MD07G1219100.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
29648394 .. 29651619
3226 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1219100.v1.1.491

Sequence Viewer

Length: 3114 bp
ATGGAGTTCTCAAGTATTCATATTAGCATTTGGTTTATTTTCATGCAACCACTCTTTCTTATCTTTCTTTTTAGCTCTGCCTCATCCTCCCGTTTGGCGGGGAATGAGGTGGATAGGCTTTCCTTGCTTGCCTTTAAAGCTGAAATCGTGACCGATACCCTCGGCATCCTTAGCTCTTGGAATGAATCCCTCCACTTCTGTCATTGGCCAGGCATTACTTGTGGCCGCAGACACCAGAGGGTTACAGTGCTCGACCTTCAATCAAGCGGGCTGGCCGGCCACCTATCTCCCCACATTGGAAACTTAAGCTTTCTGAGGGCTTTAAACCTTCCAAACAATAGCTTCAGCCACACCATCCCTCCAGAAATTGGTCGTTTGTTCCGCTTGGAAAGACTACTCCTTTATAACAACTCCTTCGGTGGTCATATCCCATTCAACATATCACGTTGCTCTAACCTCCAATACCTTGGCTTATATGGCAACACTCTTAGTGGCGAACTTCCAACTGAAATTGGCTCATTGTCCAAGCTTCGGTTACTTGATTTAAGCAAGAACATTTTTTATGGGAAAATCCCACCTTCTTTTGGGAATCTTTCTTCTCTTCAAAAGCTATCTGTGCACACAAATAATCTGCATGGAGGTATTCCAAATAGCCTTGGCCAGTTGAAAAGCTTAGTGGCTTTCTCATTGGCGGTTAATTATTTGAATGGTACCGTTCCTCTCTCCATATACAACCTCTCGTCAATTAAAGTCATTTATGTGCTTCAAAACAACCTTCATGGAACTCTTCCTCCTGGCTTGGGCCACACTATATTTCCAAACCTCGAAACCTTTGCTTTCCATACCAACCAATTCACTGGACCAGTACCAGCTTCAATCTCCAATGCCTCAAGCCTTTCACTATTTGCTATCTCATTCAATAAGTTTATTGGGAAAGTGCCTAGTCTGGCACGCCTGTCAAATTTGTATTGGCTTGATCTTCAAGAGAACAATCTTGGAAATAATGAGGAAGGTGACTTGGATTTCATCTCTTCTCTAGTTAATTGCACCAATTTACATGCTTTATCTATCGGCGTCAATAATTTTGGAGGAGTGCTACCTGAATCTATCAGCAATCTCTCAACAAAGCTCAGGGAAATATATTTTAAGGGGAATCAGATACACGGAAACATTCCCATCGGGATTGTAAATCTTATCAACTTGGAGAGACTAAGCTTATCTGCAAATTTATTGGCAGGCACTATACCGAGTTCAATAGGTAAATTGAATAAGCTTTATGTCCTATTTCTAGGTTGGAATGAATTGTCGGGTAATGTTCCATCATCTCTAGGAAATCTAACTTCATTAAGCAGTTTGTATCTCGAGTCAAACCAGTTACACGGCAGCATACCACAAAGTCTTGGAGACTCCAGGTTTATGTTATATTTGGATCTTTCCCACAACAATCTTAGAGGTCCAATTCCAAAACAATTCATCAATACATTGATTTACTTGGATCTATCTGGAAACCAACTTACTGAATCCATTCCCACGGAAGTAGGTAACTTACAGCATCTTGTTTTATTGAATGTTTCTGAAAACAAGTTATCTGGTGAGATTCCACAAAGTTTAGGGAGTTGCACAAGTTTGACGACTCTGTCTCTGAGACAAAATTTATTGCAGGGGACAATTCCTAAATCCTTGAGCTCTTTGAGAGGAATTGAAAATTTTGACCTCTCTCGCAACAACTTGTCTGGCATAATTCCCAACTATTTGGGGAGTTTCATCTTCTTGCAGAATTTGAACCTTTCATTTAATGATTTTGAAGGTGCAGTACCAATCCAAGGAGTTTTTAAGAATGCAAGTGCGGTATCTGTTGTGGGAAACACACGACTTTGTGGAGGTATACCTCACTTAAGATTGCCTAAATGTGTCTCCAAGCAATCTAAGTGCGGGTTATCTCCTAAGCTGAACTTAATTATCTTAGTTTCATGTGGGGTTGTCAGCTTGGTCTTGGTGTTGTTACTTGCACTTCTTTATCGATATAGAAAGGATAAAGCGCTTAAATCAACTTCAGGATCATCACTAGGGGTTTCGCTTTTGAAACTGTCCTATGGAGATCTCCTCAAAGCAACTGATGGGTTCTCTGCTTCGAATCTGATTGGTTCTGGAAGTTTCGGGTCCGTGTACAAGGGAGTTCTCAATCAGCATGAAGAAAGAAATGTTGCGGTGAAAGTACTCAATCTTCAAAGTTCAAGAGCTTCTAAAAGTTTCATATCTGAATGTGAAGCCTTGAAAAGCATTAGGCATCGAAATCTTGCCAAGCTACTAAGTGCTTGTTCAAGCATTGATTTTCAAGGAAACGATTTCAAAGCCCTGGTGTATGAGTTCATGGTGAATGGAAGCCTAGATGAGTGGCTGCACATATCAGCTCAAGGTGTAGATAGGCCAGCCAATCTGCCGAAGAATCTGAATCTCACTCAAAGAGTTAACATTGCCATCGATGTAGCGTGTGCTCTGGATTATTTGCACAACAGCTCCCACATCCCAATAGTTCATTGTGATATAAAGCCCAGCAACATTTTGTTAGACAGTGACATGACTGCTTGTGTTGGTGATTTCGGTTTAGCAAGATACCTTCGGGATGCTTCTTGCCCATCTCCTTTGCACGATAGCAGTTCCAATGTCATAAAAGGCACCATAGGCTATACTCCCCCAGAGTATGGAATGGGAGGCGAGGTGTCAACATATGGCGACGTGTATAGCTACGGAATACTGTTGTTGGAGATGTTAATTGGCAAGAGGCCGACAGATGACATGTTTAACGGTGGTATGGACCTGCATAGTTTTGTTATGATGGCTCTACCAGAGCGTGTGAGAGAAATATGTGATCCACTACTTGTTCAAATTGAAGAAAGCAGCAGCAGTACTAATTCCAGAAGTAATGTGGGGAATCTTGCCCCAAATGATCGAAGAAAAAGGGTTGTGGAGTGCTTGACTTCCATTGCAAGAGTAGGAGTTGCTTGTTCTGTAGCGATGCCGAGAGAGCGAAATGACATGAGCAATGTGGTAGTTGAATTGAGTCTAATAAGGGATGTGCTAACTGGAACTAGGATGCCTAGAGAGTATCCGTGA

Protein Analysis

1038

Amino Acids

113.16

Weight (kDa)

8.4

Isoelectric Point (pI)

40.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 38 - 74 2.2e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 147 - 230 3.7e-11 Leucine-rich repeat region
LRR_14 PF23598 344 - 456 2.7e-07 Leucine-rich repeat region
LRR_8 PF13855 400 - 459 4.9e-06 Leucine rich repeat
LRR_14 PF23598 494 - 600 1.5e-07 Leucine-rich repeat region
Pkinase PF00069 710 - 931 3e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 711 - 935 9.9e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 405
AasI GACNNNNNNGTC 1 cut(s) 1636
Acc36I ACCTGC 1 cut(s) 2826
Acc65I GGTACC 1 cut(s) 710
AccB1I GGYRCC 2 cut(s) 710, 2675
AccB7I CCANNNNNTGG 2 cut(s) 368, 2702
AccI GTMKAC 1 cut(s) 1885
AciI CCGC 8 cut(s) 98, 226, 267, 382, 692, 1847, 1932, 2207
AclWI GGATC 4 cut(s) 1437, 1503, 2065, 2864
AcoI YGGCCR 5 cut(s) 206, 223, 273, 277, 658
AcsI RAATTY 5 cut(s) 961, 1225, 1651, 1705, 1777
AcuI CTGAAG 2 cut(s) 328, 2037
