Rroxscaffold_4G00310070

LRR receptor-like serine threonine-protein kinase At3g47570

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
32005150 .. 32008720
3571 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00310070.1

Sequence Viewer

Length: 3039 bp
ATGGCGCTTTACAACTTCATTTCAGTTATGCTTTTCTCATATTTTTCCATGCATGCTGTTATTCTTCCCTCATTTCTTGGTTTGGCCCTTACCGGAAATGACACAGATCGAATGGCCTTGCTCGAATTCAAGGGTAAGATAACCAGTGATCCTCTCGGAGTCATGTCTTCATGGAATAAAACCATCCACTTTTGCCACTGGCATGGTGTTATATGTGGTCGCCGCCACCAGAGGGTCACCAAGTTGGACCTGCAGTCCATGAAACTTTCAGGCTCTATATCGCCGCATGTTGGCAATTTGAGCTTTCTGAGAGTCATTTATCTACAAAACAACAGCTTCAGACATGAAATTCCTCCAGAGATGAGCCGTCTGCGCAGATTGCAAGACCTCAAATTGAACAATAATTCACTCAGTGGTGAAATTCCCTCCAACTTATCAGCTTGCTCTCAACTCCTCAGGATTATGCTTGGTTCAAATTTCCTGACTGGGCCAATTCCGGAGCAGCTTGGCGATTTGTCAGAGCTAAGAGTAGTTTCGCTCTCCACCAACAACCTTACAGGAGGTATCCCATACTCATTCAGCAACTTAACATTTCTTACGACACTTGAAGCATCTAGGAATAATTTGGATGGGAGTATTCCAGATATTTTTAACCAAATGTCCAATTTACAATATCTTGATTTTGATGGAAACAGCTTGTCTGGTAAGCTCCCTCCCTCAATCTGGAATGTCTCTTCTATCTTGCATATTGCTTTGGCAGCCAACAAAATCCAAGGAACTTTGCCCTCAAGCCTCGGTATTGCCTTCCCAAACCTAGAAGTTCTTGGTATTGATGATAACCAACTTGATGGGTCTATTCCTGTTTCAATATGTAATGCCTCAAACCTACTTCATCTGGGAGTGGGGGGAAACAAATTACATGGACAAGTTCCCTCTTTGGTGAACTTGCATAAGCTCGCGCGGTTCAGTCTTGCTTTCAATCGTCTTGGTAGCGGGGGAAGAATCGTTGATGACTTGAGCTTTCTCTGTGATTTGACTAATGCTACTAGTTTATTCATCCTGCAACTTCAAGAAAACAATTTTGGGGGGATATTACCTCAATGCACAACTAACTTGTCATCTTCTCTTGATTACTTCTCTGTAGCTGCTAATAAAATACATGGAAGTTTCCCTTATGGGTTCGGCCATTTGGCTAACCTGGAGAGCCTATGGTTGTCTGAGAATCAATTTTCAGGTAATATCCCGCCTGATGTAGGAAAGCTTGCAAACTTGTATGGCTTATACATGAATACAAACTCGTTCTCAGGGAACATTCCAGCCTCTCTTGGAAATTTGAGTCAATTAACTGAATTGTATTTAGAAGAAAACAAACTTGAAGGTAGTATCCCTTCAAGTTTAGCTGACTGTCAAAATCTGATGATCACATCACTTGGGCTCAACAATTTAAGTGGTATCATGTCCCCAGAAGTCTTTGGTCTATCTTCTTCATATCTCATTTTGGACTTATCTTATAATCATTTAACTGGTTCGCTGCCAAAGGAAGTCGGAAATTTAATAAATCTAGAGTACTTGGATGTTTCTGATAACATGTTATTTGGTGAAATTCCGGGTACCCTTGGTAGTTGTGTAAAACTCGAATATCTTAACATGCAAGGAAACTTCTTCCAAGGGCCAATTCCGTCCTCTTTGGCTTCTCTAAGAGGCATTCAAGAGTTGTACCTCTCTCGAAACAACTTGTCAGGCACAATTCCGGAGTTTCTGGAGCATTTTGAGTTTCTGCATGCTTTGAATCTATCAGATAATAATTTGGAGGGAATGACACCAAGTGAAGGTGTGTTCAAGAATGCCACTGGTACATCTGTGAAAGGAAACATCAAACTCTGCGGCGGCATACCTCAGTTTCAATTGCCACCATGCAAAGTTCAACATCCCAAACGGCGAGGGCAGGGCAGAACCTTCAAACTGATACTATCTTTGGTTTGTGGATTTGTTGGAATCACATTTGCACTAGTATTCTTGTACCTTTGTTGCTTAAGGAGGGAGAAAAAGAAGCAAAGTACTCCAAGTGATTCGGCAAATTTTCTCAACGTTTCATACCAAATTCTTCTTAAAGCTACTGATGGATTCTCTTCTGCAAACTTAATTGGTGCAGGCAGTTTCGGGTCTGTGTATAAAGGAGTGCTCGACCAAGGTGAGACAACAATTGCTGTCAAAGTTCTCAACCTTGTTCATCGCGGAGCTTCCAAAAGTTTTGCAGCCGAGTGTGAGGCCCTGAAAAACATTAGACACCGTAACCTTTTGAAGGTGCTGTCTGCATGTTCAGGTTTTGACTATCAAGGTGATGATTTCAAGGCCTTAGTCTATGAGTTCATGGGTAATGGGAGCTTAGAGGAATGGTTGCATCCACTTCAGAGAATTGGTGTGTCAAATGAGAGACCAACGAGTTTAATGTTTTCTCAAAGGTTGAACATTGCTATTGACGTTTCTATGGCATTGGATTATCTCCATAATCATTGTGAAACGCCAATAGTTCACTGTGATCTCAAGCCAAGCAATGTTCTTCTCGATGATGATATGGTCGGGCATGTTGGTGATTTTGGCTTGGTAAGATTCCTTCCCAGAACTTCTGGAAATCAATCAAGCTCTGTCGGAGTTAAAGGAACAATTGGTTATGCTCCTCCAGAGTATGGTATGGGCAATGAAGTTTGGACACAAGGAGATGTGTACAGTTTTGGCATCCTGCTGTTGGAAATGTTCACAGGAAAAAGACCAACAGATAACATGTTCCAGGGAACTGTAAACCTTCATAGCTTTGTCAGGAAAGCTCTGCCTAAGCAAGTGAGAGAGATTGTTGATCCTGTTCTAGTTCCACAGAACATTGAAGCAGAGATTAGCGCTTGGGTCAAAATTGAAGACAGCTTGATTTCAATTTTAGAAGTTGGTGTTGCTTGTTCTGCAGAGCTGCCTAGAGAACGGTTAACCATTACTGATGCTATGGCTGAGATGTGTCGGATAAGAAATAAACTTCATGCAAACTAG

Protein Analysis

1012

Amino Acids

110.84

Weight (kDa)

6.12

Isoelectric Point (pI)

37.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 72 6.9e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 82 - 181 1.7e-07 Leucine-rich repeat region
Pkinase PF00069 711 - 1000 1.9e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 713 - 932 4.7e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1512
Acc16I TGCGCA 1 cut(s) 374
Acc36I ACCTGC 1 cut(s) 258
Acc65I GGTACC 1 cut(s) 1610
AccB1I GGYRCC 1 cut(s) 1610
AccB7I CCANNNNNTGG 1 cut(s) 2687
AccII CGCG 3 cut(s) 959, 961, 2235
AccIII TCCGGA 2 cut(s) 496, 1750
AciI CCGC 8 cut(s) 223, 284, 961, 993, 1244, 1884, 1887, 2235
AclI AACGTT 1 cut(s) 2088
AclWI GGATC 2 cut(s) 143, 2849
AcoI YGGCCR 1 cut(s) 1183
AcsI RAATTY 9 cut(s) 125, 348, 420, 475, 1330, 1549, 1602, 2077, 2100
AcuI CTGAAG 2 cut(s) 322, 2393
AdeI CACNNNGTG 2 cut(s) 413, 1826
AfaI GTAC 7 cut(s) 1568, 1612, 1718, 1855, 2021, 2059, 2726
AfeI AGCGCT 1 cut(s) 2896
AfiI CCNNNNNNNGG 8 cut(s) 232, 290, 723, 1253, 1829, 2302, 2687, 2746
AflII CTTAAG 1 cut(s) 2032
AflIII ACRYGT 2 cut(s) 1587, 2781
AhdI GACNNNNNGTC 1 cut(s) 253
AhlI ACTAGT 2 cut(s) 1046, 2008
AjnI CCWGG 2 cut(s) 1197, 2787
AjuI GAANNNNNNNTTGG 4 cut(s) 1065, 1097, 1659, 1691
