MD01G1097800.v1.1

LRR receptor-like serine threonine-protein kinase At3g47570

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
21200712 .. 21202082
1371 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1097800.v1.1.491

Sequence Viewer

Length: 1371 bp
ATGGGGATTTACAAGTTCATTTCACCCCTTCTCTTCTTCTCATATTTCTGCATGCATGCATTTGTTCTGAACTCATTTCTTAGTTTGGCCCTCGCCGGATCAAACAAGACGGATAAACTGGCCTTGCTCGAATTCAAGGCTTGGATAACCACAGACCCCTTTGGAGTCATGACTTCATGGAACGAAACCCTCCACTTTTGCCAATGGCACGGCATTACCTGCAGTCACCGCCACAAGAGGGTCACAACGTTGACGCTGAGGTCCTTGAAGCTTGGAGGCTCCATATCGCCACATGTTGGAAATTTGAGTTTCCTCAGAGTGTTTAGTCTCTCAAACAACAGCTTTAGCCATGAAATCCCTTCAGAAATTGGCCGTCTGCGCAGGTTGCAACGTTTGGGATTGCAAAATAATTCACTGAGTGGGGAAATTCCTGCTAATTTATCAGGTTGCTCTGAACTCAACTACATAATTATTGGCGGCAATTTGTTAGAAGGTAGTATCCCTAAGGAGCTTGGCACCTTGTTAAAGCTAATTATATTCGATATTGCATACAACCACCATACAGGAAGTATCCCTTACTCTTTTAGCAACACATCATCTCTTGAAGTGTTTGGTGCAGCTTTTAATAGTTTAAGTGGCAGTATTCCAGATATCTTTGGTCGATTGACCAATTTTTATTTTCTTGGATTGGATGGAAATAACTTGTCTGGTACGATCCCTCCCTCAATTTTCAATGTCTCTTCTCTTGAAACCTTTGCTGTGGGACTTAATTACAACCTCCAAGGCACTTTTCCTTCAAACTTGGGCAATTCCTGTCCAAGTCTCCAAACTTTTGCCATCAGTAATAACCAGTTTAGTGGGATTATACCTGTTTCAATATCTAATGCCTCAAATCTGTTTGAACTAGCAATACACAAAAACCAACTGCACGGAGAAGTCCCCTCTTTGAAAAACTTACACAATCTTGGGCGGTTTACTCTTGCTATTAACCATCTTGGAAGTGAAGGAACTGGTGATGATTTGAGCTTTCTTTGCGATCTGACTAATGCCACCGGTTTACAATACTTGGAAATGGGTGGAAACAACTTTTGGGGTACGCTGCCTCAGTGCTTAGCCAACCTGTCTTCTTCACTTGTATCTTTCTACGTAGACTATAATAGTATATTTGGCAGTATCCCGAAAGGGATGGAAAATCTGCATAACCTGGAAAGCATAGCGCTGTCTGGCAACCGGTTATCAGGTCTCATCCCTCCTGAAATAGGAAGGCTTTCCAAATTATATGTAGTATATATGGAAAAAAAACTCGCTCTCTGGGAATGTTCCATCATCTTTTGGAAATTTAAGTCGATTAACTCATCTGCATCTACATGA

Protein Analysis

457

Amino Acids

50.01

Weight (kDa)

7.22

Isoelectric Point (pI)