AcyI GRCGYC 1 cut(s) 1074
AfaI GTAC 6 cut(s) 712, 867, 1815, 2168, 2217, 2908
AfeI AGCGCT 1 cut(s) 2040
AfiI CCNNNNNNNGG 8 cut(s) 97, 296, 368, 531, 584, 800, 1823, 2702
AflII CTTAAG 2 cut(s) 304, 1894
AflIII ACRYGT 2 cut(s) 2736, 2796
AjiI CACGTC 1 cut(s) 2737
AjnI CCWGG 4 cut(s) 208, 793, 1409, 2355
AloI GAACNNNNNNTCC 2 cut(s) 775, 807
Alw21I GWGCWC 4 cut(s) 252, 621, 1688, 2497
Alw26I GTCTC 5 cut(s) 1201, 1398, 1639, 1644, 1918
Alw44I GTGCAC 1 cut(s) 617
AlwI GGATC 4 cut(s) 1437, 1503, 2065, 2864
Ama87I CYCGRG 1 cut(s) 1361
Aor51HI AGCGCT 1 cut(s) 2040
AoxI GGCC 8 cut(s) 206, 223, 273, 277, 658, 802, 2426, 2783
ApaLI GTGCAC 1 cut(s) 617
ApeKI GCWGC 4 cut(s) 1383, 2398, 2898, 2901
ApoI RAATTY 5 cut(s) 961, 1225, 1651, 1705, 1777
Asp700I GAANNNNTTC 1 cut(s) 1524
Asp718I GGTACC 1 cut(s) 710
AspLEI GCGC 1 cut(s) 2041
AspS9I GGNCC 5 cut(s) 802, 860, 1454, 2160, 2815
AsuHPI GGTGA 5 cut(s) 1025, 1604, 2221, 2386, 2606
AsuII TTCGAA 1 cut(s) 2132
AvaI CYCGRG 1 cut(s) 1361
AvaII GGWCC 4 cut(s) 860, 1454, 2160, 2815
BaeGI GKGCMC 1 cut(s) 621
BalI TGGCCA 2 cut(s) 208, 660
BanI GGYRCC 2 cut(s) 710, 2675
BanII GRGCYC 1 cut(s) 1688
BarI GAAGNNNNNNTAC 4 cut(s) 1797, 1829, 2208, 2240
Bbv12I GWGCWC 4 cut(s) 252, 621, 1688, 2497
BbvI GCAGC 4 cut(s) 1395, 2385, 2910, 2913
BccI CCATC 7 cut(s) 362, 1184, 1327, 2111, 2486, 2644, 2830
BceAI ACGGC 1 cut(s) 1396
BcgI CGANNNNNNTGC 2 cut(s) 815, 849
BciT130I CCWGG 4 cut(s) 210, 795, 1411, 2357
BcoDI GTCTC 5 cut(s) 1201, 1398, 1639, 1644, 1918
BfaI CTAG 8 cut(s) 942, 1037, 1289, 1328, 2066, 2387, 3090, 3099
BfmI CTRYAG 1 cut(s) 3009
BfoI RGCGCY 1 cut(s) 2042
BfrI CTTAAG 2 cut(s) 304, 1894
BfuAI ACCTGC 1 cut(s) 2826
BglII AGATCT 1 cut(s) 2098
BisI GCNGC 5 cut(s) 226, 1384, 2399, 2899, 2902
BlsI GCNGC 5 cut(s) 227, 1385, 2400, 2900, 2903
BmcAI AGTACT 2 cut(s) 2217, 2908
Bme1390I CCNGG 4 cut(s) 210, 795, 1411, 2357
Bme18I GGWCC 4 cut(s) 860, 1454, 2160, 2815
BmeT110I CYCGRG 1 cut(s) 1361
BmgBI CACGTC 1 cut(s) 2737
BmgT120I GGNCC 5 cut(s) 802, 860, 1454, 2160, 2815
BmiI GGNNCC 3 cut(s) 712, 2161, 2677
BmrFI CCNGG 4 cut(s) 210, 795, 1411, 2357
BmsI GCATC 6 cut(s) 174, 1561, 2296, 2614, 3006, 3084
BplI GAGNNNNNCTC 2 cut(s) 2088, 2120