Alw21I GWGCWC 1 cut(s) 2184
Alw26I GTCTC 3 cut(s) 736, 2189, 2428
AlwI GGATC 2 cut(s) 143, 2849
Aor13HI TCCGGA 2 cut(s) 496, 1750
Aor51HI AGCGCT 1 cut(s) 2896
AoxI GGCC 7 cut(s) 84, 114, 488, 1183, 1670, 2268, 2352
ApeKI GCWGC 6 cut(s) 502, 758, 1145, 1531, 2255, 2962
ApoI RAATTY 9 cut(s) 125, 348, 420, 475, 1330, 1549, 1602, 2077, 2100
Asp718I GGTACC 1 cut(s) 1610
AspLEI GCGC 4 cut(s) 7, 375, 961, 2897
AspS9I GGNCC 5 cut(s) 85, 247, 488, 1670, 2269
AsuC2I CCSGG 1 cut(s) 1608
AsuHPI GGTGA 7 cut(s) 229, 428, 952, 1610, 2204, 2351, 2603
AvaII GGWCC 1 cut(s) 247
AxyI CCTNAGG 1 cut(s) 455
BaeI ACNNNNGTAYC 2 cut(s) 1845, 1878
BanI GGYRCC 1 cut(s) 1610
BanII GRGCYC 1 cut(s) 1437
BarI GAAGNNNNNNTAC 4 cut(s) 1372, 1404, 2598, 2630
BbsI GAAGAC 2 cut(s) 159, 2919
Bbv12I GWGCWC 1 cut(s) 2184
BbvI GCAGC 6 cut(s) 514, 770, 1132, 1518, 2267, 2949
BccI CCATC 5 cut(s) 191, 623, 680, 842, 2114
BceAI ACGGC 2 cut(s) 351, 1952
BciT130I CCWGG 2 cut(s) 1199, 2789
BciVI GTATCC 2 cut(s) 575, 1394
BclI TGATCA 1 cut(s) 1419
BcnI CCSGG 1 cut(s) 1608
BcoDI GTCTC 3 cut(s) 736, 2189, 2428
BcuI ACTAGT 2 cut(s) 1046, 2008
BfaI CTAG 8 cut(s) 615, 815, 1047, 1562, 2009, 2864, 2967, 3037
BfmI CTRYAG 3 cut(s) 251, 1140, 2955
BfoI RGCGCY 2 cut(s) 8, 2898
BfrI CTTAAG 1 cut(s) 2032
BfuAI ACCTGC 1 cut(s) 258
BfuI GTATCC 2 cut(s) 575, 1394
BmcAI AGTACT 2 cut(s) 1568, 2059
Bme1390I CCNGG 3 cut(s) 1199, 1608, 2789
Bme18I GGWCC 1 cut(s) 247
BmeRI GACNNNNNGTC 1 cut(s) 253
BmgT120I GGNCC 5 cut(s) 85, 247, 488, 1670, 2269
BmiI GGNNCC 1 cut(s) 1612
BmrFI CCNGG 3 cut(s) 1199, 1608, 2789
BmrI ACTGGG 1 cut(s) 495
BmsI GCATC 4 cut(s) 620, 2410, 2745, 2980
BmuI ACTGGG 1 cut(s) 495
BpiI GAAGAC 2 cut(s) 159, 2919
BpmI CTGGAG 4 cut(s) 339, 1220, 1781, 2664
Bpu10I CCTNAGC 1 cut(s) 2832
BpuEI CTTGAG 3 cut(s) 772, 1036, 2528
BpuMI CCSGG 1 cut(s) 1608
BsaI GGTCTC 1 cut(s) 2428
BsaJI CCNNGG 6 cut(s) 772, 793, 1615, 1666, 2188, 2788
BsaWI WCCGGW 3 cut(s) 92, 496, 1750
Bsc4I CCNNNNNNNGG 8 cut(s) 232, 290, 723, 1253, 1829, 2302, 2687, 2746
Bse1I ACTGG 5 cut(s) 144, 203, 490, 1528, 1855
Bse21I CCTNAGG 1 cut(s) 455
Bse3DI GCAATG 3 cut(s) 2469, 2560, 2704
BseAI TCCGGA 2 cut(s) 496, 1750
BseBI CCWGG 2 cut(s) 1199, 2789
BseDI CCNNGG 6 cut(s) 772, 793, 1615, 1666, 2188, 2788
BseGI GGATG 7 cut(s) 183, 634, 1056, 1579, 1927, 2401, 2736
