RLG00000029272
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
35809157 .. 35811221
2065 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029272

Sequence Viewer

Length: 1950 bp
ATGCTACTGTTTCCCCTGATGATCATCAACTTGGCCTCTTCAAATCTGGGAGGAAATGAGGTGGAAAGACTATCCTTGCTTGCCTTTAAATCTGAAATAGTCAGTGATCCTCTGGGGATCCTTAGCTCCTGGAATGATTCCTCCAACTTATGTGTTGAGTGGCGAGGGATTACTTGCGGCCGAAGACACCAGCTAGTCACGGTTCTGGACCTCCAGTCCAGCCACCTGATGGGTATTCTATCTCCACACATCGGAAACTTGAGCTTTCTCAGGACATTAAATCTCCAAAGCAATAGTTTCAACCACACCATCCCTCAAGAAATTGGTCGATTGTCCCGGCTGCAAGTACTACACCTTGGGAACAACTTCTTCGAAGGTGATATCCCCAAAGAAATTAGCCGATGCACAAATTTGATAAGTTTGCACCTGAACGGAAACATGTTGCATGGGAGAATTCCTGAATCTTTGAGTTCTTTGCGGCAGATTCAAGATTTTGACCTCTCTCGTAACAACTTGTCTGGAACAATTCCCGATTATTTGCAGAATTTCACCTTCTTGCTTAATTTGAATCTATCCTTTAATGATTTTGAAGGTGAAGTAGGAGTTTTCAGGAATACAAGTGTGGTTTCTATTATGGGAAACACACGAATTTGTGGAGGTGTAGCTCAGTTAAGATTGCCCAATTTTATCTCTAATCGATCCAACTCAAATAAGCCAAAATCATTTTCTAAGCATAAACCAATTATCCCATTTTTTTGTGGGACAGTTGGAATTATTATCTTAGTGGTGTGCTTTGTACGCCTCTATAGATCAAGAAAAGCAAGAGTTGAGCAAAGAAAAGCAAGAGTTCAGTCAACTTCAGAACGATCATTGGACATTTCATTCTTAAAGTTGTCATATGGAGACCTCTTTCAAGCAACTGGTGGGTTCTCTTCTTGGAATTTGATTGGTGCTGGTAGTTCTGGTTCTGTGTTCTGGGGAGTTCTCAATCAGCCAAAAGAAAGAATTGTTGCTGTCAAAGTACTCAATCTTCAAAACGCGACTACTTCTAATAGTTTCATAGCTGAATGTCAATTCTTGAAAAACGCTAGGCACCGAAATCTTGTCAAACTAGTGACTGCTTGCTCTAGTATTGATTTTCAAGGAAATGAATTCAAAGCTTTGGTTTTTGAGTACATGATGCATGGAAGTCTAGATGAGTGGCTGCATGATTCAGCTGACAGGGTAGTTGAGCTACCCATTGTGGAGGTGCATTTGAATCTTATCCAAAGGGTAAATATTGCCATTGACGTAGCTAGCGCTTTGGATTATTTGCACAATTATTTTCACATCCCAATAGTTCATTGTGATTTAAAGCCCAGTAACGTTCTCTTGGAAAAAGACATGACTGCCTGTGTTTGTGACTTTGGTTTGGCAAGTTACCTCCCAAACGCTTCTTGTCCGGTTTCTTCACTAGAACGCTCTTCCAATTCGATAACGGGTACCATTGGCTATATTCCCCCAGAGTATGGCATGGGAAGTGAGGTGTCAACCTACGGAGACGTGTATAGCTATGGAATCCTGTTACTGGAGATGCTTACTGGTAAGAGGCCAACAGATGACATGTTTACAGACGACATCGACTTGCACAATTTTGTTCTGATGGCTTTGCCTGAACGTGTGAAAGAAATATGTGATCCTGTGCTTCTTCAAGAAAAGGAAAGCAGCACTAGTACAAATCCTGCAAGCAATAGGAATGATGTCCAAAATGATGAAACACGAAGAGTTGAAGAGTGCCTTATTTCCATTGCTAGGATAGGAGTTGCATGTTCTGTGCATTTGCCCAAAGCGCGACTGGAGATTGGGAAAGTTTTAGCTGAACTACGTGTAATCAGGGATGTACTGACTGGAACCAGGATGCCTAGAGAGCACAATGATACTATAACTGCAAAAGGCCTTAGCTGCCAATGA

Protein Analysis

650

Amino Acids

72.31

Weight (kDa)

6.66

Isoelectric Point (pI)

41.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 22 - 59 1.1e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 63 - 196 3.3e-13 Leucine-rich repeat region