BpmI CTGGAG 2 cut(s) 345, 1393
Bpu10I CCTNAGC 3 cut(s) 170, 1130, 1944
Bpu14I TTCGAA 1 cut(s) 2132
BpuEI CTTGAG 3 cut(s) 874, 1702, 2397
Bsa29I ATCGAT 2 cut(s) 2020, 2481
BsaHI GRCGYC 1 cut(s) 1074
BsaJI CCNNGG 6 cut(s) 160, 466, 655, 1530, 1822, 2355
BsaXI ACNNNNNCTCC 8 cut(s) 343, 373, 775, 805, 2501, 2531, 2703, 2733
Bsc4I CCNNNNNNNGG 8 cut(s) 97, 296, 368, 531, 584, 800, 1823, 2702
Bse118I RCCGGY 1 cut(s) 275
Bse1I ACTGG 5 cut(s) 661, 862, 863, 1372, 3088
Bse3DI GCAATG 3 cut(s) 2472, 2982, 3049
BseBI CCWGG 4 cut(s) 210, 795, 1411, 2357
BseCI ATCGAT 2 cut(s) 2020, 2481
BseDI CCNNGG 6 cut(s) 160, 466, 655, 1530, 1822, 2355
BseGI GGATG 7 cut(s) 83, 165, 354, 2523, 2629, 3079, 3099
BseLI CCNNNNNNNGG 8 cut(s) 97, 296, 368, 531, 584, 800, 1823, 2702
BseMI GCAATG 3 cut(s) 2472, 2982, 3049
BseMII CTCAG 3 cut(s) 305, 1144, 1634
BseNI ACTGG 5 cut(s) 661, 862, 863, 1372, 3088
BseRI GAGGAG 2 cut(s) 1104, 2093
BseSI GKGCMC 1 cut(s) 621
BseXI GCAGC 4 cut(s) 1395, 2385, 2910, 2913
BseYI CCCAGC 1 cut(s) 2552
BsgI GTGCAG 2 cut(s) 1830, 2384
BshFI GGCC 8 cut(s) 208, 225, 275, 279, 660, 804, 2428, 2785
BshNI GGYRCC 2 cut(s) 710, 2675
BshVI ATCGAT 2 cut(s) 2020, 2481
BsiHKAI GWGCWC 4 cut(s) 252, 621, 1688, 2497
BsiHKCI CYCGRG 1 cut(s) 1361
BsiSI CCGG 1 cut(s) 276
BslFI GGGAC 1 cut(s) 1678
BslI CCNNNNNNNGG 8 cut(s) 97, 296, 368, 531, 584, 800, 1823, 2702
BsmAI GTCTC 5 cut(s) 1201, 1398, 1639, 1644, 1918
BsmFI GGGAC 1 cut(s) 1678
BsmI GAATGC 1 cut(s) 1843
BsnI GGCC 8 cut(s) 208, 225, 275, 279, 660, 804, 2428, 2785
BsoBI CYCGRG 1 cut(s) 1361
Bsp119I TTCGAA 1 cut(s) 2132
Bsp1286I GDGCHC 4 cut(s) 252, 621, 1688, 2497
Bsp1407I TGTACA 1 cut(s) 2166
Bsp143I GATC 7 cut(s) 976, 1429, 1495, 2057, 2098, 2869, 2947
BspACI CCGC 8 cut(s) 98, 226, 267, 382, 692, 1847, 1932, 2207
BspANI GGCC 8 cut(s) 208, 225, 275, 279, 660, 804, 2428, 2785
BspCNI CTCAG 3 cut(s) 306, 1143, 1635
BspDI ATCGAT 2 cut(s) 2020, 2481
BspLI GGNNCC 3 cut(s) 712, 2161, 2677
BspMI ACCTGC 1 cut(s) 2826
BspPI GGATC 4 cut(s) 1437, 1503, 2065, 2864
BspT104I TTCGAA 1 cut(s) 2132
BspT107I GGYRCC 2 cut(s) 710, 2675
BspTI CTTAAG 2 cut(s) 304, 1894
BsrDI GCAATG 3 cut(s) 2472, 2982, 3049