BseLI CCNNNNNNNGG 8 cut(s) 232, 290, 723, 1253, 1829, 2302, 2687, 2746
BseMI GCAATG 3 cut(s) 2469, 2560, 2704
BseMII CTCAG 7 cut(s) 299, 424, 469, 1209, 1317, 1910, 2991
BseNI ACTGG 5 cut(s) 144, 203, 490, 1528, 1855
BseRI GAGGAG 2 cut(s) 443, 2667
BseXI GCAGC 6 cut(s) 514, 770, 1132, 1518, 2267, 2949
BsgI GTGCAG 1 cut(s) 2169
Bsh1236I CGCG 3 cut(s) 959, 961, 2235
BshFI GGCC 7 cut(s) 86, 116, 490, 1185, 1672, 2270, 2354
BshNI GGYRCC 1 cut(s) 1610
BsiHKAI GWGCWC 1 cut(s) 2184
BsiSI CCGG 4 cut(s) 93, 497, 1607, 1751
BslFI GGGAC 1 cut(s) 1444
BslI CCNNNNNNNGG 8 cut(s) 232, 290, 723, 1253, 1829, 2302, 2687, 2746
BsmAI GTCTC 3 cut(s) 736, 2189, 2428
BsmFI GGGAC 1 cut(s) 1444
BsmI GAATGC 2 cut(s) 1704, 1849
BsnI GGCC 7 cut(s) 86, 116, 490, 1185, 1672, 2270, 2354
Bso31I GGTCTC 1 cut(s) 2428
Bsp1286I GDGCHC 2 cut(s) 1437, 2184
Bsp13I TCCGGA 2 cut(s) 496, 1750
Bsp1407I TGTACA 1 cut(s) 2724
Bsp143I GATC 5 cut(s) 106, 148, 1419, 2539, 2854
BspACI CCGC 8 cut(s) 223, 284, 961, 993, 1244, 1884, 1887, 2235
BspANI GGCC 7 cut(s) 86, 116, 490, 1185, 1672, 2270, 2354
BspCNI CTCAG 7 cut(s) 300, 423, 468, 1210, 1316, 1909, 2992
BspEI TCCGGA 2 cut(s) 496, 1750
BspFNI CGCG 3 cut(s) 959, 961, 2235
BspLI GGNNCC 1 cut(s) 1612
BspMAI CTGCAG 2 cut(s) 255, 2959
BspMI ACCTGC 1 cut(s) 258
BspPI GGATC 2 cut(s) 143, 2849
BspT107I GGYRCC 1 cut(s) 1610
BspTI CTTAAG 1 cut(s) 2032
BspTNI GGTCTC 1 cut(s) 2428
BsrDI GCAATG 3 cut(s) 2469, 2560, 2704
BsrGI TGTACA 1 cut(s) 2724
BsrI ACTGG 5 cut(s) 144, 203, 490, 1528, 1855
BssECI CCNNGG 6 cut(s) 772, 793, 1615, 1666, 2188, 2788
BssMI GATC 5 cut(s) 106, 148, 1419, 2539, 2854
BssT1I CCWWGG 4 cut(s) 772, 1615, 1666, 2188
Bst2UI CCWGG 2 cut(s) 1199, 2789
Bst4CI ACNGT 6 cut(s) 1406, 2291, 2537, 2729, 2797, 2976
Bst6I CTCTTC 2 cut(s) 739, 2134
BstAFI CTTAAG 1 cut(s) 2032
BstAUI TGTACA 1 cut(s) 2724
BstC8I GCNNGC 6 cut(s) 54, 442, 957, 1263, 1782, 2152
BstEII GGTNACC 1 cut(s) 235
BstENI CCTNNNNNAGG 2 cut(s) 1251, 2300
BstF5I GGATG 7 cut(s) 183, 634, 1056, 1579, 1927, 2401, 2736
BstFNI CGCG 3 cut(s) 959, 961, 2235
BstH2I RGCGCY 2 cut(s) 8, 2898
BstHHI GCGC 4 cut(s) 7, 375, 961, 2897
BstKTI GATC 5 cut(s) 109, 151, 1422, 2542, 2857
BstMAI GTCTC 3 cut(s) 736, 2189, 2428
BstMBI GATC 5 cut(s) 106, 148, 1419, 2539, 2854
BstMWI GCNNNNNNNGC 5 cut(s) 300, 372, 379, 758, 2954