Pkinase PF00069 314 - 539 8e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 315 - 539 1.3e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1481
AccB1I GGYRCC 2 cut(s) 1092, 1481
AccB7I CCANNNNNTGG 2 cut(s) 229, 1508
AccII CGCG 2 cut(s) 1040, 1831
AciI CCGC 2 cut(s) 177, 478
AclI AACGTT 1 cut(s) 1365
AclWI GGATC 5 cut(s) 101, 112, 125, 693, 1670
AcoI YGGCCR 1 cut(s) 178
AcsI RAATTY 6 cut(s) 409, 453, 544, 648, 940, 1151
AcuI CTGAAG 1 cut(s) 843
AfaI GTAC 7 cut(s) 348, 798, 1023, 1175, 1483, 1714, 1881
AfeI AGCGCT 1 cut(s) 1300
AfiI CCNNNNNNNGG 5 cut(s) 229, 251, 1508, 1567, 1791
AflIII ACRYGT 5 cut(s) 438, 1542, 1602, 1657, 1864
AhdI GACNNNNNGTC 1 cut(s) 214
AhlI ACTAGT 2 cut(s) 1111, 1709
AjiI CACGTC 1 cut(s) 1543
AjnI CCWGG 2 cut(s) 128, 1892
AjuI GAANNNNNNNTTGG 2 cut(s) 709, 741
Alw21I GWGCWC 1 cut(s) 1911
Alw26I GTCTC 2 cut(s) 897, 1533
AlwI GGATC 5 cut(s) 101, 112, 125, 693, 1670
Aor51HI AGCGCT 1 cut(s) 1300
AoxI GGCC 4 cut(s) 33, 178, 1589, 1933
ApeKI GCWGC 4 cut(s) 340, 1204, 1704, 1941
ApoI RAATTY 6 cut(s) 409, 453, 544, 648, 940, 1151
Asp700I GAANNNNTTC 1 cut(s) 365
Asp718I GGTACC 1 cut(s) 1481
AspLEI GCGC 2 cut(s) 1301, 1831
AspS9I GGNCC 1 cut(s) 208
AsuC2I CCSGG 1 cut(s) 337
AsuHPI GGTGA 3 cut(s) 389, 541, 605
AsuII TTCGAA 1 cut(s) 372
AsuNHI GCTAGC 1 cut(s) 1295
AvaII GGWCC 1 cut(s) 208
BamHI GGATCC 1 cut(s) 117
BanI GGYRCC 2 cut(s) 1092, 1481
BarI GAAGNNNNNNTAC 2 cut(s) 1014, 1046
BbsI GAAGAC 1 cut(s) 190
Bbv12I GWGCWC 1 cut(s) 1911
BbvI GCAGC 4 cut(s) 327, 1191, 1716, 1928
BccI CCATC 3 cut(s) 223, 317, 1636
BciT130I CCWGG 2 cut(s) 130, 1894
BclI TGATCA 1 cut(s) 21
BcnI CCSGG 1 cut(s) 337
BcoDI GTCTC 2 cut(s) 897, 1533
BcuI ACTAGT 2 cut(s) 1111, 1709
BfmI CTRYAG 1 cut(s) 805
BfoI RGCGCY 1 cut(s) 1302
BisI GCNGC 6 cut(s) 178, 341, 479, 1205, 1705, 1942
BlsI GCNGC 6 cut(s) 179, 342, 480, 1206, 1706, 1943
BmcAI AGTACT 2 cut(s) 348, 1023
Bme1390I CCNGG 3 cut(s) 130, 337, 1894
Bme18I GGWCC 1 cut(s) 208
BmeRI GACNNNNNGTC 1 cut(s) 214
BmgBI CACGTC 1 cut(s) 1543
BmgT120I GGNCC 1 cut(s) 208
BmiI GGNNCC 4 cut(s) 119, 1094, 1483, 1891
BmrFI CCNGG 3 cut(s) 130, 337, 1894
BmrI ACTGGG 1 cut(s) 1353
BmsI GCATC 4 cut(s) 392, 1170, 1563, 1887
BmtI GCTAGC 1 cut(s) 1299
BmuI ACTGGG 1 cut(s) 1353
BpiI GAAGAC 1 cut(s) 190
BpmI CTGGAG 3 cut(s) 197, 1589, 1856
