7 cut(s) 15, 221, 319, 371, 540, 574, 610
SsiI CCGC 2 cut(s) 240, 387
SspI AATATT 3 cut(s) 117, 232, 554
SspMI CTAG 1 cut(s) 129
StyD4I CCNGG 1 cut(s) 581
StyI CCWWGG 2 cut(s) 512, 652
TaiI ACGT 1 cut(s) 126
TaqI TCGA 1 cut(s) 63
TasI AATT 7 cut(s) 15, 221, 319, 371, 540, 574, 610
TfiI GAWTC 3 cut(s) 181, 427, 670
Tru1I TTAA 6 cut(s) 9, 225, 293, 309, 578, 690
Tru9I TTAA 6 cut(s) 9, 225, 293, 309, 578, 690
TscAI CASTG 1 cut(s) 100
TseFI GTSAC 2 cut(s) 124, 251
TseI GCWGC 2 cut(s) 81, 624
Tsp45I GTSAC 2 cut(s) 124, 251
TspDTI ATGAA 1 cut(s) 521
TspGWI ACGGA 1 cut(s) 549
TspRI CASTG 1 cut(s) 100
VpaK11BI GGWCC 1 cut(s) 99
XapI RAATTY 2 cut(s) 15, 574
XspI CTAG 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.