33.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 75 2.4e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 84 - 186 9.5e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 259
Acc16I TGCGCA 1 cut(s) 380
Acc36I ACCTGC 2 cut(s) 227, 372
AccB1I GGYRCC 1 cut(s) 515
AccB7I CCANNNNNTGG 1 cut(s) 296
AccI GTMKAC 1 cut(s) 1149
AciI CCGC 3 cut(s) 229, 477, 970
AclI AACGTT 2 cut(s) 248, 391
AclWI GGATC 2 cut(s) 106, 709
AcoI YGGCCR 1 cut(s) 370
AcsI RAATTY 4 cut(s) 131, 301, 426, 1337
AcuI CTGAAG 1 cut(s) 345
AdeI CACNNNGTG 1 cut(s) 419
AfaI GTAC 2 cut(s) 712, 1096
AfeI AGCGCT 1 cut(s) 1218
AfiI CCNNNNNNNGG 3 cut(s) 238, 296, 1259
AflIII ACRYGT 1 cut(s) 292
AgeI ACCGGT 2 cut(s) 1052, 1230
AgsI TTSAA 9 cut(s) 136, 268, 605, 733, 749, 798, 876, 902, 949
AjnI CCWGG 1 cut(s) 1203
AjuI GAANNNNNNNTTGG 4 cut(s) 774, 806, 1072, 1104
AluBI AGCT 6 cut(s) 271, 342, 511, 529, 620, 1026
AluI AGCT 6 cut(s) 271, 342, 511, 529, 620, 1026
Alw26I GTCTC 4 cut(s) 332, 742, 827, 1247
AlwI GGATC 2 cut(s) 106, 709
Aor51HI AGCGCT 1 cut(s) 1218
AoxI GGCC 3 cut(s) 87, 120, 370
ApeKI GCWGC 2 cut(s) 617, 1099
ApoI RAATTY 4 cut(s) 131, 301, 426, 1337
AsiGI ACCGGT 2 cut(s) 1052, 1230
Asp700I GAANNNNTTC 1 cut(s) 1267
AspLEI GCGC 2 cut(s) 381, 1219
AspS9I GGNCC 2 cut(s) 88, 261
AsuHPI GGTGA 3 cut(s) 15, 218, 1025
AvaII GGWCC 1 cut(s) 261
AxyI CCTNAGG 1 cut(s) 504
BanI GGYRCC 1 cut(s) 515
BbsI GAAGAC 1 cut(s) 1116
BbvCI CCTCAGC 1 cut(s) 257
BbvI GCAGC 2 cut(s) 629, 1086
BccI CCATC 5 cut(s) 686, 845, 999, 1180, 1331
BceAI ACGGC 2 cut(s) 226, 357
BciT130I CCWGG 1 cut(s) 1205
BciVI GTATCC 3 cut(s) 509, 581, 1184
BcoDI GTCTC 4 cut(s) 332, 742, 827, 1247
BfaI CTAG 1 cut(s) 905
BfmI CTRYAG 1 cut(s) 220
BfoI RGCGCY 1 cut(s) 1220
BfuAI ACCTGC 2 cut(s) 227, 372
BfuI GTATCC 3 cut(s) 509, 581, 1184
BisI GCNGC 3 cut(s) 478, 618, 1100
BlpI GCTNAGC 1 cut(s) 1111
BlsI GCNGC 3 cut(s) 479, 619, 1101
Bme1390I CCNGG 1 cut(s) 1205
Bme18I GGWCC 1 cut(s) 261
BmgT120I GGNCC 2 cut(s) 88, 261
BmiI GGNNCC 2 cut(s) 280, 517
BmrFI CCNGG 1 cut(s) 1205
BpiI GAAGAC 1 cut(s) 1116
Bpu10I CCTNAGC 1 cut(s) 257
Bpu1102I GCTNAGC 1 cut(s) 1111
BsaAI YACGTR 1 cut(s) 1147
BsaI GGTCTC 1 cut(s) 1247
BsaJI CCNNGG 1 cut(s) 781
BsaWI WCCGGW 2 cut(s) 1052, 1230
BsaXI ACNNNNNCTCC 2 cut(s) 703, 733
Bsc4I CCNNNNNNNGG 3 cut(s) 238, 296, 1259
Bse118I RCCGGY 2 cut(s) 1052, 1230
Bse1I ACTGG 3 cut(s) 123, 850, 1015
Bse21I CCTNAGG 1 cut(s) 504
BseBI CCWGG 1 cut(s) 1205