Bpu10I CCTNAGC 2 cut(s) 122, 1937
Bpu14I TTCGAA 1 cut(s) 372
BpuEI CTTGAG 2 cut(s) 280, 300
BpuMI CCSGG 1 cut(s) 337
Bsa29I ATCGAT 1 cut(s) 697
BsaAI YACGTR 1 cut(s) 1865
BsaBI GATNNNNATC 1 cut(s) 23
BsaI GGTCTC 1 cut(s) 897
BsaJI CCNNGG 1 cut(s) 355
BsaWI WCCGGW 1 cut(s) 1441
Bsc4I CCNNNNNNNGG 5 cut(s) 229, 251, 1508, 1567, 1791
Bse1I ACTGG 7 cut(s) 214, 925, 1359, 1572, 1585, 1839, 1891
Bse3DI GCAATG 1 cut(s) 1785
Bse8I GATNNNNATC 1 cut(s) 23
BseBI CCWGG 2 cut(s) 130, 1894
BseCI ATCGAT 1 cut(s) 697
BseDI CCNNGG 1 cut(s) 355
BseGI GGATG 4 cut(s) 309, 1329, 1882, 1902
BseJI GATNNNNATC 1 cut(s) 23
BseLI CCNNNNNNNGG 5 cut(s) 229, 251, 1508, 1567, 1791
BseMI GCAATG 1 cut(s) 1785
BseMII CTCAG 2 cut(s) 283, 680
BseNI ACTGG 7 cut(s) 214, 925, 1359, 1572, 1585, 1839, 1891
BseX3I CGGCCG 1 cut(s) 178
BseXI GCAGC 4 cut(s) 327, 1191, 1716, 1928
Bsh1236I CGCG 2 cut(s) 1040, 1831
Bsh1285I CGRYCG 1 cut(s) 181
BshFI GGCC 4 cut(s) 35, 180, 1591, 1935
BshNI GGYRCC 2 cut(s) 1092, 1481
BshVI ATCGAT 1 cut(s) 697
BsiEI CGRYCG 1 cut(s) 181
BsiHKAI GWGCWC 1 cut(s) 1911
BsiSI CCGG 2 cut(s) 337, 1442
BslFI GGGAC 2 cut(s) 319, 775
BslI CCNNNNNNNGG 5 cut(s) 229, 251, 1508, 1567, 1791
BsmAI GTCTC 2 cut(s) 897, 1533
BsmBI CGTCTC 1 cut(s) 1533
BsmFI GGGAC 2 cut(s) 319, 775
BsnI GGCC 4 cut(s) 35, 180, 1591, 1935
Bso31I GGTCTC 1 cut(s) 897
Bsp119I TTCGAA 1 cut(s) 372
Bsp1286I GDGCHC 1 cut(s) 1911
Bsp143I GATC 7 cut(s) 21, 106, 117, 698, 809, 866, 1675
BspACI CCGC 2 cut(s) 177, 478
BspANI GGCC 4 cut(s) 35, 180, 1591, 1935
BspCNI CTCAG 2 cut(s) 282, 679
BspDI ATCGAT 1 cut(s) 697
BspFNI CGCG 2 cut(s) 1040, 1831
BspLI GGNNCC 4 cut(s) 119, 1094, 1483, 1891
BspOI GCTAGC 1 cut(s) 1299
BspPI GGATC 5 cut(s) 101, 112, 125, 693, 1670
BspQI GCTCTTC 1 cut(s) 1468
BspT104I TTCGAA 1 cut(s) 372
BspT107I GGYRCC 2 cut(s) 1092, 1481
BspTNI GGTCTC 1 cut(s) 897
BsrDI GCAATG 1 cut(s) 1785
BsrI ACTGG 7 cut(s) 214, 925, 1359, 1572, 1585, 1839, 1891
BssECI CCNNGG 1 cut(s) 355
BssMI GATC 7 cut(s) 21, 106, 117, 698, 809, 866, 1675
BssT1I CCWWGG 1 cut(s) 355
Bst2UI CCWGG 2 cut(s) 130, 1894
Bst4CI ACNGT 3 cut(s) 9, 202, 766
Bst6I CTCTTC 5 cut(s) 43, 937, 1468, 1756, 1764
BstBAI YACGTR 1 cut(s) 1865
BstBI TTCGAA 1 cut(s) 372
BstC8I GCNNGC 4 cut(s) 81, 1123, 1297, 1726
BstDEI CTNAG 6 cut(s) 122, 269, 666, 729, 781, 1937
BstF5I GGATG 4 cut(s) 309, 1329, 1882, 1902
BstFNI CGCG 2 cut(s) 1040, 1831