BstNI CCWGG 2 cut(s) 1199, 2789
BstNSI RCATGY 8 cut(s) 56, 290, 1591, 1651, 1784, 2319, 2588, 2785
BstPI GGTNACC 1 cut(s) 235
BstSCI CCNGG 3 cut(s) 1197, 1606, 2787
BstSFI CTRYAG 3 cut(s) 251, 1140, 2955
BstUI CGCG 3 cut(s) 959, 961, 2235
BstV1I GCAGC 6 cut(s) 514, 770, 1132, 1518, 2267, 2949
BstV2I GAAGAC 2 cut(s) 159, 2919
BstXI CCANNNNNNTGG 2 cut(s) 203, 848
Bsu36I CCTNAGG 1 cut(s) 455
BsuI GTATCC 2 cut(s) 575, 1394
BsuRI GGCC 7 cut(s) 86, 116, 490, 1185, 1672, 2270, 2354
BtgZI GCGATG 1 cut(s) 2216
BtsCI GGATG 7 cut(s) 183, 634, 1056, 1579, 1927, 2401, 2736
BtsIMutI CAGTG 5 cut(s) 151, 196, 418, 1848, 2533
BveI ACCTGC 1 cut(s) 258
Cac8I GCNNGC 6 cut(s) 54, 442, 957, 1263, 1782, 2152
CfoI GCGC 4 cut(s) 7, 375, 961, 2897
Cfr13I GGNCC 5 cut(s) 85, 247, 488, 1670, 2269
Csp6I GTAC 7 cut(s) 1567, 1611, 1717, 1854, 2020, 2058, 2725
CspCI CAANNNNNGTGG 2 cut(s) 1429, 1464
CviQI GTAC 7 cut(s) 1567, 1611, 1717, 1854, 2020, 2058, 2725
DpnI GATC 5 cut(s) 108, 150, 1421, 2541, 2856
DpnII GATC 5 cut(s) 106, 148, 1419, 2539, 2854
DraIII CACNNNGTG 2 cut(s) 413, 1826
DriI GACNNNNNGTC 1 cut(s) 253
EaeI YGGCCR 1 cut(s) 1183
Eam1104I CTCTTC 2 cut(s) 739, 2134
Eam1105I GACNNNNNGTC 1 cut(s) 253
EarI CTCTTC 2 cut(s) 739, 2134
Eco130I CCWWGG 4 cut(s) 772, 1615, 1666, 2188
Eco147I AGGCCT 1 cut(s) 2354
Eco24I GRGCYC 1 cut(s) 1437
Eco31I GGTCTC 1 cut(s) 2428
Eco47I GGWCC 1 cut(s) 247
Eco47III AGCGCT 1 cut(s) 2896
Eco57I CTGAAG 2 cut(s) 322, 2393
Eco81I CCTNAGG 1 cut(s) 455
Eco91I GGTNACC 1 cut(s) 235
EcoNI CCTNNNNNAGG 2 cut(s) 1251, 2300
EcoO109I RGGNCCY 1 cut(s) 2269
EcoO65I GGTNACC 1 cut(s) 235
EcoRI GAATTC 1 cut(s) 125
EcoRII CCWGG 2 cut(s) 1197, 2787
EcoT14I CCWWGG 4 cut(s) 772, 1615, 1666, 2188
EcoT22I ATGCAT 1 cut(s) 54
EcoT38I GRGCYC 1 cut(s) 1437
ErhI CCWWGG 4 cut(s) 772, 1615, 1666, 2188
FalI AAGNNNNNCTT 2 cut(s) 1156, 1188
FaqI GGGAC 1 cut(s) 1444
FauI CCCGC 2 cut(s) 986, 1251
FbaI TGATCA 1 cut(s) 1419
FokI GGATG 7 cut(s) 170, 641, 1043, 1586, 1914, 2388, 2723
FriOI GRGCYC 1 cut(s) 1437
FspBI CTAG 8 cut(s) 615, 815, 1047, 1562, 2009, 2864, 2967, 3037
FspI TGCGCA 1 cut(s) 374
GlaI GCGC 4 cut(s) 6, 374, 960, 2896
GsuI CTGGAG 4 cut(s) 339, 1220, 1781, 2664
HaeII RGCGCY 2 cut(s) 8, 2898
HaeIII GGCC 7 cut(s) 86, 116, 490, 1185, 1672, 2270, 2354