BseDI CCNNGG 1 cut(s) 781
BseGI GGATG 3 cut(s) 697, 1191, 1245
BseLI CCNNNNNNNGG 3 cut(s) 238, 296, 1259
BseMII CTCAG 4 cut(s) 248, 328, 407, 1118
BseNI ACTGG 3 cut(s) 123, 850, 1015
BseXI GCAGC 2 cut(s) 629, 1086
BsgI GTGCAG 2 cut(s) 636, 911
BshFI GGCC 3 cut(s) 89, 122, 372
BshNI GGYRCC 1 cut(s) 515
BshTI ACCGGT 2 cut(s) 1052, 1230
BsiSI CCGG 3 cut(s) 96, 1053, 1231
BslFI GGGAC 2 cut(s) 777, 923
BslI CCNNNNNNNGG 3 cut(s) 238, 296, 1259
BsmAI GTCTC 4 cut(s) 332, 742, 827, 1247
BsmFI GGGAC 2 cut(s) 777, 923
BsnI GGCC 3 cut(s) 89, 122, 372
Bso31I GGTCTC 1 cut(s) 1247
Bsp143I GATC 3 cut(s) 98, 714, 1036
Bsp1720I GCTNAGC 1 cut(s) 1111
BspACI CCGC 3 cut(s) 229, 477, 970
BspANI GGCC 3 cut(s) 89, 122, 372
BspCNI CTCAG 4 cut(s) 249, 327, 408, 1117
BspHI TCATGA 1 cut(s) 168
BspLI GGNNCC 2 cut(s) 280, 517
BspMAI CTGCAG 1 cut(s) 224
BspMI ACCTGC 2 cut(s) 227, 372
BspPI GGATC 2 cut(s) 106, 709
BspT107I GGYRCC 1 cut(s) 515
BspTNI GGTCTC 1 cut(s) 1247
BsrFI RCCGGY 2 cut(s) 1052, 1230
BsrI ACTGG 3 cut(s) 123, 850, 1015
BssAI RCCGGY 2 cut(s) 1052, 1230
BssECI CCNNGG 1 cut(s) 781
BssMI GATC 3 cut(s) 98, 714, 1036
BssT1I CCWWGG 1 cut(s) 781
Bst2UI CCWGG 1 cut(s) 1205
Bst6I CTCTTC 2 cut(s) 38, 745
BstAPI GCANNNNNTGC 1 cut(s) 219
BstBAI YACGTR 1 cut(s) 1147
BstC8I GCNNGC 2 cut(s) 53, 57
BstDEI CTNAG 7 cut(s) 80, 257, 314, 416, 504, 1104, 1111
BstENI CCTNNNNNAGG 1 cut(s) 1257
BstF5I GGATG 3 cut(s) 697, 1191, 1245
BstH2I RGCGCY 1 cut(s) 1220
BstHHI GCGC 2 cut(s) 381, 1219
BstKTI GATC 3 cut(s) 101, 717, 1039
BstMAI GTCTC 4 cut(s) 332, 742, 827, 1247
BstMBI GATC 3 cut(s) 98, 714, 1036
BstMWI GCNNNNNNNGC 5 cut(s) 219, 228, 378, 385, 1032
BstNI CCWGG 1 cut(s) 1205
BstNSI RCATGY 3 cut(s) 55, 59, 296
BstSCI CCNGG 1 cut(s) 1203
BstSFI CTRYAG 1 cut(s) 220
BstSNI TACGTA 1 cut(s) 1147
BstV1I GCAGC 2 cut(s) 629, 1086
BstV2I GAAGAC 1 cut(s) 1116
BstXI CCANNNNNNTGG 1 cut(s) 857
Bsu36I CCTNAGG 1 cut(s) 504
BsuI GTATCC 3 cut(s) 509, 581, 1184
BsuRI GGCC 3 cut(s) 89, 122, 372
BtsCI GGATG 3 cut(s) 697, 1191, 1245
BtsIMutI CAGTG 2 cut(s) 413, 1112
BveI ACCTGC 2 cut(s) 227, 372
Cac8I GCNNGC 2 cut(s) 53, 57
CciI TCATGA 1 cut(s) 168
CfoI GCGC 2 cut(s) 381, 1219
Cfr10I RCCGGY 2 cut(s) 1052, 1230
Cfr13I GGNCC 2 cut(s) 88, 261
CseI GACGC 1 cut(s) 262
Csp6I GTAC 2 cut(s) 711, 1095
CspAI ACCGGT 2 cut(s) 1052, 1230
CviAII CATG 7 cut(s) 52, 56, 169, 177, 293, 350, 1368
CviQI GTAC 2 cut(s) 711, 1095
DdeI CTNAG 7 cut(s) 80, 257, 314, 416, 504, 1104, 1111