BstH2I RGCGCY 1 cut(s) 1302
BstHHI GCGC 2 cut(s) 1301, 1831
BstKTI GATC 7 cut(s) 24, 109, 120, 701, 812, 869, 1678
BstMAI GTCTC 2 cut(s) 897, 1533
BstMBI GATC 7 cut(s) 21, 106, 117, 698, 809, 866, 1675
BstMCI CGRYCG 1 cut(s) 181
BstMWI GCNNNNNNNGC 4 cut(s) 798, 1828, 1906, 1941
BstNI CCWGG 2 cut(s) 130, 1894
BstNSI RCATGY 3 cut(s) 442, 1606, 1809
BstSCI CCNGG 3 cut(s) 128, 335, 1892
BstSFI CTRYAG 1 cut(s) 805
BstUI CGCG 2 cut(s) 1040, 1831
BstV1I GCAGC 4 cut(s) 327, 1191, 1716, 1928
BstV2I GAAGAC 1 cut(s) 190
BstX2I RGATCY 1 cut(s) 117
BstYI RGATCY 1 cut(s) 117
BstZI CGGCCG 1 cut(s) 178
Bsu15I ATCGAT 1 cut(s) 697
BsuRI GGCC 4 cut(s) 35, 180, 1591, 1935
BsuTUI ATCGAT 1 cut(s) 697
BtrI CACGTC 1 cut(s) 1543
BtsCI GGATG 4 cut(s) 309, 1329, 1882, 1902
BtsIMutI CAGTG 1 cut(s) 109
Cac8I GCNNGC 4 cut(s) 81, 1123, 1297, 1726
CfoI GCGC 2 cut(s) 1301, 1831
Cfr13I GGNCC 1 cut(s) 208
ClaI ATCGAT 1 cut(s) 697
Csp6I GTAC 7 cut(s) 347, 797, 1022, 1174, 1482, 1713, 1880
CviAII CATG 9 cut(s) 439, 446, 1177, 1184, 1208, 1384, 1513, 1603, 1806
CviQI GTAC 7 cut(s) 347, 797, 1022, 1174, 1482, 1713, 1880
DdeI CTNAG 6 cut(s) 122, 269, 666, 729, 781, 1937
DpnI GATC 7 cut(s) 23, 108, 119, 700, 811, 868, 1677
DpnII GATC 7 cut(s) 21, 106, 117, 698, 809, 866, 1675
DraI TTTAAA 2 cut(s) 88, 1353
DriI GACNNNNNGTC 1 cut(s) 214
EaeI YGGCCR 1 cut(s) 178
EagI CGGCCG 1 cut(s) 178
Eam1104I CTCTTC 5 cut(s) 43, 937, 1468, 1756, 1764
Eam1105I GACNNNNNGTC 1 cut(s) 214
EarI CTCTTC 5 cut(s) 43, 937, 1468, 1756, 1764
EclXI CGGCCG 1 cut(s) 178
Eco130I CCWWGG 1 cut(s) 355
Eco147I AGGCCT 1 cut(s) 1935
Eco31I GGTCTC 1 cut(s) 897
Eco32I GATATC 1 cut(s) 382
Eco47I GGWCC 1 cut(s) 208
Eco47III AGCGCT 1 cut(s) 1300
Eco52I CGGCCG 1 cut(s) 178
Eco57I CTGAAG 1 cut(s) 843
EcoRI GAATTC 2 cut(s) 453, 1151
EcoRII CCWGG 2 cut(s) 128, 1892
EcoRV GATATC 1 cut(s) 382
EcoT14I CCWWGG 1 cut(s) 355
EcoT22I ATGCAT 1 cut(s) 1185
ErhI CCWWGG 1 cut(s) 355
Esp3I CGTCTC 1 cut(s) 1533
FaeI CATG 9 cut(s) 442, 449, 1180, 1187, 1211, 1387, 1516, 1606, 1809
FalI AAGNNNNNCTT 2 cut(s) 1761, 1793
FaqI GGGAC 2 cut(s) 319, 775
FatI CATG 9 cut(s) 438, 445, 1176, 1183, 1207, 1383, 1512, 1602, 1805
FauNDI CATATG 1 cut(s) 898
FbaI TGATCA 1 cut(s) 21
Fnu4HI GCNGC 6 cut(s) 178, 341, 479, 1205, 1705, 1942
FokI GGATG 4 cut(s) 296, 1316, 1889, 1909
Fsp4HI GCNGC 6 cut(s) 178, 341, 479, 1205, 1705, 1942