HapII CCGG 4 cut(s) 93, 497, 1607, 1751
HhaI GCGC 4 cut(s) 7, 375, 961, 2897
Hin6I GCGC 4 cut(s) 5, 373, 959, 2895
HinP1I GCGC 4 cut(s) 5, 373, 959, 2895
HincII GTYRAC 1 cut(s) 2979
HindII GTYRAC 1 cut(s) 2979
HindIII AAGCTT 1 cut(s) 1259
HpaI GTTAAC 1 cut(s) 2979
HpaII CCGG 4 cut(s) 93, 497, 1607, 1751
HphI GGTGA 7 cut(s) 229, 428, 952, 1610, 2204, 2351, 2603
Hpy166II GTNNAC 6 cut(s) 943, 2533, 2725, 2757, 2800, 2979
Hpy8I GTNNAC 6 cut(s) 943, 2533, 2725, 2757, 2800, 2979
HpyAV CCTTC 8 cut(s) 814, 1370, 1398, 1823, 1966, 2296, 2624, 2813
HpyCH4III ACNGT 6 cut(s) 1406, 2291, 2537, 2729, 2797, 2976
HpyCH4IV ACGT 2 cut(s) 2088, 2481
HpyF10VI GCNNNNNNNGC 5 cut(s) 300, 372, 379, 758, 2954
HpySE526I ACGT 2 cut(s) 2088, 2481
HspAI GCGC 4 cut(s) 5, 373, 959, 2895
Kpn2I TCCGGA 2 cut(s) 496, 1750
KpnI GGTACC 1 cut(s) 1614
Ksp22I TGATCA 1 cut(s) 1419
KspAI GTTAAC 1 cut(s) 2979
Kzo9I GATC 5 cut(s) 106, 148, 1419, 2539, 2854
LmnI GCTCC 6 cut(s) 499, 714, 1762, 2237, 2382, 2680
Lsp1109I GCAGC 6 cut(s) 514, 770, 1132, 1518, 2267, 2949
LweI GCATC 4 cut(s) 620, 2410, 2745, 2980
MaeI CTAG 8 cut(s) 615, 815, 1047, 1562, 2009, 2864, 2967, 3037
MaeII ACGT 2 cut(s) 2088, 2481
MaeIII GTNAC 2 cut(s) 235, 2291
MalI GATC 5 cut(s) 108, 150, 1421, 2541, 2856
MboI GATC 5 cut(s) 106, 148, 1419, 2539, 2854
MfeI CAATTG 3 cut(s) 1904, 2202, 2664
MhlI GDGCHC 2 cut(s) 1437, 2184
MlyI GAGTC 3 cut(s) 168, 321, 1345
MmeI TCCRAC 7 cut(s) 225, 453, 1525, 1972, 2629, 2727, 2990
Mph1103I ATGCAT 1 cut(s) 54
MroI TCCGGA 2 cut(s) 496, 1750
MslI CAYNNNNRTG 2 cut(s) 201, 2589
MspCI CTTAAG 1 cut(s) 2032
MspI CCGG 4 cut(s) 93, 497, 1607, 1751
MspR9I CCNGG 3 cut(s) 1199, 1608, 2789
MunI CAATTG 3 cut(s) 1904, 2202, 2664
Mva1269I GAATGC 2 cut(s) 1704, 1849
MvaI CCWGG 2 cut(s) 1199, 2789
MvnI CGCG 3 cut(s) 959, 961, 2235
MwoI GCNNNNNNNGC 5 cut(s) 300, 372, 379, 758, 2954
NciI CCSGG 1 cut(s) 1608
NdeII GATC 5 cut(s) 106, 148, 1419, 2539, 2854
NlaIV GGNNCC 1 cut(s) 1612
NmeAIII GCCGAG 1 cut(s) 2284
NmuCI GTSAC 1 cut(s) 235
NsbI TGCGCA 1 cut(s) 374
NsiI ATGCAT 1 cut(s) 54
NspI RCATGY 8 cut(s) 56, 290, 1591, 1651, 1784, 2319, 2588, 2785
PaeI GCATGC 2 cut(s) 56, 1784
PceI AGGCCT 1 cut(s) 2354
PciI ACATGT 2 cut(s) 1587, 2781
PctI GAATGC 2 cut(s) 1704, 1849
PfeI GAWTC 7 cut(s) 1002, 1222, 1789, 1995, 2069, 2124, 2610