DpnI GATC 3 cut(s) 100, 716, 1038
DpnII GATC 3 cut(s) 98, 714, 1036
DraIII CACNNNGTG 1 cut(s) 419
DrdI GACNNNNNNGTC 1 cut(s) 259
DseDI GACNNNNNNGTC 1 cut(s) 259
EaeI YGGCCR 1 cut(s) 370
Eam1104I CTCTTC 2 cut(s) 38, 745
EarI CTCTTC 2 cut(s) 38, 745
Eco105I TACGTA 1 cut(s) 1147
Eco130I CCWWGG 1 cut(s) 781
Eco31I GGTCTC 1 cut(s) 1247
Eco32I GATATC 1 cut(s) 652
Eco47I GGWCC 1 cut(s) 261
Eco47III AGCGCT 1 cut(s) 1218
Eco57I CTGAAG 1 cut(s) 345
Eco81I CCTNAGG 1 cut(s) 504
EcoNI CCTNNNNNAGG 1 cut(s) 1257
EcoO109I RGGNCCY 1 cut(s) 261
EcoRI GAATTC 1 cut(s) 131
EcoRII CCWGG 1 cut(s) 1203
EcoRV GATATC 1 cut(s) 652
EcoT14I CCWWGG 1 cut(s) 781
EcoT22I ATGCAT 2 cut(s) 57, 61
ErhI CCWWGG 1 cut(s) 781
FaeI CATG 7 cut(s) 55, 59, 172, 180, 296, 353, 1371
FalI AAGNNNNNCTT 2 cut(s) 559, 591
FaqI GGGAC 2 cut(s) 777, 923
FatI CATG 7 cut(s) 51, 55, 168, 176, 292, 349, 1367
FblI GTMKAC 1 cut(s) 1149
Fnu4HI GCNGC 3 cut(s) 478, 618, 1100
FokI GGATG 3 cut(s) 704, 1198, 1232
Fsp4HI GCNGC 3 cut(s) 478, 618, 1100
FspBI CTAG 1 cut(s) 905
FspI TGCGCA 1 cut(s) 380
GlaI GCGC 2 cut(s) 380, 1218
GluI GCNGC 3 cut(s) 478, 618, 1100
HaeII RGCGCY 1 cut(s) 1220
HaeIII GGCC 3 cut(s) 89, 122, 372
HapII CCGG 3 cut(s) 96, 1053, 1231
HgaI GACGC 1 cut(s) 262
HhaI GCGC 2 cut(s) 381, 1219
Hin1II CATG 7 cut(s) 55, 59, 172, 180, 296, 353, 1371
Hin6I GCGC 2 cut(s) 379, 1217
HinP1I GCGC 2 cut(s) 379, 1217
HincII GTYRAC 1 cut(s) 252
HindII GTYRAC 1 cut(s) 252
HindIII AAGCTT 1 cut(s) 269
HinfI GANTC 1 cut(s) 165
HpaII CCGG 3 cut(s) 96, 1053, 1231
HphI GGTGA 3 cut(s) 15, 218, 1025
Hpy166II GTNNAC 4 cut(s) 252, 975, 1058, 1150
Hpy188I TCNGA 5 cut(s) 69, 317, 364, 454, 1041
Hpy188III TCNNGA 6 cut(s) 169, 602, 647, 746, 1177, 1253
Hpy8I GTNNAC 4 cut(s) 252, 975, 1058, 1150
HpyAV CCTTC 6 cut(s) 38, 369, 485, 804, 998, 1257
HpyCH4IV ACGT 3 cut(s) 248, 391, 1146
HpyF10VI GCNNNNNNNGC 5 cut(s) 219, 228, 378, 385, 1032
HpyF3I CTNAG 7 cut(s) 80, 257, 314, 416, 504, 1104, 1111
HpySE526I ACGT 3 cut(s) 248, 391, 1146
Hsp92II CATG 7 cut(s) 55, 59, 172, 180, 296, 353, 1371
HspAI GCGC 2 cut(s) 379, 1217
Kzo9I GATC 3 cut(s) 98, 714, 1036
LmnI GCTCC 2 cut(s) 284, 508
Lsp1109I GCAGC 2 cut(s) 629, 1086
MaeI CTAG 1 cut(s) 905
MaeII ACGT 3 cut(s) 248, 391, 1146
MaeIII GTNAC 2 cut(s) 224, 241
MalI GATC 3 cut(s) 100, 716, 1038
MboI GATC 3 cut(s) 98, 714, 1036
MboII GAAGA 5 cut(s) 25, 28, 732, 1116, 1119
MlyI GAGTC 1 cut(s) 174