GlaI GCGC 2 cut(s) 1300, 1830
GluI GCNGC 6 cut(s) 178, 341, 479, 1205, 1705, 1942
GsuI CTGGAG 3 cut(s) 197, 1589, 1856
HaeII RGCGCY 1 cut(s) 1302
HaeIII GGCC 4 cut(s) 35, 180, 1591, 1935
HapII CCGG 2 cut(s) 337, 1442
HhaI GCGC 2 cut(s) 1301, 1831
Hin1II CATG 9 cut(s) 442, 449, 1180, 1187, 1211, 1387, 1516, 1606, 1809
Hin6I GCGC 2 cut(s) 1299, 1829
HinP1I GCGC 2 cut(s) 1299, 1829
HincII GTYRAC 2 cut(s) 855, 1530
HindII GTYRAC 2 cut(s) 855, 1530
HindIII AAGCTT 1 cut(s) 1158
HinfI GANTC 7 cut(s) 137, 461, 484, 568, 1211, 1258, 1557
HpaII CCGG 2 cut(s) 337, 1442
HphI GGTGA 3 cut(s) 389, 541, 605
Hpy166II GTNNAC 3 cut(s) 855, 1530, 1608
Hpy188I TCNGA 4 cut(s) 94, 254, 862, 1641
Hpy8I GTNNAC 3 cut(s) 855, 1530, 1608
HpyAV CCTTC 3 cut(s) 368, 562, 584
HpyCH4III ACNGT 3 cut(s) 9, 202, 766
HpyCH4IV ACGT 5 cut(s) 1290, 1365, 1542, 1657, 1864
HpyF10VI GCNNNNNNNGC 4 cut(s) 798, 1828, 1906, 1941
HpyF3I CTNAG 6 cut(s) 122, 269, 666, 729, 781, 1937
HpySE526I ACGT 5 cut(s) 1290, 1365, 1542, 1657, 1864
Hsp92II CATG 9 cut(s) 442, 449, 1180, 1187, 1211, 1387, 1516, 1606, 1809
HspAI GCGC 2 cut(s) 1299, 1829
KpnI GGTACC 1 cut(s) 1485
Ksp22I TGATCA 1 cut(s) 21
Kzo9I GATC 7 cut(s) 21, 106, 117, 698, 809, 866, 1675
LguI GCTCTTC 1 cut(s) 1468
LmnI GCTCC 1 cut(s) 131
Lsp1109I GCAGC 4 cut(s) 327, 1191, 1716, 1928
LweI GCATC 4 cut(s) 392, 1170, 1563, 1887
MaeII ACGT 5 cut(s) 1290, 1365, 1542, 1657, 1864
MaeIII GTNAC 7 cut(s) 196, 506, 1114, 1361, 1400, 1418, 1563
MalI GATC 7 cut(s) 23, 108, 119, 700, 811, 868, 1677
MboI GATC 7 cut(s) 21, 106, 117, 698, 809, 866, 1675
MflI RGATCY 1 cut(s) 117
MhlI GDGCHC 1 cut(s) 1911
MmeI TCCRAC 3 cut(s) 168, 726, 748
Mph1103I ATGCAT 1 cut(s) 1185
MroXI GAANNNNTTC 1 cut(s) 365
MseI TTAA 7 cut(s) 87, 278, 561, 579, 671, 887, 1352
MspA1I CMGCKG 1 cut(s) 1217
MspI CCGG 2 cut(s) 337, 1442
MspR9I CCNGG 3 cut(s) 130, 337, 1894
MvaI CCWGG 2 cut(s) 130, 1894
MvnI CGCG 2 cut(s) 1040, 1831
MwoI GCNNNNNNNGC 4 cut(s) 798, 1828, 1906, 1941
NciI CCSGG 1 cut(s) 337
NdeI CATATG 1 cut(s) 898
NdeII GATC 7 cut(s) 21, 106, 117, 698, 809, 866, 1675
NheI GCTAGC 1 cut(s) 1295
NlaIII CATG 9 cut(s) 442, 449, 1180, 1187, 1211, 1387, 1516, 1606, 1809
NlaIV GGNNCC 4 cut(s) 119, 1094, 1483, 1891
NmuCI GTSAC 3 cut(s) 196, 1114, 1400
NsiI ATGCAT 1 cut(s) 1185
NspI RCATGY 3 cut(s) 442, 1606, 1809
NspV TTCGAA 1 cut(s) 372
PceI AGGCCT 1 cut(s) 1935