BsrFI RCCGGY 1 cut(s) 275
BsrGI TGTACA 1 cut(s) 2166
BsrI ACTGG 5 cut(s) 661, 862, 863, 1372, 3088
BssAI RCCGGY 1 cut(s) 275
BssECI CCNNGG 6 cut(s) 160, 466, 655, 1530, 1822, 2355
BssMI GATC 7 cut(s) 976, 1429, 1495, 2057, 2098, 2869, 2947
BssNAI GTATAC 1 cut(s) 1886
BssNI GRCGYC 1 cut(s) 1074
BssT1I CCWWGG 3 cut(s) 466, 655, 1822
Bst1107I GTATAC 1 cut(s) 1886
Bst2UI CCWGG 4 cut(s) 210, 795, 1411, 2357
Bst4CI ACNGT 6 cut(s) 247, 715, 2088, 2573, 2757, 2807
Bst6I CTCTTC 3 cut(s) 606, 792, 1036
BstACI GRCGYC 1 cut(s) 1074
BstAFI CTTAAG 2 cut(s) 304, 1894
BstAUI TGTACA 1 cut(s) 2166
BstBI TTCGAA 1 cut(s) 2132
BstC8I GCNNGC 7 cut(s) 129, 269, 273, 277, 952, 1237, 2430
BstDSI CCRYGG 1 cut(s) 1530
BstF5I GGATG 7 cut(s) 83, 165, 354, 2523, 2629, 3079, 3099
BstH2I RGCGCY 1 cut(s) 2042
BstHHI GCGC 1 cut(s) 2041
BstKTI GATC 7 cut(s) 979, 1432, 1498, 2060, 2101, 2872, 2950
BstMAI GTCTC 5 cut(s) 1201, 1398, 1639, 1644, 1918
BstMBI GATC 7 cut(s) 976, 1429, 1495, 2057, 2098, 2869, 2947
BstMWI GCNNNNNNNGC 7 cut(s) 124, 137, 171, 477, 616, 2682, 3025
BstNI CCWGG 4 cut(s) 210, 795, 1411, 2357
BstNSI RCATGY 2 cut(s) 1061, 2800
BstSCI CCNGG 4 cut(s) 208, 793, 1409, 2355
BstSFI CTRYAG 1 cut(s) 3009
BstSLI GKGCMC 1 cut(s) 621
BstV1I GCAGC 4 cut(s) 1395, 2385, 2910, 2913
BstX2I RGATCY 3 cut(s) 1429, 1495, 2098
BstXI CCANNNNNNTGG 3 cut(s) 467, 857, 1753
BstYI RGATCY 3 cut(s) 1429, 1495, 2098
BstZ17I GTATAC 1 cut(s) 1886
Bsu15I ATCGAT 2 cut(s) 2020, 2481
BsuRI GGCC 8 cut(s) 208, 225, 275, 279, 660, 804, 2428, 2785
BsuTUI ATCGAT 2 cut(s) 2020, 2481
BtgI CCRYGG 1 cut(s) 1530
BtgZI GCGATG 1 cut(s) 3029
BtrI CACGTC 1 cut(s) 2737
BtsCI GGATG 7 cut(s) 83, 165, 354, 2523, 2629, 3079, 3099
BtsIMutI CAGTG 3 cut(s) 252, 855, 2578
BveI ACCTGC 1 cut(s) 2826
Cac8I GCNNGC 7 cut(s) 129, 269, 273, 277, 952, 1237, 2430
CfoI GCGC 1 cut(s) 2041
Cfr10I RCCGGY 1 cut(s) 275
Cfr13I GGNCC 5 cut(s) 802, 860, 1454, 2160, 2815
ClaI ATCGAT 2 cut(s) 2020, 2481
CseI GACGC 1 cut(s) 1063
Csp6I GTAC 6 cut(s) 711, 866, 1814, 2167, 2216, 2907
CviQI GTAC 6 cut(s) 711, 866, 1814, 2167, 2216, 2907
DpnI GATC 7 cut(s) 978, 1431, 1497, 2059, 2100, 2871, 2949