MmeI TCCRAC 1 cut(s) 277
Mph1103I ATGCAT 2 cut(s) 57, 61
MroXI GAANNNNTTC 1 cut(s) 1267
MseI TTAA 7 cut(s) 524, 624, 632, 768, 987, 1341, 1350
MslI CAYNNNNRTG 1 cut(s) 1366
MspI CCGG 3 cut(s) 96, 1053, 1231
MspR9I CCNGG 1 cut(s) 1205
MvaI CCWGG 1 cut(s) 1205
MwoI GCNNNNNNNGC 5 cut(s) 219, 228, 378, 385, 1032
NdeII GATC 3 cut(s) 98, 714, 1036
NlaIII CATG 7 cut(s) 55, 59, 172, 180, 296, 353, 1371
NlaIV GGNNCC 2 cut(s) 280, 517
NmuCI GTSAC 2 cut(s) 224, 241
NsbI TGCGCA 1 cut(s) 380
NsiI ATGCAT 2 cut(s) 57, 61
NspI RCATGY 3 cut(s) 55, 59, 296
PaeI GCATGC 2 cut(s) 55, 59
PagI TCATGA 1 cut(s) 168
PciI ACATGT 1 cut(s) 292
PdmI GAANNNNTTC 1 cut(s) 1267
PflMI CCANNNNNTGG 1 cut(s) 296
PinAI ACCGGT 2 cut(s) 1052, 1230
PkrI GCNGC 3 cut(s) 479, 619, 1101
PleI GAGTC 1 cut(s) 173
PpsI GAGTC 1 cut(s) 173
Ppu21I YACGTR 1 cut(s) 1147
PpuMI RGGWCCY 1 cut(s) 261
PscI ACATGT 1 cut(s) 292
Psp1406I AACGTT 2 cut(s) 248, 391
Psp5II RGGWCCY 1 cut(s) 261
Psp6I CCWGG 1 cut(s) 1203
PspGI CCWGG 1 cut(s) 1203
PspN4I GGNNCC 2 cut(s) 280, 517
PspPI GGNCC 2 cut(s) 88, 261
PspPPI RGGWCCY 1 cut(s) 261
PsrI GAACNNNNNNTAC 2 cut(s) 894, 926
PstI CTGCAG 1 cut(s) 224
RsaI GTAC 2 cut(s) 712, 1096
RsaNI GTAC 2 cut(s) 711, 1095
RseI CAYNNNNRTG 1 cut(s) 1366
SaqAI TTAA 7 cut(s) 524, 624, 632, 768, 987, 1341, 1350
SatI GCNGC 3 cut(s) 478, 618, 1100
Sau3AI GATC 3 cut(s) 98, 714, 1036
Sau96I GGNCC 2 cut(s) 88, 261
SchI GAGTC 1 cut(s) 174
ScrFI CCNGG 1 cut(s) 1205
SfcI CTRYAG 1 cut(s) 220
SinI GGWCC 1 cut(s) 261
SmiMI CAYNNNNRTG 1 cut(s) 1366
SnaBI TACGTA 1 cut(s) 1147
SphI GCATGC 2 cut(s) 55, 59
SsiI CCGC 3 cut(s) 229, 477, 970
SspMI CTAG 1 cut(s) 905
StyD4I CCNGG 1 cut(s) 1203
StyI CCWWGG 1 cut(s) 781
TaiI ACGT 3 cut(s) 251, 394, 1149
TaqI TCGA 4 cut(s) 129, 540, 661, 1346
TauI GCSGC 1 cut(s) 480
Tru1I TTAA 7 cut(s) 524, 624, 632, 768, 987, 1341, 1350
Tru9I TTAA 7 cut(s) 524, 624, 632, 768, 987, 1341, 1350
TscAI CASTG 2 cut(s) 420, 1112
TseFI GTSAC 2 cut(s) 224, 241
TseI GCWGC 2 cut(s) 617, 1099
Tsp45I GTSAC 2 cut(s) 224, 241
TspDTI ATGAA 3 cut(s) 7, 165, 366
TspGWI ACGGA 2 cut(s) 125, 945
TspRI CASTG 2 cut(s) 420, 1112
Van91I CCANNNNNTGG 1 cut(s) 296
VpaK11BI GGWCC 1 cut(s) 261
XagI CCTNNNNNAGG 1 cut(s) 1257
XapI RAATTY 4 cut(s) 131, 301, 426, 1337
XceI RCATGY 3 cut(s) 55, 59, 296
XmiI GTMKAC 1 cut(s) 1149
XmnI GAANNNNTTC 1 cut(s) 1267
XspI CTAG 1 cut(s) 905
Zsp2I ATGCAT 2 cut(s) 57, 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.