PflMI CCANNNNNTGG 1 cut(s) 2687
PleI GAGTC 3 cut(s) 167, 320, 1344
PpsI GAGTC 3 cut(s) 167, 320, 1344
PscI ACATGT 2 cut(s) 1587, 2781
PsiI TTATAA 1 cut(s) 1512
Psp1406I AACGTT 1 cut(s) 2088
Psp6I CCWGG 2 cut(s) 1197, 2787
PspEI GGTNACC 1 cut(s) 235
PspGI CCWGG 2 cut(s) 1197, 2787
PspN4I GGNNCC 1 cut(s) 1612
PspPI GGNCC 5 cut(s) 85, 247, 488, 1670, 2269
PstI CTGCAG 2 cut(s) 255, 2959
RsaI GTAC 7 cut(s) 1568, 1612, 1718, 1855, 2021, 2059, 2726
RsaNI GTAC 7 cut(s) 1567, 1611, 1717, 1854, 2020, 2058, 2725
RseI CAYNNNNRTG 2 cut(s) 201, 2589
Sau3AI GATC 5 cut(s) 106, 148, 1419, 2539, 2854
Sau96I GGNCC 5 cut(s) 85, 247, 488, 1670, 2269
ScaI AGTACT 2 cut(s) 1568, 2059
SchI GAGTC 3 cut(s) 168, 321, 1345
ScrFI CCNGG 3 cut(s) 1199, 1608, 2789
SduI GDGCHC 2 cut(s) 1437, 2184
SfaNI GCATC 4 cut(s) 620, 2410, 2745, 2980
SfcI CTRYAG 3 cut(s) 251, 1140, 2955
SinI GGWCC 1 cut(s) 247
SmiMI CAYNNNNRTG 2 cut(s) 201, 2589
SmlI CTYRAG 4 cut(s) 787, 1015, 2032, 2543
SmoI CTYRAG 4 cut(s) 787, 1015, 2032, 2543
SpeI ACTAGT 2 cut(s) 1046, 2008
SphI GCATGC 2 cut(s) 56, 1784
SseBI AGGCCT 1 cut(s) 2354
SsiI CCGC 8 cut(s) 223, 284, 961, 993, 1244, 1884, 1887, 2235
SspMI CTAG 8 cut(s) 615, 815, 1047, 1562, 2009, 2864, 2967, 3037
StuI AGGCCT 1 cut(s) 2354
StyD4I CCNGG 3 cut(s) 1197, 1606, 2787
StyI CCWWGG 4 cut(s) 772, 1615, 1666, 2188
TaaI ACNGT 6 cut(s) 1406, 2291, 2537, 2729, 2797, 2976
TaiI ACGT 2 cut(s) 2091, 2484
TaqI TCGA 6 cut(s) 109, 123, 1635, 1726, 2184, 2565
TatI WGTACW 3 cut(s) 1566, 2057, 2724
TauI GCSGC 4 cut(s) 225, 286, 1887, 1890
TfiI GAWTC 7 cut(s) 1002, 1222, 1789, 1995, 2069, 2124, 2610
TscAI CASTG 5 cut(s) 151, 203, 418, 1855, 2540
TseFI GTSAC 1 cut(s) 235
TseI GCWGC 6 cut(s) 502, 758, 1145, 1531, 2255, 2962
Tsp45I GTSAC 1 cut(s) 235
TspGWI ACGGA 1 cut(s) 1668
TspRI CASTG 5 cut(s) 151, 203, 418, 1855, 2540
Van91I CCANNNNNTGG 1 cut(s) 2687
Vha464I CTTAAG 1 cut(s) 2032
VpaK11BI GGWCC 1 cut(s) 247
XagI CCTNNNNNAGG 2 cut(s) 1251, 2300
XapI RAATTY 9 cut(s) 125, 348, 420, 475, 1330, 1549, 1602, 2077, 2100
XbaI TCTAGA 1 cut(s) 1561
XceI RCATGY 8 cut(s) 56, 290, 1591, 1651, 1784, 2319, 2588, 2785
XspI CTAG 8 cut(s) 615, 815, 1047, 1562, 2009, 2864, 2967, 3037
ZrmI AGTACT 2 cut(s) 1568, 2059
Zsp2I ATGCAT 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.