DpnII GATC 7 cut(s) 976, 1429, 1495, 2057, 2098, 2869, 2947
DraI TTTAAA 2 cut(s) 136, 324
DrdI GACNNNNNNGTC 1 cut(s) 1636
DseDI GACNNNNNNGTC 1 cut(s) 1636
EaeI YGGCCR 5 cut(s) 206, 223, 273, 277, 658
Eam1104I CTCTTC 3 cut(s) 606, 792, 1036
EarI CTCTTC 3 cut(s) 606, 792, 1036
Ecl136II GAGCTC 1 cut(s) 1686
Eco130I CCWWGG 3 cut(s) 466, 655, 1822
Eco24I GRGCYC 1 cut(s) 1688
Eco47I GGWCC 4 cut(s) 860, 1454, 2160, 2815
Eco47III AGCGCT 1 cut(s) 2040
Eco53kI GAGCTC 1 cut(s) 1686
Eco57I CTGAAG 2 cut(s) 328, 2037
Eco88I CYCGRG 1 cut(s) 1361
EcoICRI GAGCTC 1 cut(s) 1686
EcoRII CCWGG 4 cut(s) 208, 793, 1409, 2355
EcoT14I CCWWGG 3 cut(s) 466, 655, 1822
EcoT38I GRGCYC 1 cut(s) 1688
ErhI CCWWGG 3 cut(s) 466, 655, 1822
FalI AAGNNNNNCTT 2 cut(s) 1937, 1969
FaqI GGGAC 1 cut(s) 1678
FauI CCCGC 3 cut(s) 91, 260, 1925
FauNDI CATATG 1 cut(s) 2728
FblI GTMKAC 1 cut(s) 1885
Fnu4HI GCNGC 5 cut(s) 226, 1384, 2399, 2899, 2902
FokI GGATG 7 cut(s) 70, 152, 341, 2510, 2636, 3086, 3106
FriOI GRGCYC 1 cut(s) 1688
FseI GGCCGGCC 1 cut(s) 279
Fsp4HI GCNGC 5 cut(s) 226, 1384, 2399, 2899, 2902
FspBI CTAG 8 cut(s) 942, 1037, 1289, 1328, 2066, 2387, 3090, 3099
GlaI GCGC 1 cut(s) 2040
GluI GCNGC 5 cut(s) 226, 1384, 2399, 2899, 2902
GsaI CCCAGC 1 cut(s) 2556
GsuI CTGGAG 2 cut(s) 345, 1393
HaeII RGCGCY 1 cut(s) 2042
HaeIII GGCC 8 cut(s) 208, 225, 275, 279, 660, 804, 2428, 2785
HapII CCGG 1 cut(s) 276
HgaI GACGC 1 cut(s) 1063
HhaI GCGC 1 cut(s) 2041
Hin1I GRCGYC 1 cut(s) 1074
Hin6I GCGC 1 cut(s) 2039
HinP1I GCGC 1 cut(s) 2039
HincII GTYRAC 2 cut(s) 2470, 2724
HindII GTYRAC 2 cut(s) 2470, 2724
HindIII AAGCTT 5 cut(s) 307, 527, 670, 1213, 1271
HpaI GTTAAC 1 cut(s) 2470
HpaII CCGG 1 cut(s) 276
HphI GGTGA 5 cut(s) 1025, 1604, 2221, 2386, 2606
Hpy166II GTNNAC 5 cut(s) 619, 1886, 2167, 2470, 2724
Hpy188I TCNGA 7 cut(s) 315, 1158, 1576, 1644, 2139, 2260, 2451
Hpy8I GTNNAC 5 cut(s) 619, 1886, 2167, 2470, 2724
Hpy99I CGWCG 1 cut(s) 2738
HpyAV CCTTC 8 cut(s) 266, 338, 424, 588, 785, 1004, 1799, 2627
HpyCH4III ACNGT 6 cut(s) 247, 715, 2088, 2573, 2757, 2807
HpyCH4IV ACGT 2 cut(s) 445, 2736
HpyF10VI GCNNNNNNNGC 7 cut(s) 124, 137, 171, 477, 616, 2682, 3025
HpySE526I ACGT 2 cut(s) 445, 2736