PciI ACATGT 2 cut(s) 438, 1602
PciSI GCTCTTC 1 cut(s) 1468
PdmI GAANNNNTTC 1 cut(s) 365
PfeI GAWTC 7 cut(s) 137, 461, 484, 568, 1211, 1258, 1557
PflMI CCANNNNNTGG 2 cut(s) 229, 1508
PfoI TCCNGGA 1 cut(s) 128
PkrI GCNGC 6 cut(s) 179, 342, 480, 1206, 1706, 1943
Ppu21I YACGTR 1 cut(s) 1865
PscI ACATGT 2 cut(s) 438, 1602
Psp1406I AACGTT 1 cut(s) 1365
Psp6I CCWGG 2 cut(s) 128, 1892
PspGI CCWGG 2 cut(s) 128, 1892
PspN4I GGNNCC 4 cut(s) 119, 1094, 1483, 1891
PspPI GGNCC 1 cut(s) 208
PsrI GAACNNNNNNTAC 2 cut(s) 949, 981
PsuI RGATCY 1 cut(s) 117
PvuII CAGCTG 1 cut(s) 1217
RsaI GTAC 7 cut(s) 348, 798, 1023, 1175, 1483, 1714, 1881
RsaNI GTAC 7 cut(s) 347, 797, 1022, 1174, 1482, 1713, 1880
SapI GCTCTTC 1 cut(s) 1468
SaqAI TTAA 7 cut(s) 87, 278, 561, 579, 671, 887, 1352
SatI GCNGC 6 cut(s) 178, 341, 479, 1205, 1705, 1942
Sau3AI GATC 7 cut(s) 21, 106, 117, 698, 809, 866, 1675
Sau96I GGNCC 1 cut(s) 208
ScaI AGTACT 2 cut(s) 348, 1023
ScrFI CCNGG 3 cut(s) 130, 337, 1894
SduI GDGCHC 1 cut(s) 1911
SfaNI GCATC 4 cut(s) 392, 1170, 1563, 1887
SfcI CTRYAG 1 cut(s) 805
SfuI TTCGAA 1 cut(s) 372
SinI GGWCC 1 cut(s) 208
SmlI CTYRAG 2 cut(s) 259, 315
SmoI CTYRAG 2 cut(s) 259, 315
SpeI ACTAGT 2 cut(s) 1111, 1709
SseBI AGGCCT 1 cut(s) 1935
SsiI CCGC 2 cut(s) 177, 478
SspI AATATT 1 cut(s) 1279
StuI AGGCCT 1 cut(s) 1935
StyD4I CCNGG 3 cut(s) 128, 335, 1892
StyI CCWWGG 1 cut(s) 355
TaaI ACNGT 3 cut(s) 9, 202, 766
TaiI ACGT 5 cut(s) 1293, 1368, 1545, 1660, 1867
TaqI TCGA 5 cut(s) 328, 372, 697, 1472, 1620
TatI WGTACW 5 cut(s) 346, 1021, 1173, 1712, 1879
TauI GCSGC 2 cut(s) 180, 481
TfiI GAWTC 7 cut(s) 137, 461, 484, 568, 1211, 1258, 1557
Tru1I TTAA 7 cut(s) 87, 278, 561, 579, 671, 887, 1352
Tru9I TTAA 7 cut(s) 87, 278, 561, 579, 671, 887, 1352
TscAI CASTG 1 cut(s) 109
TseFI GTSAC 3 cut(s) 196, 1114, 1400
TseI GCWGC 4 cut(s) 340, 1204, 1704, 1941
Tsp45I GTSAC 3 cut(s) 196, 1114, 1400
TspDTI ATGAA 5 cut(s) 870, 1048, 1164, 1331, 1767
TspGWI ACGGA 2 cut(s) 447, 1551
TspRI CASTG 1 cut(s) 109
Van91I CCANNNNNTGG 2 cut(s) 229, 1508
VpaK11BI GGWCC 1 cut(s) 208
XapI RAATTY 6 cut(s) 409, 453, 544, 648, 940, 1151
XbaI TCTAGA 1 cut(s) 1192
XceI RCATGY 3 cut(s) 442, 1606, 1809
XcmI CCANNNNNNNNNTGG 2 cut(s) 226, 1831
XmnI GAANNNNTTC 1 cut(s) 365
ZrmI AGTACT 2 cut(s) 348, 1023
Zsp2I ATGCAT 1 cut(s) 1185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.