Hsp92I GRCGYC 1 cut(s) 1074
HspAI GCGC 1 cut(s) 2039
KpnI GGTACC 1 cut(s) 714
KroI GCCGGC 1 cut(s) 275
KroNI GCCGGC 1 cut(s) 277
KspAI GTTAAC 1 cut(s) 2470
Kzo9I GATC 7 cut(s) 976, 1429, 1495, 2057, 2098, 2869, 2947
LmnI GCTCC 1 cut(s) 2522
Lsp1109I GCAGC 4 cut(s) 1395, 2385, 2910, 2913
LweI GCATC 6 cut(s) 174, 1561, 2296, 2614, 3006, 3084
MaeI CTAG 8 cut(s) 942, 1037, 1289, 1328, 2066, 2387, 3090, 3099
MaeII ACGT 2 cut(s) 445, 2736
MaeIII GTNAC 8 cut(s) 148, 241, 534, 1013, 1374, 1541, 2001, 2573
MalI GATC 7 cut(s) 978, 1431, 1497, 2059, 2100, 2871, 2949
MboI GATC 7 cut(s) 976, 1429, 1495, 2057, 2098, 2869, 2947
MflI RGATCY 3 cut(s) 1429, 1495, 2098
MhlI GDGCHC 4 cut(s) 252, 621, 1688, 2497
MlsI TGGCCA 2 cut(s) 208, 660
MluNI TGGCCA 2 cut(s) 208, 660
MlyI GAGTC 4 cut(s) 1373, 1400, 1627, 3070
MmeI TCCRAC 3 cut(s) 527, 1274, 2742
Mox20I TGGCCA 2 cut(s) 208, 660
MroNI GCCGGC 1 cut(s) 275
MroXI GAANNNNTTC 1 cut(s) 1524
MscI TGGCCA 2 cut(s) 208, 660
MslI CAYNNNNRTG 1 cut(s) 758
Msp20I TGGCCA 2 cut(s) 208, 660
MspCI CTTAAG 2 cut(s) 304, 1894
MspI CCGG 1 cut(s) 276
MspR9I CCNGG 4 cut(s) 210, 795, 1411, 2357
Mva1269I GAATGC 1 cut(s) 1843
MvaI CCWGG 4 cut(s) 210, 795, 1411, 2357
MwoI GCNNNNNNNGC 7 cut(s) 124, 137, 171, 477, 616, 2682, 3025
NaeI GCCGGC 1 cut(s) 277
NdeI CATATG 1 cut(s) 2728
NdeII GATC 7 cut(s) 976, 1429, 1495, 2057, 2098, 2869, 2947
NgoMIV GCCGGC 1 cut(s) 275
NlaIV GGNNCC 3 cut(s) 712, 2161, 2677
NmeAIII GCCGAG 2 cut(s) 141, 3045
NmuCI GTSAC 3 cut(s) 148, 1013, 2573
NspI RCATGY 2 cut(s) 1061, 2800
NspV TTCGAA 1 cut(s) 2132
PaeR7I CTCGAG 1 cut(s) 1361
PciI ACATGT 1 cut(s) 2796
PctI GAATGC 1 cut(s) 1843
PdiI GCCGGC 1 cut(s) 277
PdmI GAANNNNTTC 1 cut(s) 1524
PflFI GACNNNGTC 1 cut(s) 1636
PflMI CCANNNNNTGG 2 cut(s) 368, 2702
PkrI GCNGC 5 cut(s) 227, 1385, 2400, 2900, 2903
PleI GAGTC 4 cut(s) 1372, 1400, 1627, 3069
PpsI GAGTC 4 cut(s) 1372, 1400, 1627, 3069
PscI ACATGT 1 cut(s) 2796
PsiI TTATAA 1 cut(s) 405
Psp124BI GAGCTC 1 cut(s) 1688
Psp6I CCWGG 4 cut(s) 208, 793, 1409, 2355
PspFI CCCAGC 1 cut(s) 2552
PspGI CCWGG 4 cut(s) 208, 793, 1409, 2355
PspN4I GGNNCC 3 cut(s) 712, 2161, 2677
PspPI GGNCC 5 cut(s) 802, 860, 1454, 2160, 2815
PsuI RGATCY 3 cut(s) 1429, 1495, 2098
PsyI GACNNNGTC 1 cut(s) 1636
RigI GGCCGGCC 1 cut(s) 279
RsaI GTAC 6 cut(s) 712, 867, 1815, 2168, 2217, 2908
RsaNI GTAC 6 cut(s) 711, 866, 1814, 2167, 2216, 2907
RseI CAYNNNNRTG 1 cut(s) 758
SacI GAGCTC 1 cut(s) 1688
SatI GCNGC 5 cut(s) 226, 1384, 2399, 2899, 2902
Sau3AI GATC 7 cut(s) 976, 1429, 1495, 2057, 2098, 2869, 2947
Sau96I GGNCC 5 cut(s) 802, 860, 1454, 2160, 2815
ScaI AGTACT 2 cut(s) 2217, 2908
SchI GAGTC 4 cut(s) 1373, 1400, 1627, 3070
ScrFI CCNGG 4 cut(s) 210, 795, 1411, 2357
SduI GDGCHC 4 cut(s) 252, 621, 1688, 2497
SfaNI GCATC 6 cut(s) 174, 1561, 2296, 2614, 3006, 3084
SfcI CTRYAG 1 cut(s) 3009
Sfr274I CTCGAG 1 cut(s) 1361
SfuI TTCGAA 1 cut(s) 2132
SinI GGWCC 4 cut(s) 860, 1454, 2160, 2815
SlaI CTCGAG 1 cut(s) 1361
SmiMI CAYNNNNRTG 1 cut(s) 758
SmlI CTYRAG 7 cut(s) 10, 304, 889, 1361, 1681, 1894, 2412
SmoI CTYRAG 7 cut(s) 10, 304, 889, 1361, 1681, 1894, 2412
SsiI CCGC 8 cut(s) 98, 226, 267, 382, 692, 1847, 1932, 2207
SspMI CTAG 8 cut(s) 942, 1037, 1289, 1328, 2066, 2387, 3090, 3099
SstI GAGCTC 1 cut(s) 1688
StyD4I CCNGG 4 cut(s) 208, 793, 1409, 2355
StyI CCWWGG 3 cut(s) 466, 655, 1822
TaaI ACNGT 6 cut(s) 247, 715, 2088, 2573, 2757, 2807
TaiI ACGT 2 cut(s) 448, 2739
TaqI TCGA 8 cut(s) 252, 825, 1362, 2020, 2132, 2290, 2481, 2950
TaqII GACCGA 1 cut(s) 167
TatI WGTACW 3 cut(s) 2166, 2215, 2906
TauI GCSGC 1 cut(s) 228
TscAI CASTG 3 cut(s) 252, 862, 2578
TseFI GTSAC 3 cut(s) 148, 1013, 2573
TseI GCWGC 4 cut(s) 1383, 2398, 2898, 2901
Tsp45I GTSAC 3 cut(s) 148, 1013, 2573
TspGWI ACGGA 5 cut(s) 1179, 1547, 2152, 2763, 3099
TspRI CASTG 3 cut(s) 252, 862, 2578
Tth111I GACNNNGTC 1 cut(s) 1636
Van91I CCANNNNNTGG 2 cut(s) 368, 2702
Vha464I CTTAAG 2 cut(s) 304, 1894
VneI GTGCAC 1 cut(s) 617
VpaK11BI GGWCC 4 cut(s) 860, 1454, 2160, 2815
XapI RAATTY 5 cut(s) 961, 1225, 1651, 1705, 1777
XceI RCATGY 2 cut(s) 1061, 2800
XcmI CCANNNNNNNNNTGG 1 cut(s) 2923
XhoI CTCGAG 1 cut(s) 1361
XmiI GTMKAC 1 cut(s) 1885
XmnI GAANNNNTTC 1 cut(s) 1524
XspI CTAG 8 cut(s) 942, 1037, 1289, 1328, 2066, 2387, 3090, 3099
ZrmI AGTACT 2 cut(s) 2217, 2908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.